Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060987.seq
(656 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X13382-1|CAA31759.1| 407|Drosophila melanogaster protein ( Dros... 125 6e-29
BT025959-1|ABG02203.1| 233|Drosophila melanogaster IP15855p pro... 125 6e-29
AY069485-1|AAL39630.1| 401|Drosophila melanogaster LD21756p pro... 125 6e-29
AE014297-4196|AAG22173.1| 401|Drosophila melanogaster CG5502-PA... 125 6e-29
X06881-1|CAA29998.1| 123|Drosophila melanogaster protein ( Dros... 121 1e-27
AY113210-1|AAM29215.1| 872|Drosophila melanogaster AT06220p pro... 31 1.8
AE014296-2188|AAF49882.2| 271|Drosophila melanogaster CG17666-P... 31 1.8
AE014296-2187|AAN11857.1| 872|Drosophila melanogaster CG17666-P... 31 1.8
AY122259-1|AAM52771.1| 2176|Drosophila melanogaster SD09011p pro... 30 2.4
AL009192-2|CAA15686.1| 2342|Drosophila melanogaster EG:133E12.4 ... 30 2.4
AF242291-1|AAF63753.1| 2362|Drosophila melanogaster nuclear prot... 30 2.4
AE014298-308|AAF45704.2| 2301|Drosophila melanogaster CG4399-PB ... 30 2.4
BT021357-1|AAX33505.1| 1953|Drosophila melanogaster LP14866p pro... 29 4.2
AE014298-1786|AAF48179.2| 2528|Drosophila melanogaster CG32654-P... 29 4.2
AE014296-3604|AAF51767.2| 706|Drosophila melanogaster CG32447-P... 28 9.7
>X13382-1|CAA31759.1| 407|Drosophila melanogaster protein (
Drosophila melanogastermRNA for put. ribosomal protein
L1. ).
Length = 407
Score = 125 bits (301), Expect = 6e-29
Identities = 58/94 (61%), Positives = 63/94 (67%)
Frame = +3
Query: 255 AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXX 434
AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK +RRWH
Sbjct: 61 AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTFRRWHRKVNV 120
Query: 435 XXXXXXXXXXXXXPASQRXVQARGQLLKRFPSFP 536
VQ++G ++ FP
Sbjct: 121 NQRRYALVSAIAASGVPALVQSKGHVIDGVSEFP 154
Score = 72.5 bits (170), Expect = 5e-13
Identities = 38/68 (55%), Positives = 47/68 (69%)
Frame = +2
Query: 452 LGGSVAATGVPALRSG*RTIIEKIPELPLVVADKVQXINKXKQAVIFLRRLXAXTDILKV 631
L ++AA+GVPAL +I+ + E PLVV+D+VQ + K KQAVIFLRRL DI KV
Sbjct: 127 LVSAIAASGVPALVQSKGHVIDGVSEFPLVVSDEVQKVQKTKQAVIFLRRLKIWADIQKV 186
Query: 632 YKS*RLRA 655
YKS R RA
Sbjct: 187 YKSQRFRA 194
Score = 72.1 bits (169), Expect = 6e-13
Identities = 35/59 (59%), Positives = 44/59 (74%)
Frame = +1
Query: 76 MSLSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSK 252
MSL ARPLVSVY+EK+E + LP VFKAPIRPD+VN+VH + +N+RQ Y VS+
Sbjct: 1 MSLGNARPLVSVYTEKNEPAKDKNICLPAVFKAPIRPDVVNEVHQLLRRNNRQAYAVSE 59
>BT025959-1|ABG02203.1| 233|Drosophila melanogaster IP15855p
protein.
