Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060989.seq
(676 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_46929| Best HMM Match : Thioredoxin (HMM E-Value=0) 102 3e-22
SB_48081| Best HMM Match : No HMM Matches (HMM E-Value=.) 84 9e-17
SB_35157| Best HMM Match : Thioredoxin (HMM E-Value=0) 82 5e-16
SB_42595| Best HMM Match : Thioredoxin (HMM E-Value=0) 81 6e-16
SB_30398| Best HMM Match : Thioredoxin (HMM E-Value=0) 72 5e-13
SB_30498| Best HMM Match : No HMM Matches (HMM E-Value=.) 65 6e-11
SB_45978| Best HMM Match : Thioredoxin (HMM E-Value=4.19997e-41) 64 1e-10
SB_56064| Best HMM Match : No HMM Matches (HMM E-Value=.) 63 2e-10
SB_20276| Best HMM Match : Thioredoxin (HMM E-Value=9.8e-06) 57 1e-08
SB_3640| Best HMM Match : Thioredoxin (HMM E-Value=4.3e-33) 56 3e-08
SB_17740| Best HMM Match : Thioredoxin (HMM E-Value=1.8e-27) 54 1e-07
SB_30496| Best HMM Match : No HMM Matches (HMM E-Value=.) 46 2e-05
SB_14273| Best HMM Match : DUF1000 (HMM E-Value=0) 46 3e-05
SB_27151| Best HMM Match : Thioredoxin (HMM E-Value=9.2e-32) 40 0.001
SB_44457| Best HMM Match : Thioredoxin (HMM E-Value=2.2e-07) 40 0.002
SB_49513| Best HMM Match : Thioredoxin (HMM E-Value=1.8e-19) 39 0.004
SB_218| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.007
SB_28181| Best HMM Match : RVP (HMM E-Value=0.00058) 36 0.023
SB_55398| Best HMM Match : Thioredoxin (HMM E-Value=3.6e-21) 36 0.030
SB_6800| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.052
SB_2654| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.16
SB_38445| Best HMM Match : ERp29 (HMM E-Value=2.2e-19) 33 0.16
SB_2655| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.21
SB_43183| Best HMM Match : MethyltransfD12 (HMM E-Value=2) 32 0.37
SB_43128| Best HMM Match : DUF713 (HMM E-Value=6.7) 32 0.37
SB_55515| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.37
SB_56293| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.85
SB_48181| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.85
SB_28982| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.4
SB_30177| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.4
SB_46101| Best HMM Match : Lactamase_B (HMM E-Value=0.11) 29 4.5
SB_49098| Best HMM Match : Peptidase_M14 (HMM E-Value=4.5e-12) 28 6.0
>SB_46929| Best HMM Match : Thioredoxin (HMM E-Value=0)
Length = 362
Score = 102 bits (244), Expect = 3e-22
Identities = 47/89 (52%), Positives = 62/89 (69%), Gaps = 5/89 (5%)
Frame = +1
