Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060984.seq
         (686 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein.    23   6.8  
AF515521-1|AAM61888.1|  233|Anopheles gambiae glutathione S-tran...    23   6.8  
AY135184-1|AAN17505.1| 1009|Anopheles gambiae laccase 1 protein.       23   9.0  

>AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein.
          Length = 1187

 Score = 23.4 bits (48), Expect = 6.8
 Identities = 12/32 (37%), Positives = 17/32 (53%)
 Frame = +1

Query: 13  ESVRYGDAHHIEQYRVSADIEI*ISIHESVRY 108
           E +R    H+IE  +V  DIE    ++ S RY
Sbjct: 208 EKLRKEREHYIEFQKVCRDIEYLTRLYVSYRY 239


>AF515521-1|AAM61888.1|  233|Anopheles gambiae glutathione
           S-transferase u1 protein.
          Length = 233

 Score = 23.4 bits (48), Expect = 6.8
 Identities = 14/46 (30%), Positives = 24/46 (52%), Gaps = 2/46 (4%)
 Frame = +1

Query: 4   HEHESVRYGDAHHI--EQYRVSADIEI*ISIHESVRYGDAHHIEQY 135
           +EH SV YG A H+  E  +++   EI +   +     +++ I QY
Sbjct: 26  YEHVSVDYGKAEHLTAEYEKMNPQKEIPVLDDDGFFLSESNAILQY 71


>AY135184-1|AAN17505.1| 1009|Anopheles gambiae laccase 1 protein.
          Length = 1009

 Score = 23.0 bits (47), Expect = 9.0
 Identities = 9/36 (25%), Positives = 16/36 (44%)
 Frame = -1

Query: 116 ASPYRTDS*IEIYISISADTRYCSM*CASPYRTDSC 9
           ASP   +  ++ Y  +S D   C   C    + ++C
Sbjct: 267 ASPVEPEEGVDFYEELSYDNHPCKRACTLGRKPETC 302


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 634,417
Number of Sequences: 2352
Number of extensions: 11582
Number of successful extensions: 17
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 69413730
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)