Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV120008.Seq
(681 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical pr... 136 1e-32
Z81449-4|CAB03765.1| 811|Caenorhabditis elegans Hypothetical pr... 96 2e-20
AC024810-3|AAU20831.1| 660|Caenorhabditis elegans Vasa- and bel... 96 2e-20
AC024810-2|AAK68520.1| 644|Caenorhabditis elegans Vasa- and bel... 96 2e-20
AC024810-1|AAF60764.1| 641|Caenorhabditis elegans Vasa- and bel... 96 2e-20
AF045641-1|AAK68386.1| 970|Caenorhabditis elegans Hypothetical ... 93 1e-19
AL034488-3|CAA22456.1| 504|Caenorhabditis elegans Hypothetical ... 91 7e-19
AC024859-14|AAY43989.1| 643|Caenorhabditis elegans Hypothetical... 91 9e-19
AC006665-5|AAF39907.1| 630|Caenorhabditis elegans Hypothetical ... 83 2e-16
U13070-1|AAK67224.1| 730|Caenorhabditis elegans Hypothetical pr... 80 1e-15
AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA ... 69 4e-12
AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line hel... 69 4e-12
U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase pr... 66 3e-11
U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein. 66 3e-11
U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GL... 66 3e-11
L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase pr... 66 3e-11
AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line hel... 66 3e-11
AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line he... 66 3e-11
AC006605-1|AAK85443.1| 430|Caenorhabditis elegans Conserved ger... 66 3e-11
Z29115-1|CAA82362.1| 489|Caenorhabditis elegans Hypothetical pr... 64 7e-11
AC024753-1|AAF60456.1| 732|Caenorhabditis elegans Hypothetical ... 63 2e-10
U13876-12|AAA21169.1| 363|Caenorhabditis elegans Hypothetical p... 59 3e-09
AF039720-12|AAB96704.1| 399|Caenorhabditis elegans Hypothetical... 58 8e-09
AC024844-2|AAK29954.2| 399|Caenorhabditis elegans Hypothetical ... 58 8e-09
AC024876-4|AAU05555.1| 825|Caenorhabditis elegans Hypothetical ... 57 1e-08
AC024876-3|AAU05556.1| 871|Caenorhabditis elegans Hypothetical ... 57 1e-08
Z12116-1|CAA78102.1| 402|Caenorhabditis elegans protein ( C.ele... 56 2e-08
U13876-3|AAA21170.1| 402|Caenorhabditis elegans Initiation fact... 56 2e-08
EU051652-1|ABS85191.1| 973|Caenorhabditis elegans MEL-46 protein. 55 4e-08
CU457744-1|CAM36366.2| 973|Caenorhabditis elegans Hypothetical ... 55 4e-08
AF067608-1|AAC17654.2| 544|Caenorhabditis elegans Hypothetical ... 52 3e-07
Z54327-6|CAA91120.1| 425|Caenorhabditis elegans Hypothetical pr... 52 4e-07
Z81094-7|CAB03153.2| 960|Caenorhabditis elegans Hypothetical pr... 51 9e-07
Z54327-7|CAD57690.1| 268|Caenorhabditis elegans Hypothetical pr... 50 1e-06
AC006661-5|AAF39890.2| 488|Caenorhabditis elegans Hypothetical ... 50 1e-06
AC006661-4|ABB88208.1| 561|Caenorhabditis elegans Hypothetical ... 50 1e-06
AC025726-23|AAK73934.1| 763|Caenorhabditis elegans Hypothetical... 50 2e-06
AF079508-1|AAC28387.1| 1156|Caenorhabditis elegans germline RNA ... 48 6e-06
AF039718-2|AAB96745.2| 1156|Caenorhabditis elegans Germ-line hel... 48 6e-06
U08102-1|AAB65852.1| 417|Caenorhabditis elegans putative RNA he... 46 2e-05
U80447-2|AAO38637.1| 579|Caenorhabditis elegans Hypothetical pr... 44 1e-04
U80447-1|AAB37806.1| 746|Caenorhabditis elegans Hypothetical pr... 44 1e-04
Z22177-1|CAA80151.1| 578|Caenorhabditis elegans Hypothetical pr... 43 2e-04
AF025451-4|AAL16306.1| 567|Caenorhabditis elegans Hypothetical ... 43 2e-04
AF025451-3|AAB71200.2| 634|Caenorhabditis elegans Hypothetical ... 43 2e-04
U64840-7|AAB04965.1| 340|Caenorhabditis elegans Hypothetical pr... 39 0.004
U53141-4|AAA96106.1| 528|Caenorhabditis elegans Mutator protein... 39 0.004
Z92785-2|CAB07200.1| 344|Caenorhabditis elegans Hypothetical pr... 33 0.25
Z75546-3|CAA99891.1| 581|Caenorhabditis elegans Hypothetical pr... 32 0.33
L17337-1|AAP68928.1| 593|Caenorhabditis elegans Hypothetical pr... 32 0.33
AF125963-6|AAK95885.1| 520|Caenorhabditis elegans Hypothetical ... 32 0.33
Z81481-6|CAB63435.1| 344|Caenorhabditis elegans Hypothetical pr... 32 0.44
Z50071-3|CAA90407.1| 613|Caenorhabditis elegans Hypothetical pr... 31 1.0
Z50071-2|CAA90406.1| 638|Caenorhabditis elegans Hypothetical pr... 31 1.0
Z50071-1|CAA90408.1| 1022|Caenorhabditis elegans Hypothetical pr... 31 1.0
U40933-4|AAA81674.1| 778|Caenorhabditis elegans Caenorhabditis ... 29 3.1
AF100656-7|AAF99964.2| 615|Caenorhabditis elegans Hypothetical ... 29 4.1
Z73907-1|CAA98124.1| 4753|Caenorhabditis elegans Hypothetical pr... 27 9.4
M96150-1|AAA28105.1| 4753|Caenorhabditis elegans LDL receptor-re... 27 9.4
AL021175-8|CAA15970.2| 201|Caenorhabditis elegans Hypothetical ... 27 9.4
AL021175-7|CAE54921.1| 329|Caenorhabditis elegans Hypothetical ... 27 9.4
>Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical
protein F58E10.3a protein.
Length = 561
Score = 136 bits (330), Expect = 1e-32
Identities = 61/84 (72%), Positives = 75/84 (89%)
Frame = +2
Query: 257 GRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSATWPKE 436
GRL+DFL+ GTTN+++C+YLVLDEADRMLDMGFEPQI+KII QIRPDRQTLM+SATWPKE
Sbjct: 261 GRLLDFLDNGTTNMKKCSYLVLDEADRMLDMGFEPQIKKIIGQIRPDRQTLMFSATWPKE 320
Query: 437 VKKLAEDYLGDYIQINIGSLQLSA 508
V+ LA D+ D +N+GSL+L+A
Sbjct: 321 VRALASDFQKDAAFLNVGSLELAA 344
Score = 116 bits (279), Expect = 2e-26
Identities = 54/84 (64%), Positives = 68/84 (80%)
Frame = +3
Query: 3 GSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNTC 182
GSGKTLA++LPA+VHI Q +RG+GP LVL PTRELAQQ+Q+V+ DF H+ ++ TC
Sbjct: 176 GSGKTLAFMLPALVHITKQAHRQRGEGPAVLVLLPTRELAQQVQEVSIDFCHSLGLKMTC 235
Query: 183 VFGGAPKREQARDLERGVEIVIAT 254
+FGGA K QARDLERGV+IV+AT
Sbjct: 236 LFGGASKGPQARDLERGVDIVVAT 259
Score = 53.6 bits (123), Expect = 1e-07
Identities = 28/46 (60%), Positives = 32/46 (69%)
Frame = +1
Query: 508 NHNILQIVDICQEHEKENKLNVLLQEIGQSQEPGAKTIIFVETKRK 645
NHNI Q+VDI +EH K+ KL LL I +E KTIIFVETKRK
Sbjct: 345 NHNITQVVDILEEHAKQAKLMELLNHIMNQKE--CKTIIFVETKRK 388
>Z81449-4|CAB03765.1| 811|Caenorhabditis elegans Hypothetical
protein C46F11.4 protein.
Length = 811
Score = 96.3 bits (229), Expect = 2e-20
Identities = 45/90 (50%), Positives = 63/90 (70%)
Frame = +2
Query: 227 EGSRNSHCYSGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQT 406
EG+ C GR+ID ++ G TN R T+LV DEADRM DMGFE Q++ I + +RPDRQ
Sbjct: 388 EGAEMVVCTPGRIIDLVKMGATNFLRTTFLVFDEADRMFDMGFEAQVKSISDHVRPDRQC 447
Query: 407 LMWSATWPKEVKKLAEDYLGDYIQINIGSL 496
LM+SAT+ ++V++LA D L D ++I G +
Sbjct: 448 LMFSATFKQKVERLARDALVDPVRIVQGEV 477
Score = 86.6 bits (205), Expect = 1e-17
Identities = 40/85 (47%), Positives = 57/85 (67%), Gaps = 1/85 (1%)
Frame = +3
Query: 3 GSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNTC 182
GSGKT AY+ PAIVHI +QP ++ G+GP+A+++ PTRELA Q+ Q A F + C
Sbjct: 312 GSGKTAAYLWPAIVHIMDQPDLKAGEGPVAVIVVPTRELAIQVFQEAKKFCKVYNINPIC 371
Query: 183 VFGGAPKREQARDLE-RGVEIVIAT 254
+GG K EQ+ +L+ G E+V+ T
Sbjct: 372 AYGGGSKWEQSNELQNEGAEMVVCT 396
>AC024810-3|AAU20831.1| 660|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform c protein.
Length = 660
Score = 95.9 bits (228), Expect = 2e-20
Identities = 50/82 (60%), Positives = 61/82 (74%), Gaps = 4/82 (4%)
Frame = +2
Query: 257 GRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPD---RQTLMWSATW 427
GRLID +E+G L C YLVLDEADRMLDMGFEPQIRKI+ Q P R T M+SAT+
Sbjct: 282 GRLIDIIEQGFIGLAGCRYLVLDEADRMLDMGFEPQIRKIVGQGMPPKTARTTAMFSATF 341
Query: 428 PKEVKKLAEDYLGD-YIQINIG 490
PKE++ LA+D+L D YI + +G
Sbjct: 342 PKEIQVLAKDFLKDNYIFLAVG 363
Score = 62.1 bits (144), Expect = 4e-10
Identities = 41/95 (43%), Positives = 53/95 (55%), Gaps = 11/95 (11%)
Frame = +3
Query: 3 GSGKTLAYILPAIVHINN------QPPI----RRGDGPIALVLAPTRELAQQIQQVAADF 152
GSGKT A++LP I HI +PP RR P ALVL+PTRELA QI + A F
Sbjct: 186 GSGKTAAFLLPIIQHILAGGPDMVKPPAFTNGRRTYYPCALVLSPTRELAIQIHKEATKF 245
Query: 153 GHTSYVRNTCVFGGAPK-REQARDLERGVEIVIAT 254
+ S ++ ++GG R+Q L G I+IAT
Sbjct: 246 SYKSNIQTAILYGGRENYRDQVNRLRAGTHILIAT 280
>AC024810-2|AAK68520.1| 644|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform b protein.
