Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV120028.Seq
(721 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_10439| Best HMM Match : Metallothio_7 (HMM E-Value=3.6) 34 0.13
SB_19175| Best HMM Match : 7tm_1 (HMM E-Value=4.2e-05) 32 0.41
SB_18951| Best HMM Match : EGF (HMM E-Value=2.1e-06) 31 0.71
SB_9009| Best HMM Match : Peptidase_C1 (HMM E-Value=5.9e-40) 31 0.94
SB_49461| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.6
SB_55161| Best HMM Match : Kunitz_BPTI (HMM E-Value=6.3) 29 3.8
SB_17743| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.8
SB_15426| Best HMM Match : Kunitz_BPTI (HMM E-Value=4.6) 29 3.8
SB_2503| Best HMM Match : Kunitz_BPTI (HMM E-Value=4.6) 29 3.8
SB_49235| Best HMM Match : Peptidase_C1 (HMM E-Value=7.5e-07) 29 5.0
SB_51097| Best HMM Match : Peptidase_C1 (HMM E-Value=9.3e-07) 29 5.0
SB_42540| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.0
SB_40986| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.0
SB_54597| Best HMM Match : zf-B_box (HMM E-Value=4e-17) 28 6.6
SB_17477| Best HMM Match : PSI (HMM E-Value=1.7) 28 8.8
SB_53570| Best HMM Match : Y_phosphatase (HMM E-Value=0) 28 8.8
>SB_10439| Best HMM Match : Metallothio_7 (HMM E-Value=3.6)
Length = 288
Score = 33.9 bits (74), Expect = 0.13
Identities = 16/30 (53%), Positives = 18/30 (60%), Gaps = 1/30 (3%)
Frame = -3
Query: 236 CARICT*N-CACCI*MNPI*RCATIVGRLC 150
CAR T N CACC+ MN RC T+ G C
Sbjct: 244 CARCVTMNGCACCVTMNGYPRCVTMNGCAC 273
Score = 29.1 bits (62), Expect = 3.8
Identities = 15/30 (50%), Positives = 17/30 (56%), Gaps = 1/30 (3%)
Frame = -3
Query: 236 CARICT*N-CACCI*MNPI*RCATIVGRLC 150
CAR T N CA C+ MN RC T+ G C
Sbjct: 226 CARCVTMNGCARCVTMNGCARCVTMNGCAC 255
>SB_19175| Best HMM Match : 7tm_1 (HMM E-Value=4.2e-05)
Length = 431
Score = 32.3 bits (70), Expect = 0.41
Identities = 25/84 (29%), Positives = 42/84 (50%), Gaps = 5/84 (5%)
Frame = +1
Query: 235 QRHERKIYNVIDFCKGLEIAHDDILDCNWDSDQVYH--LNEIIFHKQKSKRDLNSLGALF 408
QR ER + + F L + + + W +D+ H L++I F + + +N + LF
Sbjct: 286 QRRERDLAKTLFFVTALSVLAW-VPNAVWTADKGDHSILDKIAFCGRFANSFINPIVYLF 344
Query: 409 ATK---QGLLKILMRLNFDNKSNA 471
K +GLLKI R + D +SN+
Sbjct: 345 QMKDFREGLLKICRRTDLDGRSNS 368
>SB_18951| Best HMM Match : EGF (HMM E-Value=2.1e-06)
Length = 1223
Score = 31.5 bits (68), Expect = 0.71
Identities = 19/61 (31%), Positives = 30/61 (49%)
Frame = +1
Query: 262 VIDFCKGLEIAHDDILDCNWDSDQVYHLNEIIFHKQKSKRDLNSLGALFATKQGLLKILM 441
V+ FC G +H D L C W S + Y+ + F +K+K D L +F T + ++
Sbjct: 702 VVKFCNGKSSSHVDPLQCFWLS-RDYYDGVVDFFLKKTKED--HLNVVFLTPRTRAMVIC 758
Query: 442 R 444
R
Sbjct: 759 R 759
>SB_9009| Best HMM Match : Peptidase_C1 (HMM E-Value=5.9e-40)
Length = 251
Score = 31.1 bits (67), Expect = 0.94
