Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060990.seq
(686 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC1039.03 |||esterase/lipase |Schizosaccharomyces pombe|chr 1|... 31 0.21
SPBC244.01c |sid4||SIN component scaffold protein Sid4 |Schizosa... 30 0.36
SPAC1565.07c |||TATA binding protein interacting protein |Schizo... 29 0.48
SPCC645.05c |myo2|rng5|myosin II heavy chain|Schizosaccharomyces... 28 1.5
SPAC29A4.16 |hal4|sat4, ppk10|halotolerence protein 4|Schizosacc... 27 2.5
SPBC21.05c |ral2||Ras guanyl-nucleotide exchange factor Ral2 |Sc... 27 2.5
SPBC16H5.07c |ppa2||serine/threonine protein phosphatase Ppa2|Sc... 27 3.4
SPAC2F3.14c |||conserved fungal protein|Schizosaccharomyces pomb... 26 4.4
SPAP11E10.02c |mam3|SPAPB1A10.01c|cell agglutination protein Mam... 26 5.9
SPAC4F8.13c |rng2||IQGAP|Schizosaccharomyces pombe|chr 1|||Manual 26 5.9
SPAC18B11.04 |ncs1||related to neuronal calcium sensor Ncs1|Schi... 25 7.8
SPBC15D4.03 |slm9||hira protein Slm9|Schizosaccharomyces pombe|c... 25 7.8
SPAC824.09c |||GTPase activating protein |Schizosaccharomyces po... 25 7.8
>SPAC1039.03 |||esterase/lipase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 341
Score = 30.7 bits (66), Expect = 0.21
Identities = 14/45 (31%), Positives = 25/45 (55%)
Frame = +1
Query: 373 CNNLTSSNVTSIEINFLSEDTSVKPGKNFVLIVEDTNNEFLEEKH 507
C+NL + ++FL + +V PG++ +L VE T + + KH
Sbjct: 33 CSNLPIVKTHTYPVDFLRNNGNVMPGQSELLPVESTEDITIPRKH 77
>SPBC244.01c |sid4||SIN component scaffold protein Sid4
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 660
Score = 29.9 bits (64), Expect = 0.36
Identities = 36/127 (28%), Positives = 62/127 (48%), Gaps = 7/127 (5%)
Frame = +1
Query: 271 EILRKIELFKSQVEESMQILNKQIFHTNENKIKKCNNLTSSNVTSIEI-------NFLSE 429
E LRK EL +Q + +QIL HT++N ++ N + + +T+ N +
Sbjct: 442 EHLRK-EL--TQARKEIQILR----HTSQNGDQESNESSKNAITTKTTDKGNNKENTMLN 494
Query: 430 DTSVKPGKNFVLIVEDTNNEFLEEKHLFRDEKRWWILKMVNHHRTIQT*KSKAIVPTWET 609
D S P KN + V +TNN L+ K DE M+ +++ T + + +PT+ T
Sbjct: 495 DGSTAPAKNDIRNVINTNN--LDAK--LSDESE----LMIEKNKSYST-PASSTIPTFHT 545
Query: 610 ALPLSQI 630
+ PL+ +
Sbjct: 546 SQPLTSL 552
>SPAC1565.07c |||TATA binding protein interacting protein
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1220
Score = 29.5 bits (63), Expect = 0.48
Identities = 14/37 (37%), Positives = 23/37 (62%)
Frame = -2
Query: 637 LLLSVTKVTQSPKSELSLSTFTSVSFGDDLPFSKSTI 527
++ S+ K SPKSE+ + FT++ FG L + K T+
Sbjct: 815 IVTSLNKSFMSPKSEVRIKVFTTLIFG-QLDYGKLTL 850
>SPCC645.05c |myo2|rng5|myosin II heavy chain|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1526
Score = 27.9 bits (59), Expect = 1.5
Identities = 14/49 (28%), Positives = 30/49 (61%)
Frame = +1
Query: 298 KSQVEESMQILNKQIFHTNENKIKKCNNLTSSNVTSIEINFLSEDTSVK 444
+++V+E + + K + ENK +KC NL+ +++ IE+ + E+ +K
Sbjct: 1116 EAKVKECLNNI-KSLTKELENKEEKCQNLSDASLKYIELQEIHENLLLK 1163
>SPAC29A4.16 |hal4|sat4, ppk10|halotolerence protein
4|Schizosaccharomyces pombe|chr 1|||Manual
Length = 636
Score = 27.1 bits (57), Expect = 2.5
Identities = 12/38 (31%), Positives = 23/38 (60%)
Frame = -2
Query: 628 SVTKVTQSPKSELSLSTFTSVSFGDDLPFSKSTIASRP 515
S+ V Q+P S ++++ ++VS P SK ++S+P
Sbjct: 64 SLNSVQQTPASIDAVASSSNVSLQSQQPLSKPVVSSKP 101
>SPBC21.05c |ral2||Ras guanyl-nucleotide exchange factor Ral2
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 611