Length = 644
Score = 95.9 bits (228), Expect = 2e-20
Identities = 50/82 (60%), Positives = 61/82 (74%), Gaps = 4/82 (4%)
Frame = +2
Query: 257 GRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPD---RQTLMWSATW 427
GRLID +E+G L C YLVLDEADRMLDMGFEPQIRKI+ Q P R T M+SAT+
Sbjct: 266 GRLIDIIEQGFIGLAGCRYLVLDEADRMLDMGFEPQIRKIVGQGMPPKTARTTAMFSATF 325
Query: 428 PKEVKKLAEDYLGD-YIQINIG 490
PKE++ LA+D+L D YI + +G
Sbjct: 326 PKEIQVLAKDFLKDNYIFLAVG 347
Score = 62.1 bits (144), Expect = 4e-10
Identities = 41/95 (43%), Positives = 53/95 (55%), Gaps = 11/95 (11%)
Frame = +3
Query: 3 GSGKTLAYILPAIVHINN------QPPI----RRGDGPIALVLAPTRELAQQIQQVAADF 152
GSGKT A++LP I HI +PP RR P ALVL+PTRELA QI + A F
Sbjct: 170 GSGKTAAFLLPIIQHILAGGPDMVKPPAFTNGRRTYYPCALVLSPTRELAIQIHKEATKF 229
Query: 153 GHTSYVRNTCVFGGAPK-REQARDLERGVEIVIAT 254
+ S ++ ++GG R+Q L G I+IAT
Sbjct: 230 SYKSNIQTAILYGGRENYRDQVNRLRAGTHILIAT 264
>AC024810-1|AAF60764.1| 641|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform a protein.
Length = 641
Score = 95.9 bits (228), Expect = 2e-20
Identities = 50/82 (60%), Positives = 61/82 (74%), Gaps = 4/82 (4%)
Frame = +2
Query: 257 GRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPD---RQTLMWSATW 427
GRLID +E+G L C YLVLDEADRMLDMGFEPQIRKI+ Q P R T M+SAT+
Sbjct: 263 GRLIDIIEQGFIGLAGCRYLVLDEADRMLDMGFEPQIRKIVGQGMPPKTARTTAMFSATF 322
Query: 428 PKEVKKLAEDYLGD-YIQINIG 490
PKE++ LA+D+L D YI + +G
Sbjct: 323 PKEIQVLAKDFLKDNYIFLAVG 344
Score = 62.1 bits (144), Expect = 4e-10
Identities = 41/95 (43%), Positives = 53/95 (55%), Gaps = 11/95 (11%)
Frame = +3
Query: 3 GSGKTLAYILPAIVHINN------QPPI----RRGDGPIALVLAPTRELAQQIQQVAADF 152
GSGKT A++LP I HI +PP RR P ALVL+PTRELA QI + A F
Sbjct: 167 GSGKTAAFLLPIIQHILAGGPDMVKPPAFTNGRRTYYPCALVLSPTRELAIQIHKEATKF 226
Query: 153 GHTSYVRNTCVFGGAPK-REQARDLERGVEIVIAT 254
+ S ++ ++GG R+Q L G I+IAT
Sbjct: 227 SYKSNIQTAILYGGRENYRDQVNRLRAGTHILIAT 261
>AF045641-1|AAK68386.1| 970|Caenorhabditis elegans Hypothetical
protein F53H1.1 protein.
Length = 970
Score = 93.5 bits (222), Expect = 1e-19
Identities = 46/93 (49%), Positives = 63/93 (67%), Gaps = 3/93 (3%)
Frame = +2
Query: 221 LGEGSRNSHCYSGRLIDFLEKGT---TNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQIR 391
L G+ C GR+ID L + TNL+R TYLVLDEADRM D GFEPQI K++ IR
Sbjct: 424 LKRGAEIVVCTPGRMIDVLAANSGKVTNLRRVTYLVLDEADRMFDKGFEPQIMKVVNNIR 483
Query: 392 PDRQTLMWSATWPKEVKKLAEDYLGDYIQINIG 490
PD+QT+++SAT+P+ ++ LA L ++I +G
Sbjct: 484 PDKQTVLFSATFPRHMEALARKVLDKPVEILVG 516
Score = 90.6 bits (215), Expect = 9e-19
Identities = 43/84 (51%), Positives = 55/84 (65%)
Frame = +3
Query: 3 GSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNTC 182
GSGKTLA++LP HI +QP + GDGPIA++LAPTRELA Q + A F ++ C
Sbjct: 351 GSGKTLAFLLPMFRHILDQPELEEGDGPIAVILAPTRELAMQTYKEANKFAKPLGLKVAC 410
Query: 183 VFGGAPKREQARDLERGVEIVIAT 254
+GG EQ DL+RG EIV+ T
Sbjct: 411 TYGGVGISEQIADLKRGAEIVVCT 434
>AL034488-3|CAA22456.1| 504|Caenorhabditis elegans Hypothetical
protein Y54G11A.3 protein.
Length = 504
Score = 91.1 bits (216), Expect = 7e-19
Identities = 46/93 (49%), Positives = 61/93 (65%), Gaps = 3/93 (3%)
Frame = +2
Query: 257 GRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSATWPKE 436
GRL D G +L TY+VLDEADRMLDMGFE IR+I+ +IRPDR + SATWP+
Sbjct: 221 GRLTDLSNDGVISLASVTYVVLDEADRMLDMGFEVAIRRILFEIRPDRLVALTSATWPEG 280
Query: 437 VKKLAEDYLGDYIQINIGSLQLS---AITTFFK 526
V+KL + Y + + GSL L+ ++T FF+
Sbjct: 281 VRKLTDKYTKEAVMAVNGSLDLTSCKSVTQFFE 313
Score = 75.4 bits (177), Expect = 4e-14
Identities = 41/90 (45%), Positives = 56/90 (62%), Gaps = 6/90 (6%)
Frame = +3
Query: 3 GSGKTLAYILPAIVHINNQ-PPIRRGD-----GPIALVLAPTRELAQQIQQVAADFGHTS 164
GSGKTLA++LPA++HI+ Q + D P LVL+PTRELAQQI+ + +
Sbjct: 131 GSGKTLAFLLPALLHIDAQLAQYEKNDEEQKPSPFVLVLSPTRELAQQIEGEVKKYSYNG 190
Query: 165 YVRNTCVFGGAPKREQARDLERGVEIVIAT 254
Y ++ C++GG + EQ GVEIVIAT
Sbjct: 191 Y-KSVCLYGGGSRPEQVEACRGGVEIVIAT 219
>AC024859-14|AAY43989.1| 643|Caenorhabditis elegans Hypothetical
protein Y71H2AM.19 protein.
Length = 643
Score = 90.6 bits (215), Expect = 9e-19
Identities = 44/83 (53%), Positives = 63/83 (75%), Gaps = 5/83 (6%)
Frame = +2
Query: 257 GRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIE----QIRPDRQTLMWSAT 424
GRLID +++G ++ C YLVLDEADRMLDMGFEPQIR+I+E + +R T M+SAT
Sbjct: 310 GRLIDVMDQGLIGMEGCRYLVLDEADRMLDMGFEPQIRQIVECNRMPSKEERITAMFSAT 369
Query: 425 WPKEVKKLAEDYLGD-YIQINIG 490
+PKE++ LA+D+L + Y+ + +G
Sbjct: 370 FPKEIQLLAQDFLKENYVFLAVG 392
Score = 46.4 bits (105), Expect = 2e-05
Identities = 32/96 (33%), Positives = 49/96 (51%), Gaps = 12/96 (12%)
Frame = +3
Query: 3 GSGKTLAYILPAIVHINNQPPI-----------RRGDGPIALVLAPTRELAQQIQQVAAD 149
GSGKT A+++P + I P R+ P ALVL+PTREL+ QI +
Sbjct: 213 GSGKTAAFLVPLVNAILQDGPDAVHRSVTSSGGRKKQYPSALVLSPTRELSLQIFNESRK 272
Query: 150 FGHTSYVRNTCVFGGAPK-REQARDLERGVEIVIAT 254
F + + + + ++GG ++Q L G I+IAT
Sbjct: 273 FAYRTPITSALLYGGRENYKDQIHKLRLGCHILIAT 308
Score = 29.5 bits (63), Expect = 2.3
Identities = 18/45 (40%), Positives = 26/45 (57%)
Frame = +1
Query: 508 NHNILQIVDICQEHEKENKLNVLLQEIGQSQEPGAKTIIFVETKR 642
+ NI+Q + +E EK + L LL G S + T++FVETKR
Sbjct: 398 SENIMQKIVWVEEDEKRSYLMDLLDATGDS----SLTLVFVETKR 438
>AC006665-5|AAF39907.1| 630|Caenorhabditis elegans Hypothetical
protein H27M09.1 protein.
Length = 630
Score = 82.6 bits (195), Expect = 2e-16
Identities = 41/91 (45%), Positives = 58/91 (63%)
Frame = +2
Query: 257 GRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSATWPKE 436
GRL D L K NL+ C YLVLDEADRMLDMGFE +I+ I + RQTL++SAT P++
Sbjct: 331 GRLSDMLTKKIINLEVCRYLVLDEADRMLDMGFEDEIKSIFYFFKAQRQTLLFSATMPRK 390
Query: 437 VKKLAEDYLGDYIQINIGSLQLSAITTFFKL 529
++ A+ L I +N+G +++ +L
Sbjct: 391 IQFFAKSALVKPIVVNVGRAGAASLNVLQEL 421
Score = 60.1 bits (139), Expect = 1e-09
Identities = 34/93 (36%), Positives = 51/93 (54%), Gaps = 9/93 (9%)
Frame = +3
Query: 3 GSGKTLAYILPAIVHINNQP---PIRRGDGPIALVLAPTRELAQQIQQVAAD----FGHT 161
GSGKT+ ++LP ++ Q P R +GP L++ P+RELA+QI + + G
Sbjct: 237 GSGKTMTFVLPLVMFCLEQEMKLPFMRSEGPFGLIIVPSRELARQIFDLIIEMFDALGKA 296
Query: 162 SY--VRNTCVFGGAPKREQARDLERGVEIVIAT 254
+R GG P EQA+D+ G+ IV+AT
Sbjct: 297 GLPEMRAGLCIGGVPIGEQAKDVRDGIHIVVAT 329
>U13070-1|AAK67224.1| 730|Caenorhabditis elegans Hypothetical
protein F01F1.7 protein.
