Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060990.seq
(686 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X79537-1|CAA56073.1| 279|Homo sapiens glycogenin protein. 31 2.9
U44131-1|AAB00114.1| 333|Homo sapiens glycogenin protein. 31 2.9
U31525-1|AAB09752.1| 333|Homo sapiens glycogenin protein. 31 2.9
CR536547-1|CAG38784.1| 333|Homo sapiens GYG protein. 31 2.9
BC031096-1|AAH31096.2| 331|Homo sapiens GYG1 protein protein. 31 2.9
BC000033-1|AAH00033.1| 333|Homo sapiens GYG1 protein protein. 31 2.9
AF087942-1|AAD52093.1| 350|Homo sapiens glycogenin-1L protein. 31 2.9
AF065481-1|AAD31084.1| 333|Homo sapiens glycogenin-1 protein. 31 2.9
Z29074-1|CAA82315.1| 623|Homo sapiens cytokeratin 9 protein. 30 8.9
X75015-1|CAA52924.1| 622|Homo sapiens keratin 9 protein. 30 8.9
S69510-1|AAC60619.1| 622|Homo sapiens cytokeratin 9 protein. 30 8.9
BC150289-1|AAI50290.1| 1362|Homo sapiens Unknown (protein for IM... 30 8.9
BC121170-1|AAI21171.1| 467|Homo sapiens KRT9 protein protein. 30 8.9
AL357081-2|CAI41323.1| 1362|Homo sapiens spectrin repeat contain... 30 8.9
AF535142-1|AAN03486.1| 8749|Homo sapiens enaptin protein. 30 8.9
AF495910-1|AAN60442.1| 8797|Homo sapiens nesprin-1 protein. 30 8.9
AB033088-1|BAA86576.1| 1362|Homo sapiens KIAA1262 protein protein. 30 8.9
AB001594-1|BAA19418.1| 226|Homo sapiens mutant keratin 9 protein. 30 8.9
>X79537-1|CAA56073.1| 279|Homo sapiens glycogenin protein.
Length = 279
Score = 31.5 bits (68), Expect = 2.9
Identities = 21/66 (31%), Positives = 33/66 (50%), Gaps = 3/66 (4%)
Frame = -2
Query: 637 LLLSVTKVTQSPKSELSLSTFTSVSFGDDLPFSKS---TIASRPEIGVFLQEIHYWCLPQ 467
++L+ +V+ S + L + F V D L S T+ RPE+GV L ++H W L Q
Sbjct: 36 VVLATPQVSDSMRKVLE-TVFDEVIMVDVLDSGDSAHLTLMKRPELGVTLTKLHCWSLTQ 94
Query: 466 SIQSFF 449
+ F
Sbjct: 95 YSKCVF 100
>U44131-1|AAB00114.1| 333|Homo sapiens glycogenin protein.
Length = 333
Score = 31.5 bits (68), Expect = 2.9
Identities = 21/66 (31%), Positives = 33/66 (50%), Gaps = 3/66 (4%)
Frame = -2
Query: 637 LLLSVTKVTQSPKSELSLSTFTSVSFGDDLPFSKS---TIASRPEIGVFLQEIHYWCLPQ 467
++L+ +V+ S + L + F V D L S T+ RPE+GV L ++H W L Q
Sbjct: 36 VVLATPQVSDSMRKVLE-TVFDEVIMVDVLDSGDSAHLTLMKRPELGVTLTKLHCWSLTQ 94
Query: 466 SIQSFF 449
+ F
Sbjct: 95 YSKCVF 100
>U31525-1|AAB09752.1| 333|Homo sapiens glycogenin protein.
Length = 333
Score = 31.5 bits (68), Expect = 2.9
Identities = 21/66 (31%), Positives = 33/66 (50%), Gaps = 3/66 (4%)
Frame = -2
Query: 637 LLLSVTKVTQSPKSELSLSTFTSVSFGDDLPFSKS---TIASRPEIGVFLQEIHYWCLPQ 467
++L+ +V+ S + L + F V D L S T+ RPE+GV L ++H W L Q
Sbjct: 36 VVLATPQVSDSMRKVLE-TVFDEVIMVDVLDSGDSAHLTLMKRPELGVTLTKLHCWSLTQ 94
Query: 466 SIQSFF 449
+ F
Sbjct: 95 YSKCVF 100
>CR536547-1|CAG38784.1| 333|Homo sapiens GYG protein.
Length = 333
Score = 31.5 bits (68), Expect = 2.9
Identities = 21/66 (31%), Positives = 33/66 (50%), Gaps = 3/66 (4%)
Frame = -2
Query: 637 LLLSVTKVTQSPKSELSLSTFTSVSFGDDLPFSKS---TIASRPEIGVFLQEIHYWCLPQ 467
++L+ +V+ S + L + F V D L S T+ RPE+GV L ++H W L Q
Sbjct: 36 VVLATPQVSDSMRKVLE-TVFDEVIMVDVLDSGDSAHLTLMKRPELGVTLTKLHCWSLTQ 94
Query: 466 SIQSFF 449
+ F
Sbjct: 95 YSKCVF 100
>BC031096-1|AAH31096.2| 331|Homo sapiens GYG1 protein protein.
