Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV120007.Seq
(661 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ271736-3|CAB96818.1| 190|Homo sapiens hypothetical protein pr... 38 0.042
Y18448-1|CAA77176.1| 3851|Homo sapiens Bassoon protein protein. 33 0.68
AF052224-1|AAC83555.1| 3926|Homo sapiens neuronal double zinc fi... 33 0.68
AB007894-1|BAA23707.1| 1571|Homo sapiens KIAA0434 protein. 33 0.68
U31501-1|AAC50292.1| 673|Homo sapiens fragile X mental retardat... 32 1.6
BT009817-1|AAP88819.1| 673|Homo sapiens fragile X mental retard... 32 1.6
BC067272-1|AAH67272.1| 673|Homo sapiens fragile X mental retard... 32 1.6
BC051907-1|AAH51907.1| 673|Homo sapiens fragile X mental retard... 32 1.6
BC020090-1|AAH20090.1| 673|Homo sapiens fragile X mental retard... 32 1.6
AL356115-1|CAI40902.1| 588|Homo sapiens KIAA1128 protein. 32 1.6
AK024324-1|BAB14884.1| 701|Homo sapiens protein ( Homo sapiens ... 32 1.6
AF387615-1|AAL91356.1| 46|Homo sapiens gm139 protein. 32 1.6
AF241785-1|AAG44473.1| 566|Homo sapiens NPD012 protein. 32 1.6
AB032954-1|BAA86442.1| 588|Homo sapiens KIAA1128 protein protein. 32 1.6
BC146754-1|AAI46755.1| 926|Homo sapiens storkhead box 2 protein. 32 2.1
AB037813-1|BAA92630.1| 950|Homo sapiens KIAA1392 protein protein. 32 2.1
U82808-1|AAD00539.1| 491|Homo sapiens muscle-specific serine ki... 31 3.6
DQ099381-1|AAZ13757.1| 566|Homo sapiens serine/threonine kinase... 31 3.6
BC117124-1|AAI17125.1| 566|Homo sapiens SFRS protein kinase 3 p... 31 3.6
BC092416-1|AAH92416.1| 567|Homo sapiens SFRS protein kinase 3 p... 31 3.6
BC008455-1|AAH08455.1| 259|Homo sapiens uncharacterized hematop... 31 3.6
AF220052-1|AAF67645.1| 259|Homo sapiens uncharacterized hematop... 31 3.6
AF027406-1|AAD01848.1| 533|Homo sapiens muscle-specific serine ... 31 3.6
AB209155-1|BAD92392.1| 699|Homo sapiens serine/threonine kinase... 31 3.6
AB097050-1|BAC77403.1| 259|Homo sapiens putative MAPK activatin... 31 3.6
AK055096-1|BAB70854.1| 155|Homo sapiens protein ( Homo sapiens ... 27 4.1
AB209299-1|BAD92536.1| 954|Homo sapiens aldehyde dehydrogenase ... 31 4.8
BC009449-1|AAH09449.1| 569|Homo sapiens MGC2641 protein protein. 30 6.4
AY358600-1|AAQ88963.1| 671|Homo sapiens HGDF-related pro 2 prot... 30 6.4
AF294267-1|AAP97281.1| 671|Homo sapiens hepatoma-derived growth... 30 6.4
X98801-1|CAA67333.1| 1263|Homo sapiens dynactin protein. 30 8.4
U90445-1|AAD00701.1| 405|Homo sapiens p150Glued homolog protein. 30 8.4
BC071583-1|AAH71583.1| 1139|Homo sapiens DCTN1 protein protein. 30 8.4
BC026916-1|AAH26916.1| 408|Homo sapiens SERPINE1 mRNA binding p... 30 8.4
BC019273-1|AAH19273.1| 408|Homo sapiens SERPINE1 mRNA binding p... 30 8.4
BC011993-1|AAH11993.1| 380|Homo sapiens hypothetical protein LO... 30 8.4
BC008045-1|AAH08045.1| 408|Homo sapiens SERPINE1 mRNA binding p... 30 8.4
BC003049-1|AAH03049.1| 408|Homo sapiens SERPINE1 mRNA binding p... 30 8.4
AY032853-1|AAK51130.1| 309|Homo sapiens CGI-55 protein. 30 8.4
AL590559-3|CAH73323.1| 408|Homo sapiens PAI-1 mRNA-binding prot... 30 8.4
AL590559-1|CAH73326.1| 393|Homo sapiens PAI-1 mRNA-binding prot... 30 8.4
AK128697-1|BAC87576.1| 211|Homo sapiens protein ( Homo sapiens ... 30 8.4
AK074970-1|BAC11324.1| 408|Homo sapiens protein ( Homo sapiens ... 30 8.4
AK022498-1|BAB14060.1| 302|Homo sapiens protein ( Homo sapiens ... 30 8.4
AF151813-1|AAD34050.1| 393|Homo sapiens CGI-55 protein protein. 30 8.4
AF086947-1|AAD03694.1| 1261|Homo sapiens dynactin 1 protein. 30 8.4
AF064205-2|AAD55812.1| 1144|Homo sapiens dynactin 1 p135 isoform... 30 8.4
AF064205-1|AAD55811.1| 1278|Homo sapiens dynactin 1 p150 isoform... 30 8.4
>AJ271736-3|CAB96818.1| 190|Homo sapiens hypothetical protein
protein.