Query: 253 REIWIIEFFAPWCGHCKSLVPEYKKAARALKGIVKVGALDADEHRSVSQKYGVTGFPTIK 432
+++W++EFFAPWCGHC+ L PE+ KAA LKG VKVGALDA H + +Y V G+PTIK
Sbjct: 97 KDLWLVEFFAPWCGHCQRLAPEWAKAATELKGKVKVGALDATVHTVTASRYQVQGYPTIK 156
Query: 433 IF-TGSKHT----PYQGQRTAEGFVEAAL 504
+F G K++ YQG RTA ++ AL
Sbjct: 157 VFAAGIKNSHSVEDYQGGRTASDIIQYAL 185
Score = 56.0 bits (129), Expect = 3e-08
Identities = 36/104 (34%), Positives = 55/104 (52%), Gaps = 12/104 (11%)
Frame = +1
Query: 376 DEHRSVSQKYGVTGFPTIKIFTGSKHTP--YQGQRTAEGFVEAALKEPRRRHMKILXXXX 549
D H+SV Y + GFPTIKIF +K++P Y GQRTA+G V+AA++ + + +
Sbjct: 2 DVHQSVGGPYNIRGFPTIKIFGANKNSPQDYNGQRTAQGIVDAAMRAAQEAVSQRMSGGG 61
Query: 550 XXXXXXXXXCHYS--NRQQL--------QRTGLDSDDLWLVEFY 651
S N++ + ++ L+S DLWLVEF+
Sbjct: 62 RSSSGGGGRRGGSGGNKEDVVELTDTNFEKEVLNSKDLWLVEFF 105
>SB_48081| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 645
Score = 84.2 bits (199), Expect = 9e-17
Identities = 37/79 (46%), Positives = 52/79 (65%), Gaps = 3/79 (3%)
Frame = +1
Query: 259 IWIIEFFAPWCGHCKSLVPEYKKAARALK---GIVKVGALDADEHRSVSQKYGVTGFPTI 429
+ ++EFFAPWCGHCK L PEY+KAA+ L+ + + +DA ++QKY V G+PT+
Sbjct: 195 LMLVEFFAPWCGHCKQLAPEYEKAAQELQKHDPPIPLAIVDATIESELAQKYEVQGYPTL 254
Query: 430 KIFTGSKHTPYQGQRTAEG 486
K+F K T Y+GQR G
Sbjct: 255 KVFRKGKATEYKGQRDQYG 273
Score = 82.2 bits (194), Expect = 3e-16
Identities = 38/87 (43%), Positives = 53/87 (60%), Gaps = 3/87 (3%)
Frame = +1
Query: 259 IWIIEFFAPWCGHCKSLVPEYKKAARALK---GIVKVGALDADEHRSVSQKYGVTGFPTI 429
I ++EF+APWCGHCKSL PEY KAA+ +K V +DA ++Q++ V+G+PT+
Sbjct: 80 IILVEFYAPWCGHCKSLAPEYAKAAKKMKLNDPPVPFAKMDATVASDIAQRFDVSGYPTL 139
Query: 430 KIFTGSKHTPYQGQRTAEGFVEAALKE 510
KIF Y+G R G VE K+
Sbjct: 140 KIFRKGTPYEYEGPREESGIVEYMKKQ 166
Score = 41.5 bits (93), Expect = 6e-04
Identities = 27/82 (32%), Positives = 41/82 (50%), Gaps = 5/82 (6%)
Frame = +1
Query: 265 IIEFFAPWCGHCKSLVPEYKKAARALKG--IVKVGALDADEHRSVSQKYGVTGFPTIKIF 438
+IEF+APWCG +L P +KK + + + + +DA + V Y V GFPTI
Sbjct: 547 LIEFYAPWCG--IALEPTFKKLGKHFRNDKNIVIAKIDATAN-DVPSTYAVEGFPTIYFA 603
Query: 439 TG-SKHTP--YQGQRTAEGFVE 495
T K P + G R + ++
Sbjct: 604 TSKDKKNPIKFDGGRELKDLIK 625
>SB_35157| Best HMM Match : Thioredoxin (HMM E-Value=0)
Length = 1056
Score = 81.8 bits (193), Expect = 5e-16
Identities = 40/91 (43%), Positives = 54/91 (59%), Gaps = 5/91 (5%)
Frame = +1
Query: 253 REIWIIEFFAPWCGHCKSLVPEYKKAARALK---GIVKVGALDADE-HRSVSQKYGVTGF 420
++I ++EFFAPWCGHCK L PEY+ AA ALK V + +D E + KYGV+G+
Sbjct: 555 KDIMLVEFFAPWCGHCKRLAPEYETAAEALKKNDPPVPLAKVDCTEAGKDTCSKYGVSGY 614