Length = 730
Score = 80.2 bits (189), Expect = 1e-15
Identities = 40/88 (45%), Positives = 56/88 (63%), Gaps = 4/88 (4%)
Frame = +3
Query: 3 GSGKTLAYILPAIVHINNQPPIRRGD----GPIALVLAPTRELAQQIQQVAADFGHTSYV 170
GSGKT A++LP +V I + P + R + GP A+++APTRELAQQI++ FG +
Sbjct: 348 GSGKTAAFLLPLLVWITSLPKMERQEHRDLGPYAIIMAPTRELAQQIEEETNKFGKLLGI 407
Query: 171 RNTCVFGGAPKREQARDLERGVEIVIAT 254
+ V GGA + +Q L GVE+VIAT
Sbjct: 408 KTVSVIGGASREDQGMKLRMGVEVVIAT 435
Score = 64.1 bits (149), Expect = 9e-11
Identities = 41/105 (39%), Positives = 58/105 (55%), Gaps = 26/105 (24%)
Frame = +2
Query: 257 GRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPD------------- 397
GRL+D LE L +CTY++LDEADRMLDMGFEP ++K++E + PD
Sbjct: 437 GRLLDVLENRYLLLNQCTYVILDEADRMLDMGFEPDVQKVLEYM-PDTNMKKDTDEFDNE 495
Query: 398 -------------RQTLMWSATWPKEVKKLAEDYLGDYIQINIGS 493
RQT+M++AT +++LA YL ++IGS
Sbjct: 496 EALMKGFSTREKYRQTVMFTATMSSAIERLARQYLRRPAVVHIGS 540
>AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA
helicase-3 protein.
Length = 720
Score = 68.5 bits (160), Expect = 4e-12
Identities = 40/86 (46%), Positives = 51/86 (59%), Gaps = 6/86 (6%)
Frame = +2
Query: 257 GRLIDFLEKGTTNLQRCTYLVLDEADRMLD-MGFEPQIRKIIE----QIRPDRQTLMWSA 421
GR+ F E G L +C YLVLDEADRM+D MGF P+I +II RQT+M+SA
Sbjct: 434 GRVKHFCEDGAIKLDKCRYLVLDEADRMIDSMGFGPEIEQIINYKNMPKNDKRQTMMFSA 493
Query: 422 TWPKEVKKLAEDYL-GDYIQINIGSL 496
T+P V++ A L DY I I +
Sbjct: 494 TFPSSVQEAARKLLREDYTMITIDKI 519
Score = 47.2 bits (107), Expect = 1e-05
Identities = 28/88 (31%), Positives = 44/88 (50%), Gaps = 4/88 (4%)
Frame = +3
Query: 3 GSGKTLAYILPAIVHINNQPPIRRG-DG---PIALVLAPTRELAQQIQQVAADFGHTSYV 170
GSGKT A++LP + + + + G +G P ++L PTRELA QI F + S +
Sbjct: 345 GSGKTAAFLLPIMSRLILEKDLNYGAEGGCYPRCIILTPTRELADQIYNEGRKFSYQSVM 404
Query: 171 RNTCVFGGAPKREQARDLERGVEIVIAT 254
V+GG + +G I++ T
Sbjct: 405 EIKPVYGGINVGYNKSQIMKGCTIIVGT 432
>AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line
helicase protein 3 protein.
Length = 720
Score = 68.5 bits (160), Expect = 4e-12
Identities = 40/86 (46%), Positives = 51/86 (59%), Gaps = 6/86 (6%)
Frame = +2
Query: 257 GRLIDFLEKGTTNLQRCTYLVLDEADRMLD-MGFEPQIRKIIE----QIRPDRQTLMWSA 421
GR+ F E G L +C YLVLDEADRM+D MGF P+I +II RQT+M+SA
Sbjct: 434 GRVKHFCEDGAIKLDKCRYLVLDEADRMIDSMGFGPEIEQIINYKNMPKNDKRQTMMFSA 493
Query: 422 TWPKEVKKLAEDYL-GDYIQINIGSL 496
T+P V++ A L DY I I +
Sbjct: 494 TFPSSVQEAARKLLREDYTMITIDKI 519
Score = 47.2 bits (107), Expect = 1e-05
Identities = 28/88 (31%), Positives = 44/88 (50%), Gaps = 4/88 (4%)
Frame = +3
Query: 3 GSGKTLAYILPAIVHINNQPPIRRG-DG---PIALVLAPTRELAQQIQQVAADFGHTSYV 170
GSGKT A++LP + + + + G +G P ++L PTRELA QI F + S +
Sbjct: 345 GSGKTAAFLLPIMSRLILEKDLNYGAEGGCYPRCIILTPTRELADQIYNEGRKFSYQSVM 404
Query: 171 RNTCVFGGAPKREQARDLERGVEIVIAT 254
V+GG + +G I++ T
Sbjct: 405 EIKPVYGGINVGYNKSQIMKGCTIIVGT 432
>U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 65.7 bits (153), Expect = 3e-11
Identities = 37/86 (43%), Positives = 53/86 (61%), Gaps = 6/86 (6%)
Frame = +2
Query: 257 GRLIDFLEKGTTNLQRCTYLVLDEADRMLD-MGFEPQIRKIIE----QIRPDRQTLMWSA 421
GR+ F E+GT L +C + VLDEADRM+D MGF I I+ + +RQTLM+SA
Sbjct: 477 GRIKHFCEEGTIKLDKCRFFVLDEADRMIDAMGFGTDIETIVNYDSMPRKENRQTLMFSA 536
Query: 422 TWPKEVKKLAEDYLGD-YIQINIGSL 496
T+P V++ A +L + Y+ I I +
Sbjct: 537 TFPDSVQEAARAFLRENYVMIAIDKI 562
Score = 50.4 bits (115), Expect = 1e-06
Identities = 28/88 (31%), Positives = 45/88 (51%), Gaps = 4/88 (4%)
Frame = +3
Query: 3 GSGKTLAYILPAIVHINNQPPIRR-GDG---PIALVLAPTRELAQQIQQVAADFGHTSYV 170
GSGKT A++LP + + + + G+G P ++L PTRELA QI F + + +
Sbjct: 388 GSGKTAAFLLPIMTRLIDDNNLNTAGEGGCYPRCIILTPTRELADQIYNEGRKFAYQTMM 447
Query: 171 RNTCVFGGAPKREQARDLERGVEIVIAT 254
V+GG +E+G I++ T
Sbjct: 448 EIKPVYGGLAVGYNKGQIEKGATIIVGT 475
>U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein.
Length = 974
Score = 65.7 bits (153), Expect = 3e-11
Identities = 38/86 (44%), Positives = 56/86 (65%), Gaps = 6/86 (6%)
Frame = +2
Query: 257 GRLIDFLEKGTTNLQRCTYLVLDEADRMLD-MGFEPQIRKII--EQI--RPDRQTLMWSA 421
GR+ F E+GT L +C + VLDEADRM+D MGF I I+ E + + +RQTLM+SA
Sbjct: 688 GRIKHFCEEGTIKLDKCRFFVLDEADRMIDAMGFGTDIDTIVNYESMPKKENRQTLMFSA 747
Query: 422 TWPKEVKKLAEDYLGD-YIQINIGSL 496
T+P V++ A ++L + YI + I +
Sbjct: 748 TFPDSVQEAARNHLKEGYIMLAIDKI 773
Score = 50.0 bits (114), Expect = 2e-06
Identities = 27/88 (30%), Positives = 45/88 (51%), Gaps = 4/88 (4%)
Frame = +3
Query: 3 GSGKTLAYILPAIVHINNQPPIRR-GDG---PIALVLAPTRELAQQIQQVAADFGHTSYV 170
GSGKT A++LP + + ++ + G+G P ++L PTREL QI F + + +
Sbjct: 599 GSGKTAAFLLPIMARLIDENDLNTAGEGGCYPRCIILTPTRELTDQIYNEGRKFAYQTMM 658
Query: 171 RNTCVFGGAPKREQARDLERGVEIVIAT 254
V+GG +E+G I++ T
Sbjct: 659 EIRPVYGGLAVGYNKGQIEKGATIIVGT 686
>U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GLH-2
protein.
