Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV120031.Seq
(726 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q06372 Cluster: 33 kDa early protein; n=12; Nucleopolyh... 165 1e-39
UniRef50_P41481 Cluster: P18 protein; n=12; Nucleopolyhedrovirus... 124 3e-27
UniRef50_Q99GW8 Cluster: ORF83; n=12; Nucleopolyhedrovirus|Rep: ... 106 5e-22
UniRef50_Q0N421 Cluster: Ac92-like protein; n=7; Nucleopolyhedro... 100 4e-20
UniRef50_Q7T9T6 Cluster: ORF_79; n=3; Granulovirus|Rep: ORF_79 -... 66 8e-10
UniRef50_Q9PYU2 Cluster: ORF101; n=7; Granulovirus|Rep: ORF101 -... 66 1e-09
UniRef50_Q0N420 Cluster: Ac93-like protein; n=3; Nucleopolyhedro... 52 1e-05
UniRef50_Q6JKD6 Cluster: P33; n=3; Nucleopolyhedrovirus|Rep: P33... 48 2e-04
UniRef50_Q0IL20 Cluster: ORF99; n=14; Nucleopolyhedrovirus|Rep: ... 36 0.77
UniRef50_A1HRZ7 Cluster: Diguanylate cyclase; n=1; Thermosinus c... 36 1.3
UniRef50_Q9ZZN7 Cluster: 30S ribosomal protein S3; n=1; Cyanidio... 35 1.8
UniRef50_Q0JQ81 Cluster: Os01g0176700 protein; n=4; Oryza sativa... 35 1.8
UniRef50_A3I202 Cluster: Putative outer membrane protein probabl... 34 4.1
UniRef50_Q6BG07 Cluster: Putative uncharacterized protein; n=1; ... 33 7.2
UniRef50_Q6BFI3 Cluster: Surface protein with furin-like cystein... 33 7.2
UniRef50_Q22XX0 Cluster: Putative uncharacterized protein; n=1; ... 33 7.2
UniRef50_Q0U9T2 Cluster: Predicted protein; n=1; Phaeosphaeria n... 33 7.2
UniRef50_Q55648 Cluster: Sll0314 protein; n=2; Synechocystis sp.... 33 9.5
UniRef50_Q4P1F7 Cluster: Putative uncharacterized protein; n=1; ... 33 9.5
>UniRef50_Q06372 Cluster: 33 kDa early protein; n=12;
Nucleopolyhedrovirus|Rep: 33 kDa early protein - Orgyia
pseudotsugata multicapsid polyhedrosis virus (OpMNPV)
Length = 282
Score = 165 bits (401), Expect = 1e-39
Identities = 73/88 (82%), Positives = 81/88 (92%)
Frame = +2
Query: 251 SSKSAHLTKLLSSQATYLYHFACLMKYKDIQKYEVQQLIEWAINASPDMDLQQFRIEFMD 430
+SKSAHLT+LLS QATYLYHFACL+KYKD+QKYEVQQLIEWA +A PD+DLQQFR+EFMD
Sbjct: 28 ASKSAHLTRLLSLQATYLYHFACLIKYKDVQKYEVQQLIEWAASAPPDIDLQQFRVEFMD 87
Query: 431 KTTELNLRSCQPKSFTYTFTTIWDTMTF 514
T ELNLRSCQPKSF YTFTTIWDT+ F
Sbjct: 88 NTAELNLRSCQPKSFMYTFTTIWDTIHF 115
Score = 137 bits (332), Expect = 2e-31
Identities = 61/72 (84%), Positives = 69/72 (95%)
Frame = +1
Query: 511 FLSLIIDDMVYTRDKSSLDFVMQQLKTMKVLFYNVFFILQCAMCRDHYMNVKGFLIYHIE 690
FLSLIIDDMV TR+KSSLDFV QQLKTMKVLFYN+FFILQCAMCRDHYMNVKG++IYHIE