Query: 421 PTIKIF-TGSKHTPYQGQRTAEGFVEAALKE 510
PT+KIF G Y G R + G + K+
Sbjct: 615 PTLKIFRNGEMSKDYDGPRDSSGIIRYMKKQ 645
Score = 48.4 bits (110), Expect = 5e-06
Identities = 22/59 (37%), Positives = 33/59 (55%), Gaps = 2/59 (3%)
Frame = +1
Query: 265 IIEFFAPWCGHCKSLVPEYKKAARALKGI--VKVGALDADEHRSVSQKYGVTGFPTIKI 435
+IEF+APWCGHCKSL P+Y + L+ + + + +DA + + V G I I
Sbjct: 884 LIEFYAPWCGHCKSLEPKYNELGEKLQDVKDIVIAKMDATAN-DAPPNFSVQGIIIISI 941
>SB_42595| Best HMM Match : Thioredoxin (HMM E-Value=0)
Length = 536
Score = 81.4 bits (192), Expect = 6e-16
Identities = 37/79 (46%), Positives = 49/79 (62%), Gaps = 3/79 (3%)
Frame = +1
Query: 265 IIEFFAPWCGHCKSLVPEYKKAARAL---KGIVKVGALDADEHRSVSQKYGVTGFPTIKI 435
++EF+APWCGHCK+L PEY KAA L K +K+ +DA + +K+ V G+PTIK
Sbjct: 45 LVEFYAPWCGHCKALAPEYAKAAGQLKSEKSEIKLAKVDATAETKLGEKFQVQGYPTIKF 104
Query: 436 FTGSKHTPYQGQRTAEGFV 492
F K + Y G RTA V
Sbjct: 105 FKDGKPSEYAGGRTAPEIV 123
Score = 55.2 bits (127), Expect = 5e-08
Identities = 27/77 (35%), Positives = 37/77 (48%), Gaps = 1/77 (1%)
Frame = +1
Query: 268 IEFFAPWCGHCKSLVPEYKKAARALKGIVKVGALDADEHRSVSQKYGVTGFPTIKIF-TG 444
+EF+APWCGHCK L P + + K + D + + V FPTIK F
Sbjct: 407 VEFYAPWCGHCKQLAPIWDQLGEKYKDHADIVVAKMDSTANEVEGVKVHSFPTIKYFPKE 466
Query: 445 SKHTPYQGQRTAEGFVE 495
+ Y G RT + FV+
Sbjct: 467 GEAVDYNGGRTLDDFVK 483
>SB_30398| Best HMM Match : Thioredoxin (HMM E-Value=0)
Length = 295
Score = 71.7 bits (168), Expect = 5e-13
Identities = 33/81 (40%), Positives = 45/81 (55%), Gaps = 4/81 (4%)
Frame = +1
Query: 265 IIEFFAPWCGHCKSLVPEYKKAARAL--KGIVKVGALDADEHRSVSQKYGVTGFPTIKIF 438
++EF+APWCGHCK L P Y++ A V + +DAD R + ++ V GFPTIK F
Sbjct: 43 LVEFYAPWCGHCKQLAPTYEQLGEAYTQSSDVIIAKVDADGDRDLGSRFDVKGFPTIKYF 102
Query: 439 TGSKHTP--YQGQRTAEGFVE 495
TP Y G R F++
Sbjct: 103 PKGSTTPEEYNGGRDINDFIK 123
>SB_30498| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 564
Score = 64.9 bits (151), Expect = 6e-11
Identities = 30/85 (35%), Positives = 52/85 (61%), Gaps = 5/85 (5%)
Frame = +1
Query: 253 REIWIIEFFAPWCGHCKSLVPEYKKAARAL--KGIVKVGALDADEHRS--VSQKYGVTGF 420
++I +++F+APWC HC+ L+P+ + AA AL KG+ + +D + RS + + + G+
Sbjct: 37 KDIMLVDFYAPWCHHCQELLPQLEGAANALAAKGLFQFAKVDCTDPRSKVLCDNFKIEGY 96
Query: 421 PTIKIFTGSKHT-PYQGQRTAEGFV 492
P++K+F K+ Y GQRT V
Sbjct: 97 PSVKLFKFGKYAGDYIGQRTDAALV 121
>SB_45978| Best HMM Match : Thioredoxin (HMM E-Value=4.19997e-41)
Length = 271
Score = 63.7 bits (148), Expect = 1e-10
Identities = 26/70 (37%), Positives = 42/70 (60%), Gaps = 3/70 (4%)
Frame = +1
Query: 247 KFREIWIIEFFAPWCGHCKSLVPEYKKAARAL---KGIVKVGALDADEHRSVSQKYGVTG 417
K E ++ +FAPWCGHC + P Y KAA+ L + A+D +H+ V++K + G
Sbjct: 65 KSHENVLVMYFAPWCGHCNEMKPNYYKAAQVLHDEDANCNLAAVDCTKHKDVAKKVALAG 124
Query: 418 FPTIKIFTGS 447
+PT+K++ S
Sbjct: 125 YPTVKLYKAS 134
Score = 60.5 bits (140), Expect = 1e-09
Identities = 30/86 (34%), Positives = 45/86 (52%), Gaps = 3/86 (3%)
Frame = +1
Query: 265 IIEFFAPWCGHCKSLVPEYKKAARALKGIVK--VGALDADEHRSVSQKYGVTGFPTIKIF 438
++ F+APWCGHCK+ P+Y+KAA K LD + V K V G+PT++ +
Sbjct: 168 LVMFYAPWCGHCKNAKPKYEKAAETFKDQPNRVFAKLDCTKFGDVCDKEEVNGYPTLRYY 227
Query: 439 TGSKH-TPYQGQRTAEGFVEAALKEP 513
K Y G R E + + ++EP
Sbjct: 228 LYGKFVVEYDGDRVTEDLI-SFMEEP 252
>SB_56064| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 711
Score = 62.9 bits (146), Expect = 2e-10
Identities = 19/64 (29%), Positives = 41/64 (64%)
Frame = +1
Query: 256 EIWIIEFFAPWCGHCKSLVPEYKKAARALKGIVKVGALDADEHRSVSQKYGVTGFPTIKI 435
+ W+++F+APWCG C P+Y++ A+ LKG V+ ++ ++ + + + +PT+++
Sbjct: 452 DAWVVDFYAPWCGPCMRFAPKYEQLAKMLKGKVRAAKVNCEQDYGLCSEANIHSYPTVRL 511
Query: 436 FTGS 447
+ GS
Sbjct: 512 YLGS 515
Score = 62.5 bits (145), Expect = 3e-10
Identities = 27/79 (34%), Positives = 43/79 (54%), Gaps = 1/79 (1%)
Frame = +1
Query: 262 WIIEFFAPWCGHCKSLVPEYKKAARALKG-IVKVGALDADEHRSVSQKYGVTGFPTIKIF 438
+ ++FFAPWC C L+PEY+KAAR+ G V G +D H + +Y + +PT ++
Sbjct: 305 FFVDFFAPWCPPCMRLLPEYRKAARSFVGKPVGFGTVDCTVHSQLCHQYNIRSYPTTILY 364
Query: 439 TGSKHTPYQGQRTAEGFVE 495
S+ + G A +E
Sbjct: 365 NNSQPHQFIGHHNALDIIE 383
>SB_20276| Best HMM Match : Thioredoxin (HMM E-Value=9.8e-06)
Length = 70
Score = 56.8 bits (131), Expect = 1e-08
Identities = 21/31 (67%), Positives = 26/31 (83%)
Frame = +1
Query: 253 REIWIIEFFAPWCGHCKSLVPEYKKAARALK 345
++I ++EFFAPWCGHCK L PEY+ AA ALK
Sbjct: 30 KDIMLVEFFAPWCGHCKRLAPEYETAAEALK 60
>SB_3640| Best HMM Match : Thioredoxin (HMM E-Value=4.3e-33)
Length = 386
Score = 56.0 bits (129), Expect = 3e-08
Identities = 24/57 (42%), Positives = 38/57 (66%), Gaps = 3/57 (5%)
Frame = +1
Query: 265 IIEFFAPWCGHCKSLVPEYKKAARALKGIVKVG---ALDADEHRSVSQKYGVTGFPT 426
++ F+APWCGHCK++ PEY AA+ LK G A+DA + ++ +++ V G+PT
Sbjct: 103 LVMFYAPWCGHCKAMKPEYVDAAQTLKEQEIPGVLAAVDATKEAALGKRFKVEGYPT 159
Score = 39.5 bits (88), Expect = 0.002
Identities = 13/24 (54%), Positives = 17/24 (70%)
Frame = +1
Query: 265 IIEFFAPWCGHCKSLVPEYKKAAR 336
++ F+APWCGHCK PE AA+
Sbjct: 216 LVMFYAPWCGHCKKAKPELMSAAK 239
>SB_17740| Best HMM Match : Thioredoxin (HMM E-Value=1.8e-27)
Length = 472