Score = 27.1 bits (57), Expect = 2.5
Identities = 10/30 (33%), Positives = 18/30 (60%), Gaps = 1/30 (3%)
Frame = +1
Query: 472 EDTNNEFLEEKHLF-RDEKRWWILKMVNHH 558
+D +N ++EE ++F D +W + NHH
Sbjct: 182 QDLSNSYIEEINIFDLDSGKWVFKSLFNHH 211
>SPBC16H5.07c |ppa2||serine/threonine protein phosphatase
Ppa2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 322
Score = 26.6 bits (56), Expect = 3.4
Identities = 14/55 (25%), Positives = 30/55 (54%), Gaps = 3/55 (5%)
Frame = +1
Query: 361 KIKKCNNLTSSNVTSI---EINFLSEDTSVKPGKNFVLIVEDTNNEFLEEKHLFR 516
++KKC L+ ++V + L ++ +V+P +N V + D + +F + LF+
Sbjct: 29 QLKKCEPLSEADVEMLCDKAREVLCQENNVQPVRNPVTVCGDIHGQFHDLMELFK 83
>SPAC2F3.14c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 331
Score = 26.2 bits (55), Expect = 4.4
Identities = 12/51 (23%), Positives = 26/51 (50%)
Frame = +1
Query: 349 TNENKIKKCNNLTSSNVTSIEINFLSEDTSVKPGKNFVLIVEDTNNEFLEE 501
+N ++ +N+ S + S + + + S GK++ + ED +N F+ E
Sbjct: 11 SNVDQTIPASNVNSGDFISSNTSSSNSENSNIQGKHYTQVGEDADNSFISE 61
>SPAP11E10.02c |mam3|SPAPB1A10.01c|cell agglutination protein
Mam3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1082
Score = 25.8 bits (54), Expect = 5.9
Identities = 16/49 (32%), Positives = 24/49 (48%)
Frame = -2
Query: 667 IPPDSIFTFFLLLSVTKVTQSPKSELSLSTFTSVSFGDDLPFSKSTIAS 521
IPP + S TK + S+LS FTS S L +KS++++
Sbjct: 491 IPPVNSSLVTSSTSFTKFSSLSSSQLSTENFTSASSSLSLTNAKSSLST 539
>SPAC4F8.13c |rng2||IQGAP|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1489
Score = 25.8 bits (54), Expect = 5.9
Identities = 14/40 (35%), Positives = 25/40 (62%)
Frame = +1
Query: 451 KNFVLIVEDTNNEFLEEKHLFRDEKRWWILKMVNHHRTIQ 570
KNFV +++DTN +F EE + ++ R I++ V + I+
Sbjct: 720 KNFVHLLDDTNFDFEEE--VLLEKMRKEIVQQVRDNEEIE 757
>SPAC18B11.04 |ncs1||related to neuronal calcium sensor
Ncs1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 190
Score = 25.4 bits (53), Expect = 7.8
Identities = 12/22 (54%), Positives = 15/22 (68%)
Frame = +1
Query: 103 RNGYI*FNA*RRFLCVLSVTKR 168
+NGYI F + F+C LSVT R
Sbjct: 76 KNGYIDF---KEFICALSVTSR 94
>SPBC15D4.03 |slm9||hira protein Slm9|Schizosaccharomyces pombe|chr
2|||Manual
Length = 807
Score = 25.4 bits (53), Expect = 7.8
Identities = 11/44 (25%), Positives = 22/44 (50%)
Frame = +1
Query: 433 TSVKPGKNFVLIVEDTNNEFLEEKHLFRDEKRWWILKMVNHHRT 564
+S+ K+FV + +TN L + + I++ +N H+T
Sbjct: 15 SSISSSKDFVAVSAETNVYILSKDFFYPKSSEKRIIQSLNGHKT 58
>SPAC824.09c |||GTPase activating protein |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 320
Score = 25.4 bits (53), Expect = 7.8
Identities = 22/65 (33%), Positives = 33/65 (50%), Gaps = 2/65 (3%)
Frame = -2
Query: 682 PLTAHIPPDSIFTFFLLLSVTKVTQSPKSELSLSTFTSVSFGDDL--PFSKSTIASRPEI 509
P T H P S L S+ + SP+ ++S S+ T+ + +L P S ST +S+P
Sbjct: 202 PSTVHAP--STRQRDLKSSILSLYASPRPQVSSSSITTNATYQNLPSPVSTSTTSSQP-Y 258
Query: 508 GVFLQ 494
G F Q
Sbjct: 259 GAFHQ 263
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,799,981
Number of Sequences: 5004
Number of extensions: 59530
Number of successful extensions: 182
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 167
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 182
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 317927284
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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