Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV120008.Seq
(681 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_18993| Best HMM Match : DEAD (HMM E-Value=9.3e-41) 144 6e-35
SB_25090| Best HMM Match : No HMM Matches (HMM E-Value=.) 99 2e-21
SB_30826| Best HMM Match : No HMM Matches (HMM E-Value=.) 96 3e-20
SB_16431| Best HMM Match : No HMM Matches (HMM E-Value=.) 95 6e-20
SB_3952| Best HMM Match : No HMM Matches (HMM E-Value=.) 95 6e-20
SB_19958| Best HMM Match : No HMM Matches (HMM E-Value=.) 73 2e-13
SB_29417| Best HMM Match : No HMM Matches (HMM E-Value=.) 70 2e-12
SB_59075| Best HMM Match : Helicase_C (HMM E-Value=1.3e-19) 70 2e-12
SB_55073| Best HMM Match : Helicase_C (HMM E-Value=1.3e-19) 70 2e-12
SB_17563| Best HMM Match : DEAD (HMM E-Value=0) 69 5e-12
SB_2247| Best HMM Match : DEAD (HMM E-Value=0) 69 5e-12
SB_52320| Best HMM Match : DEAD (HMM E-Value=0) 67 1e-11
SB_45898| Best HMM Match : DEAD (HMM E-Value=1.3e-36) 64 1e-10
SB_43842| Best HMM Match : RNB (HMM E-Value=0) 62 5e-10
SB_56998| Best HMM Match : No HMM Matches (HMM E-Value=.) 61 7e-10
SB_14524| Best HMM Match : DEAD (HMM E-Value=3.7e-17) 61 9e-10
SB_37351| Best HMM Match : DEAD (HMM E-Value=0) 60 1e-09
SB_37968| Best HMM Match : DEAD (HMM E-Value=3.6) 60 2e-09
SB_52411| Best HMM Match : No HMM Matches (HMM E-Value=.) 58 9e-09
SB_11691| Best HMM Match : No HMM Matches (HMM E-Value=.) 56 3e-08
SB_34731| Best HMM Match : DEAD (HMM E-Value=3.8e-31) 54 1e-07
SB_9558| Best HMM Match : DEAD (HMM E-Value=0) 52 3e-07
SB_18655| Best HMM Match : No HMM Matches (HMM E-Value=.) 47 2e-05
SB_44408| Best HMM Match : DEAD (HMM E-Value=6.8005e-42) 45 5e-05
SB_45527| Best HMM Match : DEAD (HMM E-Value=0.0069) 44 2e-04
SB_32980| Best HMM Match : DEAD (HMM E-Value=0) 44 2e-04
SB_40196| Best HMM Match : DEAD (HMM E-Value=3.5e-07) 42 3e-04
SB_38262| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 6e-04
SB_53656| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.013
SB_46680| Best HMM Match : Helicase_C (HMM E-Value=3.8e-22) 37 0.013
SB_57459| Best HMM Match : DEAD (HMM E-Value=1.50001e-40) 34 0.12
SB_10917| Best HMM Match : SPRY (HMM E-Value=1.4e-17) 33 0.28
SB_43466| Best HMM Match : DEAD (HMM E-Value=1.8) 32 0.37
SB_41683| Best HMM Match : DEAD (HMM E-Value=1.5e-27) 31 0.65
SB_51015| Best HMM Match : DEAD (HMM E-Value=0.0057) 31 0.86
SB_19286| Best HMM Match : WD40 (HMM E-Value=1.3) 31 0.86
SB_57042| Best HMM Match : WD40 (HMM E-Value=4.9e-09) 31 0.86
SB_50927| Best HMM Match : DEAD (HMM E-Value=3.2e-06) 30 1.5
SB_48046| Best HMM Match : DEAD (HMM E-Value=4e-38) 30 2.0
SB_28853| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.0
SB_36508| Best HMM Match : WD40 (HMM E-Value=0.006) 29 2.6
SB_37956| Best HMM Match : Helicase_C (HMM E-Value=1.5e-27) 29 2.6
SB_33165| Best HMM Match : ABC_tran (HMM E-Value=0) 29 3.5
SB_17925| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.5
SB_24613| Best HMM Match : Ctr (HMM E-Value=0.73) 28 6.1
>SB_18993| Best HMM Match : DEAD (HMM E-Value=9.3e-41)
Length = 690
Score = 144 bits (349), Expect = 6e-35
Identities = 66/84 (78%), Positives = 73/84 (86%)
Frame = +2
Query: 257 GRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSATWPKE 436
GRLID LE TNL+RCTYLVLDEADRMLDMGFEPQIR II+QIRPDRQTLMWSATWPKE
Sbjct: 191 GRLIDMLESRKTNLRRCTYLVLDEADRMLDMGFEPQIRTIIDQIRPDRQTLMWSATWPKE 250
Query: 437 VKKLAEDYLGDYIQINIGSLQLSA 508
V+ LA D+L DY+ I +GSL L+A
Sbjct: 251 VQGLAHDFLSDYVHITVGSLGLTA 274
Score = 108 bits (259), Expect = 5e-24
Identities = 50/77 (64%), Positives = 61/77 (79%)
Frame = +3
Query: 24 YILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPK 203
+ILP IVHIN+QP ++ GDGPI LVL PTRELAQQ+Q+VA G +R+TC++GGAPK
Sbjct: 113 FILPGIVHINHQPLLQPGDGPIVLVLCPTRELAQQVQEVAYSVGKHCKLRSTCIYGGAPK 172
Query: 204 REQARDLERGVEIVIAT 254
Q R+LERGVEI IAT
