Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV120009.Seq
(721 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g17910.1 68417.m02669 zinc finger (C3HC4-type RING finger) fa... 36 0.020
At4g33565.1 68417.m04770 zinc finger (C3HC4-type RING finger) fa... 36 0.036
At4g15975.1 68417.m02425 zinc finger (C3HC4-type RING finger) fa... 35 0.047
At1g72200.1 68414.m08348 zinc finger (C3HC4-type RING finger) fa... 35 0.047
At5g17600.1 68418.m02064 zinc finger (C3HC4-type RING finger) fa... 35 0.062
At4g10160.1 68417.m01662 zinc finger (C3HC4-type RING finger) fa... 34 0.11
At3g05200.1 68416.m00567 zinc finger (C3HC4-type RING finger) fa... 34 0.11
At3g03550.1 68416.m00357 zinc finger (C3HC4-type RING finger) fa... 34 0.11
At1g72220.1 68414.m08350 zinc finger (C3HC4-type RING finger) fa... 34 0.11
At5g37270.1 68418.m04477 zinc finger (C3HC4-type RING finger) fa... 33 0.14
At5g37250.1 68418.m04475 zinc finger (C3HC4-type RING finger) fa... 33 0.19
At5g37230.1 68418.m04472 zinc finger (C3HC4-type RING finger) fa... 33 0.19
At5g42200.1 68418.m05136 zinc finger (C3HC4-type RING finger) fa... 33 0.25
At5g10380.1 68418.m01204 zinc finger (C3HC4-type RING finger) fa... 33 0.25
At2g35000.1 68415.m04294 zinc finger (C3HC4-type RING finger) fa... 32 0.33
At1g22500.1 68414.m02811 zinc finger (C3HC4-type RING finger) fa... 32 0.44
At5g27420.1 68418.m03273 zinc finger (C3HC4-type RING finger) fa... 31 0.58
At4g10150.1 68417.m01660 zinc finger (C3HC4-type RING finger) fa... 31 0.58
At3g16720.1 68416.m02135 zinc finger (C3HC4-type RING finger) fa... 31 0.58
At1g33480.1 68414.m04144 zinc finger (C3HC4-type RING finger) fa... 31 0.58
At3g62690.1 68416.m07042 zinc finger (C3HC4-type RING finger) fa... 31 0.77
At5g66070.1 68418.m08324 zinc finger (C3HC4-type RING finger) fa... 31 1.0
At5g43420.1 68418.m05309 zinc finger (C3HC4-type RING finger) fa... 31 1.0
At5g41430.1 68418.m05032 zinc finger (C3HC4-type RING finger) fa... 31 1.0
At2g20030.1 68415.m02341 zinc finger (C3HC4-type RING finger) fa... 31 1.0
At2g17450.1 68415.m02014 zinc finger (C3HC4-type RING finger) fa... 31 1.0
At3g60300.1 68416.m06740 RWD domain-containing protein contains ... 30 1.3
At4g28370.1 68417.m04061 zinc finger (C3HC4-type RING finger) fa... 30 1.8
At2g34990.1 68415.m04293 zinc finger (C3HC4-type RING finger) fa... 30 1.8
At2g29840.1 68415.m03624 zinc finger (C3HC4-type RING finger) fa... 30 1.8
At1g28040.1 68414.m03433 zinc finger (C3HC4-type RING finger) fa... 30 1.8
At1g18780.1 68414.m02341 zinc finger (C3HC4-type RING finger) fa... 30 1.8
At5g20885.1 68418.m02480 zinc finger (C3HC4-type RING finger) fa... 29 2.3
At5g06490.1 68418.m00728 zinc finger (C3HC4-type RING finger) fa... 29 2.3
At2g47560.1 68415.m05935 zinc finger (C3HC4-type RING finger) fa... 29 2.3
At2g42350.1 68415.m05241 zinc finger (C3HC4-type RING finger) fa... 29 2.3
At1g49230.1 68414.m05519 zinc finger (C3HC4-type RING finger) fa... 29 2.3
At1g26800.1 68414.m03266 zinc finger (C3HC4-type RING finger) fa... 29 2.3
At5g01880.1 68418.m00107 zinc finger (C3HC4-type RING finger) fa... 29 3.1
At3g58720.1 68416.m06545 zinc finger (C3HC4-type RING finger) fa... 29 3.1
At1g35330.1 68414.m04379 zinc finger (C3HC4-type RING finger) fa... 29 3.1
At5g02750.1 68418.m00217 zinc finger (C3HC4-type RING finger) fa... 29 4.1
At4g24015.1 68417.m03451 zinc finger (RING-H2 type) protein-rela... 29 4.1
At4g02075.1 68417.m00278 zinc finger (C3HC4-type RING finger) fa... 29 4.1
At3g14320.1 68416.m01811 zinc finger (C3HC4-type RING finger) fa... 29 4.1
At2g25410.1 68415.m03043 hypothetical protein 29 4.1
At1g10170.1 68414.m01147 NF-X1 type zinc finger family protein c... 29 4.1
At5g43200.1 68418.m05278 zinc finger (C3HC4-type RING finger) fa... 28 5.4
At2g15740.1 68415.m01802 zinc finger (C2H2 type) family protein ... 28 5.4
At1g21370.2 68414.m02674 expressed protein 28 5.4
At1g21370.1 68414.m02673 expressed protein 28 5.4
At1g20823.1 68414.m02608 zinc finger (C3HC4-type RING finger) fa... 28 5.4
At5g38070.1 68418.m04587 zinc finger (C3HC4-type RING finger) fa... 28 7.2
At5g37280.1 68418.m04478 zinc finger (C3HC4-type RING finger) fa... 28 7.2
At5g10650.1 68418.m01233 zinc finger (C3HC4-type RING finger) fa... 28 7.2
At4g23030.1 68417.m03321 MATE efflux protein-related contains Pf... 28 7.2
At4g09130.1 68417.m01507 zinc finger (C3HC4-type RING finger) fa... 28 7.2
At3g02800.1 68416.m00272 tyrosine specific protein phosphatase f... 28 7.2
At2g37580.1 68415.m04610 zinc finger (C3HC4-type RING finger) fa... 28 7.2
At2g20650.2 68415.m02422 zinc finger (C3HC4-type RING finger) fa... 28 7.2
At2g20650.1 68415.m02421 zinc finger (C3HC4-type RING finger) fa... 28 7.2
At1g76410.1 68414.m08881 zinc finger (C3HC4-type RING finger) fa... 28 7.2
At5g55970.2 68418.m06981 zinc finger (C3HC4-type RING finger) fa... 27 9.5
At5g55970.1 68418.m06980 zinc finger (C3HC4-type RING finger) fa... 27 9.5
At5g05530.1 68418.m00600 zinc finger (C3HC4-type RING finger) fa... 27 9.5
At4g09120.1 68417.m01505 zinc finger (C3HC4-type RING finger) fa... 27 9.5
At3g18930.2 68416.m02403 zinc finger (C3HC4-type RING finger) fa... 27 9.5
At3g18930.1 68416.m02402 zinc finger (C3HC4-type RING finger) fa... 27 9.5
At2g17730.1 68415.m02054 zinc finger (C3HC4-type RING finger) fa... 27 9.5
At2g01760.1 68415.m00106 two-component responsive regulator fami... 27 9.5
At1g72310.1 68414.m08359 zinc finger (C3HC4-type RING finger) fa... 27 9.5
At1g61780.1 68414.m06967 postsynaptic protein-related similar to... 27 9.5
At1g57570.1 68414.m06533 jacalin lectin family protein similar t... 27 9.5
At1g53820.1 68414.m06126 zinc finger (C3HC4-type RING finger) fa... 27 9.5
At1g49850.1 68414.m05589 zinc finger (C3HC4-type RING finger) fa... 27 9.5
>At4g17910.1 68417.m02669 zinc finger (C3HC4-type RING finger) family
protein / pentatricopeptide (PPR) repeat-containing
protein contains Pfam domains PF01535: PPR repeat and
PF00097: Zinc finger, C3HC4 type (RING finger)
Length = 1208
Score = 36.3 bits (80), Expect = 0.020
Identities = 18/71 (25%), Positives = 33/71 (46%)
Frame = +3
Query: 21 LKDRNYYMFKLFKDYWPTCTTECQICLEKIDDNGGIVAMPDTGMLNLEKMFHEQCIQRWR 200
+K ++ K ++ + T+C ICL + +++ + +P FH CI RW
Sbjct: 1031 IKKIGFFKLKKHQNGFKINGTDCSICLGEFNEDESLRLLP-----KCNHTFHVVCIDRWL 1085
Query: 201 REHTRDPFNRA 233
+ H+ P RA
Sbjct: 1086 KSHSNCPLCRA 1096
>At4g33565.1 68417.m04770 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 204
Score = 35.5 bits (78), Expect = 0.036
Identities = 16/51 (31%), Positives = 24/51 (47%)
Frame = +3
Query: 81 TECQICLEKIDDNGGIVAMPDTGMLNLEKMFHEQCIQRWRREHTRDPFNRA 233
T+C +CL + ++ + +P + FH CI W R HT P RA
Sbjct: 52 TDCSVCLSEFEEEETLRLLP-----KCKHAFHLYCIDTWLRSHTNCPLCRA 97
>At4g15975.1 68417.m02425 zinc finger (C3HC4-type RING finger)
family protein contains Pfam domain, PF00097: Zinc
finger, C3HC4 type (RING finger)
Length = 235
Score = 35.1 bits (77), Expect = 0.047
Identities = 17/50 (34%), Positives = 22/50 (44%)
Frame = +3
Query: 84 ECQICLEKIDDNGGIVAMPDTGMLNLEKMFHEQCIQRWRREHTRDPFNRA 233
EC +CL + DN MP N + FH CI W H+ P R+
Sbjct: 75 ECSVCLSEFKDNESGRVMP-----NCKHTFHVHCIDMWFHSHSSCPLCRS 119
>At1g72200.1 68414.m08348 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097: Zinc
finger, C3HC4 type (RING finger)
Length = 404
Score = 35.1 bits (77), Expect = 0.047
Identities = 17/50 (34%), Positives = 24/50 (48%)
Frame = +3
Query: 84 ECQICLEKIDDNGGIVAMPDTGMLNLEKMFHEQCIQRWRREHTRDPFNRA 233
EC +CL + +D+ + +P +FH CI W R HT P RA
Sbjct: 143 ECSVCLNEFEDDETLRLIPKCC-----HVFHPGCIDAWLRSHTTCPLCRA 187
>At5g17600.1 68418.m02064 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 362
Score = 34.7 bits (76), Expect = 0.062
Identities = 16/59 (27%), Positives = 26/59 (44%)
Frame = +3
Query: 81 TECQICLEKIDDNGGIVAMPDTGMLNLEKMFHEQCIQRWRREHTRDPFNRAIKYYFNFP 257
++C +CL + ++N + +P FH CI W + H+ P RA N P
Sbjct: 140 SDCSVCLSEFEENESLRLLP-----KCNHAFHLPCIDTWLKSHSNCPLCRAFVTGVNNP 193
>At4g10160.1 68417.m01662 zinc finger (C3HC4-type RING finger)
family protein zinc finger protein, Arabidopsis
thaliana, gb:L76926
Length = 225
Score = 33.9 bits (74), Expect = 0.11
Identities = 17/60 (28%), Positives = 25/60 (41%)
Frame = +3
Query: 51 LFKDYWPTCTTECQICLEKIDDNGGIVAMPDTGMLNLEKMFHEQCIQRWRREHTRDPFNR 230
++K+ + T+C +CL + MP G FH +CI W HT P R
Sbjct: 85 IYKESFTVNDTQCSVCLGDYQAEEKLQQMPSCG-----HTFHMECIDLWLTSHTTCPLCR 139
>At3g05200.1 68416.m00567 zinc finger (C3HC4-type RING finger)
family protein (ATL6) contains Pfam profile: PF00097:
Zinc finger, C3HC4 type (RING finger)
Length = 398
Score = 33.9 bits (74), Expect = 0.11
Identities = 16/50 (32%), Positives = 23/50 (46%)
Frame = +3
Query: 84 ECQICLEKIDDNGGIVAMPDTGMLNLEKMFHEQCIQRWRREHTRDPFNRA 233
EC ICL + +D+ + +P + +FH CI W H P RA
Sbjct: 127 ECAICLNEFEDDETLRLLP-----KCDHVFHPHCIDAWLEAHVTCPVCRA 171
>At3g03550.1 68416.m00357 zinc finger (C3HC4-type RING finger)
family protein contains zinc finger domain, C3HC4 type
(RING finger) 152633.
Length = 356
Score = 33.9 bits (74), Expect = 0.11
Identities = 14/52 (26%), Positives = 24/52 (46%)
Frame = +3
Query: 78 TTECQICLEKIDDNGGIVAMPDTGMLNLEKMFHEQCIQRWRREHTRDPFNRA 233
+++C +CL + +N + +P FH CI W + H+ P RA
Sbjct: 156 SSDCSVCLSEFQENESLRLLP-----KCNHAFHVPCIDTWLKSHSNCPLCRA 202
>At1g72220.1 68414.m08350 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger); similar to GI:4928397
from [Arabidopsis thaliana] (Plant Mol. Biol. 40 (4),
579-590 (1999))
Length = 413
Score = 33.9 bits (74), Expect = 0.11
Identities = 15/51 (29%), Positives = 23/51 (45%)
Frame = +3
Query: 81 TECQICLEKIDDNGGIVAMPDTGMLNLEKMFHEQCIQRWRREHTRDPFNRA 233
T+C +CL + +++ + +P FH CI W HT P RA
Sbjct: 175 TDCPVCLNEFEEDESLRLLP-----KCNHAFHISCIDTWLSSHTNCPLCRA 220
>At5g37270.1 68418.m04477 zinc finger (C3HC4-type RING finger)
family protein ow similarity to RING-H2 finger protein
RHA3b [gi:3790575], RHA1a [gi:3790554]; contains Pfam
domain zinc finger, C3HC4 type (RING finger) PF00097
Length = 208
Score = 33.5 bits (73), Expect = 0.14
Identities = 20/65 (30%), Positives = 27/65 (41%), Gaps = 2/65 (3%)
Frame = +3
Query: 54 FKDYWPTCTTECQICLEKIDDN--GGIVAMPDTGMLNLEKMFHEQCIQRWRREHTRDPFN 227
F D T C ICLE ++ I+ +PD L FH+ CI W + P
Sbjct: 142 FTDLGDEEETTCSICLEDFSESHDDNIILLPDCFHL-----FHQSCIFEWLKRQRSCPLC 196
Query: 228 RAIKY 242
R + Y
Sbjct: 197 RRVPY 201
>At5g37250.1 68418.m04475 zinc finger (C3HC4-type RING finger)
family protein low similarity to RING-H2 finger protein
RHA3b [gi:3790575], RHA3a [gi:3790573]; contains Pfam
domain zinc finger, C3HC4 type (RING finger) PF00097
Length = 192
Score = 33.1 bits (72), Expect = 0.19
Identities = 18/56 (32%), Positives = 25/56 (44%), Gaps = 2/56 (3%)
Frame = +3
Query: 81 TECQICLEKIDDN--GGIVAMPDTGMLNLEKMFHEQCIQRWRREHTRDPFNRAIKY 242
T C ICLE ++ I+ +PD L FH+ CI W + P R + Y
Sbjct: 135 TTCSICLEDFSESHDDNIILLPDCFHL-----FHQNCIFEWLKRQRSCPLCRRVPY 185
>At5g37230.1 68418.m04472 zinc finger (C3HC4-type RING finger)
family protein low similarity to RING-H2 finger protein
RHA3b, Arabidopsis thaliana, PIR:T41745 [gi:3790575];
contains Pfam domain zinc finger, C3HC4 type (RING
finger) PF00097
Length = 208
Score = 33.1 bits (72), Expect = 0.19
Identities = 17/56 (30%), Positives = 26/56 (46%), Gaps = 2/56 (3%)
Frame = +3
Query: 81 TECQICLEKIDDN--GGIVAMPDTGMLNLEKMFHEQCIQRWRREHTRDPFNRAIKY 242
T C IC+E ++ I+ +PD L FH+ CI +W + P R + Y
Sbjct: 151 TTCSICMEDFSESHDDNIILLPDCFHL-----FHQSCIFKWLKRQRSCPLCRRVPY 201
>At5g42200.1 68418.m05136 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 163
Score = 32.7 bits (71), Expect = 0.25
Identities = 20/61 (32%), Positives = 26/61 (42%)
Frame = +3
Query: 78 TTECQICLEKIDDNGGIVAMPDTGMLNLEKMFHEQCIQRWRREHTRDPFNRAIKYYFNFP 257
+TEC +CLE I+ +P FH+ C W HT P RA + N P
Sbjct: 101 STECAVCLEDIESGQSTRLVP-----GCNHGFHQLCADTWLSNHTVCPVCRA-ELAPNLP 154
Query: 258 Q 260
Q
Sbjct: 155 Q 155
>At5g10380.1 68418.m01204 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 301
Score = 32.7 bits (71), Expect = 0.25
Identities = 15/51 (29%), Positives = 22/51 (43%)
Frame = +3
Query: 81 TECQICLEKIDDNGGIVAMPDTGMLNLEKMFHEQCIQRWRREHTRDPFNRA 233
TEC +CL + +++ + +P FH CI W H P RA
Sbjct: 133 TECSVCLNEFEEDESLRLLP-----KCSHAFHLNCIDTWLLSHKNCPLCRA 178
>At2g35000.1 68415.m04294 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097: Zinc
finger, C3HC4 type (RING finger)
Length = 378
Score = 32.3 bits (70), Expect = 0.33
Identities = 16/50 (32%), Positives = 24/50 (48%)
Frame = +3
Query: 84 ECQICLEKIDDNGGIVAMPDTGMLNLEKMFHEQCIQRWRREHTRDPFNRA 233
EC +CL + +D+ + MP +FH C+ W EH+ P RA
Sbjct: 134 ECAVCLCEFEDDETLRLMPPCC-----HVFHADCVDVWLSEHSTCPLCRA 178
>At1g22500.1 68414.m02811 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097: Zinc
finger, C3HC4 type (RING finger)
Length = 381
Score = 31.9 bits (69), Expect = 0.44
Identities = 16/50 (32%), Positives = 23/50 (46%)
Frame = +3
Query: 84 ECQICLEKIDDNGGIVAMPDTGMLNLEKMFHEQCIQRWRREHTRDPFNRA 233
EC +CL + +D+ + +P +FH CI W R T P RA
Sbjct: 117 ECPVCLNEFEDDETLRLIPQCC-----HVFHPGCIDAWLRSQTTCPLCRA 161
>At5g27420.1 68418.m03273 zinc finger (C3HC4-type RING finger)
family protein similar to RING-H2 zinc finger protein
ATL6 [Arabidopsis thaliana]
gi|4928403|gb|AAD33584.1|AF132016_1[4928403]; contains
Pfam domain, PF00097: Zinc finger, C3HC4 type (RING
finger)
Length = 368
Score = 31.5 bits (68), Expect = 0.58
Identities = 15/49 (30%), Positives = 23/49 (46%)
Frame = +3
Query: 84 ECQICLEKIDDNGGIVAMPDTGMLNLEKMFHEQCIQRWRREHTRDPFNR 230
EC ICL + +D+ + +P + +FH CI W + H P R
Sbjct: 123 ECAICLNEFEDDETLRLLP-----KCDHVFHPHCIGAWLQGHVTCPVCR 166
>At4g10150.1 68417.m01660 zinc finger (C3HC4-type RING finger)
family protein RING-H2 finger protein RHA1a, Arabidopsis
thaliana,AF078683
Length = 236
Score = 31.5 bits (68), Expect = 0.58