Length = 233
Score = 125 bits (301), Expect = 6e-29
Identities = 58/94 (61%), Positives = 63/94 (67%)
Frame = +3
Query: 255 AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXX 434
AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK +RRWH
Sbjct: 61 AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTFRRWHRKVNV 120
Query: 435 XXXXXXXXXXXXXPASQRXVQARGQLLKRFPSFP 536
VQ++G ++ FP
Sbjct: 121 NQRRYALVSAIAASGVPALVQSKGHVIDGVSEFP 154
Score = 72.5 bits (170), Expect = 5e-13
Identities = 38/68 (55%), Positives = 47/68 (69%)
Frame = +2
Query: 452 LGGSVAATGVPALRSG*RTIIEKIPELPLVVADKVQXINKXKQAVIFLRRLXAXTDILKV 631
L ++AA+GVPAL +I+ + E PLVV+D+VQ + K KQAVIFLRRL DI KV
Sbjct: 127 LVSAIAASGVPALVQSKGHVIDGVSEFPLVVSDEVQKVQKTKQAVIFLRRLKIWADIQKV 186
Query: 632 YKS*RLRA 655
YKS R RA
Sbjct: 187 YKSQRFRA 194
Score = 72.1 bits (169), Expect = 6e-13
Identities = 35/59 (59%), Positives = 44/59 (74%)
Frame = +1
Query: 76 MSLSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSK 252
MSL ARPLVSVY+EK+E + LP VFKAPIRPD+VN+VH + +N+RQ Y VS+
Sbjct: 1 MSLGNARPLVSVYTEKNEPAKDKNICLPAVFKAPIRPDVVNEVHQLLRRNNRQAYAVSE 59
>AY069485-1|AAL39630.1| 401|Drosophila melanogaster LD21756p
protein.
Length = 401
Score = 125 bits (301), Expect = 6e-29
Identities = 58/94 (61%), Positives = 63/94 (67%)
Frame = +3
Query: 255 AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXX 434
AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK +RRWH
Sbjct: 61 AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTFRRWHRKVNV 120
Query: 435 XXXXXXXXXXXXXPASQRXVQARGQLLKRFPSFP 536
VQ++G ++ FP
Sbjct: 121 NQRRYALVSAIAASGVPALVQSKGHVIDGVSEFP 154
Score = 72.5 bits (170), Expect = 5e-13
Identities = 38/68 (55%), Positives = 47/68 (69%)
Frame = +2
Query: 452 LGGSVAATGVPALRSG*RTIIEKIPELPLVVADKVQXINKXKQAVIFLRRLXAXTDILKV 631
L ++AA+GVPAL +I+ + E PLVV+D+VQ + K KQAVIFLRRL DI KV
Sbjct: 127 LVSAIAASGVPALVQSKGHVIDGVSEFPLVVSDEVQKVQKTKQAVIFLRRLKIWADIQKV 186
Query: 632 YKS*RLRA 655
YKS R RA
Sbjct: 187 YKSQRFRA 194
Score = 72.1 bits (169), Expect = 6e-13
Identities = 35/59 (59%), Positives = 44/59 (74%)
Frame = +1
Query: 76 MSLSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSK 252
MSL ARPLVSVY+EK+E + LP VFKAPIRPD+VN+VH + +N+RQ Y VS+
Sbjct: 1 MSLGNARPLVSVYTEKNEPAKDKNICLPAVFKAPIRPDVVNEVHQLLRRNNRQAYAVSE 59
>AE014297-4196|AAG22173.1| 401|Drosophila melanogaster CG5502-PA
protein.