Length = 190
Score = 37.5 bits (83), Expect = 0.042
Identities = 16/30 (53%), Positives = 17/30 (56%)
Frame = -3
Query: 458 TPWPVPGRGPCQPRRDLGARLRGPSLFPRP 369
TP P RGPC+PRR G RL FP P
Sbjct: 27 TPTPTLNRGPCRPRRQAGRRLLDTVSFPSP 56
Score = 31.1 bits (67), Expect = 3.6
Identities = 16/40 (40%), Positives = 21/40 (52%), Gaps = 3/40 (7%)
Frame = -2
Query: 120 SRSGPSAAPSCP*TRPSS---GDCLSSNRLYRAPCQKSRQ 10
+R G + P+ P T PSS G C + L R PC+ RQ
Sbjct: 3 TRWGTNTTPTAPTTTPSSXGAGQCTPTPTLNRGPCRPRRQ 42
>Y18448-1|CAA77176.1| 3851|Homo sapiens Bassoon protein protein.
Length = 3851
Score = 33.5 bits (73), Expect = 0.68
Identities = 18/53 (33%), Positives = 23/53 (43%)
Frame = +2
Query: 32 ARYSRFDDKQSPEDGRVQGHDGAADGPERERPVHHRGGRDRQPGRHHGGDEDR 190
AR+S D + PE+G + HD G H G R GRH G + R
Sbjct: 3538 ARHSYHDYDEPPEEG-LWPHDEGGPGRHASAKEHRHGDHGRHSGRHTGEEPGR 3589
>AF052224-1|AAC83555.1| 3926|Homo sapiens neuronal double zinc finger
protein protein.
Length = 3926
Score = 33.5 bits (73), Expect = 0.68
Identities = 18/53 (33%), Positives = 23/53 (43%)
Frame = +2
Query: 32 ARYSRFDDKQSPEDGRVQGHDGAADGPERERPVHHRGGRDRQPGRHHGGDEDR 190
AR+S D + PE+G + HD G H G R GRH G + R
Sbjct: 3613 ARHSYHDYDEPPEEG-LWPHDEGGPGRHASAKEHRHGDHGRHSGRHTGEEPGR 3664
>AB007894-1|BAA23707.1| 1571|Homo sapiens KIAA0434 protein.
Length = 1571
Score = 33.5 bits (73), Expect = 0.68
Identities = 18/53 (33%), Positives = 23/53 (43%)
Frame = +2
Query: 32 ARYSRFDDKQSPEDGRVQGHDGAADGPERERPVHHRGGRDRQPGRHHGGDEDR 190
AR+S D + PE+G + HD G H G R GRH G + R
Sbjct: 1258 ARHSYHDYDEPPEEG-LWPHDEGGPGRHASAKEHRHGDHGRHSGRHTGEEPGR 1309
>U31501-1|AAC50292.1| 673|Homo sapiens fragile X mental retardation
syndrome related protein protein.
Length = 673
Score = 32.3 bits (70), Expect = 1.6
Identities = 18/41 (43%), Positives = 21/41 (51%)
Frame = -3
Query: 443 PGRGPCQPRRDLGARLRGPSLFPRPTWRSTARR*LSIV*DP 321
P RG RR G R RGP PRPT R + S++ DP
Sbjct: 474 PTRGEESRRRPTGGRGRGPPPAPRPTSRYNSSSISSVLKDP 514
>BT009817-1|AAP88819.1| 673|Homo sapiens fragile X mental
retardation, autosomal homolog 2 protein.
Length = 673
Score = 32.3 bits (70), Expect = 1.6
Identities = 18/41 (43%), Positives = 21/41 (51%)
Frame = -3
Query: 443 PGRGPCQPRRDLGARLRGPSLFPRPTWRSTARR*LSIV*DP 321
P RG RR G R RGP PRPT R + S++ DP
Sbjct: 474 PTRGEESRRRPTGGRGRGPPPAPRPTSRYNSSSISSVLKDP 514
>BC067272-1|AAH67272.1| 673|Homo sapiens fragile X mental
retardation, autosomal homolog 2 protein.
Length = 673
Score = 32.3 bits (70), Expect = 1.6
Identities = 18/41 (43%), Positives = 21/41 (51%)
Frame = -3
Query: 443 PGRGPCQPRRDLGARLRGPSLFPRPTWRSTARR*LSIV*DP 321
P RG RR G R RGP PRPT R + S++ DP
Sbjct: 474 PTRGEESRRRPTGGRGRGPPPAPRPTSRYNSSSISSVLKDP 514
>BC051907-1|AAH51907.1| 673|Homo sapiens fragile X mental
retardation, autosomal homolog 2 protein.