Length = 974
Score = 65.7 bits (153), Expect = 3e-11
Identities = 38/86 (44%), Positives = 56/86 (65%), Gaps = 6/86 (6%)
Frame = +2
Query: 257 GRLIDFLEKGTTNLQRCTYLVLDEADRMLD-MGFEPQIRKII--EQI--RPDRQTLMWSA 421
GR+ F E+GT L +C + VLDEADRM+D MGF I I+ E + + +RQTLM+SA
Sbjct: 688 GRIKHFCEEGTIKLDKCRFFVLDEADRMIDAMGFGTDIDTIVNYESMPKKENRQTLMFSA 747
Query: 422 TWPKEVKKLAEDYLGD-YIQINIGSL 496
T+P V++ A ++L + YI + I +
Sbjct: 748 TFPDSVQEAARNHLKEGYIMLAIDKI 773
Score = 50.0 bits (114), Expect = 2e-06
Identities = 27/88 (30%), Positives = 45/88 (51%), Gaps = 4/88 (4%)
Frame = +3
Query: 3 GSGKTLAYILPAIVHINNQPPIRR-GDG---PIALVLAPTRELAQQIQQVAADFGHTSYV 170
GSGKT A++LP + + ++ + G+G P ++L PTREL QI F + + +
Sbjct: 599 GSGKTAAFLLPIMARLIDENDLNTAGEGGCYPRCIILTPTRELTDQIYNEGRKFAYQTMM 658
Query: 171 RNTCVFGGAPKREQARDLERGVEIVIAT 254
V+GG +E+G I++ T
Sbjct: 659 EIRPVYGGLAVGYNKGQIEKGATIIVGT 686
>L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 65.7 bits (153), Expect = 3e-11
Identities = 37/86 (43%), Positives = 53/86 (61%), Gaps = 6/86 (6%)
Frame = +2
Query: 257 GRLIDFLEKGTTNLQRCTYLVLDEADRMLD-MGFEPQIRKIIE----QIRPDRQTLMWSA 421
GR+ F E+GT L +C + VLDEADRM+D MGF I I+ + +RQTLM+SA
Sbjct: 477 GRIKHFCEEGTIKLDKCRFFVLDEADRMIDAMGFGTDIETIVNYDSMPRKENRQTLMFSA 536
Query: 422 TWPKEVKKLAEDYLGD-YIQINIGSL 496
T+P V++ A +L + Y+ I I +
Sbjct: 537 TFPDSVQEAARAFLRENYVMIAIDKI 562
Score = 50.4 bits (115), Expect = 1e-06
Identities = 28/88 (31%), Positives = 45/88 (51%), Gaps = 4/88 (4%)
Frame = +3
Query: 3 GSGKTLAYILPAIVHINNQPPIRR-GDG---PIALVLAPTRELAQQIQQVAADFGHTSYV 170
GSGKT A++LP + + + + G+G P ++L PTRELA QI F + + +
Sbjct: 388 GSGKTAAFLLPIMTRLIDDNNLNTAGEGGCYPRCIILTPTRELADQIYNEGRKFAYQTMM 447
Query: 171 RNTCVFGGAPKREQARDLERGVEIVIAT 254
V+GG +E+G I++ T
Sbjct: 448 EIKPVYGGLAVGYNKGQIEKGATIIVGT 475
>AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line
helicase protein 1 protein.
Length = 763
Score = 65.7 bits (153), Expect = 3e-11
Identities = 37/86 (43%), Positives = 53/86 (61%), Gaps = 6/86 (6%)
Frame = +2
Query: 257 GRLIDFLEKGTTNLQRCTYLVLDEADRMLD-MGFEPQIRKIIE----QIRPDRQTLMWSA 421
GR+ F E+GT L +C + VLDEADRM+D MGF I I+ + +RQTLM+SA
Sbjct: 477 GRIKHFCEEGTIKLDKCRFFVLDEADRMIDAMGFGTDIETIVNYDSMPRKENRQTLMFSA 536
Query: 422 TWPKEVKKLAEDYLGD-YIQINIGSL 496
T+P V++ A +L + Y+ I I +
Sbjct: 537 TFPDSVQEAARAFLRENYVMIAIDKI 562
Score = 50.4 bits (115), Expect = 1e-06
Identities = 28/88 (31%), Positives = 45/88 (51%), Gaps = 4/88 (4%)
Frame = +3
Query: 3 GSGKTLAYILPAIVHINNQPPIRR-GDG---PIALVLAPTRELAQQIQQVAADFGHTSYV 170
GSGKT A++LP + + + + G+G P ++L PTRELA QI F + + +
Sbjct: 388 GSGKTAAFLLPIMTRLIDDNNLNTAGEGGCYPRCIILTPTRELADQIYNEGRKFAYQTMM 447
Query: 171 RNTCVFGGAPKREQARDLERGVEIVIAT 254
V+GG +E+G I++ T
Sbjct: 448 EIKPVYGGLAVGYNKGQIEKGATIIVGT 475
>AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line
helicase protein 2 protein.
Length = 974
Score = 65.7 bits (153), Expect = 3e-11
Identities = 38/86 (44%), Positives = 56/86 (65%), Gaps = 6/86 (6%)
Frame = +2
Query: 257 GRLIDFLEKGTTNLQRCTYLVLDEADRMLD-MGFEPQIRKII--EQI--RPDRQTLMWSA 421
GR+ F E+GT L +C + VLDEADRM+D MGF I I+ E + + +RQTLM+SA
Sbjct: 688 GRIKHFCEEGTIKLDKCRFFVLDEADRMIDAMGFGTDIDTIVNYESMPKKENRQTLMFSA 747
Query: 422 TWPKEVKKLAEDYLGD-YIQINIGSL 496
T+P V++ A ++L + YI + I +
Sbjct: 748 TFPDSVQEAARNHLKEGYIMLAIDKI 773
Score = 50.0 bits (114), Expect = 2e-06
Identities = 27/88 (30%), Positives = 45/88 (51%), Gaps = 4/88 (4%)
Frame = +3
Query: 3 GSGKTLAYILPAIVHINNQPPIRR-GDG---PIALVLAPTRELAQQIQQVAADFGHTSYV 170
GSGKT A++LP + + ++ + G+G P ++L PTREL QI F + + +
Sbjct: 599 GSGKTAAFLLPIMARLIDENDLNTAGEGGCYPRCIILTPTRELTDQIYNEGRKFAYQTMM 658
Query: 171 RNTCVFGGAPKREQARDLERGVEIVIAT 254
V+GG +E+G I++ T
Sbjct: 659 EIRPVYGGLAVGYNKGQIEKGATIIVGT 686
>AC006605-1|AAK85443.1| 430|Caenorhabditis elegans Conserved
germline helicase protein1 protein.
Length = 430
Score = 65.7 bits (153), Expect = 3e-11
Identities = 29/90 (32%), Positives = 54/90 (60%), Gaps = 1/90 (1%)
Frame = +2
Query: 257 GRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSATWPKE 436
GR++D +EKG ++ C LVLDEAD++L F+ + ++I + +RQ +++SAT+P
Sbjct: 170 GRILDLMEKGVAKMEHCKTLVLDEADKLLSQDFQGILDRLINFLPKERQVMLYSATFPNT 229
Query: 437 VKKLAEDYLGDYIQINI-GSLQLSAITTFF 523
V + ++ +IN+ L L +T ++
Sbjct: 230 VTSFMQKHMHKPYEINLMEELTLLGVTQYY 259
Score = 46.0 bits (104), Expect = 3e-05
Identities = 30/84 (35%), Positives = 42/84 (50%)
Frame = +3
Query: 3 GSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNTC 182
G+GKT AY +P I I QP ++ A+V+ PTRELA Q Q+ + ++
Sbjct: 90 GTGKTGAYCIPVIEKI--QPALKAIQ---AMVIVPTRELALQTSQICVELSKHIQLKVMV 144
Query: 183 VFGGAPKREQARDLERGVEIVIAT 254
GG R+ L V +VIAT
Sbjct: 145 TTGGTDLRDDIMRLNGTVHLVIAT 168
>Z29115-1|CAA82362.1| 489|Caenorhabditis elegans Hypothetical
protein T26G10.1 protein.
Length = 489
Score = 64.5 bits (150), Expect = 7e-11
Identities = 35/81 (43%), Positives = 55/81 (67%), Gaps = 2/81 (2%)
Frame = +2
Query: 257 GRLIDFLE--KGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSATWP 430
GRL+D LE KG NL+ +L++DEADR+L+M FE ++ KI++ I +R+T ++SAT
Sbjct: 171 GRLVDHLENTKGF-NLKALKFLIMDEADRILNMDFEVELDKILKVIPRERRTYLFSATMT 229
Query: 431 KEVKKLAEDYLGDYIQINIGS 493
K+V KL L D ++++ S
Sbjct: 230 KKVSKLERASLRDPARVSVSS 250
Score = 42.7 bits (96), Expect = 2e-04
Identities = 30/84 (35%), Positives = 39/84 (46%)
Frame = +3
Query: 3 GSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNTC 182
GSGKT A+ +P + + + P LVL PTRELA QI Q G +
Sbjct: 91 GSGKTGAFAIPVLQSLLDHP-----QAFFCLVLTPTRELAFQIGQQFEALGSGIGLIAAV 145
Query: 183 VFGGAPKREQARDLERGVEIVIAT 254
+ GG QA L R I++AT
Sbjct: 146 IVGGVDMAAQAMALARRPHIIVAT 169
>AC024753-1|AAF60456.1| 732|Caenorhabditis elegans Hypothetical
protein Y23H5B.6 protein.
Length = 732
Score = 63.3 bits (147), Expect = 2e-10
Identities = 33/81 (40%), Positives = 46/81 (56%), Gaps = 1/81 (1%)
Frame = +2
Query: 248 CYSGRLIDFL-EKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSAT 424
C GRL+ + E + LVLDEADRMLDMGF Q+ II + +RQTL++SAT
Sbjct: 203 CTPGRLLQHMDENAQMSCDSLQVLVLDEADRMLDMGFSKQLNSIINNLPAERQTLLFSAT 262
Query: 425 WPKEVKKLAEDYLGDYIQINI 487
+ VK L D + +++
Sbjct: 263 QTRNVKDLCRVCTNDPVFVSV 283
Score = 32.3 bits (70), Expect = 0.33
Identities = 26/84 (30%), Positives = 40/84 (47%)
Frame = +3
Query: 3 GSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNTC 182
GSGKTLA ++P ++ + G AL+++PTRELA Q G
Sbjct: 123 GSGKTLALVIP-VLEALWRAKWSPDYGLGALIISPTRELALQTFSTINAVGAHHGFSCGL 181
Query: 183 VFGGAPKREQARDLERGVEIVIAT 254
V GG+ + R+ G+ I++ T
Sbjct: 182 VIGGSDVAFE-RNRISGINIIVCT 204
>U13876-12|AAA21169.1| 363|Caenorhabditis elegans Hypothetical
protein F57B9.3 protein.
Length = 363
Score = 58.8 bits (136), Expect = 3e-09
Identities = 35/101 (34%), Positives = 50/101 (49%), Gaps = 2/101 (1%)
Frame = +2
Query: 227 EGSRNSHCYSGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQT 406
E + SH G DFL ++ R VLDEAD ML GF+ QI ++ + D Q
Sbjct: 105 ENDKISHVLMGTPKDFLSNIPSDTSRIKMFVLDEADEMLSKGFKDQIYEVFRSMPQDVQV 164
Query: 407 LMWSATWPKEVKKLAEDYLGDYIQINI--GSLQLSAITTFF 523
++ SAT P EV + ++ D I+I + L L I F+
Sbjct: 165 VLLSATMPSEVLDVTNRFMRDPIRILVKKDELTLEGIRQFY 205
>AF039720-12|AAB96704.1| 399|Caenorhabditis elegans Hypothetical
protein F33D11.10 protein.