Length = 401
Score = 125 bits (301), Expect = 6e-29
Identities = 58/94 (61%), Positives = 63/94 (67%)
Frame = +3
Query: 255 AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXX 434
AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK +RRWH
Sbjct: 61 AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTFRRWHRKVNV 120
Query: 435 XXXXXXXXXXXXXPASQRXVQARGQLLKRFPSFP 536
VQ++G ++ FP
Sbjct: 121 NQRRYALVSAIAASGVPALVQSKGHVIDGVSEFP 154
Score = 72.5 bits (170), Expect = 5e-13
Identities = 38/68 (55%), Positives = 47/68 (69%)
Frame = +2
Query: 452 LGGSVAATGVPALRSG*RTIIEKIPELPLVVADKVQXINKXKQAVIFLRRLXAXTDILKV 631
L ++AA+GVPAL +I+ + E PLVV+D+VQ + K KQAVIFLRRL DI KV
Sbjct: 127 LVSAIAASGVPALVQSKGHVIDGVSEFPLVVSDEVQKVQKTKQAVIFLRRLKIWADIQKV 186
Query: 632 YKS*RLRA 655
YKS R RA
Sbjct: 187 YKSQRFRA 194
Score = 72.1 bits (169), Expect = 6e-13
Identities = 35/59 (59%), Positives = 44/59 (74%)
Frame = +1
Query: 76 MSLSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSK 252
MSL ARPLVSVY+EK+E + LP VFKAPIRPD+VN+VH + +N+RQ Y VS+
Sbjct: 1 MSLGNARPLVSVYTEKNEPAKDKNICLPAVFKAPIRPDVVNEVHQLLRRNNRQAYAVSE 59
>X06881-1|CAA29998.1| 123|Drosophila melanogaster protein (
Drosophila gene forribosomal protein L1 fragment. ).
Length = 123
Score = 121 bits (291), Expect = 1e-27
Identities = 56/92 (60%), Positives = 61/92 (66%)
Frame = +3
Query: 261 HQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXX 440
HQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK +RRWH
Sbjct: 1 HQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTFRRWHRRVNVNQ 60
Query: 441 XXXXXXXXXXXPASQRXVQARGQLLKRFPSFP 536
VQ++G ++ FP
Sbjct: 61 RRYALVSAIAASGVPALVQSKGHVIDGVSEFP 92
Score = 60.5 bits (140), Expect = 2e-09
Identities = 31/59 (52%), Positives = 40/59 (67%)
Frame = +2
Query: 452 LGGSVAATGVPALRSG*RTIIEKIPELPLVVADKVQXINKXKQAVIFLRRLXAXTDILK 628
L ++AA+GVPAL +I+ + E PLVV+D+VQ + K KQAVIFLRRL DI K
Sbjct: 65 LVSAIAASGVPALVQSKGHVIDGVSEFPLVVSDEVQKVQKTKQAVIFLRRLKIWADIQK 123
>AY113210-1|AAM29215.1| 872|Drosophila melanogaster AT06220p
protein.
Length = 872
Score = 30.7 bits (66), Expect = 1.8
Identities = 11/22 (50%), Positives = 14/22 (63%), Gaps = 1/22 (4%)
Frame = +2
Query: 293 TCCRP-NSACPWWWYS*VRSGC 355
TCC P ++ CPW WY +GC
Sbjct: 718 TCCMPCSNQCPWSWYYNPCTGC 739
>AE014296-2188|AAF49882.2| 271|Drosophila melanogaster CG17666-PB,
isoform B protein.
Length = 271
Score = 30.7 bits (66), Expect = 1.8
Identities = 11/22 (50%), Positives = 14/22 (63%), Gaps = 1/22 (4%)
Frame = +2
Query: 293 TCCRP-NSACPWWWYS*VRSGC 355
TCC P ++ CPW WY +GC
Sbjct: 117 TCCMPCSNQCPWSWYYNPCTGC 138
>AE014296-2187|AAN11857.1| 872|Drosophila melanogaster CG17666-PA,
isoform A protein.
Length = 872
Score = 30.7 bits (66), Expect = 1.8
Identities = 11/22 (50%), Positives = 14/22 (63%), Gaps = 1/22 (4%)
Frame = +2
Query: 293 TCCRP-NSACPWWWYS*VRSGC 355
TCC P ++ CPW WY +GC
Sbjct: 718 TCCMPCSNQCPWSWYYNPCTGC 739
>AY122259-1|AAM52771.1| 2176|Drosophila melanogaster SD09011p protein.