Sbjct: 173 GPQIRELERGVEICIAT 189
Score = 44.4 bits (100), Expect = 9e-05
Identities = 21/46 (45%), Positives = 30/46 (65%)
Frame = +1
Query: 508 NHNILQIVDICQEHEKENKLNVLLQEIGQSQEPGAKTIIFVETKRK 645
NH ILQIVD+C++HEKE+ + + G +T+IF ETKR+
Sbjct: 275 NHKILQIVDVCEDHEKEHNVGSFIG--GIVILSSLQTLIFTETKRR 318
>SB_25090| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1170
Score = 99 bits (238), Expect = 2e-21
Identities = 45/82 (54%), Positives = 65/82 (79%), Gaps = 4/82 (4%)
Frame = +2
Query: 257 GRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQI----RPDRQTLMWSAT 424
GRL DF+EKG +L+ +L+LDEADRMLDMGFEP IR+I+E + + +RQTLM+SAT
Sbjct: 847 GRLTDFIEKGKVSLKGLQFLILDEADRMLDMGFEPAIRRIVESMGMPDKSERQTLMFSAT 906
Query: 425 WPKEVKKLAEDYLGDYIQINIG 490
+P+E+++LA D+L DY+ + +G
Sbjct: 907 FPEEIQRLAGDFLNDYLFLTVG 928
Score = 57.2 bits (132), Expect = 1e-08
Identities = 31/88 (35%), Positives = 44/88 (50%), Gaps = 4/88 (4%)
Frame = +3
Query: 3 GSGKTLAYILPAIVHINN----QPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYV 170
GSGKT A++LP + + N P A+ +APTRELA QI A F H + +
Sbjct: 758 GSGKTAAFLLPVMTSMMNAGLTSSSFSETQTPQAMCIAPTRELANQIYLEARKFAHGTML 817
Query: 171 RNTCVFGGAPKREQARDLERGVEIVIAT 254
R +GG Q R L+ G +++ T
Sbjct: 818 RPVVCYGGVSVSHQLRQLQSGCNLLVGT 845
>SB_30826| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1375
Score = 95.9 bits (228), Expect = 3e-20
Identities = 51/99 (51%), Positives = 68/99 (68%), Gaps = 7/99 (7%)
Frame = +2
Query: 221 LGEGSRNSHCY---SGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQ-I 388
L E RN H GRL+D +++G L +LVLDEADRMLDMGFEPQIR+I++Q
Sbjct: 969 LRELDRNCHLLVATPGRLVDMMDRGRVGLDSIRFLVLDEADRMLDMGFEPQIRRIVDQDS 1028
Query: 389 RPD---RQTLMWSATWPKEVKKLAEDYLGDYIQINIGSL 496
P RQTLM+SAT+PKE++ LA D+L +YI + +G +
Sbjct: 1029 MPKTGIRQTLMFSATFPKEIQMLARDFLENYIFLAVGKV 1067
Score = 33.1 bits (72), Expect = 0.21
Identities = 19/61 (31%), Positives = 28/61 (45%), Gaps = 1/61 (1%)
Frame = +3
Query: 75 GDGPIALVLAPT-RELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIA 251
G G A L P + + DF + S R V+GGA Q R+L+R +++A
Sbjct: 922 GSGKTAAFLIPILSRIYMEGPPAPPDFSYRSLCRPCVVYGGADIGSQLRELDRNCHLLVA 981
Query: 252 T 254
T
Sbjct: 982 T 982
>SB_16431| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 790
Score = 94.7 bits (225), Expect = 6e-20
Identities = 45/84 (53%), Positives = 57/84 (67%)
Frame = +3
Query: 3 GSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNTC 182
GSGKT A++ PA+VHI +QP ++ GDGPI L+ APTREL QQI A FG +
Sbjct: 564 GSGKTAAFLWPALVHIMDQPELQVGDGPIVLICAPTRELCQQIYTEARRFGKAYNIHVVA 623
Query: 183 VFGGAPKREQARDLERGVEIVIAT 254
VFGG K EQ++ L+ G EIV+AT
Sbjct: 624 VFGGGNKYEQSKALQEGAEIVVAT 647
Score = 61.3 bits (142), Expect = 7e-10
Identities = 40/95 (42%), Positives = 51/95 (53%)
Frame = +2
Query: 212 SPGLGEGSRNSHCYSGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQIR 391
S L EG+ GRLID ++ TNL R TYLV DEADRM DMGF
Sbjct: 634 SKALQEGAEIVVATPGRLIDHVKAKATNLHRVTYLVFDEADRMFDMGF------------ 681
Query: 392 PDRQTLMWSATWPKEVKKLAEDYLGDYIQINIGSL 496
L++SAT+ K+V+ L D L D +++ IG L
Sbjct: 682 ----ALLFSATFKKKVEHLCRDILVDPVRVVIGEL 712
>SB_3952| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 592
Score = 94.7 bits (225), Expect = 6e-20
Identities = 53/101 (52%), Positives = 65/101 (64%), Gaps = 11/101 (10%)
Frame = +2
Query: 221 LGEGSRNSHCYSGRLIDFLEKGT---TNLQRCTYLVLDEADRMLDMGFEPQIRK------ 373
L G+ C GR+ID L TN QRCTYLVLDEADRM DMGFEPQI K
Sbjct: 191 LKRGAEIIVCTPGRMIDMLTANNGRVTNCQRCTYLVLDEADRMFDMGFEPQITKIRYPKV 250
Query: 374 --IIEQIRPDRQTLMWSATWPKEVKKLAEDYLGDYIQINIG 490
II+ IRPDRQT+M+SAT+P++++ LA L I+I +G
Sbjct: 251 MRIIDCIRPDRQTVMFSATFPRQMEALARKILDKPIEIQVG 291
Score = 57.6 bits (133), Expect = 9e-09
Identities = 31/81 (38%), Positives = 43/81 (53%)
Frame = +3
Query: 12 KTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFG 191
K +Y P + P I G IA+V+ PTRELA QI + F + +R CV+G
