Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV120012.Seq
(701 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AE014297-4234|AAF56792.1| 421|Drosophila melanogaster CG1894-PA... 29 4.6
L05109-1|AAA70421.1| 632|Drosophila melanogaster poly(A)-bindin... 29 8.1
AY118528-1|AAM49897.1| 634|Drosophila melanogaster LD24412p pro... 29 8.1
AE013599-2628|AAS64811.1| 634|Drosophila melanogaster CG5119-PH... 29 8.1
AE013599-2627|AAM68178.1| 634|Drosophila melanogaster CG5119-PG... 29 8.1
AE013599-2626|AAF57747.1| 634|Drosophila melanogaster CG5119-PF... 29 8.1
AE013599-2625|AAM68177.1| 634|Drosophila melanogaster CG5119-PE... 29 8.1
AE013599-2624|AAM68176.1| 634|Drosophila melanogaster CG5119-PD... 29 8.1
AE013599-2623|AAF57746.1| 634|Drosophila melanogaster CG5119-PC... 29 8.1
AE013599-2622|AAF57745.1| 634|Drosophila melanogaster CG5119-PB... 29 8.1
AE013599-2621|AAM68175.1| 634|Drosophila melanogaster CG5119-PA... 29 8.1
>AE014297-4234|AAF56792.1| 421|Drosophila melanogaster CG1894-PA
protein.
Length = 421
Score = 29.5 bits (63), Expect = 4.6
Identities = 12/37 (32%), Positives = 23/37 (62%), Gaps = 2/37 (5%)
Frame = -3
Query: 246 VVSPPTRCTYICIFYPR-VCLQRLYNFHILNC-WRCP 142
V++ Y+C F + +CL++ Y++H+ +C RCP
Sbjct: 166 VINDKATTIYVCEFCLKYMCLRKSYSYHLYDCKKRCP 202
>L05109-1|AAA70421.1| 632|Drosophila melanogaster poly(A)-binding
protein protein.
Length = 632
Score = 28.7 bits (61), Expect = 8.1
Identities = 12/20 (60%), Positives = 13/20 (65%)
Frame = -1
Query: 626 RHLQVFGLNLLVLNCDDAFD 567
RH VFG+NL V N DD D
Sbjct: 278 RHESVFGVNLYVKNLDDTID 297
>AY118528-1|AAM49897.1| 634|Drosophila melanogaster LD24412p
protein.
Length = 634
Score = 28.7 bits (61), Expect = 8.1
Identities = 12/20 (60%), Positives = 13/20 (65%)
Frame = -1
Query: 626 RHLQVFGLNLLVLNCDDAFD 567
RH VFG+NL V N DD D
Sbjct: 280 RHESVFGVNLYVKNLDDTID 299
>AE013599-2628|AAS64811.1| 634|Drosophila melanogaster CG5119-PH,
isoform H protein.
Length = 634
Score = 28.7 bits (61), Expect = 8.1
Identities = 12/20 (60%), Positives = 13/20 (65%)
Frame = -1
Query: 626 RHLQVFGLNLLVLNCDDAFD 567
RH VFG+NL V N DD D
Sbjct: 280 RHESVFGVNLYVKNLDDTID 299
>AE013599-2627|AAM68178.1| 634|Drosophila melanogaster CG5119-PG,
isoform G protein.
Length = 634
Score = 28.7 bits (61), Expect = 8.1
Identities = 12/20 (60%), Positives = 13/20 (65%)
Frame = -1
Query: 626 RHLQVFGLNLLVLNCDDAFD 567
RH VFG+NL V N DD D
Sbjct: 280 RHESVFGVNLYVKNLDDTID 299
>AE013599-2626|AAF57747.1| 634|Drosophila melanogaster CG5119-PF,
isoform F protein.
Length = 634
Score = 28.7 bits (61), Expect = 8.1
Identities = 12/20 (60%), Positives = 13/20 (65%)
Frame = -1
Query: 626 RHLQVFGLNLLVLNCDDAFD 567
RH VFG+NL V N DD D
Sbjct: 280 RHESVFGVNLYVKNLDDTID 299
>AE013599-2625|AAM68177.1| 634|Drosophila melanogaster CG5119-PE,
isoform E protein.
Length = 634
Score = 28.7 bits (61), Expect = 8.1
Identities = 12/20 (60%), Positives = 13/20 (65%)
Frame = -1
Query: 626 RHLQVFGLNLLVLNCDDAFD 567
RH VFG+NL V N DD D
Sbjct: 280 RHESVFGVNLYVKNLDDTID 299
>AE013599-2624|AAM68176.1| 634|Drosophila melanogaster CG5119-PD,
isoform D protein.
Length = 634
Score = 28.7 bits (61), Expect = 8.1
Identities = 12/20 (60%), Positives = 13/20 (65%)
Frame = -1
Query: 626 RHLQVFGLNLLVLNCDDAFD 567
RH VFG+NL V N DD D
Sbjct: 280 RHESVFGVNLYVKNLDDTID 299
>AE013599-2623|AAF57746.1| 634|Drosophila melanogaster CG5119-PC,
isoform C protein.
Length = 634
Score = 28.7 bits (61), Expect = 8.1
Identities = 12/20 (60%), Positives = 13/20 (65%)
Frame = -1
Query: 626 RHLQVFGLNLLVLNCDDAFD 567
RH VFG+NL V N DD D
Sbjct: 280 RHESVFGVNLYVKNLDDTID 299
>AE013599-2622|AAF57745.1| 634|Drosophila melanogaster CG5119-PB,
isoform B protein.
Length = 634
Score = 28.7 bits (61), Expect = 8.1
Identities = 12/20 (60%), Positives = 13/20 (65%)
Frame = -1
Query: 626 RHLQVFGLNLLVLNCDDAFD 567
RH VFG+NL V N DD D
Sbjct: 280 RHESVFGVNLYVKNLDDTID 299
>AE013599-2621|AAM68175.1| 634|Drosophila melanogaster CG5119-PA,
isoform A protein.
Length = 634
Score = 28.7 bits (61), Expect = 8.1
Identities = 12/20 (60%), Positives = 13/20 (65%)
Frame = -1
Query: 626 RHLQVFGLNLLVLNCDDAFD 567
RH VFG+NL V N DD D
Sbjct: 280 RHESVFGVNLYVKNLDDTID 299
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,898,705
Number of Sequences: 53049
Number of extensions: 635577
Number of successful extensions: 1671
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1606
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1671
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3087795150
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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