Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120020.Seq
         (726 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetyla...    22   4.4  
AY337337-2|AAP94193.1|  491|Tribolium castaneum cytochrome P450 ...    22   5.8  
AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    22   5.8  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    22   5.8  
AF251548-1|AAF70178.1|  491|Tribolium castaneum cytochrome P450 ...    22   5.8  
AF225975-2|AAF74116.1|  302|Tribolium castaneum Tc-tailless prot...    21   7.7  
AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholo...    21   7.7  

>EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetylase
           1 protein.
          Length = 534

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 8/22 (36%), Positives = 15/22 (68%)
 Frame = +1

Query: 454 YIYWIGKILWVNSAVILVSRTQ 519
           ++YW+ +IL  ++ V  V+ TQ
Sbjct: 439 FLYWVDEILANHNDVYFVTMTQ 460


>AY337337-2|AAP94193.1|  491|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 491

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = +3

Query: 174 FHFNYSQEFGQLSKQQ 221
           FHFN  QEF Q+  ++
Sbjct: 134 FHFNILQEFIQIFNEE 149


>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 8/25 (32%), Positives = 12/25 (48%)
 Frame = +3

Query: 45  QFYCFYGRVASVAIHLSHFSFVQYS 119
           Q++C   R  +  I   H S  +YS
Sbjct: 383 QYFCLMARCLNTLIFYYHISTYEYS 407


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 9/23 (39%), Positives = 12/23 (52%)
 Frame = -3

Query: 661 IFAFYCVFDNFSKRYFFHNCGYN 593
           I+ FYC F  F+    F  C Y+
Sbjct: 146 IYYFYCAFIIFTVHLLFLLCIYH 168


>AF251548-1|AAF70178.1|  491|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q4 protein.
          Length = 491

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = +3

Query: 174 FHFNYSQEFGQLSKQQ 221
           FHFN  QEF Q+  ++
Sbjct: 134 FHFNILQEFIQIFNEE 149


>AF225975-2|AAF74116.1|  302|Tribolium castaneum Tc-tailless
           protein.
          Length = 302

 Score = 21.4 bits (43), Expect = 7.7
 Identities = 10/24 (41%), Positives = 15/24 (62%)
 Frame = +3

Query: 207 LSKQQRSSKVLRSQLRGIPPGHVM 278
           L +QQ SS    S++   PPG+V+
Sbjct: 121 LRRQQMSSYYNESRVMMSPPGNVL 144


>AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholog
           protein.
          Length = 406

 Score = 21.4 bits (43), Expect = 7.7
 Identities = 10/24 (41%), Positives = 15/24 (62%)
 Frame = +3

Query: 207 LSKQQRSSKVLRSQLRGIPPGHVM 278
           L +QQ SS    S++   PPG+V+
Sbjct: 121 LRRQQMSSYYNESRVMMSPPGNVL 144


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 164,149
Number of Sequences: 336
Number of extensions: 3571
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19363530
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)