Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120004.Seq
         (720 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    26   0.35 
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      24   1.4  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      24   1.4  
AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxida...    23   1.9  
DQ855491-1|ABH88178.1|  144|Tribolium castaneum chemosensory pro...    22   5.8  
DQ855506-1|ABH88193.1|  124|Tribolium castaneum chemosensory pro...    21   7.6  
AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxida...    21   7.6  

>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 25.8 bits (54), Expect = 0.35
 Identities = 11/32 (34%), Positives = 18/32 (56%)
 Frame = +1

Query: 502 FHSGTQRVIHSVYATTRSILDTTNPNTFCSRV 597
           FH G+Q V+H+V    ++ + T +  TF   V
Sbjct: 380 FHIGSQLVLHTVKTVLKTTMSTFSDITFMRTV 411


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = -3

Query: 664 DRQHHLDAFGRWSRRKNAIR 605
           +RQ H+  +  WS R NA R
Sbjct: 535 ERQLHMQLYPDWSSRANATR 554


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = -3

Query: 664 DRQHHLDAFGRWSRRKNAIR 605
           +RQ H+  +  WS R NA R
Sbjct: 427 ERQLHMQLYPDWSSRANATR 446


>AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxidase
           subunit 2 protein.
          Length = 683

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 8/21 (38%), Positives = 11/21 (52%)
 Frame = +3

Query: 606 RIAFFRRDQRPNASRWCWRSI 668
           R+A+FR D   N   W W  +
Sbjct: 193 RLAYFREDLGINLHHWHWHLV 213


>DQ855491-1|ABH88178.1|  144|Tribolium castaneum chemosensory
           protein 5 protein.
          Length = 144

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 6/17 (35%), Positives = 12/17 (70%)
 Frame = +1

Query: 151 IVSFDACITYKSPCSPD 201
           ++++  C+  K PCSP+
Sbjct: 53  LLNYINCLLEKGPCSPE 69


>DQ855506-1|ABH88193.1|  124|Tribolium castaneum chemosensory
           protein 20 protein.
          Length = 124

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 6/11 (54%), Positives = 8/11 (72%)
 Frame = +1

Query: 169 CITYKSPCSPD 201
           C+  K PC+PD
Sbjct: 48  CLLEKKPCTPD 58


>AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxidase
           subunit 1 protein.
          Length = 682

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 7/21 (33%), Positives = 11/21 (52%)
 Frame = +3

Query: 606 RIAFFRRDQRPNASRWCWRSI 668
           R+A++R D   N   W W  +
Sbjct: 193 RVAYWREDIGLNLHHWHWHLV 213


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 164,800
Number of Sequences: 336
Number of extensions: 3484
Number of successful extensions: 13
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19155320
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)