Length = 673
Score = 32.3 bits (70), Expect = 1.6
Identities = 18/41 (43%), Positives = 21/41 (51%)
Frame = -3
Query: 443 PGRGPCQPRRDLGARLRGPSLFPRPTWRSTARR*LSIV*DP 321
P RG RR G R RGP PRPT R + S++ DP
Sbjct: 474 PTRGEESRRRPTGGRGRGPPPAPRPTSRYNSSSISSVLKDP 514
>BC020090-1|AAH20090.1| 673|Homo sapiens fragile X mental
retardation, autosomal homolog 2 protein.
Length = 673
Score = 32.3 bits (70), Expect = 1.6
Identities = 18/41 (43%), Positives = 21/41 (51%)
Frame = -3
Query: 443 PGRGPCQPRRDLGARLRGPSLFPRPTWRSTARR*LSIV*DP 321
P RG RR G R RGP PRPT R + S++ DP
Sbjct: 474 PTRGEESRRRPTGGRGRGPPPAPRPTSRYNSSSISSVLKDP 514
>AL356115-1|CAI40902.1| 588|Homo sapiens KIAA1128 protein.
Length = 588
Score = 32.3 bits (70), Expect = 1.6
Identities = 30/109 (27%), Positives = 45/109 (41%), Gaps = 5/109 (4%)
Frame = +2
Query: 131 HHRGGRDRQPGRHH-----GGDEDRVRLPGTTSPKFEVDAGEYKSSFSKQTSLIEHMHNQ 295
HH G D G + G E +P + K VD E + T + HM
Sbjct: 368 HHHGKSDLSRGSPYRESPLGHFESYGGMPFFQAQKMFVDVPENTVILDEMT--LRHMVQD 425
Query: 296 EHLVETQMKDLKRLIVTASQSSAKSDAEIAKALSVVHQDLDEADKDRDL 442
V+TQ+ LKRL+ S + D +++ S +D D+ K+ DL
Sbjct: 426 CTAVKTQLLKLKRLLHQHDGSGSLHDIQLSLPSSPEPEDGDKVYKNEDL 474
>AK024324-1|BAB14884.1| 701|Homo sapiens protein ( Homo sapiens
cDNA FLJ14262 fis, clone PLACE1001608. ).
Length = 701
Score = 32.3 bits (70), Expect = 1.6
Identities = 30/109 (27%), Positives = 45/109 (41%), Gaps = 5/109 (4%)
Frame = +2
Query: 131 HHRGGRDRQPGRHH-----GGDEDRVRLPGTTSPKFEVDAGEYKSSFSKQTSLIEHMHNQ 295
HH G D G + G E +P + K VD E + T + HM
Sbjct: 585 HHHGKSDLSRGSPYRESPLGHFESYGGMPFFQAQKMFVDVPENTVILDEMT--LRHMVQD 642
Query: 296 EHLVETQMKDLKRLIVTASQSSAKSDAEIAKALSVVHQDLDEADKDRDL 442
V+TQ+ LKRL+ S + D +++ S +D D+ K+ DL
Sbjct: 643 CTAVKTQLLKLKRLLHQHDGSGSLHDIQLSLPSSPEPEDGDKVYKNEDL 691
>AF387615-1|AAL91356.1| 46|Homo sapiens gm139 protein.
Length = 46
Score = 32.3 bits (70), Expect = 1.6
Identities = 15/35 (42%), Positives = 18/35 (51%)
Frame = +2
Query: 74 GRVQGHDGAADGPERERPVHHRGGRDRQPGRHHGG 178
G +GH+ AA GP R HH+G R Q H G
Sbjct: 7 GEPRGHEAAARGPHRAAR-HHQGPRGAQDAEHPAG 40
>AF241785-1|AAG44473.1| 566|Homo sapiens NPD012 protein.
Length = 566
Score = 32.3 bits (70), Expect = 1.6
Identities = 30/109 (27%), Positives = 45/109 (41%), Gaps = 5/109 (4%)
Frame = +2
Query: 131 HHRGGRDRQPGRHH-----GGDEDRVRLPGTTSPKFEVDAGEYKSSFSKQTSLIEHMHNQ 295
HH G D G + G E +P + K VD E + T + HM
Sbjct: 346 HHHGKSDLSRGSPYRESPLGHFESYGGMPFFQAQKMFVDVPENTVILDEMT--LRHMVQD 403
Query: 296 EHLVETQMKDLKRLIVTASQSSAKSDAEIAKALSVVHQDLDEADKDRDL 442
V+TQ+ LKRL+ S + D +++ S +D D+ K+ DL
Sbjct: 404 CTAVKTQLLKLKRLLHQHDGSGSLHDIQLSLPSSPEPEDGDKVYKNEDL 452
>AB032954-1|BAA86442.1| 588|Homo sapiens KIAA1128 protein protein.