Score = 53.6 bits (123), Expect = 1e-07
Identities = 30/95 (31%), Positives = 51/95 (53%), Gaps = 13/95 (13%)
Frame = +1
Query: 265 IIEFFAPWCGHCKSLVPEYKKAARAL----KGIVKVGALDADEH----RSVSQKYGVTGF 420
+++F+APWC HCK + P+YK A+ L V++ +D + + +KY V
Sbjct: 155 LVDFYAPWCFHCKKMAPDYKDVAKELLILSHNSVRLAKVDCSANNMATKKTCKKYNVKFL 214
Query: 421 PTIKIFTGSKHT-PYQG----QRTAEGFVEAALKE 510
PTI +F K ++G +++ +GFV A+KE
Sbjct: 215 PTIYLFHDGKFVEEFEGNNRNKKSIKGFVMDAVKE 249
Score = 34.7 bits (76), Expect = 0.069
Identities = 13/33 (39%), Positives = 20/33 (60%)
Frame = +1
Query: 247 KFREIWIIEFFAPWCGHCKSLVPEYKKAARALK 345
K E +++F+APWC C+ L P + AA L+
Sbjct: 66 KKNEYVLVDFYAPWCSDCQRLSPLFDTAALQLR 98
>SB_30496| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 488
Score = 46.4 bits (105), Expect = 2e-05
Identities = 22/73 (30%), Positives = 41/73 (56%), Gaps = 4/73 (5%)
Frame = +1
Query: 247 KFREIWIIEFFAPWCGHCKSLVPEYKKAARAL----KGIVKVGALDADEHRSVSQKYGVT 414
K +E+ +++F+APWC C +L P+Y+KAAR L K ++ ++ + ++ GV
Sbjct: 37 KDKEVMLVDFYAPWCSDCDNLRPKYEKAARDLAKEHKFVMAKALMNTNSTQTTCLPMGVH 96
Query: 415 GFPTIKIFTGSKH 453
+ T+ +T H
Sbjct: 97 YWRTLLAYTIGVH 109
>SB_14273| Best HMM Match : DUF1000 (HMM E-Value=0)
Length = 308
Score = 46.0 bits (104), Expect = 3e-05
Identities = 21/58 (36%), Positives = 31/58 (53%)
Frame = +1
Query: 265 IIEFFAPWCGHCKSLVPEYKKAARALKGIVKVGALDADEHRSVSQKYGVTGFPTIKIF 438
+ +F A WCG CKS+ P Y + K V + +D D + ++ K GVT PT + F
Sbjct: 31 VADFTASWCGPCKSIAPVYSGLSEKYKQAVFL-KIDVDVCQELAAKQGVTAMPTFQFF 87
>SB_27151| Best HMM Match : Thioredoxin (HMM E-Value=9.2e-32)
Length = 456
Score = 40.3 bits (90), Expect = 0.001
Identities = 16/58 (27%), Positives = 30/58 (51%)
Frame = +1
Query: 265 IIEFFAPWCGHCKSLVPEYKKAARALKGIVKVGALDADEHRSVSQKYGVTGFPTIKIF 438
+I+F A WCG CKS+ P + + +V + +D D+ + ++ G+ PT +
Sbjct: 32 VIDFTATWCGPCKSIAPVFTNLSMKFMDVVFL-KVDVDQCQLTAESCGIRAMPTFHFY 88
>SB_44457| Best HMM Match : Thioredoxin (HMM E-Value=2.2e-07)
Length = 438
Score = 39.9 bits (89), Expect = 0.002
Identities = 17/44 (38%), Positives = 27/44 (61%)
Frame = +1
Query: 247 KFREIWIIEFFAPWCGHCKSLVPEYKKAARALKGIVKVGALDAD 378
K E+ I+F A WCG C+ + P++++ A+ KG VK +D D
Sbjct: 9 KDNEVAAIDFTATWCGPCRMIGPKFEEMAKEFKG-VKCAKVDVD 51
>SB_49513| Best HMM Match : Thioredoxin (HMM E-Value=1.8e-19)
Length = 975
Score = 38.7 bits (86), Expect = 0.004
Identities = 26/84 (30%), Positives = 41/84 (48%), Gaps = 7/84 (8%)
Frame = +1
Query: 265 IIEFFAPWCGHCKSLVPEYKKAARALKGI--VKVGALDADEHRSVSQKYGVTGFPTIKIF 438
