Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120045.Seq
         (818 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.               25   0.84 
AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine rece...    23   3.4  
EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.          23   4.5  
AY500239-1|AAR92109.1|  555|Apis mellifera neuronal nicotinic ac...    22   5.9  
AY398690-1|AAR83734.1|  416|Apis mellifera major royal jelly pro...    22   5.9  
AJ849455-1|CAH60991.1|  366|Apis mellifera twist protein protein.      22   5.9  
AB194707-1|BAD69622.1|  247|Apis mellifera heme oxygenase protein.     22   7.8  

>DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.
          Length = 828

 Score = 25.0 bits (52), Expect = 0.84
 Identities = 10/22 (45%), Positives = 12/22 (54%)
 Frame = +1

Query: 733 FQQWKQRLQDDCTTCQNRQSAP 798
           F+QWK  L+   TT Q R   P
Sbjct: 446 FEQWKSILESGTTTLQTRTMHP 467


>AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine
           receptor protein.
          Length = 694

 Score = 23.0 bits (47), Expect = 3.4
 Identities = 10/24 (41%), Positives = 16/24 (66%)
 Frame = -3

Query: 750 LLPLLKIFGPFLLILAALHEFYVQ 679
           ++P L +FG  L+ILA + E  +Q
Sbjct: 195 IVPCLTLFGNVLVILAVVRERALQ 218


>EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.
          Length = 684

 Score = 22.6 bits (46), Expect = 4.5
 Identities = 8/27 (29%), Positives = 18/27 (66%)
 Frame = +3

Query: 159 EKFIDNKELLKNRHAKDESGNDVKYVD 239
           E+++ + +LL NR+  +   ND+ Y++
Sbjct: 257 EEYLYSHKLLLNRYYLERLSNDLPYLE 283


>AY500239-1|AAR92109.1|  555|Apis mellifera neuronal nicotinic
           acetylcholine receptoralpha7-1 protein.
          Length = 555

 Score = 22.2 bits (45), Expect = 5.9
 Identities = 10/27 (37%), Positives = 17/27 (62%), Gaps = 2/27 (7%)
 Frame = -2

Query: 433 FGIVQNFVSHQIINNFHHRH--RHQLS 359
           F +  + VS  +I N+HHR+   H++S
Sbjct: 303 FMVASSVVSTILILNYHHRNADTHEMS 329


>AY398690-1|AAR83734.1|  416|Apis mellifera major royal jelly
           protein 8 protein.
          Length = 416

 Score = 22.2 bits (45), Expect = 5.9
 Identities = 9/28 (32%), Positives = 15/28 (53%)
 Frame = +3

Query: 630 NRRNSNVICKKCQTFKIVRKTHATRRVS 713
           +RRN  V+ K  +T + +      RR+S
Sbjct: 335 DRRNIEVVAKNKETLQAITGLKVKRRIS 362


>AJ849455-1|CAH60991.1|  366|Apis mellifera twist protein protein.
          Length = 366

 Score = 22.2 bits (45), Expect = 5.9
 Identities = 7/16 (43%), Positives = 10/16 (62%)
 Frame = -2

Query: 400 IINNFHHRHRHQLSYK 353
           I  + HH H HQ+ Y+
Sbjct: 69  IYQSHHHLHHHQVLYQ 84


>AB194707-1|BAD69622.1|  247|Apis mellifera heme oxygenase protein.
          Length = 247

 Score = 21.8 bits (44), Expect = 7.8
 Identities = 10/22 (45%), Positives = 11/22 (50%)
 Frame = -1

Query: 521 MFKIW*ISAYVYNLNNIQRTRN 456
           M KIW    Y  N NNI   +N
Sbjct: 147 MQKIWPFKEYQMNGNNITNFKN 168


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 216,607
Number of Sequences: 438
Number of extensions: 4708
Number of successful extensions: 14
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 26096055
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)