Length = 588
Score = 32.3 bits (70), Expect = 1.6
Identities = 30/109 (27%), Positives = 45/109 (41%), Gaps = 5/109 (4%)
Frame = +2
Query: 131 HHRGGRDRQPGRHH-----GGDEDRVRLPGTTSPKFEVDAGEYKSSFSKQTSLIEHMHNQ 295
HH G D G + G E +P + K VD E + T + HM
Sbjct: 368 HHHGKSDLSRGSPYRESPLGHFESYGGMPFFQAQKMFVDVPENTVILDEMT--LRHMVQD 425
Query: 296 EHLVETQMKDLKRLIVTASQSSAKSDAEIAKALSVVHQDLDEADKDRDL 442
V+TQ+ LKRL+ S + D +++ S +D D+ K+ DL
Sbjct: 426 CTAVKTQLLKLKRLLHQHDGSGSLHDIQLSLPSSPEPEDGDKVYKNEDL 474
>BC146754-1|AAI46755.1| 926|Homo sapiens storkhead box 2 protein.
Length = 926
Score = 31.9 bits (69), Expect = 2.1
Identities = 14/28 (50%), Positives = 16/28 (57%)
Frame = -3
Query: 164 GPAGGPAPRDGVQDARAPGHLLLHHVPE 81
GP GGPA GV + A G L+ HH E
Sbjct: 660 GPGGGPAASGGVAEGIANGRLVQHHGAE 687
>AB037813-1|BAA92630.1| 950|Homo sapiens KIAA1392 protein protein.
Length = 950
Score = 31.9 bits (69), Expect = 2.1
Identities = 14/28 (50%), Positives = 16/28 (57%)
Frame = -3
Query: 164 GPAGGPAPRDGVQDARAPGHLLLHHVPE 81
GP GGPA GV + A G L+ HH E
Sbjct: 684 GPGGGPAASGGVAEGIANGRLVQHHGAE 711
>U82808-1|AAD00539.1| 491|Homo sapiens muscle-specific serine
kinase 1 protein.
Length = 491
Score = 31.1 bits (67), Expect = 3.6
Identities = 23/74 (31%), Positives = 34/74 (45%), Gaps = 6/74 (8%)
Frame = +2
Query: 161 GRHHGGDEDR----VRLPGTTSPKFEVDAGEYKSSFSKQTSLIEHMHNQEH--LVETQMK 322
G + DED V L G P F + +G Y F + + H+HN +H L E M+
Sbjct: 392 GEDYSRDEDHIAHIVELLGDIPPAFAL-SGRYSREFFNRRGELRHIHNLKHWGLYEVLME 450
Query: 323 DLKRLIVTASQSSA 364
+ + A+Q SA
Sbjct: 451 KYEWPLEQATQFSA 464
>DQ099381-1|AAZ13757.1| 566|Homo sapiens serine/threonine kinase 23
protein.
Length = 566
Score = 31.1 bits (67), Expect = 3.6
Identities = 23/74 (31%), Positives = 34/74 (45%), Gaps = 6/74 (8%)
Frame = +2
Query: 161 GRHHGGDEDR----VRLPGTTSPKFEVDAGEYKSSFSKQTSLIEHMHNQEH--LVETQMK 322
G + DED V L G P F + +G Y F + + H+HN +H L E M+
Sbjct: 467 GEDYSRDEDHIAHIVELLGDIPPAFAL-SGRYSREFFNRRGELRHIHNLKHWGLYEVLME 525
Query: 323 DLKRLIVTASQSSA 364
+ + A+Q SA
Sbjct: 526 KYEWPLEQATQFSA 539
>BC117124-1|AAI17125.1| 566|Homo sapiens SFRS protein kinase 3
protein.
Length = 566
Score = 31.1 bits (67), Expect = 3.6
Identities = 23/74 (31%), Positives = 34/74 (45%), Gaps = 6/74 (8%)
Frame = +2
Query: 161 GRHHGGDEDR----VRLPGTTSPKFEVDAGEYKSSFSKQTSLIEHMHNQEH--LVETQMK 322
G + DED V L G P F + +G Y F + + H+HN +H L E M+
Sbjct: 467 GEDYSRDEDHIAHIVELLGDIPPAFAL-SGRYSREFFNRRGELRHIHNLKHWGLYEVLME 525
Query: 323 DLKRLIVTASQSSA 364
+ + A+Q SA
Sbjct: 526 KYEWPLEQATQFSA 539
>BC092416-1|AAH92416.1| 567|Homo sapiens SFRS protein kinase 3
protein.
Length = 567
Score = 31.1 bits (67), Expect = 3.6
Identities = 23/74 (31%), Positives = 34/74 (45%), Gaps = 6/74 (8%)
Frame = +2
Query: 161 GRHHGGDEDR----VRLPGTTSPKFEVDAGEYKSSFSKQTSLIEHMHNQEH--LVETQMK 322
G + DED V L G P F + +G Y F + + H+HN +H L E M+
Sbjct: 468 GEDYSRDEDHIAHIVELLGDIPPAFAL-SGRYSREFFNRRGELRHIHNLKHWGLYEVLME 526
Query: 323 DLKRLIVTASQSSA 364
+ + A+Q SA
Sbjct: 527 KYEWPLEQATQFSA 540
>BC008455-1|AAH08455.1| 259|Homo sapiens uncharacterized
hematopoietic stem/progenitor cells protein MDS032
protein.
