Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060989.seq
(676 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC13F5.05 |||thioredoxin family protein|Schizosaccharomyces po... 73 4e-14
SPAC17H9.14c |||protein disulfide isomerase|Schizosaccharomyces ... 72 9e-14
SPAC1F5.02 |||protein disulfide isomerase|Schizosaccharomyces po... 71 2e-13
SPBC12D12.07c |trx2||mitochondrial thioredoxin Trx2|Schizosaccha... 46 5e-06
SPAC7D4.07c |trx1||cytosolic thioredoxin Trx1 |Schizosaccharomyc... 44 2e-05
SPBC577.08c |txl1|trx3|thioredoxin-like I protein Txl1|Schizosac... 40 3e-04
SPBC3D6.13c |||protein disulfide isomerase |Schizosaccharomyces ... 37 0.002
SPBC26H8.06 |grx4||glutaredoxin Grx4|Schizosaccharomyces pombe|c... 37 0.002
SPAC959.05c |||protein disulfide isomerase |Schizosaccharomyces ... 29 0.46
SPCP1E11.05c |||sterol O-acyltransferase |Schizosaccharomyces po... 26 4.3
SPAC17D4.04 ||SPAC458.01|tRNA |Schizosaccharomyces pombe|chr 1||... 25 7.6
SPBC839.07 |ibp1||itty bitty phosphatase Ibp1|Schizosaccharomyce... 25 7.6
SPAC15A10.04c |zpr1||zinc finger protein Zpr1|Schizosaccharomyce... 25 10.0
SPBC12D12.04c |pck2|sts6, pkc1|protein kinase C |Schizosaccharom... 25 10.0
>SPAC13F5.05 |||thioredoxin family protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 363
Score = 72.9 bits (171), Expect = 4e-14
Identities = 46/122 (37%), Positives = 70/122 (57%), Gaps = 10/122 (8%)
Frame = +1
Query: 142 IFYRYLALCNGVLG--PLRFVFRRYRADTE*FRQISYKFREIWIIEFFAPWCGHCKSLVP 315
+F +L +GV G P+ F +++ FR+ K + ++ F+APWCG+CK LVP
Sbjct: 11 LFLACFSLVSGVFGYSPM-FGSNTIELNSKNFRKF-VKAKGPSLVVFYAPWCGYCKKLVP 68
Query: 316 EYKKAARALKGIVKVGAL--DADEHRSVSQKYGVTGFPTIK-IFTGSK-----HTPYQGQ 471
Y+K A L ++ V A+ DAD++R+V +Y V GFPTIK ++ SK T Y G
Sbjct: 69 TYQKLASNLHSLLPVTAVDCDADQNRAVCSQYQVQGFPTIKLVYPSSKGSSLSSTDYNGD 128
Query: 472 RT 477
R+
Sbjct: 129 RS 130
>SPAC17H9.14c |||protein disulfide isomerase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 359
Score = 71.7 bits (168), Expect = 9e-14
Identities = 35/95 (36%), Positives = 52/95 (54%), Gaps = 4/95 (4%)
Frame = +1
Query: 265 IIEFFAPWCGHCKSLVPEYKKAARALK--GIVKVGALDADEHRSVSQKYGVTGFPTIKIF 438
+IEF+A WCGHCKSL P Y++ + V +G +DAD H V+ KY +TGFPT+ F
Sbjct: 43 LIEFYATWCGHCKSLAPVYEELGALFEDHNDVLIGKIDADTHSDVADKYHITGFPTLIWF 102
Query: 439 --TGSKHTPYQGQRTAEGFVEAALKEPRRRHMKIL 537
GS+ Y R + + ++ + KI+
Sbjct: 103 PPDGSEPVQYSNARDVDSLTQFVSEKTGIKKRKIV 137
Score = 60.1 bits (139), Expect = 3e-10
Identities = 29/82 (35%), Positives = 45/82 (54%), Gaps = 5/82 (6%)
Frame = +1
Query: 265 IIEFFAPWCGHCKSLVPEYKKAARALKG--IVKVGALDADEHRSVSQKYGVTGFPTIKIF 438
++EF+A WCG+CK L P Y+ + K V++ ++AD + + + V FPTIK F
Sbjct: 162 LVEFYADWCGYCKRLAPTYETLGKVFKNEPNVEIVKINADVFADIGRLHEVASFPTIKFF 221
Query: 439 -TGSKHTP--YQGQRTAEGFVE 495
K P Y+G R+ E +E
Sbjct: 222 PKDDKDKPELYEGDRSLESLIE 243
>SPAC1F5.02 |||protein disulfide isomerase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 492
Score = 70.5 bits (165), Expect = 2e-13
Identities = 30/87 (34%), Positives = 52/87 (59%), Gaps = 2/87 (2%)