Length = 331
Score = 31.5 bits (68), Expect = 2.9
Identities = 21/66 (31%), Positives = 33/66 (50%), Gaps = 3/66 (4%)
Frame = -2
Query: 637 LLLSVTKVTQSPKSELSLSTFTSVSFGDDLPFSKS---TIASRPEIGVFLQEIHYWCLPQ 467
++L+ +V+ S + L + F V D L S T+ RPE+GV L ++H W L Q
Sbjct: 34 VVLATPQVSDSMRKVLE-TVFDEVIMVDVLDSGDSAHLTLMKRPELGVTLTKLHCWSLTQ 92
Query: 466 SIQSFF 449
+ F
Sbjct: 93 YSKCVF 98
>BC000033-1|AAH00033.1| 333|Homo sapiens GYG1 protein protein.
Length = 333
Score = 31.5 bits (68), Expect = 2.9
Identities = 21/66 (31%), Positives = 33/66 (50%), Gaps = 3/66 (4%)
Frame = -2
Query: 637 LLLSVTKVTQSPKSELSLSTFTSVSFGDDLPFSKS---TIASRPEIGVFLQEIHYWCLPQ 467
++L+ +V+ S + L + F V D L S T+ RPE+GV L ++H W L Q
Sbjct: 36 VVLATPQVSDSMRKVLE-TVFDEVIMVDVLDSGDSAHLTLMKRPELGVTLTKLHCWSLTQ 94
Query: 466 SIQSFF 449
+ F
Sbjct: 95 YSKCVF 100
>AF087942-1|AAD52093.1| 350|Homo sapiens glycogenin-1L protein.
Length = 350
Score = 31.5 bits (68), Expect = 2.9
Identities = 21/66 (31%), Positives = 33/66 (50%), Gaps = 3/66 (4%)
Frame = -2
Query: 637 LLLSVTKVTQSPKSELSLSTFTSVSFGDDLPFSKS---TIASRPEIGVFLQEIHYWCLPQ 467
++L+ +V+ S + L + F V D L S T+ RPE+GV L ++H W L Q
Sbjct: 36 VVLATPQVSDSMRKVLE-TVFDEVIMVDVLDSGDSAHLTLMKRPELGVTLTKLHCWSLTQ 94
Query: 466 SIQSFF 449
+ F
Sbjct: 95 YSKCVF 100
>AF065481-1|AAD31084.1| 333|Homo sapiens glycogenin-1 protein.
Length = 333
Score = 31.5 bits (68), Expect = 2.9
Identities = 21/66 (31%), Positives = 33/66 (50%), Gaps = 3/66 (4%)
Frame = -2
Query: 637 LLLSVTKVTQSPKSELSLSTFTSVSFGDDLPFSKS---TIASRPEIGVFLQEIHYWCLPQ 467
++L+ +V+ S + L + F V D L S T+ RPE+GV L ++H W L Q
Sbjct: 36 VVLATPQVSDSMRKVLE-TVFDEVIMVDVLDSGDSAHLTLMKRPELGVTLTKLHCWSLTQ 94
Query: 466 SIQSFF 449
+ F
Sbjct: 95 YSKCVF 100
>Z29074-1|CAA82315.1| 623|Homo sapiens cytokeratin 9 protein.
Length = 623
Score = 29.9 bits (64), Expect = 8.9
Identities = 15/74 (20%), Positives = 35/74 (47%)
Frame = +1
Query: 271 EILRKIELFKSQVEESMQILNKQIFHTNENKIKKCNNLTSSNVTSIEINFLSEDTSVKPG 450
++L + + KS +E + L +++ +N ++ + LT N + + + +V PG
Sbjct: 262 QVLDNLTMEKSDLEMQYETLQEELMALKKNHKEEMSQLTGQNSGDVNV-----EINVAPG 316
Query: 451 KNFVLIVEDTNNEF 492
K+ + D E+
Sbjct: 317 KDLTKTLNDMRQEY 330
>X75015-1|CAA52924.1| 622|Homo sapiens keratin 9 protein.
Length = 622
Score = 29.9 bits (64), Expect = 8.9
Identities = 15/74 (20%), Positives = 35/74 (47%)
Frame = +1
Query: 271 EILRKIELFKSQVEESMQILNKQIFHTNENKIKKCNNLTSSNVTSIEINFLSEDTSVKPG 450
++L + + KS +E + L +++ +N ++ + LT N + + + +V PG
Sbjct: 261 QVLDNLTMEKSDLEMQYETLQEELMALKKNHKEEMSQLTGQNSGDVNV-----EINVAPG 315
Query: 451 KNFVLIVEDTNNEF 492
K+ + D E+
Sbjct: 316 KDLTKTLNDMRQEY 329
>S69510-1|AAC60619.1| 622|Homo sapiens cytokeratin 9 protein.