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = +1
Query: 274 CKGLEIAHDDILDCNWDSDQVYHLN 348
C+ L +A +LDC W + VYH N
Sbjct: 43 CELLNLAEQQLLDCTWSTPGVYHGN 67
>SB_49461| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 257
Score = 30.3 bits (65), Expect = 1.6
Identities = 10/22 (45%), Positives = 14/22 (63%)
Frame = +1
Query: 283 LEIAHDDILDCNWDSDQVYHLN 348
L +A +LDC W + +VYH N
Sbjct: 40 LNLAEQQLLDCTWSTPEVYHGN 61
>SB_55161| Best HMM Match : Kunitz_BPTI (HMM E-Value=6.3)
Length = 260
Score = 29.1 bits (62), Expect = 3.8
Identities = 15/30 (50%), Positives = 17/30 (56%), Gaps = 1/30 (3%)
Frame = -3
Query: 236 CARICT*N-CACCI*MNPI*RCATIVGRLC 150
CAR T N CA C+ MN RC T+ G C
Sbjct: 216 CARCVTMNGCARCVTMNGYPRCVTMNGCTC 245
>SB_17743| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 260
Score = 29.1 bits (62), Expect = 3.8
Identities = 15/30 (50%), Positives = 17/30 (56%), Gaps = 1/30 (3%)
Frame = -3
Query: 236 CARICT*N-CACCI*MNPI*RCATIVGRLC 150
CAR T N CA C+ MN RC T+ G C
Sbjct: 216 CARCVTMNGCARCVTMNGCPRCVTMNGCTC 245
Score = 27.9 bits (59), Expect = 8.8
Identities = 13/32 (40%), Positives = 17/32 (53%)
Frame = -3
Query: 254 ILRSCRCARICT*NCACCI*MNPI*RCATIVG 159
+ R RC + CACC+ MN RC T+ G
Sbjct: 168 VTRKKRCVTMN--GCACCVTMNGCSRCVTMNG 197
Score = 27.9 bits (59), Expect = 8.8
Identities = 14/27 (51%), Positives = 16/27 (59%), Gaps = 1/27 (3%)
Frame = -3
Query: 236 CARICT*N-CACCI*MNPI*RCATIVG 159
C+R T N CA C+ MN RC TI G
Sbjct: 189 CSRCVTMNGCARCVTMNGCARCVTIYG 215
>SB_15426| Best HMM Match : Kunitz_BPTI (HMM E-Value=4.6)
Length = 224
Score = 29.1 bits (62), Expect = 3.8
Identities = 15/27 (55%), Positives = 16/27 (59%), Gaps = 1/27 (3%)
Frame = -3
Query: 236 CARICT*N-CACCI*MNPI*RCATIVG 159
CAR T N CA C+ MN RC TI G
Sbjct: 189 CARCVTMNGCARCVTMNGCARCVTIYG 215
Score = 27.9 bits (59), Expect = 8.8
Identities = 13/32 (40%), Positives = 17/32 (53%)
Frame = -3
Query: 254 ILRSCRCARICT*NCACCI*MNPI*RCATIVG 159
+ R RC + CACC+ MN RC T+ G
Sbjct: 168 VTRGKRCVTMN--GCACCVTMNGCARCVTMNG 197
>SB_2503| Best HMM Match : Kunitz_BPTI (HMM E-Value=4.6)
Length = 224
Score = 29.1 bits (62), Expect = 3.8
Identities = 15/27 (55%), Positives = 16/27 (59%), Gaps = 1/27 (3%)
Frame = -3
Query: 236 CARICT*N-CACCI*MNPI*RCATIVG 159
CAR T N CA C+ MN RC TI G
Sbjct: 189 CARCVTMNGCARCVTMNGCARCVTIYG 215
Score = 27.9 bits (59), Expect = 8.8
Identities = 13/32 (40%), Positives = 17/32 (53%)
Frame = -3
Query: 254 ILRSCRCARICT*NCACCI*MNPI*RCATIVG 159
+ R RC + CACC+ MN RC T+ G
Sbjct: 168 VTRGKRCVTMN--GCACCVTMNGCARCVTMNG 197
>SB_49235| Best HMM Match : Peptidase_C1 (HMM E-Value=7.5e-07)
Length = 122
Score = 28.7 bits (61), Expect = 5.0
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = +1
Query: 283 LEIAHDDILDCNWDSDQVYHLN 348
