Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV120007.Seq
(661 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF039047-10|AAB94229.2| 400|Caenorhabditis elegans Hypothetical... 36 0.034
Z66567-9|CAA91495.1| 1268|Caenorhabditis elegans Hypothetical pr... 34 0.078
Z66562-7|CAA91467.1| 1268|Caenorhabditis elegans Hypothetical pr... 34 0.078
X65055-1|CAA46191.1| 1254|Caenorhabditis elegans P-glycoprotein ... 34 0.078
Z49887-1|CAA90058.1| 710|Caenorhabditis elegans Hypothetical pr... 31 0.72
U97002-4|AAB52267.1| 630|Caenorhabditis elegans Hypothetical pr... 30 1.7
AL021483-1|CAA16348.1| 272|Caenorhabditis elegans Hypothetical ... 30 1.7
U39647-1|AAA80375.2| 351|Caenorhabditis elegans Hypothetical pr... 29 2.9
AL110485-18|CAB60366.1| 108|Caenorhabditis elegans Hypothetical... 29 3.9
AC024876-2|AAF60894.2| 186|Caenorhabditis elegans Hypothetical ... 29 3.9
AF125964-1|AAD14753.1| 471|Caenorhabditis elegans Hypothetical ... 28 5.1
Z70686-2|CAA94610.1| 570|Caenorhabditis elegans Hypothetical pr... 28 6.8
U20142-2|AAB60235.1| 570|Caenorhabditis elegans SPE-26 protein ... 28 6.8
AY130758-3|AAN61519.1| 10578|Caenorhabditis elegans 1MDa_1 prote... 28 6.8
AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 prote... 28 6.8
AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 prote... 28 6.8
AF040642-4|AAN73873.2| 319|Caenorhabditis elegans Hypothetical ... 28 6.8
Z82270-3|CAB63205.1| 667|Caenorhabditis elegans Hypothetical pr... 27 8.9
>AF039047-10|AAB94229.2| 400|Caenorhabditis elegans Hypothetical
protein K11D12.9 protein.
Length = 400
Score = 35.5 bits (78), Expect = 0.034
Identities = 22/82 (26%), Positives = 39/82 (47%)
Frame = +2
Query: 185 DRVRLPGTTSPKFEVDAGEYKSSFSKQTSLIEHMHNQEHLVETQMKDLKRLIVTASQSSA 364
D VRL T + E D E S F+ + I H+ N++ +++++LKRL+ + Q
Sbjct: 112 DIVRLLATLEREKERDRKEVDSQFTILKNRINHLENEKEQCLSEVQELKRLLEDSEQDLK 171
Query: 365 KSDAEIAKALSVVHQDLDEADK 430
E+ + + + D DK
Sbjct: 172 DCKDEMNRLMEERVETADALDK 193
>Z66567-9|CAA91495.1| 1268|Caenorhabditis elegans Hypothetical
protein ZK455.7 protein.
Length = 1268
Score = 34.3 bits (75), Expect = 0.078
Identities = 22/69 (31%), Positives = 38/69 (55%)
Frame = +3
Query: 18 IFGTVLGIAGSTINNHLKMAEFRDMMEQQMARSASVLYTIAGGGTASRADITEAMKTEFA 197
I G++LG AG T++ L+M FR++M+Q + + + G SR T+A + A
Sbjct: 767 ISGSLLGKAGETMSGRLRMDVFRNIMQQDASYFDDSRHNV--GSLTSRL-ATDAPNVQAA 823
Query: 198 YQEQLAQNL 224
++LA+ L
Sbjct: 824 IDQRLAEVL 832
>Z66562-7|CAA91467.1| 1268|Caenorhabditis elegans Hypothetical
protein ZK455.7 protein.
Length = 1268
Score = 34.3 bits (75), Expect = 0.078
Identities = 22/69 (31%), Positives = 38/69 (55%)
Frame = +3
Query: 18 IFGTVLGIAGSTINNHLKMAEFRDMMEQQMARSASVLYTIAGGGTASRADITEAMKTEFA 197
I G++LG AG T++ L+M FR++M+Q + + + G SR T+A + A
Sbjct: 767 ISGSLLGKAGETMSGRLRMDVFRNIMQQDASYFDDSRHNV--GSLTSRL-ATDAPNVQAA 823
Query: 198 YQEQLAQNL 224
++LA+ L
Sbjct: 824 IDQRLAEVL 832
>X65055-1|CAA46191.1| 1254|Caenorhabditis elegans P-glycoprotein C
protein.