Sbjct: 121 KKNSYEKPTPIQAQAIPVIMSGRDMIAIVMTPTRELAIQIHRECKKFCKPNNLRCVCVYG 180
Query: 192 GAPKREQARDLERGVEIVIAT 254
G EQ +L+RG EI++ T
Sbjct: 181 GTGISEQIAELKRGAEIIVCT 201
>SB_19958| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 797
Score = 73.3 bits (172), Expect = 2e-13
Identities = 39/83 (46%), Positives = 55/83 (66%), Gaps = 5/83 (6%)
Frame = +2
Query: 257 GRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQ----IRPDRQTLMWSAT 424
GRL DF+ + L +L+LDEADRMLD+GF P I K+IE+ + RQTLM+SAT
Sbjct: 611 GRLQDFVSREKIYLGSIQHLILDEADRMLDLGFGPDIHKLIEESNMTAKESRQTLMFSAT 670
Query: 425 WPKEVKKLAEDYL-GDYIQINIG 490
+P E++ LA +L DY+ + +G
Sbjct: 671 FPDEIQHLAGSFLKPDYLFLAVG 693
Score = 60.1 bits (139), Expect = 2e-09
Identities = 33/84 (39%), Positives = 45/84 (53%)
Frame = +3
Query: 3 GSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNTC 182
GSGKT AY+LP + + Q P+AL +APTRELA+QI A F + ++
Sbjct: 526 GSGKTAAYMLPVLTSLIKQGLNAPPRSPLALCVAPTRELAKQIYIEARKFSDHTPIKVCV 585
Query: 183 VFGGAPKREQARDLERGVEIVIAT 254
+GG QA LERG ++ T
Sbjct: 586 CYGGVSVPYQASQLERGCHFLVGT 609
>SB_29417| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 268
Score = 70.1 bits (164), Expect = 2e-12
Identities = 29/55 (52%), Positives = 43/55 (78%)
Frame = +2
Query: 347 MGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAEDYLGDYIQINIGSLQLSAI 511
MGFEP+I+KI+ IRPDRQT+M SATWP V+++A+ Y+ D +++ +G L L+ I
Sbjct: 1 MGFEPEIKKILLDIRPDRQTVMTSATWPPGVQRMADQYMTDPVRVFVGCLDLNVI 55
>SB_59075| Best HMM Match : Helicase_C (HMM E-Value=1.3e-19)
Length = 445
Score = 69.7 bits (163), Expect = 2e-12
Identities = 31/66 (46%), Positives = 44/66 (66%)
Frame = +2
Query: 293 NLQRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAEDYLGDY 472
N+ YLVLDEADRM+DMGFE +R I + RQTL++SAT PK+++ A+ L
Sbjct: 13 NVSPYRYLVLDEADRMIDMGFEEDVRTIFSYFKSQRQTLLFSATMPKKIQNFAKSALVKP 72
Query: 473 IQINIG 490
+ +N+G
Sbjct: 73 VTVNVG 78
>SB_55073| Best HMM Match : Helicase_C (HMM E-Value=1.3e-19)
Length = 212
Score = 69.7 bits (163), Expect = 2e-12
Identities = 31/66 (46%), Positives = 44/66 (66%)
Frame = +2
Query: 293 NLQRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAEDYLGDY 472
N+ YLVLDEADRM+DMGFE +R I + RQTL++SAT PK+++ A+ L
Sbjct: 13 NVSPYRYLVLDEADRMIDMGFEEDVRTIFSYFKSQRQTLLFSATMPKKIQNFAKSALVKP 72
Query: 473 IQINIG 490
+ +N+G
Sbjct: 73 VTVNVG 78
>SB_17563| Best HMM Match : DEAD (HMM E-Value=0)
Length = 439
Score = 68.5 bits (160), Expect = 5e-12
Identities = 31/90 (34%), Positives = 57/90 (63%), Gaps = 1/90 (1%)
Frame = +2
Query: 257 GRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSATWPKE 436
GR++D ++K ++ +C LV+DEAD++L M F+ + +II+ + +RQ L++SAT+P
Sbjct: 181 GRVLDLMKKKLADMSKCQMLVMDEADKLLSMDFKKMLEQIIKHLPENRQILLFSATFPIS 240
Query: 437 VKKLAEDYLGDYIQINI-GSLQLSAITTFF 523
V+ E +L +IN+ L L +T ++
Sbjct: 241 VRDFKEKHLRKPYEINLMDELTLHGVTQYY 270
Score = 35.9 bits (79), Expect = 0.030
Identities = 20/51 (39%), Positives = 28/51 (54%)
Frame = +3
Query: 3 GSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 155
G+GKT AY++P + + + ALVL PTRELA Q Q+ + G
Sbjct: 94 GTGKTAAYLVPLLERTDTTKNCIQ-----ALVLVPTRELALQTSQICIELG 139
>SB_2247| Best HMM Match : DEAD (HMM E-Value=0)
Length = 439
Score = 68.5 bits (160), Expect = 5e-12
Identities = 31/90 (34%), Positives = 57/90 (63%), Gaps = 1/90 (1%)
Frame = +2
Query: 257 GRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSATWPKE 436
GR++D ++K ++ +C LV+DEAD++L M F+ + +II+ + +RQ L++SAT+P
Sbjct: 181 GRVLDLMKKKLADMSKCQMLVMDEADKLLSMDFKKMLEQIIKHLPENRQILLFSATFPIS 240
Query: 437 VKKLAEDYLGDYIQINI-GSLQLSAITTFF 523
V+ E +L +IN+ L L +T ++
Sbjct: 241 VRDFKEKHLRKPYEINLMDELTLHGVTQYY 270
Score = 35.9 bits (79), Expect = 0.030
Identities = 20/51 (39%), Positives = 28/51 (54%)
Frame = +3
Query: 3 GSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 155
G+GKT AY++P + + + ALVL PTRELA Q Q+ + G
