Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV120024.Seq
(770 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 24 1.8
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 24 1.8
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 24 1.8
L10710-1|AAA27730.1| 382|Apis mellifera hyaluronidase protein. 23 2.4
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 23 2.4
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 23 2.4
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 23 2.4
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 23 2.4
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 23 2.4
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. 22 5.5
AF388659-1|AAK71995.1| 782|Apis mellifera 1D-myo-inositol-trisp... 21 9.6
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 23.8 bits (49), Expect = 1.8
Identities = 11/29 (37%), Positives = 16/29 (55%), Gaps = 1/29 (3%)
Frame = -1
Query: 299 LWKPDLVM-KFCSLQVDQTNNIEVVISHH 216
LWKPD++M D T VV++H+
Sbjct: 68 LWKPDILMYNSADEGFDGTYQTSVVVTHN 96
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 23.8 bits (49), Expect = 1.8
Identities = 11/29 (37%), Positives = 16/29 (55%), Gaps = 1/29 (3%)
Frame = -1
Query: 299 LWKPDLVM-KFCSLQVDQTNNIEVVISHH 216
LWKPD++M D T VV++H+
Sbjct: 136 LWKPDILMYNSADEGFDGTYQTNVVVTHN 164
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 23.8 bits (49), Expect = 1.8
Identities = 11/29 (37%), Positives = 16/29 (55%), Gaps = 1/29 (3%)
Frame = -1
Query: 299 LWKPDLVM-KFCSLQVDQTNNIEVVISHH 216
LWKPD++M D T VV++H+
Sbjct: 136 LWKPDILMYNSADEGFDGTYQTNVVVTHN 164
>L10710-1|AAA27730.1| 382|Apis mellifera hyaluronidase protein.
Length = 382
Score = 23.4 bits (48), Expect = 2.4
Identities = 10/28 (35%), Positives = 15/28 (53%)
Frame = -1
Query: 296 WKPDLVMKFCSLQVDQTNNIEVVISHHP 213
W+P + SLQ + ++EVV HP
Sbjct: 147 WRPIFRQNWASLQPYKKLSVEVVRREHP 174
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 23.4 bits (48), Expect = 2.4
Identities = 11/28 (39%), Positives = 15/28 (53%), Gaps = 1/28 (3%)
Frame = -1
Query: 299 LWKPDLVM-KFCSLQVDQTNNIEVVISH 219
LWKPD++M D T VV++H
Sbjct: 68 LWKPDILMYNSADEGFDGTYQTSVVVTH 95
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 23.4 bits (48), Expect = 2.4
Identities = 11/28 (39%), Positives = 15/28 (53%), Gaps = 1/28 (3%)
Frame = -1
Query: 299 LWKPDLVM-KFCSLQVDQTNNIEVVISH 219
LWKPD++M D T VV++H
Sbjct: 68 LWKPDILMYNSADEGFDGTYQTSVVVTH 95
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 23.4 bits (48), Expect = 2.4
Identities = 11/28 (39%), Positives = 15/28 (53%), Gaps = 1/28 (3%)
Frame = -1
Query: 299 LWKPDLVM-KFCSLQVDQTNNIEVVISH 219
LWKPD++M D T VV++H
Sbjct: 68 LWKPDILMYNSADEGFDGTYQTSVVVTH 95
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 23.4 bits (48), Expect = 2.4
Identities = 11/28 (39%), Positives = 15/28 (53%), Gaps = 1/28 (3%)
Frame = -1
Query: 299 LWKPDLVM-KFCSLQVDQTNNIEVVISH 219
LWKPD++M D T VV++H
Sbjct: 68 LWKPDILMYNSADEGFDGTYQTSVVVTH 95
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 23.4 bits (48), Expect = 2.4
Identities = 11/28 (39%), Positives = 15/28 (53%), Gaps = 1/28 (3%)
Frame = -1
Query: 299 LWKPDLVM-KFCSLQVDQTNNIEVVISH 219
LWKPD++M D T VV++H
Sbjct: 68 LWKPDILMYNSADEGFDGTYQTSVVVTH 95
>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
Length = 1946
Score = 22.2 bits (45), Expect = 5.5
Identities = 10/31 (32%), Positives = 15/31 (48%)
Frame = +1
Query: 340 TSPRGVKIDGDDSSWDFGVSAGFYLDATNEP 432
T+P G +I+ + DFG A F + P
Sbjct: 305 TAPLGAEIEPSTQTIDFGRPATFTCNVRGNP 335
>AF388659-1|AAK71995.1| 782|Apis mellifera
1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
Length = 782
Score = 21.4 bits (43), Expect = 9.6
Identities = 8/20 (40%), Positives = 13/20 (65%)
Frame = -1
Query: 98 ASCPCLISDELRKNYIHNYL 39
+SC CL DE+R++ +L
Sbjct: 324 SSCSCLDCDEIRESLDTQFL 343
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 233,615
Number of Sequences: 438
Number of extensions: 5516
Number of successful extensions: 17
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 24154023
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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