Length = 259
Score = 31.1 bits (67), Expect = 3.6
Identities = 27/94 (28%), Positives = 45/94 (47%), Gaps = 4/94 (4%)
Frame = +2
Query: 239 EYKSSFSKQTSLIEHMHNQEHLVETQMKDLKRLIVT---ASQSSAKSDAE-IAKALSVVH 406
E +S+ L H + QE L E +M L R + T A+QS K D + ++ +L +
Sbjct: 151 EKQSAAELDLVLQRHQNLQEKLAE-EMLGLARSLKTNTLAAQSVIKKDNQTLSHSLKMAD 209
Query: 407 QDLDEADKDRDLEPAKVSLEPNQILTGIGIIVCF 508
Q+L++ + + N +L + IIVCF
Sbjct: 210 QNLEKLKTESERLEQHTQKSVNWLLWAMLIIVCF 243
>AF220052-1|AAF67645.1| 259|Homo sapiens uncharacterized
hematopoietic stem/progenitor cells protein MDS032
protein.
Length = 259
Score = 31.1 bits (67), Expect = 3.6
Identities = 27/94 (28%), Positives = 45/94 (47%), Gaps = 4/94 (4%)
Frame = +2
Query: 239 EYKSSFSKQTSLIEHMHNQEHLVETQMKDLKRLIVT---ASQSSAKSDAE-IAKALSVVH 406
E +S+ L H + QE L E +M L R + T A+QS K D + ++ +L +
Sbjct: 151 EKQSAAELDLVLQRHQNLQEKLAE-EMLGLARSLKTNTLAAQSVIKKDNQTLSHSLKMAD 209
Query: 407 QDLDEADKDRDLEPAKVSLEPNQILTGIGIIVCF 508
Q+L++ + + N +L + IIVCF
Sbjct: 210 QNLEKLKTESERLEQHTQKSVNWLLWAMLIIVCF 243
>AF027406-1|AAD01848.1| 533|Homo sapiens muscle-specific serine
kinase 1 protein.
Length = 533
Score = 31.1 bits (67), Expect = 3.6
Identities = 23/74 (31%), Positives = 34/74 (45%), Gaps = 6/74 (8%)
Frame = +2
Query: 161 GRHHGGDEDR----VRLPGTTSPKFEVDAGEYKSSFSKQTSLIEHMHNQEH--LVETQMK 322
G + DED V L G P F + +G Y F + + H+HN +H L E M+
Sbjct: 434 GEDYSRDEDHIAHIVELLGDIPPAFAL-SGRYSREFFNRRGELRHIHNLKHWGLYEVLME 492
Query: 323 DLKRLIVTASQSSA 364
+ + A+Q SA
Sbjct: 493 KYEWPLEQATQFSA 506
>AB209155-1|BAD92392.1| 699|Homo sapiens serine/threonine kinase 23
variant protein.
Length = 699
Score = 31.1 bits (67), Expect = 3.6
Identities = 23/74 (31%), Positives = 34/74 (45%), Gaps = 6/74 (8%)
Frame = +2
Query: 161 GRHHGGDEDR----VRLPGTTSPKFEVDAGEYKSSFSKQTSLIEHMHNQEH--LVETQMK 322
G + DED V L G P F + +G Y F + + H+HN +H L E M+
Sbjct: 600 GEDYSRDEDHIAHIVELLGDIPPAFAL-SGRYSREFFNRRGELRHIHNLKHWGLYEVLME 658
Query: 323 DLKRLIVTASQSSA 364
+ + A+Q SA
Sbjct: 659 KYEWPLEQATQFSA 672
>AB097050-1|BAC77403.1| 259|Homo sapiens putative MAPK activating
protein protein.
Length = 259
Score = 31.1 bits (67), Expect = 3.6
Identities = 27/94 (28%), Positives = 45/94 (47%), Gaps = 4/94 (4%)
Frame = +2
Query: 239 EYKSSFSKQTSLIEHMHNQEHLVETQMKDLKRLIVT---ASQSSAKSDAE-IAKALSVVH 406
E +S+ L H + QE L E +M L R + T A+QS K D + ++ +L +
Sbjct: 151 EKQSAAELDLVLQRHQNLQEKLAE-EMLGLARSLKTNTLAAQSVIKKDNQTLSHSLKMAD 209
Query: 407 QDLDEADKDRDLEPAKVSLEPNQILTGIGIIVCF 508
Q+L++ + + N +L + IIVCF
Sbjct: 210 QNLEKLKTESERLEQHTQKSVNWLLWAMLIIVCF 243
>AK055096-1|BAB70854.1| 155|Homo sapiens protein ( Homo sapiens
cDNA FLJ30534 fis, clone BRAWH2001141. ).