Sbjct: 94 GTGKTAAYLVPLLERTDTTKNCIQ-----ALVLVPTRELALQTSQICIELG 139
>SB_52320| Best HMM Match : DEAD (HMM E-Value=0)
Length = 340
Score = 66.9 bits (156), Expect = 1e-11
Identities = 38/79 (48%), Positives = 50/79 (63%), Gaps = 3/79 (3%)
Frame = +2
Query: 248 CYSGRLIDFLEKGTTNLQRCT---YLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWS 418
C GRL+ +++ T N CT LVLDEADR+LDMGF P + IIE + +RQTL++S
Sbjct: 177 CTPGRLLQHMDE-TPNFD-CTSLQILVLDEADRILDMGFAPTLNAIIENLPSERQTLLYS 234
Query: 419 ATWPKEVKKLAEDYLGDYI 475
AT + VK LA L Y+
Sbjct: 235 ATQTRSVKDLARLSLQSYV 253
Score = 46.8 bits (106), Expect = 2e-05
Identities = 30/81 (37%), Positives = 44/81 (54%), Gaps = 1/81 (1%)
Frame = +3
Query: 3 GSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNTC 182
GSGKTLA+++P I + Q DG ALV++PTRELA Q +V G+ +
Sbjct: 97 GSGKTLAFLIPIIETLWRQKWTSM-DGLGALVISPTRELAYQTFEVLVKIGNKHDLSAGL 155
Query: 183 VFGGAP-KREQARDLERGVEI 242
+ GG K EQ R ++ + +
Sbjct: 156 IIGGKDLKNEQKRIMKTNIVV 176
>SB_45898| Best HMM Match : DEAD (HMM E-Value=1.3e-36)
Length = 428
Score = 64.1 bits (149), Expect = 1e-10
Identities = 34/71 (47%), Positives = 43/71 (60%), Gaps = 4/71 (5%)
Frame = +3
Query: 3 GSGKTLAYILPAIVHINNQPPIRRGD----GPIALVLAPTRELAQQIQQVAADFGHTSYV 170
GSGKT A+ +P +V I P I R + GP AL+LAPTRELAQQI++ FG +
Sbjct: 148 GSGKTAAFAIPLLVWIMGLPKIERDNDADQGPYALILAPTRELAQQIEEEILKFGRPLGI 207
Query: 171 RNTCVFGGAPK 203
R V GGA +
Sbjct: 208 RTVSVIGGADR 218
Score = 45.6 bits (103), Expect = 4e-05
Identities = 29/76 (38%), Positives = 45/76 (59%), Gaps = 24/76 (31%)
Frame = +2
Query: 308 TYLVLDEADRMLDMGFEPQIRKIIE-----QIRPD-------------------RQTLMW 415
T V+ ADRM+DMGFEP+++KI+E ++PD RQT+M+
Sbjct: 209 TVSVIGGADRMIDMGFEPEVQKILEHLPVSNVKPDSEDSEDPEHLLTHMGKDKYRQTVMF 268
Query: 416 SATWPKEVKKLAEDYL 463
+AT P +V++LA++YL
Sbjct: 269 TATMPPQVERLAKNYL 284
>SB_43842| Best HMM Match : RNB (HMM E-Value=0)
Length = 1238
Score = 61.7 bits (143), Expect = 5e-10
Identities = 32/69 (46%), Positives = 45/69 (65%), Gaps = 3/69 (4%)
Frame = +2
Query: 293 NLQRCTYLVLDEADRMLDMGFEPQIRKII---EQIRPDRQTLMWSATWPKEVKKLAEDYL 463
+L + TYLV+DE DRML MG E Q+RKI+ RQTL+WSAT P+ +++LA +
Sbjct: 230 DLYKITYLVMDEPDRMLGMGMEEQLRKIVGLATGTSRARQTLLWSATLPESLERLARSAV 289
Query: 464 GDYIQINIG 490
+ I I +G
Sbjct: 290 LNPITIQVG 298
Score = 54.0 bits (124), Expect = 1e-07
Identities = 24/43 (55%), Positives = 30/43 (69%)
Frame = +3
Query: 3 GSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQI 131
GSGKTLAY LP + + + P GD P+AL+L PTREL QQ+
Sbjct: 119 GSGKTLAYSLPLCMLLRTKAPSNPGDTPVALILTPTRELMQQV 161
>SB_56998| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 478
Score = 61.3 bits (142), Expect = 7e-10
Identities = 37/128 (28%), Positives = 61/128 (47%), Gaps = 2/128 (1%)
Frame = +2
Query: 152 WTHILCS*HVCVWWCS*KRASPGLGEGSRNSHCYSGRLIDFLEKGTTNLQRCTYLVLDEA 331
+ H+ C H C+ + + L EG GR+ D + +G N + VLDEA
Sbjct: 185 YMHVKC--HACIGGTNVREDRMKLEEGVHVVVGTPGRVFDMINRGVLNTRDIKLFVLDEA 242
Query: 332 DRMLDMGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAEDYLGDYIQINI--GSLQLS 505
D ML GF+ QI + ++ Q ++ SAT P +V ++ ++ D ++I + + L
Sbjct: 243 DEMLSRGFKDQIYDVFTRLPTSVQVVLLSATMPTDVLEVTNKFMRDVVRILVKREEVTLE 302
Query: 506 AITTFFKL 529
I FF L
Sbjct: 303 GIKQFFVL 310
Score = 60.5 bits (140), Expect = 1e-09
Identities = 35/85 (41%), Positives = 46/85 (54%), Gaps = 1/85 (1%)
Frame = +3
Query: 3 GSGKTLAYILPAIVHINNQPPIRRG-DGPIALVLAPTRELAQQIQQVAADFGHTSYVRNT 179
G+GKT + + + I+ + G D ALVLAPTRELAQQIQ+V G +V+
Sbjct: 132 GTGKTATFAISILQEIDTNYKDKNGCDCCQALVLAPTRELAQQIQKVVLALGDYMHVKCH 191
Query: 180 CVFGGAPKREQARDLERGVEIVIAT 254
GG RE LE GV +V+ T
Sbjct: 192 ACIGGTNVREDRMKLEEGVHVVVGT 216
>SB_14524| Best HMM Match : DEAD (HMM E-Value=3.7e-17)
Length = 500
Score = 60.9 bits (141), Expect = 9e-10
Identities = 28/82 (34%), Positives = 50/82 (60%)
Frame = +2
Query: 257 GRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSATWPKE 436
GR+++ + + +L V+DE D ML +GFE Q+++I+E++ RQT+++SAT P
Sbjct: 264 GRMVEIISRQAVDLTHVIGCVVDEVDTMLQLGFEQQVQQILERLSNRRQTMLFSATIPPS 323
Query: 437 VKKLAEDYLGDYIQINIGSLQL 502
++ +A L + I+ GS L
Sbjct: 324 IEAMASRLLNAPVFISAGSPSL 345
>SB_37351| Best HMM Match : DEAD (HMM E-Value=0)
Length = 688
Score = 60.5 bits (140), Expect = 1e-09
Identities = 30/74 (40%), Positives = 48/74 (64%), Gaps = 5/74 (6%)
Frame = +2
Query: 257 GRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKII----EQIRPDR-QTLMWSA 421
GR++DF+ +GT +L + ++VLDE DRMLDMGF + +++ + R D+ QTL++SA
Sbjct: 204 GRILDFMRQGTLDLSKLKHVVLDEVDRMLDMGFAESVEEVLAASYAEDREDKPQTLLFSA 263
Query: 422 TWPKEVKKLAEDYL 463
T P A+ Y+
Sbjct: 264 TLPPWAVNTAKKYM 277
Score = 54.8 bits (126), Expect = 6e-08
Identities = 28/85 (32%), Positives = 49/85 (57%), Gaps = 1/85 (1%)
Frame = +3
Query: 3 GSGKTLAYILPAIVHINN-QPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNT 179
G+GKTL++ LP + + + + +RG P LV+APTRELA+Q+ + S +
Sbjct: 120 GTGKTLSFALPLVEKLQDGKLSQKRGRAPKVLVMAPTRELAKQVGNEFENL--KSNLEVY 177
Query: 180 CVFGGAPKREQARDLERGVEIVIAT 254
C++GG P Q + G+++++ T
Sbjct: 178 CIYGGMPYEPQENAINSGLDVLVGT 202
>SB_37968| Best HMM Match : DEAD (HMM E-Value=3.6)
Length = 127
Score = 60.1 bits (139), Expect = 2e-09
Identities = 28/58 (48%), Positives = 42/58 (72%)
Frame = +2
Query: 314 LVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAEDYLGDYIQINI 487
LVLDEADRMLDMGF IR+++ ++ RQ L++SAT+ ++K LAE L + ++I +
Sbjct: 7 LVLDEADRMLDMGFIHDIRRVLTKLPAKRQNLLFSATFSDDIKALAEKLLHNPLEIEV 64
>SB_52411| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 370
Score = 57.6 bits (133), Expect = 9e-09
Identities = 31/91 (34%), Positives = 48/91 (52%), Gaps = 2/91 (2%)
Frame = +2
Query: 257 GRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSATWPKE 436
GR+ D + + + LVLDEAD ML+ GF+ QI + + P Q ++ SAT P E
Sbjct: 124 GRVFDMIRRRNLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVVLLSATLPHE 183
Query: 437 VKKLAEDYLGDYIQINI--GSLQLSAITTFF 523
+ ++ ++ D I+I + L L I FF
Sbjct: 184 ILEMTSKFMTDPIRILVKRDELTLEGIKQFF 214
Score = 48.0 bits (109), Expect = 7e-06
Identities = 33/84 (39%), Positives = 43/84 (51%)
Frame = +3
Query: 3 GSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNTC 182
G+GKT + + + I+ Q +R P ALVL+PTRELA QIQ+V G V+
Sbjct: 44 GTGKTATFSISVLQAIDTQ--LRE---PQALVLSPTRELANQIQKVVLALGDYMSVQCHA 98
Query: 183 VFGGAPKREQARDLERGVEIVIAT 254
GG E R L+ G IV T
Sbjct: 99 CIGGTNIGEDIRKLDYGQHIVSGT 122
>SB_11691| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1448
Score = 56.0 bits (129), Expect = 3e-08
Identities = 30/67 (44%), Positives = 46/67 (68%), Gaps = 1/67 (1%)
Frame = +2
Query: 257 GRLIDFLEKGTTNLQR-CTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSATWPK 433
GRL+D L+ L + LV+DEADR+L++GFE ++R+II + RQT+++SAT K
Sbjct: 703 GRLLDHLQNTQGFLYKNLQCLVIDEADRILEIGFEEEMRQIIRILPSKRQTVLFSATQTK 762
Query: 434 EVKKLAE 454
V+ LA+
Sbjct: 763 NVEDLAK 769
Score = 53.2 bits (122), Expect = 2e-07
Identities = 28/84 (33%), Positives = 49/84 (58%)
Frame = +3
Query: 3 GSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNTC 182
GSGKTLA+++P +V + + + +G ++++PTREL+ Q VA D
Sbjct: 619 GSGKTLAFLVP-VVELLYKLQFKTRNGTGVIIISPTRELSLQTYGVARDLLKHHNFTYGI 677
Query: 183 VFGGAPKREQARDLERGVEIVIAT 254
+ GG ++ +A L++GV ++IAT
Sbjct: 678 IMGGVNRKAEAERLQKGVNLLIAT 701
>SB_34731| Best HMM Match : DEAD (HMM E-Value=3.8e-31)
Length = 978
Score = 53.6 bits (123), Expect = 1e-07
Identities = 33/89 (37%), Positives = 48/89 (53%), Gaps = 5/89 (5%)
Frame = +3
Query: 3 GSGKTLAYILPAIVHINNQPPIRRG-----DGPIALVLAPTRELAQQIQQVAADFGHTSY 167
GSGKTLAY+ P +VH + R G P A ++ P RELA QI + A H +
Sbjct: 425 GSGKTLAYLAP-LVHRLREDEERHGILARLKRPRACIVVPARELATQILKTAKSLCHHAR 483
Query: 168 VRNTCVFGGAPKREQARDLERGVEIVIAT 254
R+ + GG ++ DLE V++++AT
Sbjct: 484 FRSVGLIGGRKQKWMRDDLESPVDLLVAT 512
Score = 31.5 bits (68), Expect = 0.65
