Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060982.seq
(682 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q9GZJ8 Cluster: Mre11; n=1; Bombyx mori|Rep: Mre11 - Bo... 178 9e-44
UniRef50_Q54BN2 Cluster: DNA repair exonuclease; n=1; Dictyostel... 111 2e-23
UniRef50_Q9XYZ4 Cluster: CG16928-PA; n=5; Diptera|Rep: CG16928-P... 108 1e-22
UniRef50_UPI00015B5FB8 Cluster: PREDICTED: similar to meiotic re... 106 4e-22
UniRef50_UPI0000D566D3 Cluster: PREDICTED: similar to CG16928-PA... 104 2e-21
UniRef50_P49959 Cluster: Double-strand break repair protein MRE1... 99 5e-20
UniRef50_UPI0000DB6F19 Cluster: PREDICTED: similar to meiotic re... 100 7e-20
UniRef50_A7SIW1 Cluster: Predicted protein; n=1; Nematostella ve... 97 3e-19
UniRef50_Q9XGM2 Cluster: Double-strand break repair protein MRE1... 94 3e-18
UniRef50_Q09683 Cluster: DNA repair protein rad32; n=1; Schizosa... 93 4e-18
UniRef50_Q9UVN9 Cluster: Double-strand break repair protein MRE1... 91 2e-17
UniRef50_Q4P5A9 Cluster: Putative uncharacterized protein; n=1; ... 91 2e-17
UniRef50_A1CU25 Cluster: Meiotic recombination protein Mre11; n=... 91 2e-17
UniRef50_A5E785 Cluster: Putative uncharacterized protein; n=1; ... 90 4e-17
UniRef50_Q9C291 Cluster: Double-strand break repair protein mus-... 89 9e-17
UniRef50_Q6BL74 Cluster: Debaryomyces hansenii chromosome F of s... 89 1e-16
UniRef50_Q586P4 Cluster: Endo/exonuclease Mre11; n=3; Trypanosom... 88 2e-16
UniRef50_Q5KHA6 Cluster: Meiotic DNA double-strand break process... 87 5e-16
UniRef50_Q6ZBS2 Cluster: Putative DNA repair and meiosis protein... 84 3e-15
UniRef50_P32829 Cluster: Double-strand break repair protein MRE1... 80 4e-14
UniRef50_UPI00015B5FB6 Cluster: PREDICTED: similar to endo/exonu... 78 2e-13
UniRef50_Q23255 Cluster: Double-strand break repair protein mre-... 77 3e-13
UniRef50_A4HFW3 Cluster: Endo/exonuclease Mre11, putative; n=5; ... 77 5e-13
UniRef50_Q6CEM3 Cluster: Yarrowia lipolytica chromosome B of str... 77 5e-13
UniRef50_Q016A4 Cluster: Mre11 protein; n=3; Ostreococcus|Rep: M... 76 9e-13
UniRef50_A5YZR9 Cluster: MRE11B; n=2; Magnoliophyta|Rep: MRE11B ... 76 9e-13
UniRef50_A5DLP0 Cluster: Putative uncharacterized protein; n=1; ... 75 2e-12
UniRef50_A3FQD2 Cluster: DNA repair and meiosis protein Mre11; n... 67 3e-10
UniRef50_Q0MR25 Cluster: MRE11-like protein; n=1; Penicillium ma... 64 3e-09
UniRef50_Q8SRV0 Cluster: DOUBLE-STRAND BREAK DNA REPAIR PROTEIN;... 62 1e-08
UniRef50_UPI000049A054 Cluster: DNA repair protein rad32; n=1; E... 59 1e-07
UniRef50_Q22G12 Cluster: Ser/Thr protein phosphatase family prot... 56 8e-07
UniRef50_Q86C23 Cluster: Mre11; n=2; Entamoeba histolytica|Rep: ... 53 6e-06
UniRef50_A2ECB0 Cluster: Ser/Thr protein phosphatase, putative; ... 50 5e-05
UniRef50_Q7RBG7 Cluster: Rad32-related; n=6; Plasmodium (Vinckei... 50 7e-05
UniRef50_A0DUM4 Cluster: Chromosome undetermined scaffold_64, wh... 49 9e-05
UniRef50_A5K9T7 Cluster: DNA repair exonuclease, putative; n=1; ... 48 2e-04
UniRef50_Q4U965 Cluster: Double-strand break repair protein, put... 47 5e-04
UniRef50_Q8I263 Cluster: DNA repair exonuclease, putative; n=1; ... 46 9e-04
UniRef50_A7AP02 Cluster: DNA repair protein (Mre11) family prote... 46 0.001
UniRef50_Q22P75 Cluster: Putative uncharacterized protein; n=1; ... 34 2.8
UniRef50_UPI000038DC4A Cluster: COG1205: Distinct helicase famil... 33 4.9
UniRef50_Q2S4Q6 Cluster: Nuclease SbcCD, D subunit subfamily, pu... 33 6.4
UniRef50_Q46FJ9 Cluster: DNA repair protein; n=1; Methanosarcina... 33 6.4
UniRef50_Q0E553 Cluster: 64.6 kDa; n=2; Spodoptera frugiperda as... 33 8.5
UniRef50_Q21FY1 Cluster: Aminoglycoside phosphotransferase; n=1;... 33 8.5
>UniRef50_Q9GZJ8 Cluster: Mre11; n=1; Bombyx mori|Rep: Mre11 -
Bombyx mori (Silk moth)
Length = 610
Score = 178 bits (434), Expect = 9e-44
Identities = 94/138 (68%), Positives = 97/138 (70%)
Frame = +2
Query: 257 DQAKPSVNXMFKCTEIIRKYCLGDKPVSIELLSDQIKNXSRTVNYEDPNLNISYPILSIH 436
DQAKPSVN MFKCTEIIRKYCLGDKPVSIELLSDQIKN SRTVNYEDPNLNISYPILSIH
Sbjct: 65 DQAKPSVNCMFKCTEIIRKYCLGDKPVSIELLSDQIKNFSRTVNYEDPNLNISYPILSIH 124