Length = 399
Score = 57.6 bits (133), Expect = 8e-09
Identities = 31/91 (34%), Positives = 48/91 (52%), Gaps = 2/91 (2%)
Frame = +2
Query: 257 GRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSATWPKE 436
GR+ D + + + LVLDEAD ML+ GF+ Q+ I + P Q ++ SAT P E
Sbjct: 153 GRVFDMIRRRNLRTRAIKLLVLDEADEMLNKGFKEQLYDIYRYLPPGAQVVLLSATLPHE 212
Query: 437 VKKLAEDYLGDYIQINI--GSLQLSAITTFF 523
+ ++ ++ D I+I + L L I FF
Sbjct: 213 ILEMTSKFMTDPIRILVKRDELTLEGIKQFF 243
Score = 44.4 bits (100), Expect = 8e-05
Identities = 29/84 (34%), Positives = 42/84 (50%)
Frame = +3
Query: 3 GSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNTC 182
G+GKT + + + ++ Q +R AL+L+PTRELA QIQ+V G V+
Sbjct: 73 GTGKTATFSISVLQSLDTQ--VRETQ---ALILSPTRELAVQIQKVVLALGDYMNVQCHA 127
Query: 183 VFGGAPKREQARDLERGVEIVIAT 254
GG E R L+ G +V T
Sbjct: 128 CIGGTNLGEDIRKLDYGQHVVSGT 151
>AC024844-2|AAK29954.2| 399|Caenorhabditis elegans Hypothetical
protein Y65B4A.6 protein.
Length = 399
Score = 57.6 bits (133), Expect = 8e-09
Identities = 31/91 (34%), Positives = 48/91 (52%), Gaps = 2/91 (2%)
Frame = +2
Query: 257 GRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSATWPKE 436
GR+ D + + + LVLDEAD ML+ GF+ Q+ I + P Q ++ SAT P E
Sbjct: 153 GRVFDMIRRRNLRTRAIKLLVLDEADEMLNKGFKEQLYDIYRYLPPGAQVVLLSATLPHE 212
Query: 437 VKKLAEDYLGDYIQINI--GSLQLSAITTFF 523
+ ++ ++ D I+I + L L I FF
Sbjct: 213 ILEMTSKFMTDPIRILVKRDELTLEGIKQFF 243
Score = 44.4 bits (100), Expect = 8e-05
Identities = 29/84 (34%), Positives = 42/84 (50%)
Frame = +3
Query: 3 GSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNTC 182
G+GKT + + + ++ Q +R AL+L+PTRELA QIQ+V G V+
Sbjct: 73 GTGKTATFSISVLQSLDTQ--VRETQ---ALILSPTRELAVQIQKVVLALGDYMNVQCHA 127
Query: 183 VFGGAPKREQARDLERGVEIVIAT 254
GG E R L+ G +V T
Sbjct: 128 CIGGTNLGEDIRKLDYGQHVVSGT 151
>AC024876-4|AAU05555.1| 825|Caenorhabditis elegans Hypothetical
protein Y94H6A.5a protein.
Length = 825
Score = 57.2 bits (132), Expect = 1e-08
Identities = 28/77 (36%), Positives = 47/77 (61%)
Frame = +2
Query: 257 GRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSATWPKE 436
GRL+ + + L Y+V DEADR+ +MGF+ Q+ + +++I RQTL++SAT PK
Sbjct: 152 GRLLHVIVEMDLRLSYVQYVVFDEADRLFEMGFQDQLTETLKRIPESRQTLLFSATLPKM 211
Query: 437 VKKLAEDYLGDYIQINI 487
+ A+ L D + + +
Sbjct: 212 LVDFAKAGLTDPMLVRL 228
Score = 51.2 bits (117), Expect = 7e-07
Identities = 29/84 (34%), Positives = 46/84 (54%)
Frame = +3
Query: 3 GSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNTC 182
GSGKT A+++P + + R G AL+++PTRELA Q +V + G + +R C
Sbjct: 71 GSGKTAAFVIPMLQKLKR----RDTTGIRALMVSPTRELALQTFKVVKELGRFTGLRCAC 126
Query: 183 VFGGAPKREQARDLERGVEIVIAT 254
+ GG EQ + +I++AT
Sbjct: 127 LVGGDQIEEQFSTIHENPDILLAT 150
>AC024876-3|AAU05556.1| 871|Caenorhabditis elegans Hypothetical
protein Y94H6A.5b protein.
Length = 871
Score = 57.2 bits (132), Expect = 1e-08
Identities = 28/77 (36%), Positives = 47/77 (61%)
Frame = +2
Query: 257 GRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSATWPKE 436
GRL+ + + L Y+V DEADR+ +MGF+ Q+ + +++I RQTL++SAT PK
Sbjct: 152 GRLLHVIVEMDLRLSYVQYVVFDEADRLFEMGFQDQLTETLKRIPESRQTLLFSATLPKM 211
Query: 437 VKKLAEDYLGDYIQINI 487
+ A+ L D + + +
Sbjct: 212 LVDFAKAGLTDPMLVRL 228
Score = 51.2 bits (117), Expect = 7e-07
Identities = 29/84 (34%), Positives = 46/84 (54%)
Frame = +3
Query: 3 GSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNTC 182
GSGKT A+++P + + R G AL+++PTRELA Q +V + G + +R C
Sbjct: 71 GSGKTAAFVIPMLQKLKR----RDTTGIRALMVSPTRELALQTFKVVKELGRFTGLRCAC 126
Query: 183 VFGGAPKREQARDLERGVEIVIAT 254
+ GG EQ + +I++AT
Sbjct: 127 LVGGDQIEEQFSTIHENPDILLAT 150
>Z12116-1|CAA78102.1| 402|Caenorhabditis elegans protein (
C.elegans mRNA for eIF-4A homologue. ).
Length = 402
Score = 56.0 bits (129), Expect = 2e-08
Identities = 32/84 (38%), Positives = 47/84 (55%)
Frame = +3
Query: 3 GSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNTC 182
G+GKT + + + I+++ P + ALV+APTRELAQQIQ+V + G V
Sbjct: 76 GTGKTATFSVSILQRIDHEDPHVQ-----ALVMAPTRELAQQIQKVMSALGEYLNVNILP 130
Query: 183 VFGGAPKREQARDLERGVEIVIAT 254
GG R+ R LE G+ +V+ T
Sbjct: 131 CIGGTSVRDDQRKLEAGIHVVVGT 154
Score = 54.0 bits (124), Expect = 9e-08
Identities = 30/91 (32%), Positives = 47/91 (51%), Gaps = 2/91 (2%)
Frame = +2
Query: 257 GRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSATWPKE 436
GR+ D + + + R VLDEAD ML GF+ QI ++ + D Q ++ SAT P E
Sbjct: 156 GRVGDMINRNALDTSRIKMFVLDEADEMLSRGFKDQIYEVFRSMPQDVQVVLLSATMPSE 215
Query: 437 VKKLAEDYLGDYIQINI--GSLQLSAITTFF 523
V + ++ + I+I + L L I F+
Sbjct: 216 VLDVTNRFMRNPIRILVKKDELTLEGIRQFY 246
>U13876-3|AAA21170.1| 402|Caenorhabditis elegans Initiation factor
protein 1, isoforma protein.
Length = 402
Score = 56.0 bits (129), Expect = 2e-08
Identities = 32/84 (38%), Positives = 47/84 (55%)
Frame = +3
Query: 3 GSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNTC 182
G+GKT + + + I+++ P + ALV+APTRELAQQIQ+V + G V
Sbjct: 76 GTGKTATFSVSILQRIDHEDPHVQ-----ALVMAPTRELAQQIQKVMSALGEYLNVNILP 130
Query: 183 VFGGAPKREQARDLERGVEIVIAT 254
GG R+ R LE G+ +V+ T
Sbjct: 131 CIGGTSVRDDQRKLEAGIHVVVGT 154
Score = 54.0 bits (124), Expect = 9e-08
Identities = 30/91 (32%), Positives = 47/91 (51%), Gaps = 2/91 (2%)
Frame = +2
Query: 257 GRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSATWPKE 436
GR+ D + + + R VLDEAD ML GF+ QI ++ + D Q ++ SAT P E
Sbjct: 156 GRVGDMINRNALDTSRIKMFVLDEADEMLSRGFKDQIYEVFRSMPQDVQVVLLSATMPSE 215
Query: 437 VKKLAEDYLGDYIQINI--GSLQLSAITTFF 523
V + ++ + I+I + L L I F+
Sbjct: 216 VLDVTNRFMRNPIRILVKKDELTLEGIRQFY 246
>EU051652-1|ABS85191.1| 973|Caenorhabditis elegans MEL-46 protein.
Length = 973
Score = 55.2 bits (127), Expect = 4e-08
Identities = 28/90 (31%), Positives = 47/90 (52%), Gaps = 2/90 (2%)
Frame = +2
Query: 257 GRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSATWPKE 436
GR+ ++ G N+ + VLDEAD+++D F I II + RQ ++SAT+P+
Sbjct: 149 GRIAQLVKLGAMNMSHVDFFVLDEADKLMDEVFRDDINIIINSLPQIRQVAVFSATYPRN 208
Query: 437 VKKLAEDYLGD--YIQINIGSLQLSAITTF 520
+ L +L D ++ N +QL I +
Sbjct: 209 LDNLLSTFLRDAALVRFNADDVQLFGIKQY 238
Score = 31.1 bits (67), Expect = 0.76
Identities = 23/85 (27%), Positives = 44/85 (51%), Gaps = 1/85 (1%)
Frame = +3
Query: 3 GSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNTC 182
G+GKTL + + A+ ++++ R +++ PTRE++ QI++ T R +
Sbjct: 69 GTGKTLVFSVLAVENLDS-----RSSHIQKVIVTPTREISVQIKETVRKVAPTG-ARTSV 122
Query: 183 VFGGAPKREQARDLER-GVEIVIAT 254
GG+ + DL++ +IVI T
Sbjct: 123 YVGGSAHKLNLIDLKQTRPQIVIGT 147
>CU457744-1|CAM36366.2| 973|Caenorhabditis elegans Hypothetical
protein T06A10.1 protein.