Sbjct: 115 FLSLIIDDMVATREKSSLDFVAQQLKTMKVLFYNIFFILQCAMCRDHYMNVKGYIIYHIE 174
Query: 691 LIEIALDKEKYG 726
I++AL+KE+YG
Sbjct: 175 RIDVALEKERYG 186
Score = 60.5 bits (140), Expect = 4e-08
Identities = 32/45 (71%), Positives = 33/45 (73%)
Frame = +3
Query: 171 MIPLTPLFSRYKDSYLLYSFRLIDLLRALNRRTLPNCCLRKQLTY 305
MIPLTPLFSRYKDSYLLY+FRLIDLLRA L L Q TY
Sbjct: 1 MIPLTPLFSRYKDSYLLYAFRLIDLLRASKSAHLTR-LLSLQATY 44
>UniRef50_P41481 Cluster: P18 protein; n=12;
Nucleopolyhedrovirus|Rep: P18 protein - Autographa
californica nuclear polyhedrosis virus (AcMNPV)
Length = 161
Score = 124 bits (298), Expect = 3e-27
Identities = 57/57 (100%), Positives = 57/57 (100%)
Frame = -3
Query: 172 MATSKTIVLYLCQAPATASLYVSADTDADEPIIYFENITECLTDDQCDKFTYFAELK 2
MATSKTIVLYLCQAPATASLYVSADTDADEPIIYFENITECLTDDQCDKFTYFAELK
Sbjct: 1 MATSKTIVLYLCQAPATASLYVSADTDADEPIIYFENITECLTDDQCDKFTYFAELK 57
>UniRef50_Q99GW8 Cluster: ORF83; n=12; Nucleopolyhedrovirus|Rep:
ORF83 - Helicoverpa zea SNPV
Length = 254
Score = 106 bits (255), Expect = 5e-22
Identities = 50/108 (46%), Positives = 69/108 (63%), Gaps = 1/108 (0%)
Frame = +2
Query: 194 FSLQRQLFVVFVSSHRPFA-SSKSAHLTKLLSSQATYLYHFACLMKYKDIQKYEVQQLIE 370
FS R + +F + SS S L +LS + TYLYH ACL+ YKDIQ+ E+ QL E
Sbjct: 8 FSRYRDSYFLFTFRYMDLIRSSPSKELALILSKELTYLYHIACLITYKDIQEQEIDQLRE 67
Query: 371 WAINASPDMDLQQFRIEFMDKTTELNLRSCQPKSFTYTFTTIWDTMTF 514
W ++ M L+Q + EF +K +LNLR+ QPK++ YTFTTIWD++ F
Sbjct: 68 WLLSLPQTMTLEQMKTEFSNKMEQLNLRAPQPKNYAYTFTTIWDSIHF 115
Score = 93.5 bits (222), Expect = 5e-18
Identities = 40/72 (55%), Positives = 54/72 (75%)
Frame = +1
Query: 511 FLSLIIDDMVYTRDKSSLDFVMQQLKTMKVLFYNVFFILQCAMCRDHYMNVKGFLIYHIE 690
FL L+IDDMV +R+K + + Q L+ MK +FYNVFF L C MCR+HY+ +KG+LI +E
Sbjct: 115 FLCLLIDDMVESREKYDNELIRQHLRLMKPVFYNVFFKLNCPMCRNHYLTIKGYLIMQVE 174
Query: 691 LIEIALDKEKYG 726
IE+AL +EKYG
Sbjct: 175 RIEVALYREKYG 186
Score = 54.8 bits (126), Expect = 2e-06
Identities = 26/45 (57%), Positives = 34/45 (75%)
Frame = +3
Query: 171 MIPLTPLFSRYKDSYLLYSFRLIDLLRALNRRTLPNCCLRKQLTY 305
MIPLTPLFSRY+DSY L++FR +DL+R+ + L L K+LTY
Sbjct: 1 MIPLTPLFSRYRDSYFLFTFRYMDLIRSSPSKELA-LILSKELTY 44
>UniRef50_Q0N421 Cluster: Ac92-like protein; n=7;
Nucleopolyhedrovirus|Rep: Ac92-like protein - Clanis
bilineata nucleopolyhedrosis virus
Length = 252
Score = 100 bits (239), Expect = 4e-20
Identities = 42/86 (48%), Positives = 62/86 (72%)
Frame = +2
Query: 257 KSAHLTKLLSSQATYLYHFACLMKYKDIQKYEVQQLIEWAINASPDMDLQQFRIEFMDKT 436
