Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060990.seq
         (686 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY069312-1|AAL39457.1|  283|Drosophila melanogaster LD02616p pro...    31   2.0  
AE014298-1933|AAF48295.2|  283|Drosophila melanogaster CG11176-P...    31   2.0  
BT016002-1|AAV36887.1|  686|Drosophila melanogaster RE40670p pro...    29   4.5  
AE014134-1834|AAF52910.2|  686|Drosophila melanogaster CG5381-PA...    29   4.5  

>AY069312-1|AAL39457.1|  283|Drosophila melanogaster LD02616p
           protein.
          Length = 283

 Score = 30.7 bits (66), Expect = 2.0
 Identities = 17/49 (34%), Positives = 23/49 (46%)
 Frame = +1

Query: 340 IFHTNENKIKKCNNLTSSNVTSIEINFLSEDTSVKPGKNFVLIVEDTNN 486
           I + NE  +K C   ++ N  SIEI   S+   VK   N    +ED  N
Sbjct: 107 ILNYNERLLKDCTKYSAFNFVSIEIGSASQPARVKLLSNVPPTLEDFQN 155


>AE014298-1933|AAF48295.2|  283|Drosophila melanogaster CG11176-PA
           protein.
          Length = 283

 Score = 30.7 bits (66), Expect = 2.0
 Identities = 17/49 (34%), Positives = 23/49 (46%)
 Frame = +1

Query: 340 IFHTNENKIKKCNNLTSSNVTSIEINFLSEDTSVKPGKNFVLIVEDTNN 486
           I + NE  +K C   ++ N  SIEI   S+   VK   N    +ED  N
Sbjct: 107 ILNYNERLLKDCTKYSAFNFVSIEIGSASQPARVKLLSNVPPTLEDFQN 155


>BT016002-1|AAV36887.1|  686|Drosophila melanogaster RE40670p
           protein.
          Length = 686

 Score = 29.5 bits (63), Expect = 4.5
 Identities = 13/37 (35%), Positives = 22/37 (59%)
 Frame = +1

Query: 358 NKIKKCNNLTSSNVTSIEINFLSEDTSVKPGKNFVLI 468
           N++   NN +S  VTS  I+  + DT+  PG++ + I
Sbjct: 606 NELNNVNNRSSKEVTSANISVSTSDTNELPGQSNLFI 642


>AE014134-1834|AAF52910.2|  686|Drosophila melanogaster CG5381-PA
           protein.
          Length = 686

 Score = 29.5 bits (63), Expect = 4.5
 Identities = 13/37 (35%), Positives = 22/37 (59%)
 Frame = +1

Query: 358 NKIKKCNNLTSSNVTSIEINFLSEDTSVKPGKNFVLI 468
           N++   NN +S  VTS  I+  + DT+  PG++ + I
Sbjct: 606 NELNNVNNRSSKEVTSANISVSTSDTNELPGQSNLFI 642


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,356,830
Number of Sequences: 53049
Number of extensions: 570626
Number of successful extensions: 1523
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1470
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1517
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 3013199100
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)