Length = 155
Score = 26.6 bits (56), Expect(2) = 4.1
Identities = 14/26 (53%), Positives = 14/26 (53%)
Frame = -3
Query: 464 PATPWPVPGRGPCQPRRDLGARLRGP 387
PAT PGRGP DLGA GP
Sbjct: 80 PATRLATPGRGPGGRGWDLGALRVGP 105
Score = 23.0 bits (47), Expect(2) = 4.1
Identities = 11/25 (44%), Positives = 17/25 (68%)
Frame = -3
Query: 593 RIPKSNFPSPG*ILTSQLTLPRMLP 519
R+P+ P+PG + +SQL R+LP
Sbjct: 18 RVPRPP-PTPGGVPSSQLRPERLLP 41
>AB209299-1|BAD92536.1| 954|Homo sapiens aldehyde dehydrogenase 1
family, member L1 variant protein.
Length = 954
Score = 30.7 bits (66), Expect = 4.8
Identities = 13/30 (43%), Positives = 16/30 (53%)
Frame = -3
Query: 467 VPATPWPVPGRGPCQPRRDLGARLRGPSLF 378
+P TP P P RGP P + + G SLF
Sbjct: 34 LPGTPAPTPARGPSNPPATMKIAVIGQSLF 63
>BC009449-1|AAH09449.1| 569|Homo sapiens MGC2641 protein protein.
Length = 569
Score = 30.3 bits (65), Expect = 6.4
Identities = 15/47 (31%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
Frame = +2
Query: 50 DDKQSPEDGRVQG-HDGAADGPERERPVHHRGGRDRQPGRHHGGDED 187
D ++ P G + HD +GP+ +RP R R+R G DE+
Sbjct: 522 DSEEGPRCGSSEDLHDSVREGPDLDRPGSDRQERERARGDSEALDEE 568
>AY358600-1|AAQ88963.1| 671|Homo sapiens HGDF-related pro 2
protein.
Length = 671
Score = 30.3 bits (65), Expect = 6.4
Identities = 15/47 (31%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
Frame = +2
Query: 50 DDKQSPEDGRVQG-HDGAADGPERERPVHHRGGRDRQPGRHHGGDED 187
D ++ P G + HD +GP+ +RP R R+R G DE+
Sbjct: 624 DSEEGPRCGSSEDLHDSVREGPDLDRPGSDRQERERARGDSEALDEE 670
>AF294267-1|AAP97281.1| 671|Homo sapiens hepatoma-derived growth
factor 2 protein.
Length = 671
Score = 30.3 bits (65), Expect = 6.4
Identities = 15/47 (31%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
Frame = +2
Query: 50 DDKQSPEDGRVQG-HDGAADGPERERPVHHRGGRDRQPGRHHGGDED 187
D ++ P G + HD +GP+ +RP R R+R G DE+
Sbjct: 624 DSEEGPRCGSSEDLHDSVREGPDLDRPGSDRQERERARGDSEALDEE 670
>X98801-1|CAA67333.1| 1263|Homo sapiens dynactin protein.
Length = 1263
Score = 29.9 bits (64), Expect = 8.4
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = -2
Query: 405 CTTERAFAISASDLALDCEAVTINRLRSFI 316
CT + A I + ALDC +V + RLR+F+
Sbjct: 727 CTMQLADHIKFTQSALDCMSVEVGRLRAFL 756
>U90445-1|AAD00701.1| 405|Homo sapiens p150Glued homolog protein.
Length = 405
Score = 29.9 bits (64), Expect = 8.4
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = -2
Query: 405 CTTERAFAISASDLALDCEAVTINRLRSFI 316
CT + A I + ALDC +V + RLR+F+
Sbjct: 334 CTMQLADHIKFTQSALDCMSVEVGRLRAFL 363
>BC071583-1|AAH71583.1| 1139|Homo sapiens DCTN1 protein protein.
Length = 1139
Score = 29.9 bits (64), Expect = 8.4
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = -2
Query: 405 CTTERAFAISASDLALDCEAVTINRLRSFI 316
CT + A I + ALDC +V + RLR+F+
Sbjct: 608 CTMQLADHIKFTQSALDCMSVEVGRLRAFL 637
>BC026916-1|AAH26916.1| 408|Homo sapiens SERPINE1 mRNA binding
protein 1 protein.
Length = 408
Score = 29.9 bits (64), Expect = 8.4
Identities = 19/72 (26%), Positives = 32/72 (44%)
Frame = +2
Query: 59 QSPEDGRVQGHDGAADGPERERPVHHRGGRDRQPGRHHGGDEDRVRLPGTTSPKFEVDAG 238
+ P + + +G + + D P +RP+ RGG R G G +F+ +G
Sbjct: 139 EKPLEEKGEGGEFSVDRPIIDRPIRGRGGLGRGRGGRGRGMGRGDGFDSRGKREFDRHSG 198
Query: 239 EYKSSFSKQTSL 274
+SSFS + L
Sbjct: 199 SDRSSFSHYSGL 210
>BC019273-1|AAH19273.1| 408|Homo sapiens SERPINE1 mRNA binding
protein 1 protein.