Length = 973
Score = 55.2 bits (127), Expect = 4e-08
Identities = 28/90 (31%), Positives = 47/90 (52%), Gaps = 2/90 (2%)
Frame = +2
Query: 257 GRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSATWPKE 436
GR+ ++ G N+ + VLDEAD+++D F I II + RQ ++SAT+P+
Sbjct: 149 GRIAQLVKLGAMNMSHVDFFVLDEADKLMDEVFRDDINIIINSLPQIRQVAVFSATYPRN 208
Query: 437 VKKLAEDYLGD--YIQINIGSLQLSAITTF 520
+ L +L D ++ N +QL I +
Sbjct: 209 LDNLLSTFLRDAALVRFNADDVQLFGIKQY 238
Score = 31.1 bits (67), Expect = 0.76
Identities = 23/85 (27%), Positives = 44/85 (51%), Gaps = 1/85 (1%)
Frame = +3
Query: 3 GSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNTC 182
G+GKTL + + A+ ++++ R +++ PTRE++ QI++ T R +
Sbjct: 69 GTGKTLVFSVLAVENLDS-----RSSHIQKVIVTPTREISVQIKETVRKVAPTG-ARTSV 122
Query: 183 VFGGAPKREQARDLER-GVEIVIAT 254
GG+ + DL++ +IVI T
Sbjct: 123 YVGGSAHKLNLIDLKQTRPQIVIGT 147
>AF067608-1|AAC17654.2| 544|Caenorhabditis elegans Hypothetical
protein B0511.6 protein.
Length = 544
Score = 52.4 bits (120), Expect = 3e-07
Identities = 29/84 (34%), Positives = 51/84 (60%)
Frame = +3
Query: 3 GSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNTC 182
GSGKTLA++LPAI + ++ ++ +G ++++PTREL+ Q V ++ S +
Sbjct: 115 GSGKTLAFLLPAI-ELLHKLNWKQHNGTGVIIVSPTRELSMQTYGVLSELLEGSNLTYGL 173
Query: 183 VFGGAPKREQARDLERGVEIVIAT 254
V GG+ + + L +GV I++AT
Sbjct: 174 VMGGSNRSAEKDKLAKGVSILVAT 197
Score = 52.0 bits (119), Expect = 4e-07
Identities = 25/67 (37%), Positives = 45/67 (67%), Gaps = 1/67 (1%)
Frame = +2
Query: 257 GRLIDFLEKGTTNLQR-CTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSATWPK 433
GRL+D L+ L R L++DEADR+LD+GFE ++++++ + RQ++++SAT
Sbjct: 199 GRLLDHLQNTDNFLVRNMKCLIIDEADRILDIGFEIEMQQVLRHLPKQRQSMLFSATHSP 258
Query: 434 EVKKLAE 454
+V +L +
Sbjct: 259 KVDELVK 265
>Z54327-6|CAA91120.1| 425|Caenorhabditis elegans Hypothetical
protein C26D10.2a protein.
Length = 425
Score = 52.0 bits (119), Expect = 4e-07
Identities = 22/78 (28%), Positives = 45/78 (57%), Gaps = 1/78 (1%)
Frame = +2
Query: 257 GRLIDFLEKGTTNLQRCTYLVLDEADRML-DMGFEPQIRKIIEQIRPDRQTLMWSATWPK 433
GR++ G L + Y VLDE D+M+ D +++I++ +Q +M+SAT PK
Sbjct: 170 GRMLALARSGKLKLDKVKYFVLDECDKMIGDADMRRDVQEIVKMTPQQKQVMMFSATLPK 229
Query: 434 EVKKLAEDYLGDYIQINI 487
E++ + + ++ D +++ +
Sbjct: 230 ELRTVCKRFMQDPMEVYV 247
>Z81094-7|CAB03153.2| 960|Caenorhabditis elegans Hypothetical
protein F58G11.2 protein.
Length = 960
Score = 50.8 bits (116), Expect = 9e-07
Identities = 29/88 (32%), Positives = 46/88 (52%), Gaps = 5/88 (5%)
Frame = +3
Query: 6 SGKTLAYILPAIVHI-----NNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYV 170
+GKT A+ LP I I + R+ DGP+AL+LAPTRELA QI + + + +
Sbjct: 429 AGKTAAFGLPIIDKILRMDEETRNKARQDDGPLALILAPTRELAAQIHEALRTYCQNTDI 488
Query: 171 RNTCVFGGAPKREQARDLERGVEIVIAT 254
+G + + ++ G +I+I T
Sbjct: 489 IVLLSYGQSDRARSLNEIRNGCDILIGT 516
Score = 39.1 bits (87), Expect = 0.003
Identities = 28/77 (36%), Positives = 42/77 (54%), Gaps = 8/77 (10%)
Frame = +2
Query: 257 GRLIDFLEKGTTNLQRCTYLVLDEADRML-DMGFEP--QIRKIIE-----QIRPDRQTLM 412
GR++DF K +L +LV DEADR+L DM +P + II+ + RQT+M
Sbjct: 518 GRIMDFTVKSHISLLHLRFLVFDEADRLLQDMKKDPLGHLGAIIKDAGFMESAATRQTIM 577
Query: 413 WSATWPKEVKKLAEDYL 463
SAT+ V +A + +
Sbjct: 578 TSATFNASVMTVANELM 594
>Z54327-7|CAD57690.1| 268|Caenorhabditis elegans Hypothetical
protein C26D10.2b protein.
Length = 268
Score = 50.4 bits (115), Expect = 1e-06
Identities = 22/72 (30%), Positives = 41/72 (56%), Gaps = 1/72 (1%)
Frame = +2
Query: 257 GRLIDFLEKGTTNLQRCTYLVLDEADRML-DMGFEPQIRKIIEQIRPDRQTLMWSATWPK 433
GR++ G L + Y VLDE D+M+ D +++I++ +Q +M+SAT PK
Sbjct: 170 GRMLALARSGKLKLDKVKYFVLDECDKMIGDADMRRDVQEIVKMTPQQKQVMMFSATLPK 229
Query: 434 EVKKLAEDYLGD 469
E++ + + ++ D
Sbjct: 230 ELRTVCKRFMQD 241
>AC006661-5|AAF39890.2| 488|Caenorhabditis elegans Hypothetical
protein H20J04.4a protein.
Length = 488
Score = 50.4 bits (115), Expect = 1e-06
Identities = 30/84 (35%), Positives = 45/84 (53%)
Frame = +3
Query: 3 GSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNTC 182
G+GKTLA+ +P + ++ P G AL+L PTRELA QI + G ++ +
Sbjct: 136 GTGKTLAFAIPILQKLSVDPY-----GIYALILTPTRELAFQIAEQFTALGKPITLKCSV 190
Query: 183 VFGGAPKREQARDLERGVEIVIAT 254
+ GG QAR+L +V+AT
Sbjct: 191 IVGGRSLIHQARELSERPHVVVAT 214
Score = 47.2 bits (107), Expect = 1e-05
Identities = 26/68 (38%), Positives = 37/68 (54%), Gaps = 4/68 (5%)
Frame = +2
Query: 257 GRLIDFLEKGTTNL----QRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSAT 424
GRL D +E + ++ + VLDEADRML+ + Q++ I E I RQTL+ SAT
Sbjct: 216 GRLADLIESDPDTIAKVFKKIQFFVLDEADRMLEGQYNDQLKPIFESISEKRQTLLLSAT 275
Query: 425 WPKEVKKL 448
+ L
Sbjct: 276 ITNNINML 283
>AC006661-4|ABB88208.1| 561|Caenorhabditis elegans Hypothetical
protein H20J04.4b protein.
Length = 561
Score = 50.4 bits (115), Expect = 1e-06
Identities = 30/84 (35%), Positives = 45/84 (53%)
Frame = +3
Query: 3 GSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNTC 182
G+GKTLA+ +P + ++ P G AL+L PTRELA QI + G ++ +
Sbjct: 136 GTGKTLAFAIPILQKLSVDPY-----GIYALILTPTRELAFQIAEQFTALGKPITLKCSV 190
Query: 183 VFGGAPKREQARDLERGVEIVIAT 254
+ GG QAR+L +V+AT
Sbjct: 191 IVGGRSLIHQARELSERPHVVVAT 214
Score = 47.2 bits (107), Expect = 1e-05
Identities = 26/68 (38%), Positives = 37/68 (54%), Gaps = 4/68 (5%)
Frame = +2
Query: 257 GRLIDFLEKGTTNL----QRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSAT 424
GRL D +E + ++ + VLDEADRML+ + Q++ I E I RQTL+ SAT
Sbjct: 216 GRLADLIESDPDTIAKVFKKIQFFVLDEADRMLEGQYNDQLKPIFESISEKRQTLLLSAT 275
Query: 425 WPKEVKKL 448
+ L
Sbjct: 276 ITNNINML 283
>AC025726-23|AAK73934.1| 763|Caenorhabditis elegans Hypothetical
protein Y71G12B.8 protein.
Length = 763
Score = 49.6 bits (113), Expect = 2e-06
Identities = 26/58 (44%), Positives = 38/58 (65%)
Frame = +2
Query: 314 LVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAEDYLGDYIQINI 487
LVLDEADRML+ F Q+ ++I +RQTL++SAT +E+ +LA L ++I I
Sbjct: 322 LVLDEADRMLEEAFRDQMNELIRLCAQNRQTLLFSATMTEEIDELASMSLQKPVKIFI 379
Score = 44.0 bits (99), Expect = 1e-04
Identities = 28/84 (33%), Positives = 41/84 (48%)
Frame = +3
Query: 3 GSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNTC 182
G+GKT A++LP + + +P + LVL PTRELA Q+ QV +
Sbjct: 195 GTGKTAAFVLPILERMIYRP--KGASCTRVLVLVPTRELAIQVFQVFRKLSTFIQLEVCL 252
Query: 183 VFGGAPKREQARDLERGVEIVIAT 254
GG + Q L G ++V+AT
Sbjct: 253 CAGGLDLKAQEAALRSGPDVVVAT 276
>AF079508-1|AAC28387.1| 1156|Caenorhabditis elegans germline RNA
helicase-4 protein.
Length = 1156
Score = 48.0 bits (109), Expect = 6e-06
Identities = 31/89 (34%), Positives = 50/89 (56%), Gaps = 2/89 (2%)
Frame = +2
Query: 257 GRLIDFLEKGTTNLQRCTYLVLDEADRMLDMG-FEPQIRKII-EQIRPDRQTLMWSATWP 430
GRL DF+ G +L + Y+VLDEADRM+D F ++ KII +QT+++SA++
Sbjct: 875 GRLQDFVNAGEVSLSKMKYIVLDEADRMVDSNDFGEEVSKIIGSPGERTQQTVLFSASFS 934
Query: 431 KEVKKLAEDYLGDYIQINIGSLQLSAITT 517
++ L D L +++ LQ+ T
Sbjct: 935 ED---LQSDDLPKFVKEGYTMLQVDKFGT 960
Score = 39.1 bits (87), Expect = 0.003
Identities = 26/91 (28%), Positives = 44/91 (48%), Gaps = 7/91 (7%)
Frame = +3
Query: 3 GSGKTLAYILPAIVHINNQPPIRRG-----DGPIALVLAPTRELAQQIQQVAADFGHTSY 167
GSGKTLA+++P ++ + + R P L++APTREL Q A + +
Sbjct: 783 GSGKTLAFLIPFVIKLMEEFEKDRDVTDEKPSPRLLIVAPTRELVNQTFTTARQLTYETG 842
Query: 168 VRNTCVFGGAPKREQARDLE--RGVEIVIAT 254
++ FGG + + L + I++AT
Sbjct: 843 LKCGLAFGGYSRNANVQHLRSFSQLNILVAT 873
>AF039718-2|AAB96745.2| 1156|Caenorhabditis elegans Germ-line helicase
protein 4 protein.