Query: 437 GNHDDPVGQGSVSSLDILSITGLVIILXNGPXTRTXEYHQXFCKKVLRGSPSMGLKPFKR 616
GNHDDPVGQGSVSSLDILSITGLV +K L GL K
Sbjct: 125 GNHDDPVGQGSVSSLDILSITGLVNYFGKWTDYTHVRISPVLLQKGLTRLALYGLSHLK- 183
Query: 617 SETFTSXLAEKKVGXXRP 670
+ + AEKKV RP
Sbjct: 184 DQRLSRLFAEKKVEMERP 201
Score = 112 bits (270), Expect = 7e-24
Identities = 53/54 (98%), Positives = 53/54 (98%)
Frame = +3
Query: 66 MIENDISAWSPXDTLRILIASDIHLGFMENDPVRGEDSFIAFEEVLSLAVQCDV 227
MIENDISAWSP DTLRILIASDIHLGFMENDPVRGEDSFIAFEEVLSLAVQCDV
Sbjct: 1 MIENDISAWSPDDTLRILIASDIHLGFMENDPVRGEDSFIAFEEVLSLAVQCDV 54
>UniRef50_Q54BN2 Cluster: DNA repair exonuclease; n=1; Dictyostelium
discoideum AX4|Rep: DNA repair exonuclease -
Dictyostelium discoideum AX4
Length = 689
Score = 111 bits (266), Expect = 2e-23
Identities = 50/84 (59%), Positives = 63/84 (75%), Gaps = 3/84 (3%)
Frame = +2
Query: 266 KPSVNXMFKCTEIIRKYCLGDKPVSIELLSDQIKNXSR---TVNYEDPNLNISYPILSIH 436
KPS + +++ E+ RKYCLGD PV I+ LSDQ N S TVNYEDPN NIS PI SIH
Sbjct: 96 KPSRSCLYRTMELFRKYCLGDSPVRIQFLSDQSVNFSNQFHTVNYEDPNFNISLPIFSIH 155
Query: 437 GNHDDPVGQGSVSSLDILSITGLV 508
GNHDDP G+G +++LD+LS++ LV
Sbjct: 156 GNHDDPTGEGGLAALDLLSVSNLV 179
Score = 53.6 bits (123), Expect = 4e-06
Identities = 21/35 (60%), Positives = 30/35 (85%)
Frame = +3
Query: 108 LRILIASDIHLGFMENDPVRGEDSFIAFEEVLSLA 212
+RIL+A+D HLG++E DP+RG+DSF +FEE+L A
Sbjct: 43 MRILVATDNHLGYLERDPIRGDDSFNSFEEILKYA 77
Score = 32.7 bits (71), Expect = 8.5
Identities = 21/68 (30%), Positives = 35/68 (51%), Gaps = 1/68 (1%)
Frame = +1
Query: 397 PQFEYFLP-YSLNTRQS**SRWPGQCEFS*YSLNHWVSXYFGKWTXYTHVRISPVLLQKG 573
P F LP +S++ + G S+++ V+ YFGK + + P+LL KG
Sbjct: 143 PNFNISLPIFSIHGNHDDPTGEGGLAALDLLSVSNLVN-YFGKTEDIDDITVYPLLLGKG 201
Query: 574 LTRLALYG 597
T++A+YG
Sbjct: 202 ETKIAIYG 209
>UniRef50_Q9XYZ4 Cluster: CG16928-PA; n=5; Diptera|Rep: CG16928-PA -
Drosophila melanogaster (Fruit fly)
Length = 620
Score = 108 bits (259), Expect = 1e-22
Identities = 51/86 (59%), Positives = 66/86 (76%), Gaps = 4/86 (4%)
Frame = +2
Query: 263 AKPSVNXMFKCTEIIRKYCLGDKPVSIELLSDQ---IKNX-SRTVNYEDPNLNISYPILS 430
A PS N + KC E++R+Y GD+PVS+E+LSDQ N +++VNYEDPNLNI+ P+ S
Sbjct: 67 AVPSQNALHKCIELLRRYTFGDRPVSLEILSDQGQCFHNAVNQSVNYEDPNLNIAIPVFS 126
Query: 431 IHGNHDDPVGQGSVSSLDILSITGLV 508
IHGNHDDP G G +SSLD+LS +GLV
Sbjct: 127 IHGNHDDPSGFGRLSSLDLLSTSGLV 152
Score = 58.4 bits (135), Expect = 1e-07
Identities = 27/42 (64%), Positives = 33/42 (78%)
Frame = +3
Query: 102 DTLRILIASDIHLGFMENDPVRGEDSFIAFEEVLSLAVQCDV 227
+ +RIL+A+D HLG+ E D VRGEDSF AFEE+L LAV DV
Sbjct: 13 NVIRILVATDNHLGYGEKDAVRGEDSFTAFEEILELAVSEDV 54
Score = 46.4 bits (105), Expect = 6e-04
Identities = 19/29 (65%), Positives = 24/29 (82%)
Frame = +1
Query: 511 YFGKWTXYTHVRISPVLLQKGLTRLALYG 597
YFG+WT T V ISPVL++KG ++LALYG
Sbjct: 154 YFGRWTDLTQVEISPVLMRKGESQLALYG 182
>UniRef50_UPI00015B5FB8 Cluster: PREDICTED: similar to meiotic
recombination repair protein 11 (mre11); n=1; Nasonia
vitripennis|Rep: PREDICTED: similar to meiotic
recombination repair protein 11 (mre11) - Nasonia
vitripennis
Length = 664
Score = 106 bits (255), Expect = 4e-22
Identities = 47/87 (54%), Positives = 61/87 (70%), Gaps = 4/87 (4%)
Frame = +2
Query: 260 QAKPSVNXMFKCTEIIRKYCLGDKPVSIELLSDQIKNXS----RTVNYEDPNLNISYPIL 427
+AKP N + KC E++R YCL DKPV I+ L+D S + VN+EDPNLN+ P+
Sbjct: 87 EAKPPHNVVMKCLELLRTYCLNDKPVKIQFLTDPEAVFSHCAQKVVNFEDPNLNVGIPVF 146
Query: 428 SIHGNHDDPVGQGSVSSLDILSITGLV 508
SIHGNHDDP G G+V S+D+LS TGL+
Sbjct: 147 SIHGNHDDPTGYGAVGSMDVLSATGLI 173
Score = 46.4 bits (105), Expect = 6e-04
Identities = 18/29 (62%), Positives = 24/29 (82%)
Frame = +1
Query: 511 YFGKWTXYTHVRISPVLLQKGLTRLALYG 597
YFGKWT T V I+P+L++KG+T +ALYG
Sbjct: 175 YFGKWTDVTQVSIAPLLIRKGVTTIALYG 203
Score = 38.3 bits (85), Expect = 0.17
Identities = 18/35 (51%), Positives = 25/35 (71%)
Frame = +3
Query: 108 LRILIASDIHLGFMENDPVRGEDSFIAFEEVLSLA 212
+++LIA+DIHLG+ E R +DSF FEE+L A
Sbjct: 37 MKVLIATDIHLGY-EQTTKREDDSFRTFEEILQYA 70
>UniRef50_UPI0000D566D3 Cluster: PREDICTED: similar to CG16928-PA;
n=1; Tribolium castaneum|Rep: PREDICTED: similar to