Frame = +1
Query: 256 EIWIIEFFAPWCGHCKSLVPEYKKAARAL-KGIVKVGALDADEHRSVSQKYGVTGFPTIK 432
++ +++F+APWCGHCK+L PEY+ AA L K + + +D E + +Y + G+PT+
Sbjct: 40 KVLMVKFYAPWCGHCKALAPEYESAADELEKDGISLVEVDCTEEGDLCSEYSIRGYPTLN 99
Query: 433 IF-TGSKHTPYQGQRTAEGFVEAALKE 510
+F G + + Y G R + V+ K+
Sbjct: 100 VFKNGKQISQYSGPRKHDALVKYMRKQ 126
Score = 61.3 bits (142), Expect = 1e-10
Identities = 34/78 (43%), Positives = 45/78 (57%), Gaps = 5/78 (6%)
Frame = +1
Query: 265 IIEFFAPWCGHCKSLVPEYKKAARALK--GIVKVGALDADEHRSVSQKYGVTGFPTIKIF 438
++EF+APWCGHCK+L P Y+K A V V +DA E+ +S ++GFPTI F
Sbjct: 377 LVEFYAPWCGHCKNLAPTYEKLAEEYSDDSNVVVAKIDATEN-DIS--VSISGFPTIMFF 433
Query: 439 -TGSKHTP--YQGQRTAE 483
K P Y+G RT E
Sbjct: 434 KANDKVNPVRYEGDRTLE 451
>SPBC12D12.07c |trx2||mitochondrial thioredoxin
Trx2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 121
Score = 46.0 bits (104), Expect = 5e-06
Identities = 20/61 (32%), Positives = 37/61 (60%)
Frame = +1
Query: 256 EIWIIEFFAPWCGHCKSLVPEYKKAARALKGIVKVGALDADEHRSVSQKYGVTGFPTIKI 435
++ +++F+A WCG CK L P +K + + + A++AD+ ++QK GV PT+ +
Sbjct: 36 KVTVVDFYADWCGPCKYLKPFLEKLSEQNQKASFI-AVNADKFSDIAQKNGVYALPTMVL 94
Query: 436 F 438
F
Sbjct: 95 F 95
>SPAC7D4.07c |trx1||cytosolic thioredoxin Trx1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 103
Score = 44.0 bits (99), Expect = 2e-05
Identities = 24/99 (24%), Positives = 53/99 (53%), Gaps = 1/99 (1%)
Frame = +1
Query: 214 ADTE*FRQISYKFREIWIIEFFAPWCGHCKSLVPEYKKAARALKGIVKVGALDADEHRSV 393
+D+ F+ I + + + +++FFA WCG CK++ P++++ + + +D D+ +
Sbjct: 6 SDSSEFKSIVCQDKLV-VVDFFATWCGPCKAIAPKFEQFSNTYSDATFI-KVDVDQLSEI 63
Query: 394 SQKYGVTGFPTIKIF-TGSKHTPYQGQRTAEGFVEAALK 507
+ + GV P+ ++ G K G A+ +EA++K
Sbjct: 64 AAEAGVHAMPSFFLYKNGEKIEEIVGANPAK--LEASIK 100
>SPBC577.08c |txl1|trx3|thioredoxin-like I protein
Txl1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 290
Score = 39.9 bits (89), Expect = 3e-04
Identities = 19/62 (30%), Positives = 30/62 (48%), Gaps = 1/62 (1%)
Frame = +1
Query: 268 IEFFAPWCGHCKSLVPEYKKAARALKGIVKVGA-LDADEHRSVSQKYGVTGFPTIKIFTG 444
++ +A WCG CK++ P + + A V A ++ DE R ++ GV PT F
Sbjct: 24 VDCYADWCGPCKAISPLFSQLASKYASPKFVFAKVNVDEQRQIASGLGVKAMPTFVFFEN 83
Query: 445 SK 450
K
Sbjct: 84 GK 85
>SPBC3D6.13c |||protein disulfide isomerase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 726
Score = 37.1 bits (82), Expect = 0.002
Identities = 16/72 (22%), Positives = 31/72 (43%)
Frame = +1
Query: 253 REIWIIEFFAPWCGHCKSLVPEYKKAARALKGIVKVGALDADEHRSVSQKYGVTGFPTIK 432
+E W I+F++ C C + + A ++G + V ++ + ++Y + FPT
Sbjct: 298 KEGWFIQFYSSECDDCDDVSTAWYAMANRMRGKLNVAHINCAVSKRACKQYSIQYFPTFL 357
Query: 433 IFTGSKHTPYQG 468
F Y G
Sbjct: 358 FFKEEAFVEYVG 369
Score = 29.5 bits (63), Expect = 0.46
Identities = 15/62 (24%), Positives = 27/62 (43%), Gaps = 3/62 (4%)
Frame = +1
Query: 262 WIIEFFAPWCGHCKSLVPEYKKAARALKGIVKVGAL---DADEHRSVSQKYGVTGFPTIK 432
W I+++ P CG CK L P + K V+ + D + +S + PT+
Sbjct: 45 WFIKYYLPSCGACKRLGPMWDNMVEKAKEQVEGSNFHFGEVDCSKELSSCANIRAVPTLY 104
Query: 433 IF 438
++
Sbjct: 105 LY 106