Length = 1156
Score = 48.0 bits (109), Expect = 6e-06
Identities = 31/89 (34%), Positives = 50/89 (56%), Gaps = 2/89 (2%)
Frame = +2
Query: 257 GRLIDFLEKGTTNLQRCTYLVLDEADRMLDMG-FEPQIRKII-EQIRPDRQTLMWSATWP 430
GRL DF+ G +L + Y+VLDEADRM+D F ++ KII +QT+++SA++
Sbjct: 875 GRLQDFVNAGEVSLSKMKYIVLDEADRMVDSNDFGEEVSKIIGSPGERTQQTVLFSASFS 934
Query: 431 KEVKKLAEDYLGDYIQINIGSLQLSAITT 517
++ L D L +++ LQ+ T
Sbjct: 935 ED---LQSDDLPKFVKEGYTMLQVDKFGT 960
Score = 39.1 bits (87), Expect = 0.003
Identities = 26/91 (28%), Positives = 44/91 (48%), Gaps = 7/91 (7%)
Frame = +3
Query: 3 GSGKTLAYILPAIVHINNQPPIRRG-----DGPIALVLAPTRELAQQIQQVAADFGHTSY 167
GSGKTLA+++P ++ + + R P L++APTREL Q A + +
Sbjct: 783 GSGKTLAFLIPFVIKLMEEFEKDRDVTDEKPSPRLLIVAPTRELVNQTFTTARQLTYETG 842
Query: 168 VRNTCVFGGAPKREQARDLE--RGVEIVIAT 254
++ FGG + + L + I++AT
Sbjct: 843 LKCGLAFGGYSRNANVQHLRSFSQLNILVAT 873
>U08102-1|AAB65852.1| 417|Caenorhabditis elegans putative RNA
helicase protein.
Length = 417
Score = 46.4 bits (105), Expect = 2e-05
Identities = 22/77 (28%), Positives = 46/77 (59%)
Frame = +2
Query: 257 GRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSATWPKE 436
GR++ G L + Y VLDE D+M+ + +R+ +++I +Q +M+SAT PKE
Sbjct: 169 GRMLALARSGKLKLDKVKYFVLDECDKMIG---DADMRRDVQEI---KQVMMFSATLPKE 222
Query: 437 VKKLAEDYLGDYIQINI 487
++ + + ++ D +++ +
Sbjct: 223 LRTVCKRFMQDPMEVYV 239
>U80447-2|AAO38637.1| 579|Caenorhabditis elegans Hypothetical
protein F55F8.2b protein.
Length = 579
Score = 43.6 bits (98), Expect = 1e-04
Identities = 30/91 (32%), Positives = 49/91 (53%), Gaps = 7/91 (7%)
Frame = +3
Query: 3 GSGKTLAYILPAIVHI------NNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTS 164
GSGKTLA+ +P + + + + GP AL++APTREL QI + T+
Sbjct: 36 GSGKTLAFGIPLVARLLESSDDSQETESTEVRGPRALIVAPTRELVIQIMKHINALISTT 95
Query: 165 YVRNTCVFGGAPKREQARDL-ERGVEIVIAT 254
+ T + GG + +Q R + ++ +IV+AT
Sbjct: 96 QLIATSIVGGLAQVKQERIISQQRPDIVVAT 126
Score = 30.3 bits (65), Expect = 1.3
Identities = 16/42 (38%), Positives = 27/42 (64%), Gaps = 5/42 (11%)
Frame = +2
Query: 314 LVLDEADRMLDMGFEPQIRKIIEQIRPDR-----QTLMWSAT 424
LV+DE DRM++ G+ ++ I+ +I + QTL++SAT
Sbjct: 152 LVVDETDRMVEEGYFAELTHILNKIHEESEKEKLQTLVFSAT 193
>U80447-1|AAB37806.1| 746|Caenorhabditis elegans Hypothetical
protein F55F8.2a protein.
Length = 746
Score = 43.6 bits (98), Expect = 1e-04
Identities = 30/91 (32%), Positives = 49/91 (53%), Gaps = 7/91 (7%)
Frame = +3
Query: 3 GSGKTLAYILPAIVHI------NNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTS 164
GSGKTLA+ +P + + + + GP AL++APTREL QI + T+
Sbjct: 203 GSGKTLAFGIPLVARLLESSDDSQETESTEVRGPRALIVAPTRELVIQIMKHINALISTT 262
Query: 165 YVRNTCVFGGAPKREQARDL-ERGVEIVIAT 254
+ T + GG + +Q R + ++ +IV+AT
Sbjct: 263 QLIATSIVGGLAQVKQERIISQQRPDIVVAT 293
Score = 30.3 bits (65), Expect = 1.3
Identities = 16/42 (38%), Positives = 27/42 (64%), Gaps = 5/42 (11%)
Frame = +2
Query: 314 LVLDEADRMLDMGFEPQIRKIIEQIRPDR-----QTLMWSAT 424
LV+DE DRM++ G+ ++ I+ +I + QTL++SAT
Sbjct: 319 LVVDETDRMVEEGYFAELTHILNKIHEESEKEKLQTLVFSAT 360
>Z22177-1|CAA80151.1| 578|Caenorhabditis elegans Hypothetical
protein ZK512.2 protein.
Length = 578
Score = 42.7 bits (96), Expect = 2e-04
Identities = 30/85 (35%), Positives = 43/85 (50%), Gaps = 1/85 (1%)
Frame = +3
Query: 3 GSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNTC 182
GSGKTLA++LP + I N G AL+L+P+REL QI V F +
Sbjct: 56 GSGKTLAFVLPMMRMIQNAKLQPADIG--ALILSPSRELCSQIVSVIQPFAEKLNLTVET 113
Query: 183 VFGGAPKREQARDLE-RGVEIVIAT 254
V GG + + + + V I++AT
Sbjct: 114 VTGGQKVDKNIKMFKNKNVNILVAT 138
Score = 41.1 bits (92), Expect = 7e-04
Identities = 30/94 (31%), Positives = 47/94 (50%), Gaps = 4/94 (4%)
Frame = +2
Query: 257 GRLIDFLEKGTTNLQR----CTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSAT 424
GRL ++ T + R LV+DEADR ++ FE +R+I+ I R+T ++SAT
Sbjct: 140 GRLFQIIQHEKTLIARKMRTLQLLVIDEADRFNEIQFEDHMREILSCIPKQRRTGLFSAT 199
Query: 425 WPKEVKKLAEDYLGDYIQINIGSLQLSAITTFFK 526
KE L L + Q+ + + SA + K
Sbjct: 200 QVKEEDDLMVFGLRNAKQVKVAQERNSAAPSTLK 233
>AF025451-4|AAL16306.1| 567|Caenorhabditis elegans Hypothetical
protein C24H12.4b protein.
Length = 567
Score = 42.7 bits (96), Expect = 2e-04
Identities = 28/77 (36%), Positives = 44/77 (57%), Gaps = 3/77 (3%)
Frame = +2
Query: 308 TYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAEDYL-GDYIQIN 484
+YLV+DEAD +L G+E ++ KI ++ P Q LM SAT ++ L + ++ G I I
Sbjct: 172 SYLVMDEADLLLSFGYEEEMIKIRSKLPPTYQCLMTSATLKDDMTTLKKLFMTGPVITIK 231
Query: 485 I--GSLQLSAITTFFKL 529
+ G L S T ++L
Sbjct: 232 LTEGDLPNSDQLTQYQL 248
Score = 27.5 bits (58), Expect = 9.4
Identities = 13/39 (33%), Positives = 24/39 (61%), Gaps = 3/39 (7%)
Frame = +3
Query: 33 PAIVHINNQPPIRRGDG---PIALVLAPTRELAQQIQQV 140
P + ++ +P + DG P A+++APT+EL QI ++
Sbjct: 77 PQVDEMDFEPEHKTNDGSVGPSAVIIAPTKELITQIYKL 115
>AF025451-3|AAB71200.2| 634|Caenorhabditis elegans Hypothetical
protein C24H12.4a protein.
Length = 634
Score = 42.7 bits (96), Expect = 2e-04
Identities = 28/77 (36%), Positives = 44/77 (57%), Gaps = 3/77 (3%)
Frame = +2
Query: 308 TYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAEDYL-GDYIQIN 484
+YLV+DEAD +L G+E ++ KI ++ P Q LM SAT ++ L + ++ G I I
Sbjct: 239 SYLVMDEADLLLSFGYEEEMIKIRSKLPPTYQCLMTSATLKDDMTTLKKLFMTGPVITIK 298
Query: 485 I--GSLQLSAITTFFKL 529
+ G L S T ++L
Sbjct: 299 LTEGDLPNSDQLTQYQL 315
Score = 37.9 bits (84), Expect = 0.007
Identities = 18/47 (38%), Positives = 30/47 (63%), Gaps = 1/47 (2%)
Frame = +3
Query: 3 GSGKTLAYILPAIVHINNQPPIRRGD-GPIALVLAPTRELAQQIQQV 140
GSGKT A+++P + + + G GP A+++APT+EL QI ++
Sbjct: 136 GSGKTGAFLIPLVQKLIAESKTNDGSVGPSAVIIAPTKELITQIYKL 182
>U64840-7|AAB04965.1| 340|Caenorhabditis elegans Hypothetical
protein ZC317.1 protein.