Length = 622
Score = 29.9 bits (64), Expect = 8.9
Identities = 15/74 (20%), Positives = 35/74 (47%)
Frame = +1
Query: 271 EILRKIELFKSQVEESMQILNKQIFHTNENKIKKCNNLTSSNVTSIEINFLSEDTSVKPG 450
++L + + KS +E + L +++ +N ++ + LT N + + + +V PG
Sbjct: 261 QVLDNLTMEKSDLEMQYETLQEELMALKKNHKEEMSQLTGQNSGDVNV-----EINVAPG 315
Query: 451 KNFVLIVEDTNNEF 492
K+ + D E+
Sbjct: 316 KDLTKTLNDMRQEY 329
>BC150289-1|AAI50290.1| 1362|Homo sapiens Unknown (protein for
IMAGE:8860128) protein.
Length = 1362
Score = 29.9 bits (64), Expect = 8.9
Identities = 13/43 (30%), Positives = 27/43 (62%)
Frame = +1
Query: 271 EILRKIELFKSQVEESMQILNKQIFHTNENKIKKCNNLTSSNV 399
E +RKI++ + +V+ S++I+N + H + K K L S+++
Sbjct: 704 EEIRKIQIHQEEVQSSLRIMN-ALSHKEKEKFTKAKELISADL 745
>BC121170-1|AAI21171.1| 467|Homo sapiens KRT9 protein protein.
Length = 467
Score = 29.9 bits (64), Expect = 8.9
Identities = 15/74 (20%), Positives = 35/74 (47%)
Frame = +1
Query: 271 EILRKIELFKSQVEESMQILNKQIFHTNENKIKKCNNLTSSNVTSIEINFLSEDTSVKPG 450
++L + + KS +E + L +++ +N ++ + LT N + + + +V PG
Sbjct: 106 QVLDNLTMEKSDLEMQYETLQEELMALKKNHKEEMSQLTGQNSGDVNV-----EINVAPG 160
Query: 451 KNFVLIVEDTNNEF 492
K+ + D E+
Sbjct: 161 KDLTKTLNDMRQEY 174
>AL357081-2|CAI41323.1| 1362|Homo sapiens spectrin repeat
containing, nuclear envelope 1 protein.
Length = 1362
Score = 29.9 bits (64), Expect = 8.9
Identities = 13/43 (30%), Positives = 27/43 (62%)
Frame = +1
Query: 271 EILRKIELFKSQVEESMQILNKQIFHTNENKIKKCNNLTSSNV 399
E +RKI++ + +V+ S++I+N + H + K K L S+++
Sbjct: 704 EEIRKIQIHQEEVQSSLRIMN-ALSHKEKEKFTKAKELISADL 745
>AF535142-1|AAN03486.1| 8749|Homo sapiens enaptin protein.
Length = 8749
Score = 29.9 bits (64), Expect = 8.9
Identities = 13/43 (30%), Positives = 27/43 (62%)
Frame = +1
Query: 271 EILRKIELFKSQVEESMQILNKQIFHTNENKIKKCNNLTSSNV 399
E +RKI++ + +V+ S++I+N + H + K K L S+++
Sbjct: 4851 EEIRKIQIHQEEVQSSLRIMN-ALSHKEKEKFTKAKELISADL 4892
>AF495910-1|AAN60442.1| 8797|Homo sapiens nesprin-1 protein.
Length = 8797
Score = 29.9 bits (64), Expect = 8.9
Identities = 13/43 (30%), Positives = 27/43 (62%)
Frame = +1
Query: 271 EILRKIELFKSQVEESMQILNKQIFHTNENKIKKCNNLTSSNV 399
E +RKI++ + +V+ S++I+N + H + K K L S+++
Sbjct: 4922 EEIRKIQIHQEEVQSSLRIMN-ALSHKEKEKFTKAKELISADL 4963
>AB033088-1|BAA86576.1| 1362|Homo sapiens KIAA1262 protein protein.
Length = 1362
Score = 29.9 bits (64), Expect = 8.9
Identities = 13/43 (30%), Positives = 27/43 (62%)
Frame = +1
Query: 271 EILRKIELFKSQVEESMQILNKQIFHTNENKIKKCNNLTSSNV 399
E +RKI++ + +V+ S++I+N + H + K K L S+++
Sbjct: 704 EEIRKIQIHQEEVQSSLRIMN-ALSHKEKEKFTKAKELISADL 745
>AB001594-1|BAA19418.1| 226|Homo sapiens mutant keratin 9 protein.
Length = 226
Score = 29.9 bits (64), Expect = 8.9
Identities = 15/74 (20%), Positives = 35/74 (47%)
Frame = +1
Query: 271 EILRKIELFKSQVEESMQILNKQIFHTNENKIKKCNNLTSSNVTSIEINFLSEDTSVKPG 450
++L + + KS +E + L +++ +N ++ + LT N + + + +V PG
Sbjct: 116 QVLDNLTMEKSDLEMQYETLQEELMALKKNHKEEMSQLTGQNSGDVNV-----EINVAPG 170
Query: 451 KNFVLIVEDTNNEF 492
K+ + D E+
Sbjct: 171 KDLTKTLNDMRQEY 184
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 90,721,226
Number of Sequences: 237096
Number of extensions: 1797413
Number of successful extensions: 7238
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 7142
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7238
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7839245960
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -