Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060986.seq
(686 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY051458-1|AAK92882.1| 459|Drosophila melanogaster GH13040p pro... 113 2e-25
AE013599-1044|AAM68775.1| 459|Drosophila melanogaster CG12214-P... 113 2e-25
AE013599-1043|AAF58828.1| 459|Drosophila melanogaster CG12214-P... 113 2e-25
BT015221-1|AAT94450.1| 1216|Drosophila melanogaster RE35187p pro... 31 2.0
AY069236-1|AAL39381.1| 1150|Drosophila melanogaster GH28327p pro... 31 2.0
AE013599-1707|AAM68575.1| 1360|Drosophila melanogaster CG17034-P... 31 2.0
AE013599-1706|AAM68574.1| 1360|Drosophila melanogaster CG17034-P... 31 2.0
AE013599-1705|AAF58378.2| 1235|Drosophila melanogaster CG17034-P... 31 2.0
AE013599-1704|AAM68573.1| 1150|Drosophila melanogaster CG17034-P... 31 2.0
AF318283-1|AAK06752.1| 431|Drosophila melanogaster rhomboid-2 p... 29 7.9
>AY051458-1|AAK92882.1| 459|Drosophila melanogaster GH13040p
protein.
Length = 459
Score = 113 bits (273), Expect = 2e-25
Identities = 49/78 (62%), Positives = 64/78 (82%)
Frame = +2
Query: 17 AERAFIRYYMEKPEADRPDRYWELVHVHGKLDPLVSVDLRPEKRVQITFTCGDTSEVRTV 196
+ERAF+RYYM+KPE +RP RY EL+ +HGKLDPLV+V L+P+KRV++ FT D SE R V
Sbjct: 335 SERAFVRYYMDKPEEERPARYQELLQIHGKLDPLVNVSLKPDKRVKVLFTYNDVSESRFV 394
Query: 197 DVYRTVSDLKTRLERLAG 250
D+Y TV+DLK +LE+L G
Sbjct: 395 DIYLTVNDLKVKLEKLVG 412
Score = 71.7 bits (168), Expect = 9e-13
Identities = 34/56 (60%), Positives = 44/56 (78%)
Frame = +1
Query: 223 KNKIGAVSWLPAAKMRLFYVDQELRDTQGPEEMKYPTKQLYSYNIRSGDEIIIDSK 390
K K+ + L KMRL+Y+DQ+ ++ GPEEM+YP KQLYSYNI+SGDEIIID+K
Sbjct: 404 KVKLEKLVGLAPNKMRLYYLDQDYKEF-GPEEMRYPNKQLYSYNIQSGDEIIIDAK 458
>AE013599-1044|AAM68775.1| 459|Drosophila melanogaster CG12214-PB,
isoform B protein.
Length = 459
Score = 113 bits (273), Expect = 2e-25
Identities = 49/78 (62%), Positives = 64/78 (82%)
Frame = +2
Query: 17 AERAFIRYYMEKPEADRPDRYWELVHVHGKLDPLVSVDLRPEKRVQITFTCGDTSEVRTV 196
+ERAF+RYYM+KPE +RP RY EL+ +HGKLDPLV+V L+P+KRV++ FT D SE R V
Sbjct: 335 SERAFVRYYMDKPEEERPARYQELLQIHGKLDPLVNVSLKPDKRVKVLFTYNDVSESRFV 394
Query: 197 DVYRTVSDLKTRLERLAG 250
D+Y TV+DLK +LE+L G
Sbjct: 395 DIYLTVNDLKVKLEKLVG 412
Score = 71.7 bits (168), Expect = 9e-13
Identities = 34/56 (60%), Positives = 44/56 (78%)
Frame = +1
Query: 223 KNKIGAVSWLPAAKMRLFYVDQELRDTQGPEEMKYPTKQLYSYNIRSGDEIIIDSK 390
K K+ + L KMRL+Y+DQ+ ++ GPEEM+YP KQLYSYNI+SGDEIIID+K
Sbjct: 404 KVKLEKLVGLAPNKMRLYYLDQDYKEF-GPEEMRYPNKQLYSYNIQSGDEIIIDAK 458
>AE013599-1043|AAF58828.1| 459|Drosophila melanogaster CG12214-PA,
isoform A protein.