Length = 340
Score = 38.7 bits (86), Expect = 0.004
Identities = 23/67 (34%), Positives = 37/67 (55%), Gaps = 5/67 (7%)
Frame = +2
Query: 248 CYSGRLIDFLEKGTTNLQRCTYLVLDEADRMLD-MGFEPQIRKIIEQIRPDR----QTLM 412
C G+L +E G L ++LDEAD+M+D F P I I++Q++ + Q+
Sbjct: 129 CTIGKLKATIECGDVCLDNLKTIILDEADKMIDNCAFVPDINWILDQLKEENLENLQSCF 188
Query: 413 WSATWPK 433
+SAT+ K
Sbjct: 189 FSATYNK 195
>U53141-4|AAA96106.1| 528|Caenorhabditis elegans Mutator protein 14
protein.
Length = 528
Score = 38.7 bits (86), Expect = 0.004
Identities = 23/67 (34%), Positives = 37/67 (55%), Gaps = 5/67 (7%)
Frame = +2
Query: 248 CYSGRLIDFLEKGTTNLQRCTYLVLDEADRMLD-MGFEPQIRKIIEQIRPDR----QTLM 412
C G+L +E G L ++LDEAD+M+D F P I I++Q++ + Q+
Sbjct: 229 CTIGKLKATIECGDVCLDNLKTIILDEADKMIDNCAFGPDINWILDQLKEENLENLQSCF 288
Query: 413 WSATWPK 433
+SAT+ K
Sbjct: 289 FSATYNK 295
>Z92785-2|CAB07200.1| 344|Caenorhabditis elegans Hypothetical
protein F31E9.4 protein.
Length = 344
Score = 32.7 bits (71), Expect = 0.25
Identities = 17/64 (26%), Positives = 31/64 (48%)
Frame = +2
Query: 272 FLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLA 451
FLE+ + C YL+++E LD ++ Q +++E I ++ ++ W K
Sbjct: 113 FLEQEEKMPRSCEYLIINEISTGLDEFWQHQKDELVESISVEKGIVLSGEAWSNSDKIYN 172
Query: 452 EDYL 463
DYL
Sbjct: 173 VDYL 176
>Z75546-3|CAA99891.1| 581|Caenorhabditis elegans Hypothetical
protein R05D11.4 protein.
Length = 581
Score = 32.3 bits (70), Expect = 0.33
Identities = 20/47 (42%), Positives = 27/47 (57%), Gaps = 5/47 (10%)
Frame = +3
Query: 3 GSGKTLAYILPA---IVHINNQPPIRRGDGP--IALVLAPTRELAQQ 128
GSGKTLA+ LP I+ + + + +A+VL PTRELA Q
Sbjct: 173 GSGKTLAFALPVIDEILELKQRADYSSSNSSKLLAVVLEPTRELAAQ 219
>L17337-1|AAP68928.1| 593|Caenorhabditis elegans Hypothetical
protein ZK686.2 protein.
Length = 593
Score = 32.3 bits (70), Expect = 0.33
Identities = 25/86 (29%), Positives = 39/86 (45%), Gaps = 2/86 (2%)
Frame = +3
Query: 3 GSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNTC 182
GSGKT+ Y+LP + + ++P A++L P + L QI + S V
Sbjct: 166 GSGKTICYVLPVLAAVGSKP----SKILQAVILVPVQTLVAQIVDEFKRWNDESGVAKVV 221
Query: 183 VFGGAPKRE-QARDLERG-VEIVIAT 254
GA E +AR L +++AT
Sbjct: 222 SLSGANDFEKEARQLASDPPNVIVAT 247
>AF125963-6|AAK95885.1| 520|Caenorhabditis elegans Hypothetical
protein Y38A10A.6 protein.
Length = 520
Score = 32.3 bits (70), Expect = 0.33
Identities = 16/51 (31%), Positives = 29/51 (56%), Gaps = 1/51 (1%)
Frame = +2
Query: 248 CYSGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMG-FEPQIRKIIEQIRPD 397
C G+L +E T L ++LDE+D+M+D+ F I +++Q++ D
Sbjct: 228 CTMGKLKASIEDKTILLDNLKMMILDESDKMIDIACFGNDIDWVLDQLQED 278
Score = 29.5 bits (63), Expect = 2.3
Identities = 17/47 (36%), Positives = 26/47 (55%), Gaps = 4/47 (8%)
Frame = +3
Query: 3 GSGKTLAYILPAI-VHINNQP---PIRRGDGPIALVLAPTRELAQQI 131
G GKT A+++PAI + + +P I P L+LA T L +Q+
Sbjct: 139 GIGKTYAFLIPAIEIALRERPLLTNISTTPSPTILILANTNSLVEQL 185
>Z81481-6|CAB63435.1| 344|Caenorhabditis elegans Hypothetical
protein C38D9.8 protein.
Length = 344
Score = 31.9 bits (69), Expect = 0.44
Identities = 17/64 (26%), Positives = 31/64 (48%)
Frame = +2
Query: 272 FLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLA 451
FLE+ + C YL+++E LD ++ Q +++E I ++ ++ W K
Sbjct: 113 FLEQEEKMPRSCEYLIINEFSTGLDEFWQHQKDELVETISVEKGIVLSGEAWSSSDKIYN 172
Query: 452 EDYL 463
DYL
Sbjct: 173 VDYL 176
>Z50071-3|CAA90407.1| 613|Caenorhabditis elegans Hypothetical
protein T07D4.4c protein.
Length = 613
Score = 30.7 bits (66), Expect = 1.0
Identities = 19/51 (37%), Positives = 27/51 (52%)
Frame = +3
Query: 3 GSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 155
G+GKT A++L + I+ P + LAPT ELA+QI +V G
Sbjct: 258 GTGKTAAFVLTMLCRIDVNLMC-----PQCICLAPTLELAKQIGEVVEKMG 303
>Z50071-2|CAA90406.1| 638|Caenorhabditis elegans Hypothetical
protein T07D4.4b protein.
Length = 638
Score = 30.7 bits (66), Expect = 1.0
Identities = 19/51 (37%), Positives = 27/51 (52%)
Frame = +3
Query: 3 GSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 155
G+GKT A++L + I+ P + LAPT ELA+QI +V G
Sbjct: 283 GTGKTAAFVLTMLCRIDVNLMC-----PQCICLAPTLELAKQIGEVVEKMG 328
>Z50071-1|CAA90408.1| 1022|Caenorhabditis elegans Hypothetical
protein T07D4.4a protein.
Length = 1022
Score = 30.7 bits (66), Expect = 1.0
Identities = 19/51 (37%), Positives = 27/51 (52%)
Frame = +3
Query: 3 GSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 155
G+GKT A++L + I+ P + LAPT ELA+QI +V G
Sbjct: 667 GTGKTAAFVLTMLCRIDVNLMC-----PQCICLAPTLELAKQIGEVVEKMG 712
>U40933-4|AAA81674.1| 778|Caenorhabditis elegans Caenorhabditis
zeste white 10 (drosophila) homolog protein 1 protein.
Length = 778
Score = 29.1 bits (62), Expect = 3.1
Identities = 13/27 (48%), Positives = 18/27 (66%)
Frame = +1
Query: 133 SKLLQILDTHLMFVTRVCLVVLLKESK 213
+KLL LDT +FVTR C ++ K +K
Sbjct: 372 AKLLFTLDTDTIFVTRRCFAIVSKANK 398
>AF100656-7|AAF99964.2| 615|Caenorhabditis elegans Hypothetical
protein F49F1.8 protein.
Length = 615
Score = 28.7 bits (61), Expect = 4.1
Identities = 18/74 (24%), Positives = 38/74 (51%)
Frame = +1
Query: 412 VVSYLAQRSEETC*GLLGRLHSDQYRIITTFRNHNILQIVDICQEHEKENKLNVLLQEIG 591
V++ L +S+ T G + D + +F +H + ++ E++KEN+L Q+ G
Sbjct: 126 VMAVLGIKSDVTISAFSGSMREDLVALRRSFMDH-LGASTEVLTENKKENELRKCKQKDG 184
Query: 592 QSQEPGAKTIIFVE 633
+S + + I+ +E
Sbjct: 185 ESVDDFYQRILALE 198
>Z73907-1|CAA98124.1| 4753|Caenorhabditis elegans Hypothetical protein
F29D11.1 protein.
Length = 4753
Score = 27.5 bits (58), Expect = 9.4
Identities = 9/30 (30%), Positives = 19/30 (63%)
Frame = +2
Query: 281 KGTTNLQRCTYLVLDEADRMLDMGFEPQIR 370
KG T + TY++ + D+++D+ EP ++
Sbjct: 2434 KGRTCEEPDTYIMFSDGDKIIDVAIEPDVK 2463
>M96150-1|AAA28105.1| 4753|Caenorhabditis elegans LDL receptor-related
protein protein.
Length = 4753
Score = 27.5 bits (58), Expect = 9.4
Identities = 9/30 (30%), Positives = 19/30 (63%)
Frame = +2
Query: 281 KGTTNLQRCTYLVLDEADRMLDMGFEPQIR 370
KG T + TY++ + D+++D+ EP ++
Sbjct: 2434 KGRTCEEPDTYIMFSDGDKIIDVAIEPDVK 2463
>AL021175-8|CAA15970.2| 201|Caenorhabditis elegans Hypothetical
protein Y6E2A.9b protein.
Length = 201
Score = 27.5 bits (58), Expect = 9.4
Identities = 18/60 (30%), Positives = 27/60 (45%)
Frame = +2
Query: 116 VSTTNSASCCRFWTHILCS*HVCVWWCS*KRASPGLGEGSRNSHCYSGRLIDFLEKGTTN 295
V+ TN + CR L + C + A+ GL +NSH +GRL+ F+ N
Sbjct: 134 VNYTNRSGNCRTTNQQLLYSYFCATGAA-TTAALGLNMMVKNSHGLAGRLVPFVAVAVAN 192
>AL021175-7|CAE54921.1| 329|Caenorhabditis elegans Hypothetical
protein Y6E2A.9a protein.
Length = 329
Score = 27.5 bits (58), Expect = 9.4
Identities = 18/60 (30%), Positives = 27/60 (45%)
Frame = +2
Query: 116 VSTTNSASCCRFWTHILCS*HVCVWWCS*KRASPGLGEGSRNSHCYSGRLIDFLEKGTTN 295
V+ TN + CR L + C + A+ GL +NSH +GRL+ F+ N
Sbjct: 134 VNYTNRSGNCRTTNQQLLYSYFCATGAA-TTAALGLNMMVKNSHGLAGRLVPFVAVAVAN 192
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,244,070
Number of Sequences: 27780
Number of extensions: 348706
Number of successful extensions: 1145
Number of sequences better than 10.0: 61
Number of HSP's better than 10.0 without gapping: 1019
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1099
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1550199966
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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