CG16928-PA - Tribolium castaneum
Length = 555
Score = 104 bits (249), Expect = 2e-21
Identities = 58/139 (41%), Positives = 74/139 (53%), Gaps = 2/139 (1%)
Frame = +2
Query: 260 QAKPSVNXMFKCTEIIRKYCLGDKPVSIELLSDQIKNX--SRTVNYEDPNLNISYPILSI 433
+A+P+ + + K E+IRKYC GDKPV IE SD + + +VNYEDPN+N+S PI SI
Sbjct: 60 EARPTPHCIKKTIELIRKYCFGDKPVEIEFFSDPSLHFPGNASVNYEDPNINVSIPIFSI 119
Query: 434 HGNHDDPVGQGSVSSLDILSITGLVIILXNGPXTRTXEYHQXFCKKVLRGSPSMGLKPFK 613
HGNHDDP G+ VS+LD+ S GLV E + KK GL
Sbjct: 120 HGNHDDPTGKNHVSALDLFSSMGLVNYFGRWDDVTKVEINPILLKKGDSKLALYGLSHI- 178
Query: 614 RSETFTSXLAEKKVGXXRP 670
R E +KKV P
Sbjct: 179 RDERLARLFLDKKVVTKTP 197
Score = 45.2 bits (102), Expect = 0.001
Identities = 19/40 (47%), Positives = 29/40 (72%)
Frame = +3
Query: 93 SPXDTLRILIASDIHLGFMENDPVRGEDSFIAFEEVLSLA 212
S +T RIL+A+D+HLG+ N+ +R D+F FEE+L +A
Sbjct: 4 SEANTFRILLATDLHLGYGLNNSIRENDTFRTFEEILQIA 43
>UniRef50_P49959 Cluster: Double-strand break repair protein MRE11A;
n=42; Deuterostomia|Rep: Double-strand break repair
protein MRE11A - Homo sapiens (Human)
Length = 708
Score = 99 bits (238), Expect = 5e-20
Identities = 46/85 (54%), Positives = 58/85 (68%), Gaps = 4/85 (4%)
Frame = +2
Query: 266 KPSVNXMFKCTEIIRKYCLGDKPVSIELLSDQIKNXSRT----VNYEDPNLNISYPILSI 433
KPS + C E++RKYC+GD+PV E+LSDQ N + VNY+D NLNIS P+ SI
Sbjct: 66 KPSRKTLHTCLELLRKYCMGDRPVQFEILSDQSVNFGFSKFPWVNYQDGNLNISIPVFSI 125
Query: 434 HGNHDDPVGQGSVSSLDILSITGLV 508
HGNHDDP G ++ +LDILS G V
Sbjct: 126 HGNHDDPTGADALCALDILSCAGFV 150
Score = 55.6 bits (128), Expect = 1e-06
Identities = 23/42 (54%), Positives = 33/42 (78%)
Frame = +3
Query: 102 DTLRILIASDIHLGFMENDPVRGEDSFIAFEEVLSLAVQCDV 227
+T +IL+A+DIHLGFME D VRG D+F+ +E+L LA + +V
Sbjct: 11 NTFKILVATDIHLGFMEKDAVRGNDTFVTLDEILRLAQENEV 52
Score = 37.5 bits (83), Expect = 0.30
Identities = 19/42 (45%), Positives = 27/42 (64%)
Frame = +1
Query: 511 YFGKWTXYTHVRISPVLLQKGLTRLALYGT*AI*KIRDFHVF 636
+FG+ + ISPVLLQKG T++ALYG +I R + +F
Sbjct: 152 HFGRSMSVEKIDISPVLLQKGSTKIALYGLGSIPDERLYRMF 193
>UniRef50_UPI0000DB6F19 Cluster: PREDICTED: similar to meiotic
recombination 11 CG16928-PA; n=1; Apis mellifera|Rep:
PREDICTED: similar to meiotic recombination 11
CG16928-PA - Apis mellifera
Length = 501
Score = 99.5 bits (237), Expect = 7e-20
Identities = 46/85 (54%), Positives = 63/85 (74%), Gaps = 4/85 (4%)
Frame = +2
Query: 266 KPSVNXMFKCTEIIRKYCLGDKPVSIELLSDQ---IKNXS-RTVNYEDPNLNISYPILSI 433
KPS + +C E++RKYCLG K + I+ LSD ++ + +TVNYEDPNLNIS PI SI
Sbjct: 74 KPSQTAILRCMELLRKYCLGTKEIKIQFLSDPEVIFRHCAYKTVNYEDPNLNISMPIFSI 133
Query: 434 HGNHDDPVGQGSVSSLDILSITGLV 508
HGNHDDP G++ S+D+LS++GL+
Sbjct: 134 HGNHDDP-SFGAIGSMDLLSVSGLI 157
Score = 48.0 bits (109), Expect = 2e-04
Identities = 26/59 (44%), Positives = 35/59 (59%), Gaps = 2/59 (3%)
Frame = +3
Query: 57 SKIMIENDISAWSPXDTLRILIASDIHLGFMENDP--VRGEDSFIAFEEVLSLAVQCDV 227
S I N +P D+++ILIA+DIHLGF N + EDSFI FEE+L + +V
Sbjct: 2 SSTPINNKNEKRNPDDSIKILIATDIHLGFEYNKKRGQQSEDSFITFEEILQYGKEYEV 60
Score = 43.2 bits (97), Expect = 0.006
Identities = 16/29 (55%), Positives = 22/29 (75%)
Frame = +1
Query: 511 YFGKWTXYTHVRISPVLLQKGLTRLALYG 597
YFGKWT T + I P++++KG T +ALYG
Sbjct: 159 YFGKWTDLTKINIPPLIIKKGETHIALYG 187
>UniRef50_A7SIW1 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 720
Score = 97.1 bits (231), Expect = 3e-19
Identities = 43/85 (50%), Positives = 58/85 (68%), Gaps = 4/85 (4%)
Frame = +2
Query: 266 KPSVNXMFKCTEIIRKYCLGDKPVSIELLSDQIKNXSRT----VNYEDPNLNISYPILSI 433
KPS + + RK+C+GD+ +E LSDQ N + VNYEDPNLN+S P+ SI
Sbjct: 104 KPSRRTLHASMALFRKFCMGDRVCEVEFLSDQSINFANNRFPWVNYEDPNLNVSIPVFSI 163
Query: 434 HGNHDDPVGQGSVSSLDILSITGLV 508
HGNHDDP G+G++ +LD+LS+ GLV
Sbjct: 164 HGNHDDPAGEGNLCALDLLSVCGLV 188
Score = 54.8 bits (126), Expect = 2e-06
Identities = 24/42 (57%), Positives = 32/42 (76%)
Frame = +3
Query: 102 DTLRILIASDIHLGFMENDPVRGEDSFIAFEEVLSLAVQCDV 227
+TL ILIA+D+HLG+ E D VRG DSF+ FEE L +A + +V
Sbjct: 49 NTLSILIATDVHLGYAEKDQVRGNDSFVTFEETLQIAKKRNV 90
Score = 38.3 bits (85), Expect = 0.17
Identities = 16/29 (55%), Positives = 21/29 (72%)
Frame = +1
Query: 511 YFGKWTXYTHVRISPVLLQKGLTRLALYG 597
YFG+ + +SP+LLQKG T+LALYG
Sbjct: 190 YFGRPASVDDITVSPLLLQKGATKLALYG 218
>UniRef50_Q9XGM2 Cluster: Double-strand break repair protein MRE11;
n=14; Magnoliophyta|Rep: Double-strand break repair
protein MRE11 - Arabidopsis thaliana (Mouse-ear cress)
Length = 720
Score = 93.9 bits (223), Expect = 3e-18
Identities = 42/84 (50%), Positives = 56/84 (66%), Gaps = 3/84 (3%)
Frame = +2
Query: 266 KPSVNXMFKCTEIIRKYCLGDKPVSIELLSDQIKNXSRT---VNYEDPNLNISYPILSIH 436
KPS + K EI+R++CL DKPV +++SDQ N VNYEDP+ N+ P+ SIH
Sbjct: 63 KPSRTTLVKAIEILRRHCLNDKPVQFQVVSDQTVNFQNAFGQVNYEDPHFNVGLPVFSIH 122
Query: 437 GNHDDPVGQGSVSSLDILSITGLV 508
GNHDDP G ++S++DILS LV
Sbjct: 123 GNHDDPAGVDNLSAIDILSACNLV 146
Score = 55.6 bits (128), Expect = 1e-06
Identities = 24/42 (57%), Positives = 32/42 (76%)
Frame = +3
Query: 102 DTLRILIASDIHLGFMENDPVRGEDSFIAFEEVLSLAVQCDV 227
DTLR+L+A+D HLG+ME D +R DSF AFEE+ S+A + V
Sbjct: 8 DTLRVLVATDCHLGYMEKDEIRRHDSFKAFEEICSIAEEKQV 49
>UniRef50_Q09683 Cluster: DNA repair protein rad32; n=1;
Schizosaccharomyces pombe|Rep: DNA repair protein rad32
- Schizosaccharomyces pombe (Fission yeast)
Length = 649
Score = 93.5 bits (222), Expect = 4e-18
Identities = 53/139 (38%), Positives = 67/139 (48%), Gaps = 4/139 (2%)
Frame = +2
Query: 266 KPSVNXMFKCTEIIRKYCLGDKPVSIELLSDQIKNXSRT----VNYEDPNLNISYPILSI 433
KPS +++ +R CLGDKP +ELLSD T +NY DPN+N++ P+ SI
Sbjct: 71 KPSRKALYQALRSLRLNCLGDKPCELELLSDTSLTTGDTAVCNINYLDPNINVAIPVFSI 130
Query: 434 HGNHDDPVGQGSVSSLDILSITGLVIILXNGPXTRTXEYHQXFCKKVLRGSPSMGLKPFK 613
HGNHDDP G G S+LDIL +TGLV P +K G+
Sbjct: 131 HGNHDDPSGDGRYSALDILQVTGLVNYFGRVPENDNIVVSPILLQKGFTKLALYGISNV- 189
Query: 614 RSETFTSXLAEKKVGXXRP 670
R E E KV RP
Sbjct: 190 RDERLYHSFRENKVKFLRP 208
Score = 56.8 bits (131), Expect = 5e-07
Identities = 24/42 (57%), Positives = 34/42 (80%)
Frame = +3
Query: 102 DTLRILIASDIHLGFMENDPVRGEDSFIAFEEVLSLAVQCDV 227
+T+RILI+SD H+G+ E DPVRG DSF++F E+L +A + DV
Sbjct: 16 NTIRILISSDPHVGYGEKDPVRGNDSFVSFNEILEIARERDV 57
>UniRef50_Q9UVN9 Cluster: Double-strand break repair protein MRE11;
n=2; Fungi/Metazoa group|Rep: Double-strand break repair
protein MRE11 - Coprinus cinereus (Inky cap fungus)
(Hormographiella aspergillata)
Length = 731
Score = 91.5 bits (217), Expect = 2e-17
Identities = 42/89 (47%), Positives = 62/89 (69%), Gaps = 8/89 (8%)
Frame = +2
Query: 266 KPSVNXMFKCTEIIRKYCLGDKPVSIELLSDQIKNXSR-----TVNYEDPNLNISYPILS 430
KPS + +++ ++R+Y LGDKP+ +ELLSD + + +NYEDPN NIS P+ S
Sbjct: 76 KPSRDCLYQTLALLREYTLGDKPIQVELLSDPDEGKAAGFSFPAINYEDPNFNISIPVFS 135
Query: 431 IHGNHDDPVG---QGSVSSLDILSITGLV 508
IHGNHDDP G G++ +LD+LS++GL+
Sbjct: 136 IHGNHDDPQGPGVNGALCALDVLSVSGLL 164
Score = 59.3 bits (137), Expect = 9e-08
Identities = 24/50 (48%), Positives = 37/50 (74%)
Frame = +3
Query: 78 DISAWSPXDTLRILIASDIHLGFMENDPVRGEDSFIAFEEVLSLAVQCDV 227
+I P DT++IL+A+D H+G++E DP+RG+DS F E+L LAV+ +V
Sbjct: 13 NIETADPEDTIKILLATDNHIGYLERDPIRGQDSINTFREILQLAVKNEV 62
>UniRef50_Q4P5A9 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 883
Score = 91.1 bits (216), Expect = 2e-17
Identities = 43/89 (48%), Positives = 62/89 (69%), Gaps = 8/89 (8%)
Frame = +2
Query: 266 KPSVNXMFKCTEIIRKYCLGDKPVSIELLSDQIKNXSR-----TVNYEDPNLNISYPILS 430
KPS + + + ++R+Y LGDKP+S+ELLSD +NYEDPNLN++ P+ S
Sbjct: 164 KPSRDTLHQTMALLRQYTLGDKPISVELLSDPNDGALPGKRFPAINYEDPNLNVAIPVFS 223
Query: 431 IHGNHDDPVG---QGSVSSLDILSITGLV 508
IHGNHDDP G G++S+LD+LS++GL+
Sbjct: 224 IHGNHDDPQGVGETGALSALDLLSVSGLI 252
Score = 61.3 bits (142), Expect = 2e-08
Identities = 27/48 (56%), Positives = 37/48 (77%)
Frame = +3
Query: 84 SAWSPXDTLRILIASDIHLGFMENDPVRGEDSFIAFEEVLSLAVQCDV 227
+A S D ++I++A+D H+G+ME DPVRG+DS FEE+L LAVQ DV
Sbjct: 103 AAQSEDDHIKIMLATDNHIGYMERDPVRGQDSIRTFEEILQLAVQHDV 150
Score = 35.9 bits (79), Expect = 0.91
Identities = 16/19 (84%), Positives = 17/19 (89%)
Frame = +1
Query: 541 VRISPVLLQKGLTRLALYG 597
+RI PVLLQKG TRLALYG
Sbjct: 285 IRIKPVLLQKGETRLALYG 303
>UniRef50_A1CU25 Cluster: Meiotic recombination protein Mre11; n=14;
Pezizomycotina|Rep: Meiotic recombination protein Mre11
- Aspergillus clavatus
Length = 816
Score = 91.1 bits (216), Expect = 2e-17
Identities = 41/84 (48%), Positives = 58/84 (69%), Gaps = 3/84 (3%)
Frame = +2
Query: 266 KPSVNXMFKCTEIIRKYCLGDKPVSIELLSDQIKNXSRT---VNYEDPNLNISYPILSIH 436
KPS M++ IR CLGDKP +E+LSD +N VNYED ++N++ PI SIH
Sbjct: 80 KPSRKSMYQVMRSIRMNCLGDKPCELEMLSDASENFQGAFNHVNYEDLDINVAIPIFSIH 139
Query: 437 GNHDDPVGQGSVSSLDILSITGLV 508
GNHDDP G+G +++LD+L ++GL+
Sbjct: 140 GNHDDPSGEGHLAALDLLQVSGLL 163
Score = 53.2 bits (122), Expect = 6e-06
Identities = 22/42 (52%), Positives = 34/42 (80%)
Frame = +3
Query: 102 DTLRILIASDIHLGFMENDPVRGEDSFIAFEEVLSLAVQCDV 227
+T+RIL+A+D H+G+ E DP+RG+DS+ +F EV+ LA + DV
Sbjct: 25 ETIRILVATDNHVGYNERDPIRGDDSWKSFHEVMCLARERDV 66
Score = 38.3 bits (85), Expect = 0.17
Identities = 19/42 (45%), Positives = 25/42 (59%)
Frame = +1
Query: 511 YFGKWTXYTHVRISPVLLQKGLTRLALYGT*AI*KIRDFHVF 636
Y+G+ ++ I PVLLQKG T+LALYG + R F F
Sbjct: 165 YYGRTPESDNIHIKPVLLQKGRTKLALYGMSNVRDERLFRTF 206
>UniRef50_A5E785 Cluster: Putative uncharacterized protein; n=1;
Lodderomyces elongisporus NRRL YB-4239|Rep: Putative
uncharacterized protein - Lodderomyces elongisporus
(Yeast) (Saccharomyces elongisporus)
Length = 669
Score = 90.2 bits (214), Expect = 4e-17
Identities = 39/84 (46%), Positives = 59/84 (70%), Gaps = 3/84 (3%)
Frame = +2
Query: 266 KPSVNXMFKCTEIIRKYCLGDKPVSIELLSDQ---IKNXSRTVNYEDPNLNISYPILSIH 436
KP+ M+ + +R C+GD+P +ELLS+ + N VNYEDPNLNIS P+ +I+
Sbjct: 67 KPTKKSMYHVMKSLRANCMGDRPCELELLSEPGETMSNGFDEVNYEDPNLNISVPVFAIN 126
Query: 437 GNHDDPVGQGSVSSLDILSITGLV 508
GNHDD G+G +S+LD+L+++GL+
Sbjct: 127 GNHDDATGEGMLSALDVLAVSGLI 150
Score = 54.4 bits (125), Expect = 2e-06
Identities = 22/42 (52%), Positives = 33/42 (78%)
Frame = +3
Query: 102 DTLRILIASDIHLGFMENDPVRGEDSFIAFEEVLSLAVQCDV 227
DTL+IL+ +D H+G++ENDP+RG+DS+ F+E+ LA DV
Sbjct: 12 DTLKILLTTDNHVGYLENDPIRGDDSWKTFDEITRLARDHDV 53
Score = 33.5 bits (73), Expect = 4.9
Identities = 16/31 (51%), Positives = 19/31 (61%), Gaps = 2/31 (6%)
Frame = +1
Query: 511 YFGKWTXYTH--VRISPVLLQKGLTRLALYG 597
YFGK H + P+LLQKG T+ ALYG
Sbjct: 152 YFGKTRDNNHDTYLVKPILLQKGSTKFALYG 182
>UniRef50_Q9C291 Cluster: Double-strand break repair protein mus-23;
n=5; Pezizomycotina|Rep: Double-strand break repair
protein mus-23 - Neurospora crassa
Length = 760
Score = 89.0 bits (211), Expect = 9e-17
Identities = 51/138 (36%), Positives = 65/138 (47%), Gaps = 3/138 (2%)
Frame = +2
Query: 266 KPSVNXMFKCTEIIRKYCLGDKPVSIELLSDQIKNXSRT---VNYEDPNLNISYPILSIH 436
KPS M++ +RK+CLG KP +E LSD + VNYEDP++N++ P+ SIH
Sbjct: 83 KPSRKSMYQVMRSLRKHCLGMKPCELEFLSDAAEVFEGAFPFVNYEDPDINVAIPVFSIH 142
Query: 437 GNHDDPVGQGSVSSLDILSITGLVIILXNGPXTRTXEYHQXFCKKVLRGSPSMGLKPFKR 616
GNHDDP G G SLD+L GLV P +K GL R
Sbjct: 143 GNHDDPSGDGHYCSLDLLQAAGLVNYFGRVPEADNIHVKPILLQKGRTKMALYGLSNV-R 201
Query: 617 SETFTSXLAEKKVGXXRP 670
E + KV RP
Sbjct: 202 DERMHRTFRDNKVRFYRP 219
Score = 48.0 bits (109), Expect = 2e-04
Identities = 19/42 (45%), Positives = 32/42 (76%)
Frame = +3
Query: 102 DTLRILIASDIHLGFMENDPVRGEDSFIAFEEVLSLAVQCDV 227
DT+RIL+++D H+G+ E PVR +DS+ F+E++ +A + DV
Sbjct: 28 DTIRILVSTDNHVGYAERHPVRKDDSWRTFDEIMQIAKKQDV 69
>UniRef50_Q6BL74 Cluster: Debaryomyces hansenii chromosome F of
strain CBS767 of Debaryomyces hansenii; n=3;
Saccharomycetales|Rep: Debaryomyces hansenii chromosome
F of strain CBS767 of Debaryomyces hansenii -
Debaryomyces hansenii (Yeast) (Torulaspora hansenii)
Length = 688
Score = 88.6 bits (210), Expect = 1e-16
Identities = 41/84 (48%), Positives = 55/84 (65%), Gaps = 3/84 (3%)
Frame = +2
Query: 266 KPSVNXMFKCTEIIRKYCLGDKPVSIELLSDQIKNXSR---TVNYEDPNLNISYPILSIH 436
KPS M+K + +R CLGD+P +ELL D + TVNYEDPN+NIS P+ +I
Sbjct: 67 KPSKKSMYKVIKSLRTNCLGDRPCELELLGDPSMALGKDVDTVNYEDPNINISVPVFAIS 126
Query: 437 GNHDDPVGQGSVSSLDILSITGLV 508
GNHDD G+G + LD+LS +GL+
Sbjct: 127 GNHDDATGEGFLLPLDLLSASGLI 150
Score = 58.0 bits (134), Expect = 2e-07
Identities = 25/45 (55%), Positives = 35/45 (77%)
Frame = +3
Query: 93 SPXDTLRILIASDIHLGFMENDPVRGEDSFIAFEEVLSLAVQCDV 227
S DT+RILI +D H+G+ ENDP+RG+DS+ FEE+ S+A + DV
Sbjct: 9 SGPDTIRILITTDNHVGYNENDPIRGDDSWKTFEEITSIAKEKDV 53
Score = 32.7 bits (71), Expect = 8.5
Identities = 13/29 (44%), Positives = 20/29 (68%)
Frame = +1
Query: 511 YFGKWTXYTHVRISPVLLQKGLTRLALYG 597
+FGK + +SP++ QKG ++LALYG
Sbjct: 152 HFGKVPNNEELTVSPLIFQKGASKLALYG 180
>UniRef50_Q586P4 Cluster: Endo/exonuclease Mre11; n=3; Trypanosoma
brucei|Rep: Endo/exonuclease Mre11 - Trypanosoma brucei
Length = 763
Score = 87.8 bits (208), Expect = 2e-16
Identities = 42/85 (49%), Positives = 56/85 (65%), Gaps = 4/85 (4%)
Frame = +2
Query: 266 KPSVNXMFKCTEIIRKYCLGDKPVSIELLSDQIKNXSR----TVNYEDPNLNISYPILSI 433
KPS+ + + + ++R Y LGDKP+S LLSD +N N++DPN+N++ PI I
Sbjct: 92 KPSLGCLARTSSLLRSYVLGDKPISFTLLSDPKRNFPTHPVPLANFQDPNINVALPIFMI 151
Query: 434 HGNHDDPVGQGSVSSLDILSITGLV 508
HGNHDDPV G SS+DILS GLV
Sbjct: 152 HGNHDDPV--GGTSSIDILSTAGLV 174
Score = 43.6 bits (98), Expect = 0.005
Identities = 19/36 (52%), Positives = 23/36 (63%)
Frame = +3
Query: 105 TLRILIASDIHLGFMENDPVRGEDSFIAFEEVLSLA 212
T + L+ SD HLG+ E D RG+DSF FEE L A
Sbjct: 37 TFKFLVTSDNHLGYQERDSRRGDDSFTTFEECLRAA 72
>UniRef50_Q5KHA6 Cluster: Meiotic DNA double-strand break
processing-related protein, putative; n=3; Fungi/Metazoa
group|Rep: Meiotic DNA double-strand break
processing-related protein, putative - Cryptococcus
neoformans (Filobasidiella neoformans)
Length = 721
Score = 86.6 bits (205), Expect = 5e-16
Identities = 40/89 (44%), Positives = 61/89 (68%), Gaps = 8/89 (8%)
Frame = +2
Query: 266 KPSVNXMFKCTEIIRKYCLGDKPVSIELLSDQIKNXSR-----TVNYEDPNLNISYPILS 430
+PS M + ++R++ LGDKP+ ELLSD + + VNYEDPN+NI+ P+ S
Sbjct: 86 RPSRTCMHQTIALLREFTLGDKPIEFELLSDPMDGSTPGFSFPAVNYEDPNINIAIPVFS 145
Query: 431 IHGNHDDPVG---QGSVSSLDILSITGLV 508
IHGNHDDP G +G++ +LD+LS++G++
Sbjct: 146 IHGNHDDPQGTGPEGALCALDVLSVSGVL 174
Score = 50.4 bits (115), Expect = 4e-05
Identities = 23/39 (58%), Positives = 28/39 (71%)
Frame = +3
Query: 111 RILIASDIHLGFMENDPVRGEDSFIAFEEVLSLAVQCDV 227
RILIA+D H+G+ E DPVRG+DS F E+L LA DV
Sbjct: 34 RILIATDNHIGYAEKDPVRGQDSINTFREILELARDHDV 72
>UniRef50_Q6ZBS2 Cluster: Putative DNA repair and meiosis protein
Mre11; n=2; Oryza sativa|Rep: Putative DNA repair and
meiosis protein Mre11 - Oryza sativa subsp. japonica
(Rice)
Length = 615
Score = 83.8 bits (198), Expect = 3e-15
Identities = 38/84 (45%), Positives = 52/84 (61%), Gaps = 3/84 (3%)
Frame = +2
Query: 266 KPSVNXMFKCTEIIRKYCLGDKPVSIELLSDQ---IKNXSRTVNYEDPNLNISYPILSIH 436
KPS++ + K EIIR YCL D V +++SDQ ++N VN+EDPN NI P+ ++H
Sbjct: 69 KPSISTLVKSMEIIRSYCLNDHQVQFQVVSDQAACLQNRFGRVNFEDPNFNIGLPVFTVH 128
Query: 437 GNHDDPVGQGSVSSLDILSITGLV 508
G HD P G +S+ DILS V
Sbjct: 129 GTHDGPAGVDGLSATDILSACNFV 152
Score = 49.6 bits (113), Expect = 7e-05
Identities = 22/36 (61%), Positives = 28/36 (77%)
Frame = +3
Query: 108 LRILIASDIHLGFMENDPVRGEDSFIAFEEVLSLAV 215
LRIL+A+D HLG++E D +R DSF FEE+ SLAV
Sbjct: 16 LRILVATDCHLGYLEKDEIRRFDSFDTFEEICSLAV 51
>UniRef50_P32829 Cluster: Double-strand break repair protein MRE11;
n=9; Saccharomycetales|Rep: Double-strand break repair
protein MRE11 - Saccharomyces cerevisiae (Baker's yeast)
Length = 692
Score = 80.2 bits (189), Expect = 4e-14
Identities = 39/85 (45%), Positives = 52/85 (61%), Gaps = 4/85 (4%)
Frame = +2
Query: 266 KPSVNXMFKCTEIIRKYCLGDKPVSIELLSD--QIKNXSR--TVNYEDPNLNISYPILSI 433
KPS +++ + +R C+GDKP +ELLSD Q+ + VNYEDPN NIS P+ I
Sbjct: 62 KPSKKSLYQVLKTLRLCCMGDKPCELELLSDPSQVFHYDEFTNVNYEDPNFNISIPVFGI 121
Query: 434 HGNHDDPVGQGSVSSLDILSITGLV 508
GNHDD G + +DIL TGL+
Sbjct: 122 SGNHDDASGDSLLCPMDILHATGLI 146
Score = 50.8 bits (116), Expect = 3e-05
Identities = 21/37 (56%), Positives = 29/37 (78%)
Frame = +3
Query: 102 DTLRILIASDIHLGFMENDPVRGEDSFIAFEEVLSLA 212
DT+RILI +D H+G+ ENDP+ G+DS+ F EV+ LA
Sbjct: 7 DTIRILITTDNHVGYNENDPITGDDSWKTFHEVMMLA 43
Score = 36.7 bits (81), Expect = 0.52
Identities = 18/42 (42%), Positives = 25/42 (59%)
Frame = +1
Query: 511 YFGKWTXYTHVRISPVLLQKGLTRLALYGT*AI*KIRDFHVF 636
+FGK +++ P+L QKG T+LALYG A+ R F F
Sbjct: 148 HFGKVIESDKIKVVPLLFQKGSTKLALYGLAAVRDERLFRTF 189
>UniRef50_UPI00015B5FB6 Cluster: PREDICTED: similar to
endo/exonuclease Mre11; n=1; Nasonia vitripennis|Rep:
PREDICTED: similar to endo/exonuclease Mre11 - Nasonia
vitripennis
Length = 450
Score = 78.2 bits (184), Expect = 2e-13
Identities = 38/87 (43%), Positives = 56/87 (64%), Gaps = 4/87 (4%)
Frame = +2
Query: 260 QAKPSVNXMFKCTEIIRKYCLGDKPVSIELLSDQ--IKN--XSRTVNYEDPNLNISYPIL 427
+A P +N + +C ++RKYCL DKP I+ L+D I N + N++DP LNI PI
Sbjct: 77 EANPPLNVITRCISLLRKYCLSDKPAKIDCLTDPEWIFNHCPDKIANFKDPKLNIGMPIF 136
Query: 428 SIHGNHDDPVGQGSVSSLDILSITGLV 508
+IHG+ D P+ G V +LD+L+ TGL+
Sbjct: 137 AIHGHRDAPL-FGPVGALDLLAATGLI 162
Score = 42.7 bits (96), Expect = 0.008
Identities = 18/29 (62%), Positives = 21/29 (72%)
Frame = +1
Query: 511 YFGKWTXYTHVRISPVLLQKGLTRLALYG 597
YFGKW + I PVLL+KG+T LALYG
Sbjct: 164 YFGKWPDKDKISIPPVLLRKGITTLALYG 192
Score = 33.9 bits (74), Expect = 3.7
Identities = 17/40 (42%), Positives = 27/40 (67%)
Frame = +3
Query: 108 LRILIASDIHLGFMENDPVRGEDSFIAFEEVLSLAVQCDV 227
+++L+A+DI+LG+ E R +DSF FEE+L A +V
Sbjct: 27 IQVLVAADINLGY-EQTVKREDDSFRTFEEILIYARDYEV 65
>UniRef50_Q23255 Cluster: Double-strand break repair protein mre-11;
n=2; Caenorhabditis|Rep: Double-strand break repair
protein mre-11 - Caenorhabditis elegans
Length = 728
Score = 77.4 bits (182), Expect = 3e-13
Identities = 37/84 (44%), Positives = 56/84 (66%), Gaps = 4/84 (4%)
Frame = +2
Query: 269 PSVNXMFKCTEIIRKYCLGDKPVSIELLSDQIKNXSRTV----NYEDPNLNISYPILSIH 436
PS + T+++R+YCL P+++E LSD N +++V NY D NLN+ PI +IH
Sbjct: 120 PSREVQHRVTQLLRQYCLNGNPIALEFLSDASVNFNQSVFGHVNYYDQNLNVGLPIFTIH 179
Query: 437 GNHDDPVGQGSVSSLDILSITGLV 508
GNHDD G+G +++LD+L +GLV
Sbjct: 180 GNHDDLSGKG-LTALDLLHESGLV 202
Score = 37.1 bits (82), Expect = 0.40
Identities = 17/39 (43%), Positives = 25/39 (64%)
Frame = +3
Query: 102 DTLRILIASDIHLGFMENDPVRGEDSFIAFEEVLSLAVQ 218
D ++IL+A+DIH G+ EN D+ FEEVL +A +
Sbjct: 64 DIIKILVATDIHCGYGENKANIHMDAVNTFEEVLQIATE 102
Score = 35.5 bits (78), Expect = 1.2
Identities = 16/28 (57%), Positives = 20/28 (71%)
Frame = +1
Query: 514 FGKWTXYTHVRISPVLLQKGLTRLALYG 597
FGK + +SP+LL+KG TRLALYG
Sbjct: 205 FGKHSNIQEFIVSPILLRKGETRLALYG 232
>UniRef50_A4HFW3 Cluster: Endo/exonuclease Mre11, putative; n=5;
Trypanosomatidae|Rep: Endo/exonuclease Mre11, putative -
Leishmania braziliensis
Length = 863
Score = 76.6 bits (180), Expect = 5e-13
Identities = 36/83 (43%), Positives = 50/83 (60%), Gaps = 4/83 (4%)
Frame = +2
Query: 266 KPSVNXMFKCTEIIRKYCLGDKPVSIELLSDQIKNXSR----TVNYEDPNLNISYPILSI 433
KPS+ + + + RKY G+K V LLSD N N++DPN+N++ P+ +I
Sbjct: 60 KPSLGCLVRACSLFRKYVFGNKTVPFSLLSDAATNFPTHALPMANFQDPNINVALPVFAI 119
Query: 434 HGNHDDPVGQGSVSSLDILSITG 502
HGNHDDPV G SSLD+L+ G
Sbjct: 120 HGNHDDPV--GGTSSLDLLATNG 140
Score = 48.0 bits (109), Expect = 2e-04
Identities = 21/36 (58%), Positives = 25/36 (69%)
Frame = +3
Query: 105 TLRILIASDIHLGFMENDPVRGEDSFIAFEEVLSLA 212
T + L+ +D HLGF E DP RG+DSF FEEVL A
Sbjct: 5 TFKFLLTTDNHLGFAERDPRRGDDSFTTFEEVLRAA 40
Score = 33.1 bits (72), Expect = 6.4
Identities = 15/29 (51%), Positives = 19/29 (65%)
Frame = +1
Query: 511 YFGKWTXYTHVRISPVLLQKGLTRLALYG 597
YFG T + + PVLL+KG T +ALYG
Sbjct: 144 YFGHVTSLDDIILEPVLLRKGSTFIALYG 172
>UniRef50_Q6CEM3 Cluster: Yarrowia lipolytica chromosome B of strain
CLIB122 of Yarrowia lipolytica; n=1; Yarrowia
lipolytica|Rep: Yarrowia lipolytica chromosome B of
strain CLIB122 of Yarrowia lipolytica - Yarrowia
lipolytica (Candida lipolytica)
Length = 701
Score = 76.6 bits (180), Expect = 5e-13
Identities = 35/84 (41%), Positives = 51/84 (60%), Gaps = 3/84 (3%)
Frame = +2
Query: 266 KPSVNXMFKCTEIIRKYCLGDKPVSIELLSDQIKNXSRT---VNYEDPNLNISYPILSIH 436
KPS M++ +R C G++P +ELLSD +T +NYEDPN+N+S P+ +I
Sbjct: 62 KPSRKSMYQVIRSLRMNCYGERPCELELLSDPTLALDQTFNHLNYEDPNINVSVPVFAIS 121
Query: 437 GNHDDPVGQGSVSSLDILSITGLV 508
GNHDD G + D+L+ TGL+
Sbjct: 122 GNHDDSGGDAMLCPNDVLAATGLI 145
Score = 51.6 bits (118), Expect = 2e-05
Identities = 22/42 (52%), Positives = 31/42 (73%)
Frame = +3
Query: 102 DTLRILIASDIHLGFMENDPVRGEDSFIAFEEVLSLAVQCDV 227
DT+RILI +D H+G+ E DP+RG+DS+ F E++ LA DV
Sbjct: 7 DTIRILITTDNHVGYNEQDPIRGDDSWKTFHEIMGLARTEDV 48
Score = 34.3 bits (75), Expect = 2.8
Identities = 20/52 (38%), Positives = 30/52 (57%)
Frame = +1
Query: 511 YFGKWTXYTHVRISPVLLQKGLTRLALYGT*AI*KIRDFHVFXG*KKSGNXE 666