Identities = 15/44 (34%), Positives = 23/44 (52%)
Frame = +2
Query: 257 GRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQI 388
G L+ + +K T+LV+DEAD M D F+ +I+ I
Sbjct: 514 GTLLKYRQKDRLFFSDLTHLVIDEADTMFDASFKSLTMEILHTI 557
>SB_9558| Best HMM Match : DEAD (HMM E-Value=0)
Length = 436
Score = 52.4 bits (120), Expect = 3e-07
Identities = 26/57 (45%), Positives = 38/57 (66%), Gaps = 1/57 (1%)
Frame = +2
Query: 257 GRLIDFLEK-GTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSAT 424
GRL D ++ T NL++ +LVLDEADR+LD F ++ I + + RQTL++SAT
Sbjct: 134 GRLADHIKSTDTLNLKKIQFLVLDEADRLLDPSFGDDLKVIFDAVPEKRQTLLFSAT 190
Score = 47.2 bits (107), Expect = 1e-05
Identities = 31/84 (36%), Positives = 41/84 (48%)
Frame = +3
Query: 3 GSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNTC 182
GSGKT A+ LP + + + P G A+VL PTRELA QI G ++
Sbjct: 54 GSGKTAAFALPILQKLCDDPY-----GIFAVVLTPTRELAFQIADQFKVLGRPIGLKEAV 108
Query: 183 VFGGAPKREQARDLERGVEIVIAT 254
+ GG +QA L +VIAT
Sbjct: 109 IVGGLDMMKQALSLANKPHVVIAT 132
>SB_18655| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 697
Score = 46.8 bits (106), Expect = 2e-05
Identities = 35/98 (35%), Positives = 50/98 (51%), Gaps = 14/98 (14%)
Frame = +3
Query: 3 GSGKTLAYILPAIVHIN-------NQPPI-------RRGDGPIALVLAPTRELAQQIQQV 140
GSGKTLA+ +P I HI Q P +G +AL++APTRELA Q++
Sbjct: 178 GSGKTLAFGIPIIQHIEAYKKRKAEQSPSDKESDLESQGYPLLALIMAPTRELALQVKDH 237
Query: 141 AADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIAT 254
+ V+ + GG +Q R L++ EIV+AT
Sbjct: 238 LVKAAKYTSVKVAAIVGGMAAPKQQRLLKQRPEIVVAT 275
Score = 39.1 bits (87), Expect = 0.003
Identities = 17/37 (45%), Positives = 25/37 (67%)
Frame = +2
Query: 278 EKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQI 388
EK +N+Q YLV+DEADRM++ G ++ I+E I
Sbjct: 331 EKHVSNIQLLRYLVIDEADRMVEQGHYEELSSILELI 367
>SB_44408| Best HMM Match : DEAD (HMM E-Value=6.8005e-42)
Length = 238
Score = 45.2 bits (102), Expect = 5e-05
Identities = 31/84 (36%), Positives = 41/84 (48%)
Frame = +3
Query: 3 GSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNTC 182
GSGKT A+ LP + + + P AL+L PTRELA QI + G V+
Sbjct: 11 GSGKTGAFALPILQALLDNP-----QRLFALILTPTRELAFQISEQCEALGSGIGVKCAV 65
Query: 183 VFGGAPKREQARDLERGVEIVIAT 254
+ GG QA L + I+IAT
Sbjct: 66 IVGGIDMMSQALMLAKKPHIIIAT 89
Score = 38.7 bits (86), Expect = 0.004
Identities = 22/38 (57%), Positives = 28/38 (73%), Gaps = 2/38 (5%)
Frame = +2
Query: 257 GRLIDFLE--KGTTNLQRCTYLVLDEADRMLDMGFEPQ 364
GRLID LE KG + L+ YLV+DEADR+L+M FE +
Sbjct: 91 GRLIDHLENTKGFS-LRTLKYLVMDEADRILNMDFEKE 127
>SB_45527| Best HMM Match : DEAD (HMM E-Value=0.0069)
Length = 120
Score = 43.6 bits (98), Expect = 2e-04
Identities = 26/57 (45%), Positives = 30/57 (52%)
Frame = +3
Query: 84 PIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIAT 254
P ALVL+PTRELA QIQ+V G V+ GG E R L+ G IV T
Sbjct: 4 PQALVLSPTRELANQIQKVVLALGDYMSVQCHACIGGTNIGEDIRKLDYGQHIVSGT 60
>SB_32980| Best HMM Match : DEAD (HMM E-Value=0)
Length = 985
Score = 43.6 bits (98), Expect = 2e-04
Identities = 21/78 (26%), Positives = 44/78 (56%), Gaps = 2/78 (2%)
Frame = +2
Query: 257 GRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSATWPKE 436
GR+ +E+ + +LDEAD++LD F+ QI I + ++Q + +SAT+P+
Sbjct: 140 GRVKYLIEQKYLKTESVRMFILDEADKLLDESFQQQINWIFSALPENKQMMAFSATYPEV 199
Query: 437 VKKLAEDYLGD--YIQIN 484
+ + Y+ + ++++N
Sbjct: 200 LANHLKKYMTEPTFVRLN 217
Score = 28.7 bits (61), Expect = 4.6
Identities = 23/85 (27%), Positives = 39/85 (45%), Gaps = 1/85 (1%)
Frame = +3
Query: 3 GSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNTC 182
G+GKT + + A+ ++ I + ++L PTRE+A Q++ V G Y C
Sbjct: 60 GTGKTCVFSVIALENV-----ITESNCIQIIILTPTREIAVQVKDVICAIG-CHYDGLAC 113
Query: 183 -VFGGAPKREQARDLERGVEIVIAT 254
VF G E+ + + I + T
Sbjct: 114 KVFIGGISLEEDKKALKSCHIAVGT 138
>SB_40196| Best HMM Match : DEAD (HMM E-Value=3.5e-07)