Length = 459
Score = 113 bits (273), Expect = 2e-25
Identities = 49/78 (62%), Positives = 64/78 (82%)
Frame = +2
Query: 17 AERAFIRYYMEKPEADRPDRYWELVHVHGKLDPLVSVDLRPEKRVQITFTCGDTSEVRTV 196
+ERAF+RYYM+KPE +RP RY EL+ +HGKLDPLV+V L+P+KRV++ FT D SE R V
Sbjct: 335 SERAFVRYYMDKPEEERPARYQELLQIHGKLDPLVNVSLKPDKRVKVLFTYNDVSESRFV 394
Query: 197 DVYRTVSDLKTRLERLAG 250
D+Y TV+DLK +LE+L G
Sbjct: 395 DIYLTVNDLKVKLEKLVG 412
Score = 71.7 bits (168), Expect = 9e-13
Identities = 34/56 (60%), Positives = 44/56 (78%)
Frame = +1
Query: 223 KNKIGAVSWLPAAKMRLFYVDQELRDTQGPEEMKYPTKQLYSYNIRSGDEIIIDSK 390
K K+ + L KMRL+Y+DQ+ ++ GPEEM+YP KQLYSYNI+SGDEIIID+K
Sbjct: 404 KVKLEKLVGLAPNKMRLYYLDQDYKEF-GPEEMRYPNKQLYSYNIQSGDEIIIDAK 458
>BT015221-1|AAT94450.1| 1216|Drosophila melanogaster RE35187p
protein.
Length = 1216
Score = 30.7 bits (66), Expect = 2.0
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = +3
Query: 51 SQRPIDRIDTGSWCTCTASSIRWCPWTCG 137
+ R I+R+D+GSWCT +RW T G
Sbjct: 262 NHRSIERLDSGSWCT-----VRWSELTVG 285
>AY069236-1|AAL39381.1| 1150|Drosophila melanogaster GH28327p
protein.
Length = 1150
Score = 30.7 bits (66), Expect = 2.0
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = +3
Query: 51 SQRPIDRIDTGSWCTCTASSIRWCPWTCG 137
+ R I+R+D+GSWCT +RW T G
Sbjct: 137 NHRSIERLDSGSWCT-----VRWSELTVG 160
>AE013599-1707|AAM68575.1| 1360|Drosophila melanogaster CG17034-PC,
isoform C protein.
Length = 1360
Score = 30.7 bits (66), Expect = 2.0
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = +3
Query: 51 SQRPIDRIDTGSWCTCTASSIRWCPWTCG 137
+ R I+R+D+GSWCT +RW T G
Sbjct: 262 NHRSIERLDSGSWCT-----VRWSELTVG 285
>AE013599-1706|AAM68574.1| 1360|Drosophila melanogaster CG17034-PB,
isoform B protein.
Length = 1360
Score = 30.7 bits (66), Expect = 2.0
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = +3
Query: 51 SQRPIDRIDTGSWCTCTASSIRWCPWTCG 137
+ R I+R+D+GSWCT +RW T G
Sbjct: 262 NHRSIERLDSGSWCT-----VRWSELTVG 285
>AE013599-1705|AAF58378.2| 1235|Drosophila melanogaster CG17034-PA,
isoform A protein.
Length = 1235
Score = 30.7 bits (66), Expect = 2.0
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = +3
Query: 51 SQRPIDRIDTGSWCTCTASSIRWCPWTCG 137
+ R I+R+D+GSWCT +RW T G
Sbjct: 137 NHRSIERLDSGSWCT-----VRWSELTVG 160
>AE013599-1704|AAM68573.1| 1150|Drosophila melanogaster CG17034-PD,
isoform D protein.
Length = 1150
Score = 30.7 bits (66), Expect = 2.0
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = +3
Query: 51 SQRPIDRIDTGSWCTCTASSIRWCPWTCG 137
+ R I+R+D+GSWCT +RW T G
Sbjct: 137 NHRSIERLDSGSWCT-----VRWSELTVG 160
>AF318283-1|AAK06752.1| 431|Drosophila melanogaster rhomboid-2
protein.
Length = 431
Score = 28.7 bits (61), Expect = 7.9
Identities = 11/30 (36%), Positives = 18/30 (60%)
Frame = -3
Query: 315 FGTLRISQFLVHVKEPHLRSRKPANRSNLV 226
FG + + +FLV +K P S+ P N+ L+
Sbjct: 48 FGEISVEEFLVALKSPEFLSQVPMNKRELL 77
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,160,003
Number of Sequences: 53049
Number of extensions: 544982
Number of successful extensions: 1509
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1358
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1506
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 3013199100
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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