Identities = 16/60 (26%), Positives = 25/60 (41%)
Frame = +3
Query: 51 LFKDYWPTCTTECQICLEKIDDNGGIVAMPDTGMLNLEKMFHEQCIQRWRREHTRDPFNR 230
++K+ + ++C +CL + MP G FH +CI W HT P R
Sbjct: 99 IYKESFIVKDSQCSVCLGDYQAEEKLQQMPSCG-----HTFHMECIDLWLTSHTTCPLCR 153
>At3g16720.1 68416.m02135 zinc finger (C3HC4-type RING finger)
family protein contains Pfam domain, PF00097: Zinc
finger, C3HC4 type (RING finger)
Length = 304
Score = 31.5 bits (68), Expect = 0.58
Identities = 14/51 (27%), Positives = 24/51 (47%)
Frame = +3
Query: 84 ECQICLEKIDDNGGIVAMPDTGMLNLEKMFHEQCIQRWRREHTRDPFNRAI 236
EC +CL + +++ +P N + FH CI W H+ P R++
Sbjct: 118 ECAVCLSEFEESETGRVLP-----NCQHTFHVDCIDMWFHSHSTCPLCRSL 163
>At1g33480.1 68414.m04144 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 508
Score = 31.5 bits (68), Expect = 0.58
Identities = 16/60 (26%), Positives = 25/60 (41%)
Frame = +3
Query: 51 LFKDYWPTCTTECQICLEKIDDNGGIVAMPDTGMLNLEKMFHEQCIQRWRREHTRDPFNR 230
+FK+ + ++C +CL N + +P + FH CI W HT P R
Sbjct: 88 VFKESFTVMDSQCSVCLGDYQPNDKLQQIPVC-----KHTFHMDCIDLWLTSHTTCPLCR 142
>At3g62690.1 68416.m07042 zinc finger (C3HC4-type RING finger)
family protein (ATL5) identical to RING-H2 zinc finger
protein ATL5 [Arabidopsis thaliana]
gi|4928401|gb|AAD33583
Length = 257
Score = 31.1 bits (67), Expect = 0.77
Identities = 15/50 (30%), Positives = 23/50 (46%)
Frame = +3
Query: 84 ECQICLEKIDDNGGIVAMPDTGMLNLEKMFHEQCIQRWRREHTRDPFNRA 233
EC +CL + +++ +P G +FH CI W R + P RA
Sbjct: 112 ECSVCLSEFEEDDEGRVLPKCG-----HVFHVDCIDTWFRSRSSCPLCRA 156
>At5g66070.1 68418.m08324 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 221
Score = 30.7 bits (66), Expect = 1.0
Identities = 14/48 (29%), Positives = 21/48 (43%)
Frame = +3
Query: 87 CQICLEKIDDNGGIVAMPDTGMLNLEKMFHEQCIQRWRREHTRDPFNR 230
C +CL+ + ++P + MFH CI +W R H P R
Sbjct: 176 CSVCLQDFQVGETVRSLP-----HCHHMFHLPCIDKWLRRHASCPLCR 218
>At5g43420.1 68418.m05309 zinc finger (C3HC4-type RING finger)
family protein low similarity to RING-H2 zinc finger
protein ATL4 [Arabidopsis thaliana] GI:4928399; contains
Pfam profile PF00097: Zinc finger, C3HC4 type (RING
finger)
Length = 375
Score = 30.7 bits (66), Expect = 1.0
Identities = 17/62 (27%), Positives = 26/62 (41%), Gaps = 1/62 (1%)
Frame = +3
Query: 84 ECQICLEKIDDNGGIVAMPDTGMLNLEKMFHEQCIQRWRREHTRDPFNRA-IKYYFNFPQ 260
EC +CL + D + +P N +FH CI W + + P R + +FP
Sbjct: 137 ECSVCLSEFQDEEKLRIIP-----NCSHLFHIDCIDVWLQNNANCPLCRTRVSCDTSFPP 191
Query: 261 KR 266
R
Sbjct: 192 DR 193
>At5g41430.1 68418.m05032 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 161
Score = 30.7 bits (66), Expect = 1.0
Identities = 13/45 (28%), Positives = 22/45 (48%)
Frame = +3
Query: 87 CQICLEKIDDNGGIVAMPDTGMLNLEKMFHEQCIQRWRREHTRDP 221
C ICLE+++D I+ + +FH CI W +++ P
Sbjct: 117 CSICLEELEDGHEIIRIK-----KCRHVFHRSCIDSWLKQNRSCP 156
>At2g20030.1 68415.m02341 zinc finger (C3HC4-type RING finger)
family protein similar to RING-H2 zinc finger protein
ATL6 [Arabidopsis thaliana] GI:4928403; contains Pfam
profile PF00097: Zinc finger, C3HC4 type (RING finger)
Length = 390
Score = 30.7 bits (66), Expect = 1.0
Identities = 15/49 (30%), Positives = 21/49 (42%)
Frame = +3
Query: 84 ECQICLEKIDDNGGIVAMPDTGMLNLEKMFHEQCIQRWRREHTRDPFNR 230
EC +CL K +D + +P FH CI +W +H P R
Sbjct: 123 ECSVCLSKFEDVEILRLLP-----KCRHAFHIGCIDQWLEQHATCPLCR 166
>At2g17450.1 68415.m02014 zinc finger (C3HC4-type RING finger)
family protein contains Pfam domain, PF00097: Zinc
finger, C3HC4 type (RING finger)
Length = 185
Score = 30.7 bits (66), Expect = 1.0
Identities = 18/53 (33%), Positives = 23/53 (43%)
Frame = +3
Query: 78 TTECQICLEKIDDNGGIVAMPDTGMLNLEKMFHEQCIQRWRREHTRDPFNRAI 236
+TEC ICL D I +P G FH +CI +W + P R I
Sbjct: 99 STECAICLTDFADGEEIRVLPLCG-----HSFHVECIDKWLVSRSSCPSCRRI 146
>At3g60300.1 68416.m06740 RWD domain-containing protein contains
weak similarity to RING finger protein 25 (RING finger
protein AO7) (Swiss-Prot:Q9QZR0) [Mus musculus]
Length = 366
Score = 30.3 bits (65), Expect = 1.3
Identities = 13/39 (33%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Frame = +3
Query: 84 ECQICLEKI-DDNGGIVAMPDTGMLNLEKMFHEQCIQRW 197
+C +CL + ++GG MP +++ FH +CI RW
Sbjct: 120 DCPLCLYPLFPEDGGSKQMPFMKLMSCFHCFHCECIIRW 158
>At4g28370.1 68417.m04061 zinc finger (C3HC4-type RING finger)
family protein contains Pfam PF00097: Zinc finger, C3HC4
type (RING finger)
Length = 466
Score = 29.9 bits (64), Expect = 1.8
Identities = 15/40 (37%), Positives = 19/40 (47%)
Frame = +3
Query: 78 TTECQICLEKIDDNGGIVAMPDTGMLNLEKMFHEQCIQRW 197
TT+C IC+ ID D + E FH C+QRW
Sbjct: 413 TTDCVICMTAIDLRQHT---SDCMVTPCEHFFHSGCLQRW 449
>At2g34990.1 68415.m04293 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097: Zinc
finger, C3HC4 type (RING finger)
Length = 302