Length = 456
Score = 42.3 bits (95), Expect = 3e-04
Identities = 26/88 (29%), Positives = 42/88 (47%), Gaps = 4/88 (4%)
Frame = +3
Query: 3 GSGKTLAYILPAIVHINNQPPIRR---GDGPIALVLAPTRELAQQIQQVAAD-FGHTSYV 170
GSGK LAY+LP I I + +GP+ L+L + ++ V D +
Sbjct: 234 GSGKRLAYLLPIIHQITESSVYQELPLANGPLVLILCTNWQNTARVYGVCEDLIRNRRRT 293
Query: 171 RNTCVFGGAPKREQARDLERGVEIVIAT 254
R +FGG + ++ L G E+++AT
Sbjct: 294 RVQMIFGGGAEEDRIVPLINGCEVLVAT 321
>SB_38262| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1039
Score = 41.5 bits (93), Expect = 6e-04
Identities = 22/64 (34%), Positives = 36/64 (56%)
Frame = +3
Query: 3 GSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNTC 182
GSGKT A+++P + G AL+L+PTRELA Q Q+ + G + ++++
Sbjct: 328 GSGKTAAFLIPMFEKLQTHTA---KVGIRALILSPTRELALQTQKFIKELGRFTGLKSSV 384
Query: 183 VFGG 194
+ GG
Sbjct: 385 ILGG 388
>SB_53656| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 51
Score = 37.1 bits (82), Expect = 0.013
Identities = 16/37 (43%), Positives = 25/37 (67%)
Frame = +2
Query: 278 EKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQI 388
E+ +N+Q YLV+DEADRM++ G ++ I+E I
Sbjct: 2 EEHVSNVQLLRYLVIDEADRMVEQGHYEELSSILELI 38
>SB_46680| Best HMM Match : Helicase_C (HMM E-Value=3.8e-22)
Length = 1058
Score = 37.1 bits (82), Expect = 0.013
Identities = 29/100 (29%), Positives = 53/100 (53%), Gaps = 6/100 (6%)
Frame = +2
Query: 260 RLIDFL--EKGTTNLQRCTYLVLDEADRMLDM---GFEPQIRKIIEQI-RPDRQTLMWSA 421
RL+ L E L +L+LDEAD++ + GF QI I + +PD ++SA
Sbjct: 266 RLVHLLTQEPPGIELHNVEWLILDEADKLFEEGKDGFREQIATIYQACNKPDIHRGLFSA 325
Query: 422 TWPKEVKKLAEDYLGDYIQINIGSLQLSAITTFFKL*IFV 541
T +++ A +L +++++ +G ++ SA T + +FV
Sbjct: 326 TLSNGIEEWAGLHLDNHVRVTVG-IRNSATATVDQELLFV 364
Score = 27.9 bits (59), Expect = 8.0
Identities = 16/39 (41%), Positives = 22/39 (56%), Gaps = 3/39 (7%)
Frame = +3
Query: 24 YILPAIVHINNQPPIRRG---DGPIALVLAPTRELAQQI 131
Y P + + P + G G A+V++PTRELAQQI
Sbjct: 183 YTTPTPIQMQATPLMAHGPKKSGFRAVVVSPTRELAQQI 221
>SB_57459| Best HMM Match : DEAD (HMM E-Value=1.50001e-40)
Length = 490
Score = 33.9 bits (74), Expect = 0.12
Identities = 24/76 (31%), Positives = 40/76 (52%), Gaps = 3/76 (3%)
Frame = +3
Query: 3 GSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG-HTSYVR-N 176
G+GKT A++L + ++ P P + L+PT ELA+Q +VA G H +++ N
Sbjct: 152 GTGKTAAFVLTMLSRVDATKPY-----PQVICLSPTYELARQTGKVAEAMGKHCPHIKIN 206
Query: 177 TCVFGGA-PKREQARD 221
V G P+ ++ D
Sbjct: 207 YAVRGNQFPRGQKCTD 222
>SB_10917| Best HMM Match : SPRY (HMM E-Value=1.4e-17)
Length = 635
Score = 32.7 bits (71), Expect = 0.28
Identities = 16/44 (36%), Positives = 24/44 (54%)
Frame = +2
Query: 257 GRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQI 388
G+L DF+ +L + + +LDEAD +L G I KI +I
Sbjct: 144 GKLNDFITTDKISLHQVKFFILDEADGLLAQGNNDLIMKIYNKI 187
>SB_43466| Best HMM Match : DEAD (HMM E-Value=1.8)
Length = 210
Score = 32.3 bits (70), Expect = 0.37
Identities = 15/30 (50%), Positives = 19/30 (63%)
Frame = +2
Query: 314 LVLDEADRMLDMGFEPQIRKIIEQIRPDRQ 403
LVLDEAD ML+ GF+ QI + + P Q
Sbjct: 39 LVLDEADEMLNKGFKEQIYDVYRYLPPATQ 68
>SB_41683| Best HMM Match : DEAD (HMM E-Value=1.5e-27)
Length = 559
Score = 31.5 bits (68), Expect = 0.65
Identities = 24/57 (42%), Positives = 34/57 (59%), Gaps = 1/57 (1%)
Frame = +3
Query: 3 GSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELA-QQIQQVAADFGHTSYV 170
G+GK+L ++LP++ Q P RG G I +V PTRELA Q + +V+ G S V
Sbjct: 207 GTGKSLVFLLPSV-----QDP-GRGYGTIIVV--PTRELASQMLYEVSRLLGDKSIV 255
>SB_51015| Best HMM Match : DEAD (HMM E-Value=0.0057)
Length = 96
Score = 31.1 bits (67), Expect = 0.86
Identities = 17/42 (40%), Positives = 25/42 (59%)
Frame = +3
Query: 3 GSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQ 128
G+GKT A++LP + + +P + LV+ PTRELA Q
Sbjct: 57 GTGKTAAFMLPILERLLYRP--TQSPAIRVLVITPTRELAIQ 96
>SB_19286| Best HMM Match : WD40 (HMM E-Value=1.3)