KS HL +L+++ TYLY+ AC++ YK+IQ+ EV+QL EWA+ DL+ +I F K
Sbjct: 30 KSKHLASILATELTYLYNIACIITYKEIQELEVEQLKEWALTLDDKFDLEHMKIVFHHKM 89
Query: 437 TELNLRSCQPKSFTYTFTTIWDTMTF 514
ELNLR+ +PK+++YTFTTIW+ + F
Sbjct: 90 HELNLRAFEPKNYSYTFTTIWNVIHF 115
Score = 91.9 bits (218), Expect = 1e-17
Identities = 39/72 (54%), Positives = 53/72 (73%)
Frame = +1
Query: 511 FLSLIIDDMVYTRDKSSLDFVMQQLKTMKVLFYNVFFILQCAMCRDHYMNVKGFLIYHIE 690
FL+L DDMV R +F++ L+ +K ++YN+FF L CAMCRDHY+NVKGFLI IE
Sbjct: 115 FLALFTDDMVLNRQNLQYEFIVNHLRQLKAIYYNLFFKLDCAMCRDHYLNVKGFLIAAIE 174
Query: 691 LIEIALDKEKYG 726
IEI L++E++G
Sbjct: 175 RIEIWLNRERFG 186
Score = 46.8 bits (106), Expect = 5e-04
Identities = 22/45 (48%), Positives = 31/45 (68%)
Frame = +3
Query: 171 MIPLTPLFSRYKDSYLLYSFRLIDLLRALNRRTLPNCCLRKQLTY 305
MIPLTPL + YKDS+ L++FR +D +R L + L + L +LTY
Sbjct: 1 MIPLTPLLAEYKDSFFLFTFRHLDRMRVLKSKHLAS-ILATELTY 44
>UniRef50_Q7T9T6 Cluster: ORF_79; n=3; Granulovirus|Rep: ORF_79 -
Adoxophyes orana granulovirus (AoGV)
Length = 267
Score = 66.1 bits (154), Expect = 8e-10
Identities = 32/106 (30%), Positives = 56/106 (52%), Gaps = 1/106 (0%)
Frame = +2
Query: 194 FSLQRQLFVVFVSSHRPFAS-SKSAHLTKLLSSQATYLYHFACLMKYKDIQKYEVQQLIE 370
F +Q + +FV + S +L ++S Q +LY CL+ Y +V LI+
Sbjct: 25 FIKYKQSYALFVYRFLDLTRMAPSENLKNVISKQVQFLYELQCLLIYNKSYAEQVTILIQ 84
Query: 371 WAINASPDMDLQQFRIEFMDKTTELNLRSCQPKSFTYTFTTIWDTM 508
WA + D+ L+ F+ ++ K +L+L+ P +T+TFT IWD++
Sbjct: 85 WASHLGADIKLETFQNMYLSKLEQLDLQRLSPAHYTFTFTVIWDSI 130
Score = 56.8 bits (131), Expect = 5e-07
Identities = 29/71 (40%), Positives = 41/71 (57%)
Frame = +1
Query: 514 LSLIIDDMVYTRDKSSLDFVMQQLKTMKVLFYNVFFILQCAMCRDHYMNVKGFLIYHIEL 693
+ L+ D+++ R SLD VM + +K +FYN+F IL C +C HY+ V F Y E
Sbjct: 133 MCLVSDNIISNRQSFSLDNVMLYMSNIKWVFYNMFLILFCPICAKHYLTVNIF-AYEFEK 191
Query: 694 IEIALDKEKYG 726
IE AL +E G
Sbjct: 192 IETALYREIMG 202
>UniRef50_Q9PYU2 Cluster: ORF101; n=7; Granulovirus|Rep: ORF101 -
Xestia c-nigrum granulosis virus (XnGV) (Xestia
c-nigrumgranulovirus)
Length = 251
Score = 65.7 bits (153), Expect = 1e-09
Identities = 26/80 (32%), Positives = 47/80 (58%)
Frame = +2
Query: 269 LTKLLSSQATYLYHFACLMKYKDIQKYEVQQLIEWAINASPDMDLQQFRIEFMDKTTELN 448
L LL S+ +LYH C++ YK+ + +V L++W + D+ L+ + +++K EL
Sbjct: 34 LKNLLYSEVRFLYHLNCVIVYKETRSTDVDALLQWFQSLDADLKLEDIKNLYINKLQELK 93
Query: 449 LRSCQPKSFTYTFTTIWDTM 508
L P+ + ++FTTIWD +
Sbjct: 94 LSQLDPQKYLFSFTTIWDAI 113
Score = 60.1 bits (139), Expect = 5e-08
Identities = 31/71 (43%), Positives = 43/71 (60%)