>SPBC26H8.06 |grx4||glutaredoxin Grx4|Schizosaccharomyces pombe|chr
2|||Manual
Length = 244
Score = 37.1 bits (82), Expect = 0.002
Identities = 19/77 (24%), Positives = 40/77 (51%), Gaps = 1/77 (1%)
Frame = +1
Query: 223 E*FRQISYKFRE-IWIIEFFAPWCGHCKSLVPEYKKAARALKGIVKVGALDADEHRSVSQ 399
E F++I +E I ++ F+APW CK + + + A+ K V + ++A++ +++
Sbjct: 9 EQFQEILQNGKEQIILLNFYAPWAAPCKQMNQVFDQFAKDTKNAVFL-KIEAEKFSDIAE 67
Query: 400 KYGVTGFPTIKIFTGSK 450
+ V P + G+K
Sbjct: 68 SFDVNAVPLFVLIHGAK 84
>SPAC959.05c |||protein disulfide isomerase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 632
Score = 29.5 bits (63), Expect = 0.46
Identities = 13/60 (21%), Positives = 24/60 (40%)
Frame = +1
Query: 289 CGHCKSLVPEYKKAARALKGIVKVGALDADEHRSVSQKYGVTGFPTIKIFTGSKHTPYQG 468
C C + R +K+ ++ DE + + + + FPT ++F G Y G
Sbjct: 209 CEDCFHWEAVWSSITRNTDERLKMAQVNCDEEKEMCNHFHIKKFPTFRVFQGFDSIQYNG 268
>SPCP1E11.05c |||sterol O-acyltransferase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 472
Score = 26.2 bits (55), Expect = 4.3
Identities = 12/26 (46%), Positives = 18/26 (69%), Gaps = 1/26 (3%)
Frame = +1
Query: 577 CHYS-NRQQLQRTGLDSDDLWLVEFY 651
C++S N+ Q ++T LD D+ VEFY
Sbjct: 194 CYHSLNKLQSKKTDLDDDERSSVEFY 219
>SPAC17D4.04 ||SPAC458.01|tRNA |Schizosaccharomyces pombe|chr
1|||Manual
Length = 654
Score = 25.4 bits (53), Expect = 7.6
Identities = 13/47 (27%), Positives = 27/47 (57%)
Frame = +2
Query: 362 VP*MLMNIEVYHRNMESLASPQLRYSQGASTHHIKVRGQQKDLLKLL 502
VP +L+N+E +H+ ++ A+P + +Q H + ++D+ LL
Sbjct: 134 VPPLLLNVESHHKVLDMCAAPGSKTAQLLEALHKPTK--KEDITTLL 178
>SPBC839.07 |ibp1||itty bitty phosphatase Ibp1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 138
Score = 25.4 bits (53), Expect = 7.6
Identities = 17/51 (33%), Positives = 24/51 (47%), Gaps = 1/51 (1%)
Frame = +1
Query: 295 HCKSLVPEYKKAARALKGIVKVGALDADEHRSVSQKYGV-TGFPTIKIFTG 444
HC KAAR L I++ ++ E S+SQK + PT+ I G
Sbjct: 69 HCTYSQVRGPKAARVLSEILRNRITESKEKLSLSQKEKLFQNLPTVYILHG 119
>SPAC15A10.04c |zpr1||zinc finger protein Zpr1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 459
Score = 25.0 bits (52), Expect = 10.0
Identities = 12/42 (28%), Positives = 17/42 (40%)
Frame = -3
Query: 386 LCSSASKAPTFTMPFRALAAFLYSGTRLLQCPHHGAKNSMIQ 261
LC K T + + F +CPH G KN+ +Q
Sbjct: 37 LCMECGKNGTTKLLLTVIPYFREVVLMSFECPHCGFKNAQVQ 78
>SPBC12D12.04c |pck2|sts6, pkc1|protein kinase C
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1016
Score = 25.0 bits (52), Expect = 10.0
Identities = 9/19 (47%), Positives = 12/19 (63%)
Frame = +1
Query: 280 APWCGHCKSLVPEYKKAAR 336
A WC HC ++P +K AR
Sbjct: 484 ANWCCHCGYILPLGRKTAR 502
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,808,166
Number of Sequences: 5004
Number of extensions: 57451
Number of successful extensions: 167
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 154
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 164
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 309878492
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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