Length = 135
Score = 31.1 bits (67), Expect = 0.86
Identities = 14/36 (38%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Frame = -2
Query: 344 PTYDQPHQELNMCTAVSWLC-PFPRNQLIYLSSNDY 240
P Y+Q +EL CT S C PF + ++ +SSN++
Sbjct: 99 PAYEQELRELTGCTTHSICCNPFTQRTILVISSNNW 134
>SB_57042| Best HMM Match : WD40 (HMM E-Value=4.9e-09)
Length = 707
Score = 31.1 bits (67), Expect = 0.86
Identities = 14/36 (38%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Frame = -2
Query: 344 PTYDQPHQELNMCTAVSWLC-PFPRNQLIYLSSNDY 240
P Y+Q +EL CT S C PF + ++ +SSN++
Sbjct: 99 PAYEQELRELTGCTTHSICCNPFTQRTILVISSNNW 134
>SB_50927| Best HMM Match : DEAD (HMM E-Value=3.2e-06)
Length = 368
Score = 30.3 bits (65), Expect = 1.5
Identities = 24/86 (27%), Positives = 44/86 (51%), Gaps = 1/86 (1%)
Frame = +2
Query: 233 SRNSHCYSGRLIDFLEKGTTNLQRCTYLVLDEA-DRMLDMGFEPQIRKIIEQIRPDRQTL 409
+R +C +G L+ + E +T L +++V+DE +R + F + + + RPD + +
Sbjct: 70 TRLLYCTTGILLRYFESDST-LAGVSHVVVDEVHERTEESDFLMMVLRDLIMERPDLRVI 128
Query: 410 MWSATWPKEVKKLAEDYLGDYIQINI 487
+ SAT KL +Y D I+I
Sbjct: 129 LMSATLD---SKLFSEYFYDAPVIHI 151
>SB_48046| Best HMM Match : DEAD (HMM E-Value=4e-38)
Length = 475
Score = 29.9 bits (64), Expect = 2.0
Identities = 11/30 (36%), Positives = 19/30 (63%)
Frame = +2
Query: 257 GRLIDFLEKGTTNLQRCTYLVLDEADRMLD 346
GR++ + T NL+ + +LDE D+ML+
Sbjct: 176 GRILALTREKTLNLKHAKHFILDECDKMLE 205
>SB_28853| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 208
Score = 29.9 bits (64), Expect = 2.0
Identities = 11/30 (36%), Positives = 19/30 (63%)
Frame = +2
Query: 257 GRLIDFLEKGTTNLQRCTYLVLDEADRMLD 346
GR++ + T NL+ + +LDE D+ML+
Sbjct: 176 GRILALTREKTLNLKHAKHFILDECDKMLE 205
>SB_36508| Best HMM Match : WD40 (HMM E-Value=0.006)
Length = 1103
Score = 29.5 bits (63), Expect = 2.6
Identities = 15/74 (20%), Positives = 32/74 (43%)
Frame = +1
Query: 388 TPRQTDFDVVSYLAQRSEETC*GLLGRLHSDQYRIITTFRNHNILQIVDICQEHEKENKL 567
T R+T ++ ++ QR E+TC + L + ++ + ++ + QEH+ E
Sbjct: 65 TRRKTGSELQKFIYQRYEDTCLVIYRELVDGDKHLAIAWQRETVPALIRLQQEHDFEKGQ 124
Query: 568 NVLLQEIGQSQEPG 609
+G + G
Sbjct: 125 GTNFGSVGNTSGAG 138
>SB_37956| Best HMM Match : Helicase_C (HMM E-Value=1.5e-27)
Length = 331
Score = 29.5 bits (63), Expect = 2.6
Identities = 15/47 (31%), Positives = 26/47 (55%)
Frame = +2
Query: 347 MGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAEDYLGDYIQINI 487
MGFE I I+ + R+T ++SAT EV+ L L + +++ +
Sbjct: 1 MGFEASINTILGYLPKQRRTGLFSATQTDEVEALVRAGLRNPVRVTV 47
>SB_33165| Best HMM Match : ABC_tran (HMM E-Value=0)
Length = 1310
Score = 29.1 bits (62), Expect = 3.5
Identities = 13/28 (46%), Positives = 19/28 (67%)
Frame = +2
Query: 296 LQRCTYLVLDEADRMLDMGFEPQIRKII 379
LQRC LVLDEA +D + Q++++I
Sbjct: 1219 LQRCKVLVLDEATANVDYRTDRQVQQLI 1246
>SB_17925| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1075
Score = 29.1 bits (62), Expect = 3.5
Identities = 13/28 (46%), Positives = 19/28 (67%)
Frame = +2
Query: 296 LQRCTYLVLDEADRMLDMGFEPQIRKII 379
LQRC LVLDEA +D + Q++++I
Sbjct: 984 LQRCKVLVLDEATANVDYRTDRQVQQLI 1011
>SB_24613| Best HMM Match : Ctr (HMM E-Value=0.73)
Length = 895
Score = 28.3 bits (60), Expect = 6.1
Identities = 16/44 (36%), Positives = 24/44 (54%)
Frame = +2
Query: 260 RLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQIR 391
R + LEKG + LDEAD+M+D F R+++E I+
Sbjct: 372 RQLRHLEKGKETCDQ----KLDEADKMIDAYFREMQRRLMEDIK 411
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,770,012
Number of Sequences: 59808
Number of extensions: 458548
Number of successful extensions: 1177
Number of sequences better than 10.0: 45
Number of HSP's better than 10.0 without gapping: 1078
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1156
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1757375282
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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