Length = 2176
Score = 30.3 bits (65), Expect = 2.4
Identities = 16/44 (36%), Positives = 21/44 (47%)
Frame = +3
Query: 249 QGAGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGG 380
+G G T ES GT + V ++ R GG SG G + GG
Sbjct: 918 RGGGSATHVESSGTLKTVIKLNRSSNGGVSGSGGLPTGTVIHGG 961
>AL009192-2|CAA15686.1| 2342|Drosophila melanogaster EG:133E12.4
protein.
Length = 2342
Score = 30.3 bits (65), Expect = 2.4
Identities = 16/44 (36%), Positives = 21/44 (47%)
Frame = +3
Query: 249 QGAGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGG 380
+G G T ES GT + V ++ R GG SG G + GG
Sbjct: 1042 RGGGSATHVESSGTLKTVIKLNRSSNGGVSGSGGLPTGTVIHGG 1085
>AF242291-1|AAF63753.1| 2362|Drosophila melanogaster nuclear protein
EAST protein.
Length = 2362
Score = 30.3 bits (65), Expect = 2.4
Identities = 16/44 (36%), Positives = 21/44 (47%)
Frame = +3
Query: 249 QGAGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGG 380
+G G T ES GT + V ++ R GG SG G + GG
Sbjct: 1095 RGGGSATHVESSGTLKTVIKLNRSSNGGVSGSGGLPTGTVIHGG 1138
>AE014298-308|AAF45704.2| 2301|Drosophila melanogaster CG4399-PB
protein.
Length = 2301
Score = 30.3 bits (65), Expect = 2.4
Identities = 16/44 (36%), Positives = 21/44 (47%)
Frame = +3
Query: 249 QGAGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGG 380
+G G T ES GT + V ++ R GG SG G + GG
Sbjct: 1042 RGGGSATHVESSGTLKTVIKLNRSSNGGVSGSGGLPTGTVIHGG 1085
>BT021357-1|AAX33505.1| 1953|Drosophila melanogaster LP14866p
protein.
Length = 1953
Score = 29.5 bits (63), Expect = 4.2
Identities = 16/40 (40%), Positives = 21/40 (52%), Gaps = 2/40 (5%)
Frame = +3
Query: 81 SIGSPTFSVGVFREE*DGAGCSQAPPVRVQG--AHPSGPG 194
++GSP ++VG G G S APP V AH +G G
Sbjct: 287 AVGSPIYAVGASSAHSAGVGASPAPPTGVVAPPAHLAGIG 326
>AE014298-1786|AAF48179.2| 2528|Drosophila melanogaster CG32654-PC
protein.
Length = 2528
Score = 29.5 bits (63), Expect = 4.2
Identities = 16/40 (40%), Positives = 21/40 (52%), Gaps = 2/40 (5%)
Frame = +3
Query: 81 SIGSPTFSVGVFREE*DGAGCSQAPPVRVQG--AHPSGPG 194
++GSP ++VG G G S APP V AH +G G
Sbjct: 287 AVGSPIYAVGASSAHSAGVGASPAPPTGVVAPPAHLAGIG 326
>AE014296-3604|AAF51767.2| 706|Drosophila melanogaster CG32447-PA,
isoform A protein.
Length = 706
Score = 28.3 bits (60), Expect = 9.7
Identities = 19/67 (28%), Positives = 29/67 (43%)
Frame = +3
Query: 183 SGPGQ*CSRFYVQELEAALLREQGAGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFG 362
+G G S F+ + ++ ++ G G SA + G G + GG GQG
Sbjct: 488 AGSGYSPSFFHFKPIKYGVM--SGCGLPNSASNTGQGLSSKHCSSANNGGEPDYGQGKSN 545
Query: 363 NMCRGGR 383
N+ R GR
Sbjct: 546 NLWRCGR 552
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,578,358
Number of Sequences: 53049
Number of extensions: 636630
Number of successful extensions: 3688
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 2635
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3550
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2806815600
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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