L +A +LDC W + VYH N
Sbjct: 5 LNLAEQQLLDCTWSTPGVYHGN 26
>SB_51097| Best HMM Match : Peptidase_C1 (HMM E-Value=9.3e-07)
Length = 122
Score = 28.7 bits (61), Expect = 5.0
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = +1
Query: 283 LEIAHDDILDCNWDSDQVYHLN 348
L +A +LDC W + VYH N
Sbjct: 5 LNLAEQQLLDCTWSTPGVYHGN 26
>SB_42540| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1471
Score = 28.7 bits (61), Expect = 5.0
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = +1
Query: 283 LEIAHDDILDCNWDSDQVYHLN 348
L +A +LDC W + VYH N
Sbjct: 189 LNLAEQQLLDCTWSTPGVYHGN 210
>SB_40986| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 118
Score = 28.7 bits (61), Expect = 5.0
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = +1
Query: 283 LEIAHDDILDCNWDSDQVYHLN 348
L +A +LDC W + VYH N
Sbjct: 65 LNLAEQQLLDCTWSTPGVYHGN 86
>SB_54597| Best HMM Match : zf-B_box (HMM E-Value=4e-17)
Length = 755
Score = 28.3 bits (60), Expect = 6.6
Identities = 15/27 (55%), Positives = 16/27 (59%), Gaps = 1/27 (3%)
Frame = -3
Query: 236 CARICT*N-CACCI*MNPI*RCATIVG 159
CAR T N CA C+ MN RC TI G
Sbjct: 702 CARCVTMNGCARCVTMNGCARCVTING 728
>SB_17477| Best HMM Match : PSI (HMM E-Value=1.7)
Length = 206
Score = 27.9 bits (59), Expect = 8.8
Identities = 13/32 (40%), Positives = 17/32 (53%)
Frame = -3
Query: 254 ILRSCRCARICT*NCACCI*MNPI*RCATIVG 159
+ R RC + CACC+ MN RC T+ G
Sbjct: 96 VTRGKRCVTMN--GCACCVTMNGCSRCVTMNG 125
Score = 27.9 bits (59), Expect = 8.8
Identities = 14/27 (51%), Positives = 16/27 (59%), Gaps = 1/27 (3%)
Frame = -3
Query: 236 CARICT*N-CACCI*MNPI*RCATIVG 159
C+R T N CA C+ MN RC TI G
Sbjct: 117 CSRCVTMNGCARCVTMNGCARCVTIYG 143
Score = 27.9 bits (59), Expect = 8.8
Identities = 14/27 (51%), Positives = 15/27 (55%), Gaps = 1/27 (3%)
Frame = -3
Query: 236 CARICT*N-CACCI*MNPI*RCATIVG 159
CAR T N C CC+ MN C TI G
Sbjct: 171 CARCVTMNGCLCCVTMNGCTCCVTING 197
>SB_53570| Best HMM Match : Y_phosphatase (HMM E-Value=0)
Length = 2064
Score = 27.9 bits (59), Expect = 8.8
Identities = 16/67 (23%), Positives = 28/67 (41%)
Frame = +1
Query: 307 LDCNWDSDQVYHLNEIIFHKQKSKRDLNSLGALFATKQGLLKILMRLNFDNKSNALLHLQ 486
L+ +WD + H N +I H R GA + T ++ N D +N + +Q
Sbjct: 655 LEISWDPPRPEHRNGLITHFTIKYRAKGQRGAKYLTVDATKTSVVLHNLDKFTNYFIWVQ 714
Query: 487 TEGERDD 507
++ D
Sbjct: 715 ASTKQGD 721
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,001,277
Number of Sequences: 59808
Number of extensions: 358854
Number of successful extensions: 1025
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 937
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1018
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1913853903
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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