Score = 29.9 bits (64), Expect = 1.8
Identities = 13/49 (26%), Positives = 24/49 (48%)
Frame = +3
Query: 84 ECQICLEKIDDNGGIVAMPDTGMLNLEKMFHEQCIQRWRREHTRDPFNR 230
EC +C+ + +D+ + MP+ +FH C+ W +H+ P R
Sbjct: 95 ECAVCICEFEDHETLRLMPECC-----HVFHADCVSVWLSDHSTCPLCR 138
>At2g29840.1 68415.m03624 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 310
Score = 29.9 bits (64), Expect = 1.8
Identities = 14/37 (37%), Positives = 19/37 (51%)
Frame = +3
Query: 87 CQICLEKIDDNGGIVAMPDTGMLNLEKMFHEQCIQRW 197
C ICLE+ DD IVA+P F ++C +W
Sbjct: 261 CSICLEEFDDGRSIVALP------CGHEFDDECALKW 291
>At1g28040.1 68414.m03433 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097: Zinc
finger, C3HC4 type (RING finger)
Length = 336
Score = 29.9 bits (64), Expect = 1.8
Identities = 15/48 (31%), Positives = 21/48 (43%)
Frame = +3
Query: 87 CQICLEKIDDNGGIVAMPDTGMLNLEKMFHEQCIQRWRREHTRDPFNR 230
C ICL + + MP+ + FH QCI W + H+ P R
Sbjct: 290 CPICLSEYASKETVRCMPEC-----DHCFHVQCIDEWLKIHSSCPVCR 332
>At1g18780.1 68414.m02341 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 325
Score = 29.9 bits (64), Expect = 1.8
Identities = 14/37 (37%), Positives = 18/37 (48%)
Frame = +3
Query: 87 CQICLEKIDDNGGIVAMPDTGMLNLEKMFHEQCIQRW 197
C ICLE+ DD IV +P F E+C+ W
Sbjct: 277 CTICLEEFDDGRSIVTLP------CGHEFDEECVLEW 307
>At5g20885.1 68418.m02480 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 176
Score = 29.5 bits (63), Expect = 2.3
Identities = 12/37 (32%), Positives = 18/37 (48%)
Frame = +3
Query: 87 CQICLEKIDDNGGIVAMPDTGMLNLEKMFHEQCIQRW 197
C +CL ++D + + N MFH +CI RW
Sbjct: 82 CAVCLGDLEDGDEV-----RELRNCSHMFHRECIDRW 113
>At5g06490.1 68418.m00728 zinc finger (C3HC4-type RING finger)
family protein low similarity to RING-H2 finger protein
ATL6 [Arabidopsis thaliana] GI:4928403; contains Pfam
profile PF00097: Zinc finger, C3HC4 type (RING finger)
Length = 197
Score = 29.5 bits (63), Expect = 2.3
Identities = 17/51 (33%), Positives = 21/51 (41%)
Frame = +3
Query: 78 TTECQICLEKIDDNGGIVAMPDTGMLNLEKMFHEQCIQRWRREHTRDPFNR 230
T+ C ICL I +PD L FH+ C+ W R H P R
Sbjct: 126 TSCCSICLADYKKMDMIRVLPDCNHL-----FHDNCVDPWLRLHPTCPVCR 171
>At2g47560.1 68415.m05935 zinc finger (C3HC4-type RING finger)
family protein contains Pfam domain, PF00097: Zinc
finger, C3HC4 type (RING finger)
Length = 227
Score = 29.5 bits (63), Expect = 2.3
Identities = 15/50 (30%), Positives = 21/50 (42%)
Frame = +3
Query: 84 ECQICLEKIDDNGGIVAMPDTGMLNLEKMFHEQCIQRWRREHTRDPFNRA 233
EC +CL + ++ +P G FH CI W R + P RA
Sbjct: 107 ECSVCLSEFEEEDEGRLLPKCG-----HSFHVDCIDTWFRSRSTCPLCRA 151
>At2g42350.1 68415.m05241 zinc finger (C3HC4-type RING finger)
family protein contains Pfam domain, PF00097: Zinc
finger, C3HC4 type (RING finger)
Length = 217
Score = 29.5 bits (63), Expect = 2.3
Identities = 13/50 (26%), Positives = 22/50 (44%)
Frame = +3
Query: 81 TECQICLEKIDDNGGIVAMPDTGMLNLEKMFHEQCIQRWRREHTRDPFNR 230
TEC +CL +++ +P N + +FH C+ W + P R
Sbjct: 98 TECAVCLSLLEEKDNARMLP-----NCKHVFHVSCVDTWLTTQSTCPVCR 142
>At1g49230.1 68414.m05519 zinc finger (C3HC4-type RING finger)
family protein contains Pfam domain, PF00097: Zinc
finger, C3HC4 type (RING finger)
Length = 219
Score = 29.5 bits (63), Expect = 2.3
Identities = 15/51 (29%), Positives = 21/51 (41%)
Frame = +3
Query: 69 PTCTTECQICLEKIDDNGGIVAMPDTGMLNLEKMFHEQCIQRWRREHTRDP 221
P TEC ICL + + +P FH +CI +W H+ P
Sbjct: 125 PGLDTECAICLSEFVAEERVKLLP-----TCHHGFHVRCIDKWLSSHSSCP 170
>At1g26800.1 68414.m03266 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 204
Score = 29.5 bits (63), Expect = 2.3
Identities = 17/52 (32%), Positives = 22/52 (42%)
Frame = +3
Query: 75 CTTECQICLEKIDDNGGIVAMPDTGMLNLEKMFHEQCIQRWRREHTRDPFNR 230
C EC ICLE+ + MP + FH CI++W H P R
Sbjct: 109 CEGECVICLEEWKSEETVKEMP------CKHRFHGGCIEKWLGFHGSCPVCR 154
>At5g01880.1 68418.m00107 zinc finger (C3HC4-type RING finger)
family protein contains Pfam domain, PF00097: Zinc
finger, C3HC4 type (RING finger)
Length = 159
Score = 29.1 bits (62), Expect = 3.1
Identities = 15/47 (31%), Positives = 19/47 (40%)
Frame = +3
Query: 81 TECQICLEKIDDNGGIVAMPDTGMLNLEKMFHEQCIQRWRREHTRDP 221
TEC ICL + D + +P FH CI W H+ P
Sbjct: 103 TECAICLGEFADGERVRVLPP-----CNHSFHMSCIDTWLVSHSSCP 144
>At3g58720.1 68416.m06545 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 238
Score = 29.1 bits (62), Expect = 3.1
Identities = 14/50 (28%), Positives = 23/50 (46%)
Frame = +3
Query: 87 CQICLEKIDDNGGIVAMPDTGMLNLEKMFHEQCIQRWRREHTRDPFNRAI 236
C +CLE + ++ P + MFHE+CI W + + P R +
Sbjct: 144 CSVCLEDFEPKETVMLTP------CKHMFHEECIVPWLKTKGQCPVCRFV 187
>At1g35330.1 68414.m04379 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097: Zinc
finger, C3HC4 type (RING finger)
Length = 327
Score = 29.1 bits (62), Expect = 3.1
Identities = 16/50 (32%), Positives = 20/50 (40%)
Frame = +3