Length = 1254
Score = 34.3 bits (75), Expect = 0.078
Identities = 22/69 (31%), Positives = 38/69 (55%)
Frame = +3
Query: 18 IFGTVLGIAGSTINNHLKMAEFRDMMEQQMARSASVLYTIAGGGTASRADITEAMKTEFA 197
I G++LG AG T++ L+M FR++M+Q + + + G SR T+A + A
Sbjct: 753 ISGSLLGKAGETMSGRLRMDVFRNIMQQDASYFDDSRHNV--GSLTSRL-ATDAPNVQAA 809
Query: 198 YQEQLAQNL 224
++LA+ L
Sbjct: 810 IDQRLAEVL 818
>Z49887-1|CAA90058.1| 710|Caenorhabditis elegans Hypothetical
protein F09B9.1 protein.
Length = 710
Score = 31.1 bits (67), Expect = 0.72
Identities = 19/48 (39%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
Frame = -2
Query: 339 INRLRSFI*VSTKCS*LCMCSIREVCLLKDDLYSPASTSNFG-LVVPG 199
I L F VS C CS++E+ +LK +LY+ +FG L VPG
Sbjct: 46 IKSLELFAGVSEACLKKQTCSLKELKILKANLYAIQELDSFGKLPVPG 93
>U97002-4|AAB52267.1| 630|Caenorhabditis elegans Hypothetical
protein K09H11.4 protein.
Length = 630
Score = 29.9 bits (64), Expect = 1.7
Identities = 18/58 (31%), Positives = 29/58 (50%), Gaps = 6/58 (10%)
Frame = +2
Query: 35 RYSRFDDKQSPEDGRVQGHDGAADG------PERERPVHHRGGRDRQPGRHHGGDEDR 190
R RF DK S ++ + + G+ G PE+ R H+ RDR+P R G+ ++
Sbjct: 279 RGGRFVDKPSEKEEQEKFFRGSDAGGGEDREPEKGRKQEHKESRDRRPARGDSGEVEK 336
Score = 29.1 bits (62), Expect = 2.9
Identities = 24/66 (36%), Positives = 31/66 (46%), Gaps = 9/66 (13%)
Frame = +2
Query: 20 FWHGARYSRFDDKQSPEDGRVQGHDGAADG-PER--ERPVHHRG------GRDRQPGRHH 172
F+ G+ +D++ PE GR Q H + D P R V RG GRD Q R H
Sbjct: 296 FFRGSDAGGGEDRE-PEKGRKQEHKESRDRRPARGDSGEVEKRGRGEKAEGRDEQERRSH 354
Query: 173 GGDEDR 190
G +E R
Sbjct: 355 GSEERR 360
>AL021483-1|CAA16348.1| 272|Caenorhabditis elegans Hypothetical
protein Y38H8A.1 protein.
Length = 272
Score = 29.9 bits (64), Expect = 1.7
Identities = 29/131 (22%), Positives = 53/131 (40%), Gaps = 4/131 (3%)
Frame = +2
Query: 224 EVDAGEYKSSFSKQTSLIE---HMHNQEHLVETQMKDLKRLIVTASQSSAKSDAEIAKAL 394
+ D KS ++TS E ++HN L E + + + K+ AE+ K +
Sbjct: 117 KTDTRSEKSKIEEKTSRDEGSNNVHNDRDLFEALQVEKPDICGSCPPIWMKNTAEM-KDI 175
Query: 395 SVVHQDLDEA-DKDRDLEPAKVSLEPNQILTGIGIIVCFR*YSATFWAESVEMSIFSPDS 571
H+ + D A+ ++ + + IVC + W ES + +P +
Sbjct: 176 CSNHESVSAFFSMTMDRRDAQNVVDSSDVKECTRTIVCSEPHMLVKWHESELCDVHAPST 235
Query: 572 GSLILESGHIF 604
GSLI + + F
Sbjct: 236 GSLISDISNTF 246
>U39647-1|AAA80375.2| 351|Caenorhabditis elegans Hypothetical
protein C44E12.1 protein.
Length = 351
Score = 29.1 bits (62), Expect = 2.9
Identities = 15/50 (30%), Positives = 29/50 (58%)
Frame = +2
Query: 338 IVTASQSSAKSDAEIAKALSVVHQDLDEADKDRDLEPAKVSLEPNQILTG 487
+VTA+ +K+D ++A+AL ++ +E D +E K+ + P +L G
Sbjct: 108 MVTAATIISKTDEDVARALGLLFVVGEEFDHIGMIEANKLEILPEYLLVG 157
>AL110485-18|CAB60366.1| 108|Caenorhabditis elegans Hypothetical
protein Y46G5A.23 protein.
Length = 108
Score = 28.7 bits (61), Expect = 3.9
Identities = 17/49 (34%), Positives = 20/49 (40%)
Frame = +2
Query: 74 GRVQGHDGAADGPERERPVHHRGGRDRQPGRHHGGDEDRVRLPGTTSPK 220
G+V G G G R H GG R G H GG R + G P+
Sbjct: 61 GQVLGGGGGGGGRRHHRGHRHGGGGHRHGG-HRGGGGGRGMVIGAERPQ 108
>AC024876-2|AAF60894.2| 186|Caenorhabditis elegans Hypothetical
protein Y94H6A.3 protein.
Length = 186
Score = 28.7 bits (61), Expect = 3.9
Identities = 20/69 (28%), Positives = 30/69 (43%), Gaps = 7/69 (10%)
Frame = +2
Query: 131 HHRGGRDRQPGRH-----HGGDEDRVR--LPGTTSPKFEVDAGEYKSSFSKQTSLIEHMH 289
+ R RDR RH H D R++ + T + DA S FS++ +E +
Sbjct: 8 YDRDRRDRDRDRHRSNKDHSSDVARMKEKMRSTLESARKSDAPSTSSDFSRKPQKVEELT 67
Query: 290 NQEHLVETQ 316
EHL T+
Sbjct: 68 PAEHLARTR 76
>AF125964-1|AAD14753.1| 471|Caenorhabditis elegans Hypothetical
protein W03G1.5 protein.
Length = 471
Score = 28.3 bits (60), Expect = 5.1
Identities = 18/79 (22%), Positives = 29/79 (36%), Gaps = 1/79 (1%)
Frame = +2
Query: 50 DDKQSPEDGRVQGHDGAADGPERERPVHHRGGRDRQPGRHHGGDEDRVRLPGT-TSPKFE 226
D+ + G G ++ G R RGGR + G R PG P+ +
Sbjct: 147 DENDRKKKGERSGSSSSSSGSSRSPSRGRRGGRGGRSGSSSSSSSSESRSPGRHEEPEKQ 206
Query: 227 VDAGEYKSSFSKQTSLIEH 283
E K +++ +EH
Sbjct: 207 GKKEELKQLKKQKSEGVEH 225
>Z70686-2|CAA94610.1| 570|Caenorhabditis elegans Hypothetical
protein R10H10.2 protein.
Length = 570
Score = 27.9 bits (59), Expect = 6.8
Identities = 18/61 (29%), Positives = 33/61 (54%)
Frame = +2
Query: 260 KQTSLIEHMHNQEHLVETQMKDLKRLIVTASQSSAKSDAEIAKALSVVHQDLDEADKDRD 439
++T +IE + NQ + + +D R ++ ++ D +IAK+LS H L A + RD
Sbjct: 185 QETQIIEVI-NQWIAADFENRDKFRPMLMSTVRFLALDQQIAKSLSQFHPSLKPARRTRD 243
Query: 440 L 442
+
Sbjct: 244 V 244
>U20142-2|AAB60235.1| 570|Caenorhabditis elegans SPE-26 protein
protein.
Length = 570
Score = 27.9 bits (59), Expect = 6.8
Identities = 18/61 (29%), Positives = 33/61 (54%)
Frame = +2
Query: 260 KQTSLIEHMHNQEHLVETQMKDLKRLIVTASQSSAKSDAEIAKALSVVHQDLDEADKDRD 439
++T +IE + NQ + + +D R ++ ++ D +IAK+LS H L A + RD
Sbjct: 185 QETQIIEVI-NQWIAADFENRDKFRPMLMSTVRFLALDQQIAKSLSQFHPSLKPARRTRD 243
Query: 440 L 442
+
Sbjct: 244 V 244
>AY130758-3|AAN61519.1| 10578|Caenorhabditis elegans 1MDa_1 protein
protein.
Length = 10578
Score = 27.9 bits (59), Expect = 6.8
Identities = 29/124 (23%), Positives = 51/124 (41%), Gaps = 5/124 (4%)
Frame = +2
Query: 113 ERERPVHHRGGRDRQPGRHHGGDEDRVRLPGTTSPKFEVDAGEYKSSFSKQTSLIEHMHN 292
E+ PV + + QP + V++P T+SP E + SK+TS +E
Sbjct: 5927 EKLAPVESKETSEVQPAEIV--EHKDVQVPETSSPTVEPTVEKLAPVESKETSEVEPAEI 5984
Query: 293 QEH----LVETQMKDLKRLIVTASQSSAKSDAEIAKALSVVHQDLDEADKDR-DLEPAKV 457
E + ET ++ + + +K +E+ A V H+D+ + +EP
Sbjct: 5985 VEQKDVPVPETSAPTVEPTVEKLAPVESKETSEVQPAEIVEHKDVQVPETSAPTVEPTIE 6044
Query: 458 SLEP 469
L P
Sbjct: 6045 KLAP 6048
Score = 27.5 bits (58), Expect = 8.9
Identities = 23/102 (22%), Positives = 43/102 (42%), Gaps = 1/102 (0%)
Frame = +2
Query: 179 DEDRVRLPGTTSPKFEVDAGEYKSSFSKQTSLIEHMHNQEHLVETQMKDLKRLIVTASQS 358
++ V +P T++P E + SK+TS +E E T +++K L+
Sbjct: 5338 EQKDVPVPETSAPTVEPTVEKLAPVDSKETSEVEPAEIVEQKDVTCEEEIKELLTEVEVE 5397
Query: 359 SAKSDAEIAKALSVVHQDLDEADKDRDLEPAKVS-LEPNQIL 481
S AE+ + +K +E + S +EP +I+
Sbjct: 5398 LLFSQAEVFSGSTAAPAQEPTVEKLAPVESKETSEVEPAEIV 5439
>AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 protein
protein.
Length = 18519
Score = 27.9 bits (59), Expect = 6.8
Identities = 29/124 (23%), Positives = 51/124 (41%), Gaps = 5/124 (4%)
Frame = +2
Query: 113 ERERPVHHRGGRDRQPGRHHGGDEDRVRLPGTTSPKFEVDAGEYKSSFSKQTSLIEHMHN 292
E+ PV + + QP + V++P T+SP E + SK+TS +E
Sbjct: 5947 EKLAPVESKETSEVQPAEIV--EHKDVQVPETSSPTVEPTVEKLAPVESKETSEVEPAEI 6004
Query: 293 QEH----LVETQMKDLKRLIVTASQSSAKSDAEIAKALSVVHQDLDEADKDR-DLEPAKV 457
E + ET ++ + + +K +E+ A V H+D+ + +EP
Sbjct: 6005 VEQKDVPVPETSAPTVEPTVEKLAPVESKETSEVQPAEIVEHKDVQVPETSAPTVEPTIE 6064
Query: 458 SLEP 469
L P
Sbjct: 6065 KLAP 6068
>AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 protein
protein.
Length = 18534
Score = 27.9 bits (59), Expect = 6.8
Identities = 29/124 (23%), Positives = 51/124 (41%), Gaps = 5/124 (4%)
Frame = +2
Query: 113 ERERPVHHRGGRDRQPGRHHGGDEDRVRLPGTTSPKFEVDAGEYKSSFSKQTSLIEHMHN 292
E+ PV + + QP + V++P T+SP E + SK+TS +E
Sbjct: 5947 EKLAPVESKETSEVQPAEIV--EHKDVQVPETSSPTVEPTVEKLAPVESKETSEVEPAEI 6004
Query: 293 QEH----LVETQMKDLKRLIVTASQSSAKSDAEIAKALSVVHQDLDEADKDR-DLEPAKV 457
E + ET ++ + + +K +E+ A V H+D+ + +EP
Sbjct: 6005 VEQKDVPVPETSAPTVEPTVEKLAPVESKETSEVQPAEIVEHKDVQVPETSAPTVEPTIE 6064
Query: 458 SLEP 469
L P
Sbjct: 6065 KLAP 6068
>AF040642-4|AAN73873.2| 319|Caenorhabditis elegans Hypothetical
protein C50D2.8 protein.
Length = 319
Score = 27.9 bits (59), Expect = 6.8
Identities = 11/18 (61%), Positives = 12/18 (66%)
Frame = +2
Query: 137 RGGRDRQPGRHHGGDEDR 190
R RDR+ RHHG D DR
Sbjct: 294 RDSRDRREHRHHGYDRDR 311
>Z82270-3|CAB63205.1| 667|Caenorhabditis elegans Hypothetical
protein F53H2.3 protein.
Length = 667
Score = 27.5 bits (58), Expect = 8.9
Identities = 12/25 (48%), Positives = 18/25 (72%)
Frame = -2
Query: 591 DSKIKLPESGLNIDISTDSAQNVAE 517
DS +K+P+SGLN+D S + +AE
Sbjct: 612 DSTMKMPKSGLNLDESGGKLKFLAE 636
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,693,527
Number of Sequences: 27780
Number of extensions: 319873
Number of successful extensions: 1435
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 1231
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1431
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1476380920
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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