Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060990.seq
         (686 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.        23   2.3  
AJ606487-1|CAE55183.1|  203|Tribolium castaneum Giant protein pr...    23   3.1  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    22   4.1  
AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory recept...    22   4.1  
AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    21   7.2  
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    21   7.2  

>DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.
          Length = 414

 Score = 23.0 bits (47), Expect = 2.3
 Identities = 17/43 (39%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
 Frame = +2

Query: 62  MTHFIALNPPQYISETDTSNLMPEGDFCVCCLSQN-VNFVNLN 187
           +TH IA NP    S   +SNLMP  +  +  LSQ+ +N+ + N
Sbjct: 338 LTHNIAHNPYPSHSIYPSSNLMPLNN--IQNLSQSGINYKDTN 378


>AJ606487-1|CAE55183.1|  203|Tribolium castaneum Giant protein
           protein.
          Length = 203

 Score = 22.6 bits (46), Expect = 3.1
 Identities = 10/24 (41%), Positives = 14/24 (58%)
 Frame = -1

Query: 206 IRCVYICLNLQNLRFVTDNTHKNL 135
           IRC ++     +L+FVTD   K L
Sbjct: 165 IRCAFLERENCHLKFVTDTLKKEL 188


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 8/14 (57%), Positives = 11/14 (78%)
 Frame = +1

Query: 268 HEILRKIELFKSQV 309
           HEI+ KIE+F  Q+
Sbjct: 675 HEIIDKIEMFSLQI 688



 Score = 22.2 bits (45), Expect = 4.1
 Identities = 7/22 (31%), Positives = 13/22 (59%)
 Frame = +2

Query: 182 LNRCKHIEFLNYFFKYKTEFQN 247
           +NRCK  EF+    ++  + Q+
Sbjct: 741 MNRCKFSEFMTKLLEFDVKLQS 762



 Score = 22.2 bits (45), Expect = 4.1
 Identities = 8/14 (57%), Positives = 11/14 (78%)
 Frame = +1

Query: 268 HEILRKIELFKSQV 309
           HEI+ KIE+F  Q+
Sbjct: 951 HEIIDKIEMFSLQI 964



 Score = 22.2 bits (45), Expect = 4.1
 Identities = 8/14 (57%), Positives = 11/14 (78%)
 Frame = +1

Query: 268  HEILRKIELFKSQV 309
            HEI+ KIE+F  Q+
Sbjct: 1053 HEIIDKIEMFSLQI 1066


>AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory receptor
           candidate 1 protein.
          Length = 373

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 8/14 (57%), Positives = 11/14 (78%)
 Frame = +1

Query: 268 HEILRKIELFKSQV 309
           HEI+ KIE+F  Q+
Sbjct: 334 HEIIDKIEMFSLQI 347


>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = -3

Query: 603 PSRNYRFRLSRLYRSV 556
           P R YRFR+   + SV
Sbjct: 340 PGRRYRFRMINSFASV 355


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = -3

Query: 603 PSRNYRFRLSRLYRSV 556
           P R YRFR+   + SV
Sbjct: 340 PGRRYRFRMINSFASV 355


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 161,593
Number of Sequences: 336
Number of extensions: 3661
Number of successful extensions: 15
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18010165
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)