Length = 408
Score = 29.9 bits (64), Expect = 8.4
Identities = 19/72 (26%), Positives = 32/72 (44%)
Frame = +2
Query: 59 QSPEDGRVQGHDGAADGPERERPVHHRGGRDRQPGRHHGGDEDRVRLPGTTSPKFEVDAG 238
+ P + + +G + + D P +RP+ RGG R G G +F+ +G
Sbjct: 139 EKPLEEKGEGGEFSVDRPIIDRPIRGRGGLGRGRGGRGRGMGRGDGFDSRGKREFDRHSG 198
Query: 239 EYKSSFSKQTSL 274
+SSFS + L
Sbjct: 199 SDRSSFSHYSGL 210
>BC011993-1|AAH11993.1| 380|Homo sapiens hypothetical protein
LOC79714 protein.
Length = 380
Score = 29.9 bits (64), Expect = 8.4
Identities = 9/30 (30%), Positives = 21/30 (70%)
Frame = +3
Query: 6 IVASIFGTVLGIAGSTINNHLKMAEFRDMM 95
++ S+ G ++G+AGST N +++ E + ++
Sbjct: 174 LIGSVLGALIGVAGSTYVNRVRLQELKALL 203
>BC008045-1|AAH08045.1| 408|Homo sapiens SERPINE1 mRNA binding
protein 1 protein.
Length = 408
Score = 29.9 bits (64), Expect = 8.4
Identities = 19/72 (26%), Positives = 32/72 (44%)
Frame = +2
Query: 59 QSPEDGRVQGHDGAADGPERERPVHHRGGRDRQPGRHHGGDEDRVRLPGTTSPKFEVDAG 238
+ P + + +G + + D P +RP+ RGG R G G +F+ +G
Sbjct: 139 EKPLEEKGEGGEFSVDRPIIDRPIRGRGGLGRGRGGRGRGMGRGDGFDSRGKREFDRHSG 198
Query: 239 EYKSSFSKQTSL 274
+SSFS + L
Sbjct: 199 SDRSSFSHYSGL 210
>BC003049-1|AAH03049.1| 408|Homo sapiens SERPINE1 mRNA binding
protein 1 protein.
Length = 408
Score = 29.9 bits (64), Expect = 8.4
Identities = 19/72 (26%), Positives = 32/72 (44%)
Frame = +2
Query: 59 QSPEDGRVQGHDGAADGPERERPVHHRGGRDRQPGRHHGGDEDRVRLPGTTSPKFEVDAG 238
+ P + + +G + + D P +RP+ RGG R G G +F+ +G
Sbjct: 139 EKPLEEKGEGGEFSVDRPIIDRPIRGRGGLGRGRGGRGRGMGRGDGFDSRGKREFDRHSG 198
Query: 239 EYKSSFSKQTSL 274
+SSFS + L
Sbjct: 199 SDRSSFSHYSGL 210
>AY032853-1|AAK51130.1| 309|Homo sapiens CGI-55 protein.
Length = 309
Score = 29.9 bits (64), Expect = 8.4
Identities = 19/72 (26%), Positives = 32/72 (44%)
Frame = +2
Query: 59 QSPEDGRVQGHDGAADGPERERPVHHRGGRDRQPGRHHGGDEDRVRLPGTTSPKFEVDAG 238
+ P + + +G + + D P +RP+ RGG R G G +F+ +G
Sbjct: 55 EKPLEEKGEGGEFSVDRPIIDRPIRGRGGLGRGRGGRGRGMGRGDGFDSRGKREFDRHSG 114
Query: 239 EYKSSFSKQTSL 274
+SSFS + L
Sbjct: 115 SDRSSFSHYSGL 126
>AL590559-3|CAH73323.1| 408|Homo sapiens PAI-1 mRNA-binding protein
(PAI-RBP1) protein.
Length = 408
Score = 29.9 bits (64), Expect = 8.4
Identities = 19/72 (26%), Positives = 32/72 (44%)
Frame = +2
Query: 59 QSPEDGRVQGHDGAADGPERERPVHHRGGRDRQPGRHHGGDEDRVRLPGTTSPKFEVDAG 238
+ P + + +G + + D P +RP+ RGG R G G +F+ +G
Sbjct: 139 EKPLEEKGEGGEFSVDRPIIDRPIRGRGGLGRGRGGRGRGMGRGDGFDSRGKREFDRHSG 198
Query: 239 EYKSSFSKQTSL 274
+SSFS + L
Sbjct: 199 SDRSSFSHYSGL 210
>AL590559-1|CAH73326.1| 393|Homo sapiens PAI-1 mRNA-binding protein
(PAI-RBP1) protein.
