Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV120027.Seq
(774 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U70856-4|AAB09167.1| 2090|Caenorhabditis elegans Hypothetical pr... 29 3.7
U70856-3|AAB09166.1| 2153|Caenorhabditis elegans Gei-4(four) int... 29 3.7
U23168-1|AAU87832.1| 7548|Caenorhabditis elegans Temporarily ass... 29 3.7
Z50176-4|CAA90541.1| 546|Caenorhabditis elegans Hypothetical pr... 28 6.4
AF188477-1|AAF01458.1| 1418|Caenorhabditis elegans phospholipase... 28 6.4
AF179426-1|AAF05701.1| 1431|Caenorhabditis elegans phospholipase... 28 6.4
AF068714-7|AAT68905.1| 592|Caenorhabditis elegans Egg laying de... 28 6.4
AF068714-6|AAL77167.1| 1419|Caenorhabditis elegans Egg laying de... 28 6.4
AF068714-5|AAL77168.1| 1431|Caenorhabditis elegans Egg laying de... 28 6.4
AF016426-2|AAB65345.1| 335|Caenorhabditis elegans Hypothetical ... 28 6.4
>U70856-4|AAB09167.1| 2090|Caenorhabditis elegans Hypothetical protein
F57F4.4 protein.
Length = 2090
Score = 29.1 bits (62), Expect = 3.7
Identities = 13/34 (38%), Positives = 16/34 (47%)
Frame = +2
Query: 20 FCESNHEFDLDSASCKPIVYDRTGSGCAARMYRN 121
FC +D CKP+ YD T +GC Y N
Sbjct: 1536 FCRQLEMYD----ECKPLPYDTTVTGCCCDNYNN 1565
>U70856-3|AAB09166.1| 2153|Caenorhabditis elegans Gei-4(four)
interacting proteinprotein 1 protein.
Length = 2153
Score = 29.1 bits (62), Expect = 3.7
Identities = 13/34 (38%), Positives = 16/34 (47%)
Frame = +2
Query: 20 FCESNHEFDLDSASCKPIVYDRTGSGCAARMYRN 121
FC +D CKP+ YD T +GC Y N
Sbjct: 1536 FCRQLEMYD----ECKPLPYDTTVTGCCCDNYNN 1565
>U23168-1|AAU87832.1| 7548|Caenorhabditis elegans Temporarily assigned
gene nameprotein 308, isoform c protein.
Length = 7548
Score = 29.1 bits (62), Expect = 3.7
Identities = 15/50 (30%), Positives = 23/50 (46%)
Frame = +3
Query: 375 QPNDYLNYYNNPTPDGADTVVSDSETAAASNFLASVNSLTDDNDIWNVCS 524
Q + +YY P P A+T ++S A S L +T + IW+ S
Sbjct: 4063 QVDSKYDYYRRPAPKNAETTFTESNADAFSLALQEAGEVT-SSGIWSTVS 4111
>Z50176-4|CAA90541.1| 546|Caenorhabditis elegans Hypothetical
protein C09G1.4 protein.
Length = 546
Score = 28.3 bits (60), Expect = 6.4
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = -2
Query: 662 GWFTPTDCSKDSAL*AELGDGSPQQAA 582
G+ TP D DS + A+ GSP+ AA
Sbjct: 28 GYLTPQDSDTDSGISADCDQGSPRAAA 54
>AF188477-1|AAF01458.1| 1418|Caenorhabditis elegans phospholipase C
beta protein.
Length = 1418
Score = 28.3 bits (60), Expect = 6.4
Identities = 15/42 (35%), Positives = 22/42 (52%), Gaps = 3/42 (7%)
Frame = -3
Query: 283 VIVVWLFTIVRRQCQLAKKCRAHHKDI---DIFKHLCPELQI 167
++ V F +V +LAK CRA DI +H+CP Q+
Sbjct: 105 LVNVQSFFLVAESVELAKTCRAGINDILKSSRIRHVCPTTQL 146
>AF179426-1|AAF05701.1| 1431|Caenorhabditis elegans phospholipase C
beta homolog EGL-8 protein.
Length = 1431
Score = 28.3 bits (60), Expect = 6.4
Identities = 15/42 (35%), Positives = 22/42 (52%), Gaps = 3/42 (7%)
Frame = -3
Query: 283 VIVVWLFTIVRRQCQLAKKCRAHHKDI---DIFKHLCPELQI 167
++ V F +V +LAK CRA DI +H+CP Q+
Sbjct: 105 LVNVQSFFLVAESVELAKTCRAGINDILKSSRIRHVCPTTQL 146
>AF068714-7|AAT68905.1| 592|Caenorhabditis elegans Egg laying
defective protein 8,isoform c protein.
Length = 592
Score = 28.3 bits (60), Expect = 6.4
Identities = 15/42 (35%), Positives = 22/42 (52%), Gaps = 3/42 (7%)
Frame = -3
Query: 283 VIVVWLFTIVRRQCQLAKKCRAHHKDI---DIFKHLCPELQI 167
++ V F +V +LAK CRA DI +H+CP Q+
Sbjct: 105 LVNVQSFFLVAESVELAKTCRAGINDILKSSRIRHVCPTTQL 146
>AF068714-6|AAL77167.1| 1419|Caenorhabditis elegans Egg laying
defective protein 8,isoform a protein.
Length = 1419
Score = 28.3 bits (60), Expect = 6.4
Identities = 15/42 (35%), Positives = 22/42 (52%), Gaps = 3/42 (7%)
Frame = -3
Query: 283 VIVVWLFTIVRRQCQLAKKCRAHHKDI---DIFKHLCPELQI 167
++ V F +V +LAK CRA DI +H+CP Q+
Sbjct: 105 LVNVQSFFLVAESVELAKTCRAGINDILKSSRIRHVCPTTQL 146
>AF068714-5|AAL77168.1| 1431|Caenorhabditis elegans Egg laying
defective protein 8,isoform b protein.
Length = 1431
Score = 28.3 bits (60), Expect = 6.4
Identities = 15/42 (35%), Positives = 22/42 (52%), Gaps = 3/42 (7%)
Frame = -3
Query: 283 VIVVWLFTIVRRQCQLAKKCRAHHKDI---DIFKHLCPELQI 167
++ V F +V +LAK CRA DI +H+CP Q+
Sbjct: 105 LVNVQSFFLVAESVELAKTCRAGINDILKSSRIRHVCPTTQL 146
>AF016426-2|AAB65345.1| 335|Caenorhabditis elegans Hypothetical
protein W07B8.4 protein.
Length = 335
Score = 28.3 bits (60), Expect = 6.4
Identities = 12/31 (38%), Positives = 17/31 (54%), Gaps = 1/31 (3%)
Frame = -2
Query: 122 SFYTCEPHTRCPCDRTR*ACSWPS-PSRIRD 33
S Y C+P++ PC T +WP P +I D
Sbjct: 170 SQYGCKPYSIAPCGETIDGVTWPECPMKISD 200
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,659,412
Number of Sequences: 27780
Number of extensions: 375185
Number of successful extensions: 1115
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1058
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1115
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1861650246
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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