++ F+ PWCG C + P AR + I V V +DAD++ + V+ +P+I +F
Sbjct: 539 LLVFYTPWCGMCINFAPVLLAVARFFQDISQVSVTRIDADQN-DLPWNLTVSSYPSIILF 597
Query: 439 -TGSKHT----PYQGQRTAEGFVE 495
G K + P RTA +E
Sbjct: 598 PAGRKDSSIAFPSNTPRTATRLIE 621
>SB_218| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 94
Score = 37.9 bits (84), Expect = 0.007
Identities = 15/39 (38%), Positives = 23/39 (58%)
Frame = +1
Query: 265 IIEFFAPWCGHCKSLVPEYKKAARALKGIVKVGALDADE 381
+I+F+A WCG C+ + P++KK A V +D DE
Sbjct: 34 VIDFYAEWCGPCRQIKPKFKKMALEEFKDVFFAKIDVDE 72
>SB_28181| Best HMM Match : RVP (HMM E-Value=0.00058)
Length = 664
Score = 36.3 bits (80), Expect = 0.023
Identities = 19/55 (34%), Positives = 28/55 (50%)
Frame = +1
Query: 274 FFAPWCGHCKSLVPEYKKAARALKGIVKVGALDADEHRSVSQKYGVTGFPTIKIF 438
F+APWCG + V E+ AA L G V A++ S +KY + FP ++
Sbjct: 459 FYAPWCGQSRRAVEEFNIAASLLYGKVTFIAINC-WAGSCREKYTLDSFPKFFVY 512
>SB_55398| Best HMM Match : Thioredoxin (HMM E-Value=3.6e-21)
Length = 186
Score = 35.9 bits (79), Expect = 0.030
Identities = 22/70 (31%), Positives = 37/70 (52%), Gaps = 1/70 (1%)
Frame = +1
Query: 268 IEFFAPWCGHCKSLVPEYKKAARALKGIVKVGALDADEHRSVSQKYGVTGFPTIKIF-TG 444
++F+APWC HC L P +++ A K +AD ++S+ + G+PT+ +F G
Sbjct: 111 VKFYAPWCIHCIKLAPIWERLAEDFKD-------NAD--ITISK---INGYPTLMLFKDG 158
Query: 445 SKHTPYQGQR 474
+ Y G R
Sbjct: 159 VQKKEYSGNR 168
>SB_6800| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 141
Score = 35.1 bits (77), Expect = 0.052
Identities = 29/91 (31%), Positives = 45/91 (49%), Gaps = 6/91 (6%)
Frame = +1
Query: 28 RVYFTYLSYTL*CAVNLDLNKFYNRLFINSVKFHNVTRIFYRYLALCNGVLGPLRFVF-- 201
RVY+ YLS + + F N I+S + H+ +R++YRYL+ N +L F
Sbjct: 31 RVYYKYLSNRISKFFASSFHTFENLRRISSDR-HSFSRVYYRYLS--NRILKFFASSFHT 87
Query: 202 ----RRYRADTE*FRQISYKFREIWIIEFFA 282
RR +D F ++ YK+ I +FFA
Sbjct: 88 FENLRRISSDRHSFSRVYYKYLSNRISKFFA 118
>SB_2654| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 111
Score = 33.5 bits (73), Expect = 0.16
Identities = 17/57 (29%), Positives = 23/57 (40%)
Frame = +1
Query: 280 APWCGHCKSLVPEYKKAARALKGIVKVGALDADEHRSVSQKYGVTGFPTIKIFTGSK 450
A WC CK L P G V + +D D ++ +GV PT+ G K
Sbjct: 46 ACWCNPCKVLTPRLDAIIAEQDGKVDLAKVDIDVMGELAFNFGVNAVPTVIGMKGGK 102
>SB_38445| Best HMM Match : ERp29 (HMM E-Value=2.2e-19)
Length = 335
Score = 33.5 bits (73), Expect = 0.16
Identities = 20/79 (25%), Positives = 37/79 (46%), Gaps = 4/79 (5%)
Frame = +1
Query: 268 IEFFAPWCGHCKSLVPEYKKAAR--ALKGIVKVGALDADEHRSVSQKYGVTGFPTIKIFT 441
I F+APW HC+ ++ + + A A + + VG +A E ++ +Y + +P + F