Query: 84 ECQICLEKIDDNGGIVAMPDTGMLNLEKMFHEQCIQRWRREHTRDPFNRA 233
EC ICL + +D + MP FH CI W + P RA
Sbjct: 127 ECAICLNEFEDEETLRLMPP-----CSHAFHASCIDVWLSSRSTCPVCRA 171
>At5g02750.1 68418.m00217 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 283
Score = 28.7 bits (61), Expect = 4.1
Identities = 15/49 (30%), Positives = 22/49 (44%)
Frame = +3
Query: 84 ECQICLEKIDDNGGIVAMPDTGMLNLEKMFHEQCIQRWRREHTRDPFNR 230
EC IC E++ + + MP + FH +CI W + PF R
Sbjct: 213 ECVICKEEMSEGRDVCEMP------CQHFFHWKCILPWLSKKNTCPFCR 255
>At4g24015.1 68417.m03451 zinc finger (RING-H2 type) protein-related
low similarity to RING-H2 zinc finger protein ATL4
[Arabidopsis thaliana] GI:4928399
Length = 174
Score = 28.7 bits (61), Expect = 4.1
Identities = 20/71 (28%), Positives = 32/71 (45%)
Frame = +3
Query: 21 LKDRNYYMFKLFKDYWPTCTTECQICLEKIDDNGGIVAMPDTGMLNLEKMFHEQCIQRWR 200
LKD+ + + LF + T + C +CL + + +V MP + +FH CI W
Sbjct: 85 LKDKLHVV--LFNEELGTRDSLCCVCLGEFELKEELVEMP-----LCKHIFHLDCIHLWL 137
Query: 201 REHTRDPFNRA 233
H P R+
Sbjct: 138 YSHNTCPLCRS 148
>At4g02075.1 68417.m00278 zinc finger (C3HC4-type RING finger)
family protein contains InterPro Entry IPR001841
Zn-finger, RING
Length = 218
Score = 28.7 bits (61), Expect = 4.1
Identities = 15/42 (35%), Positives = 22/42 (52%)
Frame = +3
Query: 81 TECQICLEKIDDNGGIVAMPDTGMLNLEKMFHEQCIQRWRRE 206
T C+IC E+ +++ V +G + K H CIQRW E
Sbjct: 18 TRCRICHEEEEESFFEVPCACSGTV---KFAHRNCIQRWCNE 56
>At3g14320.1 68416.m01811 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 204
Score = 28.7 bits (61), Expect = 4.1
Identities = 13/49 (26%), Positives = 23/49 (46%)
Frame = +3
Query: 84 ECQICLEKIDDNGGIVAMPDTGMLNLEKMFHEQCIQRWRREHTRDPFNR 230
EC +CL ++ D +P + + FH +CI W + ++ P R
Sbjct: 87 ECVVCLSELADGDKARVLP-----SCDHWFHVECIDSWLQSNSTCPICR 130
>At2g25410.1 68415.m03043 hypothetical protein
Length = 377
Score = 28.7 bits (61), Expect = 4.1
Identities = 14/49 (28%), Positives = 22/49 (44%)
Frame = +3
Query: 87 CQICLEKIDDNGGIVAMPDTGMLNLEKMFHEQCIQRWRREHTRDPFNRA 233
C ICL + + +P+ E FH +CI W + H+ P R+
Sbjct: 327 CPICLSEYATKETVRCLPEC-----EHCFHTECIDAWLKLHSSCPVCRS 370
>At1g10170.1 68414.m01147 NF-X1 type zinc finger family protein
contains Pfam PF01422: NF-X1 type zinc finger; similar
to transcriptional repressor NF-X1 (SP:Q12986) [Homo
sapiens]; similar to EST gb|T21002
Length = 1188
Score = 28.7 bits (61), Expect = 4.1
Identities = 14/43 (32%), Positives = 21/43 (48%)
Frame = +3
Query: 84 ECQICLEKIDDNGGIVAMPDTGMLNLEKMFHEQCIQRWRREHT 212
EC IC +K+ + I + + +FH CI+RW R T
Sbjct: 222 ECMICYDKVGRSANIWSCS-----SCYSIFHINCIKRWARAPT 259
>At5g43200.1 68418.m05278 zinc finger (C3HC4-type RING finger)
family protein low similarity to RING-H2 finger protein
RHY1a [Arabidopsis thaliana] GI:3790593; contains Pfam
profile PF00097: Zinc finger, C3HC4 type (RING finger)
Length = 207
Score = 28.3 bits (60), Expect = 5.4
Identities = 12/37 (32%), Positives = 18/37 (48%)
Frame = +3
Query: 87 CQICLEKIDDNGGIVAMPDTGMLNLEKMFHEQCIQRW 197
C ICLE++ + +P N FHE C+ +W
Sbjct: 156 CAICLEELSTSDDYCELP-----NCTHCFHEPCLTQW 187
>At2g15740.1 68415.m01802 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 329
Score = 28.3 bits (60), Expect = 5.4
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = +2
Query: 359 TQEDALDIELDFRNFFKKCNHDERMVRDGR 448
+Q A LD + K NHD+R+++DGR
Sbjct: 168 SQNSAYPQHLDMFSLSSKHNHDQRVLQDGR 197
>At1g21370.2 68414.m02674 expressed protein
Length = 342
Score = 28.3 bits (60), Expect = 5.4
Identities = 10/22 (45%), Positives = 14/22 (63%)
Frame = +3
Query: 195 WRREHTRDPFNRAIKYYFNFPQ 260
WR++ RDPF+R I Y P+
Sbjct: 301 WRKKLNRDPFHRTIPYPIGCPE 322
>At1g21370.1 68414.m02673 expressed protein
Length = 342
Score = 28.3 bits (60), Expect = 5.4
Identities = 10/22 (45%), Positives = 14/22 (63%)
Frame = +3
Query: 195 WRREHTRDPFNRAIKYYFNFPQ 260
WR++ RDPF+R I Y P+
Sbjct: 301 WRKKLNRDPFHRTIPYPIGCPE 322
>At1g20823.1 68414.m02608 zinc finger (C3HC4-type RING finger)
family protein contains Pfam domain, PF00097: Zinc
finger, C3HC4 type (RING finger)
Length = 197
Score = 28.3 bits (60), Expect = 5.4
Identities = 16/51 (31%), Positives = 20/51 (39%)
Frame = +3
Query: 84 ECQICLEKIDDNGGIVAMPDTGMLNLEKMFHEQCIQRWRREHTRDPFNRAI 236
EC ICL + + +P G FH CI W H+ P R I
Sbjct: 110 ECAICLAEFSAGDELRVLPQCG-----HGFHVACIDTWLGSHSSCPSCRQI 155
>At5g38070.1 68418.m04587 zinc finger (C3HC4-type RING finger)
family protein contains InterPro Entry IPR001841
Zn-finger, RING; contains PROSITE PS00190: Cytochrome c
family heme-binding site signature
Length = 259
Score = 27.9 bits (59), Expect = 7.2
Identities = 13/41 (31%), Positives = 20/41 (48%)
Frame = +3
Query: 84 ECQICLEKIDDNGGIVAMPDTGMLNLEKMFHEQCIQRWRRE 206
+C+IC ++ +D +G L K H C+QRW E
Sbjct: 53 QCRICHDEDEDTNMDTPCSCSGTL---KFAHHNCVQRWCNE 90
>At5g37280.1 68418.m04478 zinc finger (C3HC4-type RING finger)
family protein low similarity to RING-H2 finger protein
RHA1b [Arabidopsis thaliana] GI:3790567; contains Pfam
profile PF00097: Zinc finger, C3HC4 type (RING finger)
Length = 216
Score = 27.9 bits (59), Expect = 7.2
Identities = 14/55 (25%), Positives = 25/55 (45%), Gaps = 3/55 (5%)
Frame = +3
Query: 87 CQICLEKIDDNGGIVAMPDTGMLNLEKM---FHEQCIQRWRREHTRDPFNRAIKY 242
C IC EK+ D+ + ++ + K FH++CI +W P R + +
Sbjct: 159 CSICFEKLSDS--LSETYHNSIIQMPKCLHSFHQKCIFKWIGRQNSCPLCRRVPF 211
>At5g10650.1 68418.m01233 zinc finger (C3HC4-type RING finger)
family protein similar to Pfam domain, PF00097: Zinc
finger, C3HC4 type (RING finger)
Length = 525
Score = 27.9 bits (59), Expect = 7.2
Identities = 12/40 (30%), Positives = 20/40 (50%)
Frame = +3
Query: 84 ECQICLEKIDDNGGIVAMPDTGMLNLEKMFHEQCIQRWRR 203
+C IC E+ D + G + + M+H C+Q+W R
Sbjct: 474 KCSICQEEYVDGD------ELGTIPCQHMYHVSCVQQWLR 507
>At4g23030.1 68417.m03321 MATE efflux protein-related contains Pfam
profile PF01554: Uncharacterized membrane protein family
Length = 502
Score = 27.9 bits (59), Expect = 7.2
Identities = 16/53 (30%), Positives = 29/53 (54%)
Frame = +3
Query: 312 AITKLIAFTSAFINALHKKTPWTLNSILGIFLKNAIMTNVWSATDVNLINCVL 470
+IT + +++ F LH + L S LG+ LK + +W T+VNL+ ++
Sbjct: 181 SITLPLTYSAFFAVLLHIPINYLLVSSLGLGLKGVALGAIW--TNVNLLGFLI 231
>At4g09130.1 68417.m01507 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097: Zinc
finger, C3HC4 type (RING finger)
Length = 357
Score = 27.9 bits (59), Expect = 7.2
Identities = 16/50 (32%), Positives = 20/50 (40%)
Frame = +3
Query: 84 ECQICLEKIDDNGGIVAMPDTGMLNLEKMFHEQCIQRWRREHTRDPFNRA 233
EC ICL + +D + MP FH CI W + P RA
Sbjct: 119 ECAICLCEFEDEEPLRWMPPCS-----HTFHANCIDEWLSSRSTCPVCRA 163
>At3g02800.1 68416.m00272 tyrosine specific protein phosphatase
family protein contains tyrosine specific protein
phosphatases active site, PROSITE:PS00383
Length = 199
Score = 27.9 bits (59), Expect = 7.2
Identities = 14/41 (34%), Positives = 20/41 (48%)
Frame = +3
Query: 336 TSAFINALHKKTPWTLNSILGIFLKNAIMTNVWSATDVNLI 458
T + L K W L+S+L + KNA + W D+N I
Sbjct: 115 TGCLVGCLRKVQSWCLSSVLEEYQKNAGLK--WRQRDLNFI 153
>At2g37580.1 68415.m04610 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type
Length = 235
Score = 27.9 bits (59), Expect = 7.2
Identities = 13/49 (26%), Positives = 22/49 (44%)
Frame = +3
Query: 84 ECQICLEKIDDNGGIVAMPDTGMLNLEKMFHEQCIQRWRREHTRDPFNR 230
EC +CL D+ + + + + FH CI+ W ++H P R
Sbjct: 141 ECSVCLMVFTDSDELRQLSEC-----KHAFHVLCIETWLKDHPNCPICR 184
>At2g20650.2 68415.m02422 zinc finger (C3HC4-type RING finger)
family protein
Length = 559
Score = 27.9 bits (59), Expect = 7.2
Identities = 14/38 (36%), Positives = 19/38 (50%)
Frame = +3
Query: 84 ECQICLEKIDDNGGIVAMPDTGMLNLEKMFHEQCIQRW 197
+C IC+ ID I D + E +FH C+QRW
Sbjct: 508 DCVICMTTIDLRHRI---NDCMVTPCEHIFHSGCLQRW 542
>At2g20650.1 68415.m02421 zinc finger (C3HC4-type RING finger)
family protein
Length = 559
Score = 27.9 bits (59), Expect = 7.2
Identities = 14/38 (36%), Positives = 19/38 (50%)
Frame = +3
Query: 84 ECQICLEKIDDNGGIVAMPDTGMLNLEKMFHEQCIQRW 197
+C IC+ ID I D + E +FH C+QRW
Sbjct: 508 DCVICMTTIDLRHRI---NDCMVTPCEHIFHSGCLQRW 542
>At1g76410.1 68414.m08881 zinc finger (C3HC4-type RING finger)
family protein contains Pfam domain, PF00097: Zinc
finger, C3HC4 type (RING finger)
Length = 185
Score = 27.9 bits (59), Expect = 7.2
Identities = 16/51 (31%), Positives = 20/51 (39%)
Frame = +3
Query: 84 ECQICLEKIDDNGGIVAMPDTGMLNLEKMFHEQCIQRWRREHTRDPFNRAI 236
EC ICL + + +P G FH CI W H+ P R I
Sbjct: 103 ECAICLTEFAAGDELRVLPQCG-----HGFHVSCIDTWLGSHSSCPSCRQI 148
>At5g55970.2 68418.m06981 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 343
Score = 27.5 bits (58), Expect = 9.5
Identities = 13/40 (32%), Positives = 18/40 (45%)
Frame = +3
Query: 84 ECQICLEKIDDNGGIVAMPDTGMLNLEKMFHEQCIQRWRR 203
EC ICL K D + +P FH +C+ +W R
Sbjct: 296 ECCICLAKYKDKEEVRKLP------CSHKFHSKCVDQWLR 329
>At5g55970.1 68418.m06980 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 343
Score = 27.5 bits (58), Expect = 9.5
Identities = 13/40 (32%), Positives = 18/40 (45%)
Frame = +3
Query: 84 ECQICLEKIDDNGGIVAMPDTGMLNLEKMFHEQCIQRWRR 203
EC ICL K D + +P FH +C+ +W R
Sbjct: 296 ECCICLAKYKDKEEVRKLP------CSHKFHSKCVDQWLR 329
>At5g05530.1 68418.m00600 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 199
Score = 27.5 bits (58), Expect = 9.5
Identities = 21/77 (27%), Positives = 33/77 (42%), Gaps = 8/77 (10%)
Frame = +3
Query: 24 KDRNYYMFKLFKDYWPTC--------TTECQICLEKIDDNGGIVAMPDTGMLNLEKMFHE 179
+D Y++ + K W TC EC ICLE++ + + D +FH+
Sbjct: 120 EDVEYHLMEESKG-WTTCIPAKSITPVNECTICLEELCHDEESIETHDCC-----HVFHK 173
Query: 180 QCIQRWRREHTRDPFNR 230
C+ RW R + P R
Sbjct: 174 LCLWRWIRTKSSCPLCR 190
>At4g09120.1 68417.m01505 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097: Zinc
finger, C3HC4 type (RING finger)
Length = 345
Score = 27.5 bits (58), Expect = 9.5
Identities = 16/50 (32%), Positives = 20/50 (40%)
Frame = +3
Query: 84 ECQICLEKIDDNGGIVAMPDTGMLNLEKMFHEQCIQRWRREHTRDPFNRA 233
EC ICL + +D + MP FH CI W + P RA
Sbjct: 122 ECAICLSEFEDQETLRWMPP-----CSHTFHANCIDVWLSSWSTCPVCRA 166
>At3g18930.2 68416.m02403 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 Zinc
finger, C3HC4 type (RING finger)
Length = 411
Score = 27.5 bits (58), Expect = 9.5
Identities = 13/49 (26%), Positives = 21/49 (42%)
Frame = +3
Query: 84 ECQICLEKIDDNGGIVAMPDTGMLNLEKMFHEQCIQRWRREHTRDPFNR 230
+C +CL + ++ + +P FH +CI W R H P R
Sbjct: 155 DCAVCLLEFEEGDYVRTLP-----LCFHAFHLECIDEWLRSHPNCPLCR 198
>At3g18930.1 68416.m02402 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 Zinc
finger, C3HC4 type (RING finger)
Length = 411
Score = 27.5 bits (58), Expect = 9.5
Identities = 13/49 (26%), Positives = 21/49 (42%)
Frame = +3
Query: 84 ECQICLEKIDDNGGIVAMPDTGMLNLEKMFHEQCIQRWRREHTRDPFNR 230
+C +CL + ++ + +P FH +CI W R H P R
Sbjct: 155 DCAVCLLEFEEGDYVRTLP-----LCFHAFHLECIDEWLRSHPNCPLCR 198
>At2g17730.1 68415.m02054 zinc finger (C3HC4-type RING finger)
family protein contains Pfam PF00097: Zinc finger, C3HC4
type (RING finger) domain; similar to RING-H2 finger
protein RHA3a (GI:3790573) [Arabidopsis thaliana];
similar to ReMembR-H2 protein JR700 (GI:6942147)
[Arabidopsis thaliana]
Length = 241
Score = 27.5 bits (58), Expect = 9.5
Identities = 14/51 (27%), Positives = 20/51 (39%)
Frame = +3
Query: 78 TTECQICLEKIDDNGGIVAMPDTGMLNLEKMFHEQCIQRWRREHTRDPFNR 230
T C +CL+ + ++P + MFH CI W H P R
Sbjct: 193 TDSCSVCLQDFQLGETVRSLP-----HCHHMFHLPCIDNWLLRHGSCPMCR 238
>At2g01760.1 68415.m00106 two-component responsive regulator family
protein / response regulator family protein similar to
response regulator 9 (GI:14189890) [Zea mays]; similar
to ARR1 protein (GI:4210449) [Arabidopsis thaliana];
contains Pfam profile: PF00072 response regulator
receiver domain
Length = 382
Score = 27.5 bits (58), Expect = 9.5
Identities = 16/48 (33%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Frame = +3
Query: 576 KPMRPPKPMQCWIHPRRANCKVTRP-RNNYSDPDNENDMLHMTVLNSV 716
KP+RP + W H R C + + R++ + DN+N TV+ SV
Sbjct: 113 KPIRPEELKNIWQHVVRRKCVMKKELRSSQALEDNKNSGSLETVVVSV 160
>At1g72310.1 68414.m08359 zinc finger (C3HC4-type RING finger)
family protein (ATL3) identical to RING-H2 zinc finger
protein (ATL3) GB:AF132013 (Arabidopsis thaliana)
Length = 324
Score = 27.5 bits (58), Expect = 9.5
Identities = 14/49 (28%), Positives = 20/49 (40%)
Frame = +3
Query: 84 ECQICLEKIDDNGGIVAMPDTGMLNLEKMFHEQCIQRWRREHTRDPFNR 230
EC ICL ++ +P FH +CI W + H+ P R
Sbjct: 126 ECSICLSELVKGDKARLLP-----KCNHSFHVECIDMWFQSHSTCPICR 169
>At1g61780.1 68414.m06967 postsynaptic protein-related similar to
postsynaptic protein CRIPT GI:3098551 from [Rattus
norvegicus]
Length = 98
Score = 27.5 bits (58), Expect = 9.5
Identities = 8/19 (42%), Positives = 14/19 (73%)
Frame = +3
Query: 66 WPTCTTECQICLEKIDDNG 122
+ TCTT+C IC +++ +G
Sbjct: 49 YSTCTTKCMICKQQVHQDG 67
>At1g57570.1 68414.m06533 jacalin lectin family protein similar to
myrosinase-binding protein homolog [Arabidopsis
thaliana] GI:2997767; contains Pfam profile PF01419
jacalin-like lectin domain
Length = 614
Score = 27.5 bits (58), Expect = 9.5
Identities = 11/36 (30%), Positives = 18/36 (50%)
Frame = +3
Query: 609 WIHPRRANCKVTRPRNNYSDPDNENDMLHMTVLNSV 716
WIHPR+ K ++ N + D N + + + V V
Sbjct: 169 WIHPRKMEAKGSKGGNQWDDGTNNDGVTKIHVRGGV 204
>At1g53820.1 68414.m06126 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 310
Score = 27.5 bits (58), Expect = 9.5
Identities = 14/49 (28%), Positives = 19/49 (38%)
Frame = +3
Query: 84 ECQICLEKIDDNGGIVAMPDTGMLNLEKMFHEQCIQRWRREHTRDPFNR 230
EC +CL + D +P FH CI W + H+ P R
Sbjct: 119 ECAVCLSDLVDGDKARVLP-----RCNHGFHVDCIDMWFQSHSTCPLCR 162
>At1g49850.1 68414.m05589 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 250
Score = 27.5 bits (58), Expect = 9.5
Identities = 12/40 (30%), Positives = 18/40 (45%)
Frame = +3
Query: 84 ECQICLEKIDDNGGIVAMPDTGMLNLEKMFHEQCIQRWRR 203
+C ICLE ++++P T FH C+ W R
Sbjct: 202 DCSICLESFTKGDMLISLPCT------HSFHSSCLNPWLR 235
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,673,414
Number of Sequences: 28952
Number of extensions: 297448
Number of successful extensions: 889
Number of sequences better than 10.0: 75
Number of HSP's better than 10.0 without gapping: 846
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 862
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1565336320
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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