Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060984.seq
         (686 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    23   1.8  
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    21   7.2  
AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory recept...    21   7.2  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 14/30 (46%), Positives = 17/30 (56%), Gaps = 3/30 (10%)
 Frame = -2

Query: 685 FKYLFTIL---YYIYNYCFLLFTCL*KFIL 605
           F Y F IL   YY Y Y F++FT    F+L
Sbjct: 103 FYYAFIILLCVYYFY-YAFIIFTVHLLFLL 131


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 11/41 (26%), Positives = 19/41 (46%)
 Frame = +1

Query: 385 ETSIKTTIFMNDXSMFLSSFTIYINFFLRIHTKGFFKQTVH 507
           +T +KTT+       F+ +   + N FL      F + T+H
Sbjct: 392 KTVLKTTMSTFSDITFMRTVWKFFNIFLITPFYNFNENTIH 432


>AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory receptor
           candidate 33 protein.
          Length = 321

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 8/26 (30%), Positives = 15/26 (57%)
 Frame = -2

Query: 664 LYYIYNYCFLLFTCL*KFIL*KLITQ 587
           L +I NYC  L+ C    +L  ++++
Sbjct: 135 LSFIENYCQFLYNCFHSTLLLMILSR 160


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 143,365
Number of Sequences: 336
Number of extensions: 2875
Number of successful extensions: 5
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18010165
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)