Sbjct: 48 IFFYAPWDDHCQRILQIFDQVADEFADRDDIVVGKSNAYEDVKIATRYWIDRYPMFRYFI 107
Query: 442 GSKHT--PYQGQRTAEGFV 492
T Y G + F+
Sbjct: 108 KGSTTEETYDGGFKPDDFI 126
>SB_2655| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 80
Score = 33.1 bits (72), Expect = 0.21
Identities = 16/55 (29%), Positives = 22/55 (40%)
Frame = +1
Query: 286 WCGHCKSLVPEYKKAARALKGIVKVGALDADEHRSVSQKYGVTGFPTIKIFTGSK 450
WC CK L P G V + +D D ++ +GV PT+ G K
Sbjct: 2 WCNPCKVLTPRLDAIIAEQDGKVDLAKVDIDVMGELAFNFGVNAVPTVIGMKGGK 56
>SB_43183| Best HMM Match : MethyltransfD12 (HMM E-Value=2)
Length = 604
Score = 32.3 bits (70), Expect = 0.37
Identities = 26/89 (29%), Positives = 42/89 (47%), Gaps = 4/89 (4%)
Frame = +1
Query: 28 RVYFTYLSYTL*CAVNLDLNKFYNRLFINSVKFHNVTRIFYRYLALCNGVLGPLRFV--- 198
RVY+ YLS + + F N I+S + H+ +R++Y+YL+ F
Sbjct: 132 RVYYKYLSNRISKFFASSFHTFENLRRISSDR-HSFSRVYYKYLSNRISKFFASSFHTFE 190
Query: 199 -FRRYRADTE*FRQISYKFREIWIIEFFA 282
RR +D F ++ YK+ I +FFA
Sbjct: 191 NLRRISSDRHSFSRVYYKYLSNRISKFFA 219
>SB_43128| Best HMM Match : DUF713 (HMM E-Value=6.7)
Length = 251
Score = 32.3 bits (70), Expect = 0.37
Identities = 26/89 (29%), Positives = 42/89 (47%), Gaps = 4/89 (4%)
Frame = +1
Query: 28 RVYFTYLSYTL*CAVNLDLNKFYNRLFINSVKFHNVTRIFYRYLALCNGVLGPLRFV--- 198
RVY+ YLS + + F N I+S + H+ +R++Y+YL+ F
Sbjct: 141 RVYYKYLSNRISKFFASSFHTFENLRRISSDR-HSFSRVYYKYLSNRISKFFASSFHTFE 199
Query: 199 -FRRYRADTE*FRQISYKFREIWIIEFFA 282
RR +D F ++ YK+ I +FFA
Sbjct: 200 NLRRISSDRHSFSRVYYKYLSNRISKFFA 228
>SB_55515| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 215
Score = 32.3 bits (70), Expect = 0.37
Identities = 26/89 (29%), Positives = 42/89 (47%), Gaps = 4/89 (4%)
Frame = +1
Query: 28 RVYFTYLSYTL*CAVNLDLNKFYNRLFINSVKFHNVTRIFYRYLALCNGVLGPLRFV--- 198
RVY+ YLS + + F N I+S + H+ +R++Y+YL+ F
Sbjct: 103 RVYYKYLSNRISKFFASSFHTFENLRRISSDR-HSFSRVYYKYLSNRISKFFASSFHTSE 161
Query: 199 -FRRYRADTE*FRQISYKFREIWIIEFFA 282
RR +D F ++ YK+ I +FFA
Sbjct: 162 NLRRISSDRHSFSRVYYKYLSNRISKFFA 190
Score = 29.1 bits (62), Expect = 3.4
Identities = 24/89 (26%), Positives = 42/89 (47%), Gaps = 4/89 (4%)
Frame = +1
Query: 28 RVYFTYLSYTL*CAVNLDLNKFYNRLFINSVKFHNVTRIFYRYLALCNGVLGPLRFV--- 198
R+Y+ YLS + + F N I+S ++ + +R++Y+YL+ F
Sbjct: 67 RLYYKYLSNRILKFFASSFHTFENLRRISSNRY-SFSRVYYKYLSNRISKFFASSFHTFE 125
Query: 199 -FRRYRADTE*FRQISYKFREIWIIEFFA 282
RR +D F ++ YK+ I +FFA
Sbjct: 126 NLRRISSDRHSFSRVYYKYLSNRISKFFA 154
>SB_56293| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 300