Frame = +1
Query: 514 LSLIIDDMVYTRDKSSLDFVMQQLKTMKVLFYNVFFILQCAMCRDHYMNVKGFLIYHIEL 693
++ + DDMV RD+ + VM K +K +FYN+F IL C C H++ V F Y IE
Sbjct: 116 MAYVGDDMVTKRDQLPHESVMAFFKNLKWVFYNIFIILFCPKCARHFLTVDVF-PYEIER 174
Query: 694 IEIALDKEKYG 726
IE+AL +EK G
Sbjct: 175 IEVALYREKLG 185
Score = 35.1 bits (77), Expect = 1.8
Identities = 14/36 (38%), Positives = 23/36 (63%)
Frame = +3
Query: 171 MIPLTPLFSRYKDSYLLYSFRLIDLLRALNRRTLPN 278
M+ TPL RY +S+ L++FR++D++R L N
Sbjct: 1 MLTYTPLVKRYINSFQLFNFRMLDMIRVAPAEKLKN 36
>UniRef50_Q0N420 Cluster: Ac93-like protein; n=3;
Nucleopolyhedrovirus|Rep: Ac93-like protein - Clanis
bilineata nucleopolyhedrosis virus
Length = 171
Score = 52.4 bits (120), Expect = 1e-05
Identities = 25/58 (43%), Positives = 33/58 (56%)
Frame = -3
Query: 175 IMATSKTIVLYLCQAPATASLYVSADTDADEPIIYFENITECLTDDQCDKFTYFAELK 2
I TI LYLC P + D D+ ++YFE+I EC D+ CDKF++FA LK
Sbjct: 15 IQPQQHTIYLYLCDMPVG----LQNDKLDDDNVLYFESIIECFDDESCDKFSFFAALK 68
>UniRef50_Q6JKD6 Cluster: P33; n=3; Nucleopolyhedrovirus|Rep: P33 -
Neodiprion sertifer NPV
Length = 252
Score = 48.4 bits (110), Expect = 2e-04
Identities = 22/71 (30%), Positives = 41/71 (57%)
Frame = +1
Query: 514 LSLIIDDMVYTRDKSSLDFVMQQLKTMKVLFYNVFFILQCAMCRDHYMNVKGFLIYHIEL 693
LS ++DD+V R K V +++ + L N++ L C++C +HY+ V+G L+ IE
Sbjct: 109 LSFVVDDIVSKRHKYDYKLVDNKIQNLYRLIANIYVKLGCSVCVEHYLLVRGMLLEPIER 168
Query: 694 IEIALDKEKYG 726
+ +++ E G
Sbjct: 169 LRVSMLLEYRG 179
>UniRef50_Q0IL20 Cluster: ORF99; n=14; Nucleopolyhedrovirus|Rep:
ORF99 - Leucania separata nuclear polyhedrosis virus
(LsNPV)
Length = 168
Score = 36.3 bits (80), Expect = 0.77
Identities = 15/29 (51%), Positives = 19/29 (65%)
Frame = -3
Query: 88 DEPIIYFENITECLTDDQCDKFTYFAELK 2
D +IYFE I E LT+ CDK + F E+K
Sbjct: 34 DCDVIYFEGIIESLTNSSCDKLSCFVEMK 62
>UniRef50_A1HRZ7 Cluster: Diguanylate cyclase; n=1; Thermosinus
carboxydivorans Nor1|Rep: Diguanylate cyclase -
Thermosinus carboxydivorans Nor1
Length = 794
Score = 35.5 bits (78), Expect = 1.3
Identities = 29/91 (31%), Positives = 43/91 (47%), Gaps = 2/91 (2%)
Frame = +2
Query: 149 HDRFASRHDTADAAFFSLQRQLFVVFVSSHRPFASSKSAHLTKLLSSQATYLYHFACLMK 328
H SR+ A FS L +F SSH PF + SAHL K+LS F +++
Sbjct: 204 HPNHVSRNFLQMALIFSFLADLSYLF-SSHTPFVLNVSAHLCKVLSYYYLQRAIFVVVIQ 262
Query: 329 --YKDIQKYEVQQLIEWAINASPDMDLQQFR 415
Y++I K++ + A NA + +Q R
Sbjct: 263 NPYEEIMKFKDEMEKLAANNAKLYQESEQQR 293
>UniRef50_Q9ZZN7 Cluster: 30S ribosomal protein S3; n=1;
Cyanidioschyzon merolae|Rep: 30S ribosomal protein S3 -
Cyanidioschyzon merolae (Red alga)
Length = 282
Score = 35.1 bits (77), Expect = 1.8
Identities = 24/93 (25%), Positives = 41/93 (44%)
Frame = +1
Query: 409 VSHRIYGQNHRTQFAFVPAQEFYLHVYHHMGHHDFLSLIIDDMVYTRDKSSLDFVMQQLK 588
+SH+I +N+R + F ++Y H ++ + +FL + Y +F+
Sbjct: 1 MSHKIRPENYRLGYLFDWKNDWYTH---NINYSNFLIKNLKISEYLNRILYKNFLFLGDL 57
Query: 589 TMKVLFYNVFFILQCAMCRDHYMNVKGFLIYHI 687
T+K V L C C+D Y N LI H+
Sbjct: 58 TLKSNALKVLISLTCYPCKDSYKNTNWDLINHL 90
>UniRef50_Q0JQ81 Cluster: Os01g0176700 protein; n=4; Oryza
sativa|Rep: Os01g0176700 protein - Oryza sativa subsp.
japonica (Rice)
Length = 477
Score = 35.1 bits (77), Expect = 1.8
Identities = 17/50 (34%), Positives = 25/50 (50%), Gaps = 3/50 (6%)
Frame = +1
Query: 388 PRHGLATVSHRIYGQNHRTQ---FAFVPAQEFYLHVYHHMGHHDFLSLII 528
P + IYG + TQ A V AQE+Y H +HH+ HH + ++
Sbjct: 319 PEYATQAAGPAIYGAHPATQPHYTAAVAAQEYYHHHHHHLQHHPAAAALV 368
>UniRef50_A3I202 Cluster: Putative outer membrane protein probably
involved in nutrient binding; n=1; Algoriphagus sp.
PR1|Rep: Putative outer membrane protein probably
involved in nutrient binding - Algoriphagus sp. PR1
Length = 799
Score = 33.9 bits (74), Expect = 4.1
Identities = 14/58 (24%), Positives = 27/58 (46%)
Frame = +2
Query: 365 IEWAINASPDMDLQQFRIEFMDKTTELNLRSCQPKSFTYTFTTIWDTMTFSVSSSTIW 538
I W + A + DL+ + F D ++ + FTY++ T +D F+ ++ W
Sbjct: 285 INWFLGALKNPDLKNSQANFYDGNLVISAPVSEKNEFTYSYYTSYDDFAFASDTTVSW 342
>UniRef50_Q6BG07 Cluster: Putative uncharacterized protein; n=1;
Paramecium tetraurelia|Rep: Putative uncharacterized
protein - Paramecium tetraurelia
Length = 2954
Score = 33.1 bits (72), Expect = 7.2
Identities = 13/51 (25%), Positives = 28/51 (54%)
Frame = +2
Query: 329 YKDIQKYEVQQLIEWAINASPDMDLQQFRIEFMDKTTELNLRSCQPKSFTY 481
++D K++++ ++ +N++ D +Q+ + F K E+ SC SF Y
Sbjct: 812 HEDFWKWDIKAFYKYFVNSNEDHYFEQYGLNFNTKNFEIVCTSCFSDSFLY 862
>UniRef50_Q6BFI3 Cluster: Surface protein with furin-like cysteine
repeats, putative; n=2; Paramecium tetraurelia|Rep:
Surface protein with furin-like cysteine repeats,
putative - Paramecium tetraurelia
Length = 2993
Score = 33.1 bits (72), Expect = 7.2
Identities = 14/46 (30%), Positives = 24/46 (52%)
Frame = +2
Query: 326 KYKDIQKYEVQQLIEWAINASPDMDLQQFRIEFMDKTTELNLRSCQ 463
KYKD K+E++ + IN + + + ++ D E+N SCQ
Sbjct: 854 KYKDYWKWEIKAFYSYFINQNGQHPFETYVVDSDDSEQEINCLSCQ 899