Length = 393
Score = 29.9 bits (64), Expect = 8.4
Identities = 19/72 (26%), Positives = 32/72 (44%)
Frame = +2
Query: 59 QSPEDGRVQGHDGAADGPERERPVHHRGGRDRQPGRHHGGDEDRVRLPGTTSPKFEVDAG 238
+ P + + +G + + D P +RP+ RGG R G G +F+ +G
Sbjct: 139 EKPLEEKGEGGEFSVDRPIIDRPIRGRGGLGRGRGGRGRGMGRGDGFDSRGKREFDRHSG 198
Query: 239 EYKSSFSKQTSL 274
+SSFS + L
Sbjct: 199 SDRSSFSHYSGL 210
>AK128697-1|BAC87576.1| 211|Homo sapiens protein ( Homo sapiens
cDNA FLJ46864 fis, clone UTERU3011579. ).
Length = 211
Score = 29.9 bits (64), Expect = 8.4
Identities = 15/32 (46%), Positives = 19/32 (59%)
Frame = -3
Query: 479 GFDLVPATPWPVPGRGPCQPRRDLGARLRGPS 384
G ++ + WP+P G C DLGARL GPS
Sbjct: 141 GLEVSASAAWPLPAPGDCS---DLGARL-GPS 168
>AK074970-1|BAC11324.1| 408|Homo sapiens protein ( Homo sapiens
cDNA FLJ90489 fis, clone NT2RP3003473, moderately
similar to PAI-1 mRNA-binding protein. ).
Length = 408
Score = 29.9 bits (64), Expect = 8.4
Identities = 19/72 (26%), Positives = 32/72 (44%)
Frame = +2
Query: 59 QSPEDGRVQGHDGAADGPERERPVHHRGGRDRQPGRHHGGDEDRVRLPGTTSPKFEVDAG 238
+ P + + +G + + D P +RP+ RGG R G G +F+ +G
Sbjct: 139 EKPLEEKGEGGEFSVDRPIIDRPIRGRGGLGRGRGGRGRGMGRGDGFDSRGKREFDRHSG 198
Query: 239 EYKSSFSKQTSL 274
+SSFS + L
Sbjct: 199 SDRSSFSHYSGL 210
>AK022498-1|BAB14060.1| 302|Homo sapiens protein ( Homo sapiens
cDNA FLJ12436 fis, clone NT2RM1000062. ).
Length = 302
Score = 29.9 bits (64), Expect = 8.4
Identities = 9/30 (30%), Positives = 21/30 (70%)
Frame = +3
Query: 6 IVASIFGTVLGIAGSTINNHLKMAEFRDMM 95
++ S+ G ++G+AGST N +++ E + ++
Sbjct: 96 LIGSVLGALIGVAGSTYVNRVRLQELKALL 125
>AF151813-1|AAD34050.1| 393|Homo sapiens CGI-55 protein protein.
Length = 393
Score = 29.9 bits (64), Expect = 8.4
Identities = 19/72 (26%), Positives = 32/72 (44%)
Frame = +2
Query: 59 QSPEDGRVQGHDGAADGPERERPVHHRGGRDRQPGRHHGGDEDRVRLPGTTSPKFEVDAG 238
+ P + + +G + + D P +RP+ RGG R G G +F+ +G
Sbjct: 139 EKPLEEKGEGGEFSVDRPIIDRPIRGRGGLGRGRGGRGRGMGRGDGFDSRGKREFDRHSG 198
Query: 239 EYKSSFSKQTSL 274
+SSFS + L
Sbjct: 199 SDRSSFSHYSGL 210
>AF086947-1|AAD03694.1| 1261|Homo sapiens dynactin 1 protein.
Length = 1261
Score = 29.9 bits (64), Expect = 8.4
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = -2
Query: 405 CTTERAFAISASDLALDCEAVTINRLRSFI 316
CT + A I + ALDC +V + RLR+F+
Sbjct: 725 CTMQLADHIKFTQSALDCMSVEVGRLRAFL 754
>AF064205-2|AAD55812.1| 1144|Homo sapiens dynactin 1 p135 isoform
protein.
Length = 1144
Score = 29.9 bits (64), Expect = 8.4
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = -2
Query: 405 CTTERAFAISASDLALDCEAVTINRLRSFI 316
CT + A I + ALDC +V + RLR+F+
Sbjct: 608 CTMQLADHIKFTQSALDCMSVEVGRLRAFL 637
>AF064205-1|AAD55811.1| 1278|Homo sapiens dynactin 1 p150 isoform
protein.
Length = 1278
Score = 29.9 bits (64), Expect = 8.4
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = -2
Query: 405 CTTERAFAISASDLALDCEAVTINRLRSFI 316
CT + A I + ALDC +V + RLR+F+
Sbjct: 742 CTMQLADHIKFTQSALDCMSVEVGRLRAFL 771
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 93,127,579
Number of Sequences: 237096
Number of extensions: 2175096
Number of successful extensions: 7669
Number of sequences better than 10.0: 48
Number of HSP's better than 10.0 without gapping: 6930
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7649
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7422585720
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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