Score = 31.1 bits (67), Expect = 0.85
Identities = 15/59 (25%), Positives = 30/59 (50%), Gaps = 3/59 (5%)
Frame = +1
Query: 355 KVGALDAD---EHRSVSQKYGVTGFPTIKIFTGSKHTPYQGQRTAEGFVEAALKEPRRR 522
++ A+D D HRS+S ++G + T + +G + PY ++ ++ + L P R
Sbjct: 169 EMSAVDWDASYSHRSISGEHGTSRLATARACSGELYNPYTDVHSSTSYLSSQLTAPSAR 227
>SB_48181| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 215
Score = 31.1 bits (67), Expect = 0.85
Identities = 26/89 (29%), Positives = 41/89 (46%), Gaps = 4/89 (4%)
Frame = +1
Query: 28 RVYFTYLSYTL*CAVNLDLNKFYNRLFINSVKFHNVTRIFYRYLALCNGVLGPLRFV--- 198
RVY+ YLS + + F N I+S + H+ +R +Y+YL+ F
Sbjct: 67 RVYYKYLSNRILKFFASSFHTFENLRRISSDR-HSFSRFYYKYLSNRISKFFASSFHTSE 125
Query: 199 -FRRYRADTE*FRQISYKFREIWIIEFFA 282
RR +D F ++ YK+ I +FFA
Sbjct: 126 NLRRISSDRHSFSRVYYKYLSNRISKFFA 154
>SB_28982| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1287
Score = 29.1 bits (62), Expect = 3.4
Identities = 12/33 (36%), Positives = 19/33 (57%)
Frame = +1
Query: 262 WIIEFFAPWCGHCKSLVPEYKKAARALKGIVKV 360
++IE F P C H + LVP K A + G++ +
Sbjct: 914 YVIEPFFPHCSHREDLVPVIKILAASALGVITI 946
>SB_30177| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 643
Score = 29.1 bits (62), Expect = 3.4
Identities = 15/33 (45%), Positives = 20/33 (60%)
Frame = -2
Query: 609 SLKLLSVRVMTXRLIRRGPTRFLAQDFHMPSPW 511
S L SVR+ L R+GP + +QD +PSPW
Sbjct: 183 STSLASVRLC---LQRQGPRSYFSQDAIVPSPW 212
>SB_46101| Best HMM Match : Lactamase_B (HMM E-Value=0.11)
Length = 157
Score = 28.7 bits (61), Expect = 4.5
Identities = 14/50 (28%), Positives = 25/50 (50%)
Frame = +2
Query: 173 GSLALYDSSSDVIELTPSNFDKLVTNSAKFGSLSSLHRGVDIVKALFPNI 322
GS+ALY+ S + +D ++ + F +LS +KAL P++
Sbjct: 106 GSIALYEEESKTLFSGDIIYDGMIIDWLPFSNLSDYTNSCQTLKALAPSV 155
>SB_49098| Best HMM Match : Peptidase_M14 (HMM E-Value=4.5e-12)
Length = 290
Score = 28.3 bits (60), Expect = 6.0
Identities = 12/38 (31%), Positives = 22/38 (57%)
Frame = +1
Query: 244 YKFREIWIIEFFAPWCGHCKSLVPEYKKAARALKGIVK 357
+ + ++W+ +PW G K P Y++ ARA+ +VK
Sbjct: 46 HSYGQLWM----SPW-GFTKKFPPNYRRHARAMNAVVK 78
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,905,150
Number of Sequences: 59808
Number of extensions: 424217
Number of successful extensions: 933
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 800
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 910
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1733301648
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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