Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060986.seq
         (686 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At4g31590.1 68417.m04487 glycosyl transferase family 2 protein s...    31   0.95 
At2g24630.1 68415.m02942 glycosyl transferase family 2 protein s...    30   1.3  
At3g11460.1 68416.m01397 pentatricopeptide (PPR) repeat-containi...    28   6.7  
At1g20970.1 68414.m02625 adhesin-related contains TIGRFAM TIGR01...    28   6.7  
At5g24070.1 68418.m02827 peroxidase family protein similar to ca...    27   8.8  

>At4g31590.1 68417.m04487 glycosyl transferase family 2 protein
           similar to cellulose synthase from Agrobacterium
           tumeficiens [gi:710492] and Agrobacterium radiobacter
           [gi:710493]; contains Pfam glycosyl transferase, group 2
           family protein domain PF00535
          Length = 692

 Score = 30.7 bits (66), Expect = 0.95
 Identities = 18/70 (25%), Positives = 35/70 (50%), Gaps = 2/70 (2%)
 Frame = -1

Query: 515 IFLKFQVTAFCQGWRYIKFPIYRLPTLP-SVQAV-ELADIECFSFESMMISSPDLMLYEY 342
           + L F++ A+ +GW Y + P   +PT    +Q++  L  +   +  +  I+ P   L ++
Sbjct: 119 VILGFEIVAYFRGWHYFQSPSLHIPTSTLEIQSLFHLVYVGWLTLRADYIAPPIKALSKF 178

Query: 341 SCFVGYFISS 312
            C V + I S
Sbjct: 179 -CIVLFLIQS 187


>At2g24630.1 68415.m02942 glycosyl transferase family 2 protein
           similar to cellulose synthase from Agrobacterium
           tumeficiens [gi:710492] and Agrobacterium radiobacter
           [gi:710493]; contains Pfam glycosyl transferase, group 2
           family protein domain PF00535
          Length = 690

 Score = 30.3 bits (65), Expect = 1.3
 Identities = 19/68 (27%), Positives = 32/68 (47%), Gaps = 2/68 (2%)
 Frame = -1

Query: 509 LKFQVTAFCQGWRYIKFPIYRLPT--LPSVQAVELADIECFSFESMMISSPDLMLYEYSC 336
           L F++ A+ +GW Y K P   +PT  L     + L  +   S  +  I+ P   L ++ C
Sbjct: 121 LAFELVAYYRGWHYFKNPNLHIPTSKLEIQSLLHLFYVGWLSLRADYIAPPIKALSKF-C 179

Query: 335 FVGYFISS 312
            V + + S
Sbjct: 180 IVLFLVQS 187


>At3g11460.1 68416.m01397 pentatricopeptide (PPR) repeat-containing
           protein contains Pfam profile PF01535: PPR repeat
          Length = 623

 Score = 27.9 bits (59), Expect = 6.7
 Identities = 12/30 (40%), Positives = 19/30 (63%)
 Frame = +2

Query: 161 FTCGDTSEVRTVDVYRTVSDLKTRLERLAG 250
           F  GD S  +T +V+R + +L+T +  LAG
Sbjct: 509 FLAGDRSHEQTEEVHRMLDELETSVMELAG 538


>At1g20970.1 68414.m02625 adhesin-related contains TIGRFAM TIGR01612:
            reticulocyte binding protein; contains TIGRFAM TIGR00864:
            polycystin cation channel protein; similar to
            fimbriae-associated protein Fap1 [Streptococcus
            parasanguinis] (GI:3929312)
          Length = 1498

 Score = 27.9 bits (59), Expect = 6.7
 Identities = 12/38 (31%), Positives = 24/38 (63%)
 Frame = -2

Query: 631  FNYKDKCRVLSEMSLKQNKISLLDVSNLILFSFIKVGN 518
            F Y+D  R  SEM+LK+++ +L  + +  + +F+ + N
Sbjct: 1042 FKYRDNSRAASEMALKKDRAALQSLCSDQVENFMNMWN 1079


>At5g24070.1 68418.m02827 peroxidase family protein similar to
           cationic peroxidase, Peanut [Arachis hypogaea]
           GP|166475|gb|AAA32676; contains Pfam profile PF00141:
           Peroxidase
          Length = 340

 Score = 27.5 bits (58), Expect = 8.8
 Identities = 11/28 (39%), Positives = 18/28 (64%)
 Frame = +3

Query: 234 WSG*LASGCEDAALLRGPRTERYAGSRR 317
           +S  + +GC+ + LL+GP +ER A   R
Sbjct: 76  YSDCMVNGCDGSILLQGPNSERTAPQNR 103


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,630,343
Number of Sequences: 28952
Number of extensions: 258472
Number of successful extensions: 661
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 650
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 661
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1457719448
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)