>UniRef50_Q22XX0 Cluster: Putative uncharacterized protein; n=1;
Tetrahymena thermophila SB210|Rep: Putative
uncharacterized protein - Tetrahymena thermophila SB210
Length = 1197
Score = 33.1 bits (72), Expect = 7.2
Identities = 29/94 (30%), Positives = 45/94 (47%), Gaps = 4/94 (4%)
Frame = +2
Query: 203 QRQLFVVFVSSHRPFASSKSAHLTKLLSSQ-ATYLYHFA---CLMKYKDIQKYEVQQLIE 370
++QL + +VS ++P S HL KL + Q +T L F L K DI Y+V +L+
Sbjct: 825 RQQLQIYYVSKYQP--SQNLQHLRKLPAFQLSTPLKPFGEEHNLQKISDINLYKVIELMN 882
Query: 371 WAINASPDMDLQQFRIEFMDKTTELNLRSCQPKS 472
+ S L Q + +DK T + P+S
Sbjct: 883 YPQTLSDTTFLDQIKYCIIDKYTAIPYLLLYPQS 916
>UniRef50_Q0U9T2 Cluster: Predicted protein; n=1; Phaeosphaeria
nodorum|Rep: Predicted protein - Phaeosphaeria nodorum
(Septoria nodorum)
Length = 538
Score = 33.1 bits (72), Expect = 7.2
Identities = 15/36 (41%), Positives = 21/36 (58%)
Frame = -3
Query: 142 LCQAPATASLYVSADTDADEPIIYFENITECLTDDQ 35
LCQAP SLY + D + E I Y++ I E +D+
Sbjct: 201 LCQAPGRMSLYKTFDGEQPECIPYYDKILEKFKEDE 236
>UniRef50_Q55648 Cluster: Sll0314 protein; n=2; Synechocystis sp.
PCC 6803|Rep: Sll0314 protein - Synechocystis sp.
(strain PCC 6803)
Length = 314
Score = 32.7 bits (71), Expect = 9.5
Identities = 27/103 (26%), Positives = 50/103 (48%), Gaps = 2/103 (1%)
Frame = +2
Query: 125 GRRLTQIQHDRFASRHDTADAAFFSLQRQLFVVFVSSHRPFASSKSAHLTKLLSSQATYL 304
G+ T +H AS + D +L R +F+S + PF+ S+ + YL
Sbjct: 152 GKTGTVFEHLDKASAINPNDPEL-NLLRGYLDLFLSRYTPFSQSEQVISRFEQYAAPDYL 210
Query: 305 YHFACLMKYKDIQKYEVQQL-IEWAINASPD-MDLQQFRIEFM 427
+ A Y+D++KY++ I+ A+ +PD +LQ + +F+
Sbjct: 211 RYRALATTYRDLEKYDLAMANIDRALAITPDNPELQYLKGQFL 253
>UniRef50_Q4P1F7 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 880
Score = 32.7 bits (71), Expect = 9.5
Identities = 24/59 (40%), Positives = 34/59 (57%), Gaps = 2/59 (3%)
Frame = +2
Query: 128 RRLTQIQHDRFASRHDTADAAFFSLQRQLFVVFVSSHRPFASSKSAH--LTKLLSSQAT 298
RRLT++ ASR+ A L ++L +SS RPF+S S++ LTK SSQA+
Sbjct: 304 RRLTRVA----ASRNGAMGATIAELTKKLGQQSISSPRPFSSRSSSNTSLTKSSSSQAS 358
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 708,649,765
Number of Sequences: 1657284
Number of extensions: 14126639
Number of successful extensions: 37672
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 36251
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 37638
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 59090914597
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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