+FG+ T + ++P+L +KG T LALYG + +RD +F SGN E
Sbjct: 147 HFGRVTQNDQITVTPLLFRKGSTNLALYG---LANVRDERLFRT-FASGNVE 194
>UniRef50_Q016A4 Cluster: Mre11 protein; n=3; Ostreococcus|Rep:
Mre11 protein - Ostreococcus tauri
Length = 1229
Score = 75.8 bits (178), Expect = 9e-13
Identities = 38/98 (38%), Positives = 57/98 (58%), Gaps = 14/98 (14%)
Frame = +2
Query: 257 DQAKPSVNXMFKCTEIIRKYCLGDKPVSIELLSDQIKNXSRTV--------------NYE 394
D KPS + +C +++R+ GD V IE+LSD +N V NYE
Sbjct: 528 DVNKPSRETLVRCMDVLREATRGDGAVRIEVLSDTKENFPHRVHSPDGDVRPHAGIVNYE 587
Query: 395 DPNLNISYPILSIHGNHDDPVGQGSVSSLDILSITGLV 508
DP+ N+ P+ SIHGNHDDP G+ ++S++D+L+ G+V
Sbjct: 588 DPHTNVELPVFSIHGNHDDPAGERNLSAMDVLASAGVV 625
Score = 49.6 bits (113), Expect = 7e-05
Identities = 23/43 (53%), Positives = 31/43 (72%), Gaps = 2/43 (4%)
Frame = +3
Query: 102 DTLRILIASDIHLGFMENDPVRGEDSFIAFEEVLSLA--VQCD 224
+TLR+L+A+D HLGF E D VR +D+F AFEE+ A +CD
Sbjct: 476 NTLRVLVATDTHLGFAERDAVRKDDAFAAFEEIFRHAREQKCD 518
>UniRef50_A5YZR9 Cluster: MRE11B; n=2; Magnoliophyta|Rep: MRE11B -
Zea mays (Maize)
Length = 672
Score = 75.8 bits (178), Expect = 9e-13
Identities = 35/79 (44%), Positives = 51/79 (64%), Gaps = 3/79 (3%)
Frame = +2
Query: 266 KPSVNXMFKCTEIIRKYCLGDKPVSIELLSDQ---IKNXSRTVNYEDPNLNISYPILSIH 436
KPS + + K EI+R+YC+ D PV +++SDQ ++N VNYEDPN I P+ +IH
Sbjct: 138 KPSNSTLVKAIEILRRYCMNDCPVQFQVISDQAASLQNRFCQVNYEDPNYKIGLPVFTIH 197
Query: 437 GNHDDPVGQGSVSSLDILS 493
G+ D P G ++S DIL+
Sbjct: 198 GDQDYPTGTDNLSVNDILT 216
Score = 54.0 bits (124), Expect = 3e-06
Identities = 23/39 (58%), Positives = 32/39 (82%)
Frame = +3
Query: 102 DTLRILIASDIHLGFMENDPVRGEDSFIAFEEVLSLAVQ 218
++LR+L+A+D HLG++E D VRG DSF FEE+ SLAV+
Sbjct: 83 NSLRVLVATDCHLGYLEKDEVRGFDSFDTFEEICSLAVK 121
>UniRef50_A5DLP0 Cluster: Putative uncharacterized protein; n=1;
Pichia guilliermondii|Rep: Putative uncharacterized
protein - Pichia guilliermondii (Yeast) (Candida
guilliermondii)
Length = 641
Score = 74.5 bits (175), Expect = 2e-12
Identities = 36/84 (42%), Positives = 50/84 (59%), Gaps = 3/84 (3%)
Frame = +2
Query: 266 KPSVNXMFKCTEIIRKYCLGDKPVSIELLSDQIKNXSRT---VNYEDPNLNISYPILSIH 436
KPS +++ + +R CLGD+P +EL+SD + VNYED N NI P+ +I
Sbjct: 67 KPSKKSLYQVIKSLRSNCLGDRPCELELISDPSMALTLDFPGVNYEDENFNIGVPVFAIS 126
Query: 437 GNHDDPVGQGSVSSLDILSITGLV 508
GNHDD G + LDIL+ +GLV
Sbjct: 127 GNHDDATGDSLLLPLDILAASGLV 150
Score = 49.6 bits (113), Expect = 7e-05
Identities = 21/42 (50%), Positives = 31/42 (73%)
Frame = +3
Query: 102 DTLRILIASDIHLGFMENDPVRGEDSFIAFEEVLSLAVQCDV 227
+T+ ILI +D H+G+ ENDP+RG+DS FEE+ +A + DV
Sbjct: 12 NTISILITTDNHVGYHENDPIRGDDSGKTFEEITRIAKERDV 53
Score = 35.1 bits (77), Expect = 1.6
Identities = 14/29 (48%), Positives = 20/29 (68%)
Frame = +1
Query: 511 YFGKWTXYTHVRISPVLLQKGLTRLALYG 597
YFGK + ++P+L +KG T+LALYG
Sbjct: 152 YFGKVVNNEDITVAPLLFKKGTTKLALYG 180
>UniRef50_A3FQD2 Cluster: DNA repair and meiosis protein Mre11; n=2;
Cryptosporidium|Rep: DNA repair and meiosis protein
Mre11 - Cryptosporidium parvum Iowa II
Length = 513
Score = 67.3 bits (157), Expect = 3e-10
Identities = 30/69 (43%), Positives = 42/69 (60%)
Frame = +2
Query: 284 MFKCTEIIRKYCLGDKPVSIELLSDQIKNXSRTVNYEDPNLNISYPILSIHGNHDDPVGQ 463
M+K IIR+YC+G+K + L+ Q + N+E + N+S P IHGNHDDP +
Sbjct: 1 MYKVMNIIREYCMGNKQIKFRALNRQDSSNVNGYNWEVGDANVSIPFFGIHGNHDDPGEE 60
Query: 464 GSVSSLDIL 490
G +S LDIL
Sbjct: 61 GLLSPLDIL 69
Score = 35.9 bits (79), Expect = 0.91
Identities = 15/29 (51%), Positives = 20/29 (68%)
Frame = +1
Query: 511 YFGKWTXYTHVRISPVLLQKGLTRLALYG 597
Y GK ++ + PVLL+KG TRLA+YG
Sbjct: 77 YIGKNNNVDNIEVFPVLLEKGSTRLAIYG 105
>UniRef50_Q0MR25 Cluster: MRE11-like protein; n=1; Penicillium
marneffei|Rep: MRE11-like protein - Penicillium
marneffei
Length = 731
Score = 64.1 bits (149), Expect = 3e-09
Identities = 24/42 (57%), Positives = 36/42 (85%)
Frame = +2
Query: 383 VNYEDPNLNISYPILSIHGNHDDPVGQGSVSSLDILSITGLV 508
VNYED ++N++ P+ SIHGNHDDP G+G +++LDIL ++GL+
Sbjct: 93 VNYEDLDINVAIPVFSIHGNHDDPSGEGHLAALDILQVSGLL 134
Score = 53.2 bits (122), Expect = 6e-06
Identities = 21/42 (50%), Positives = 33/42 (78%)
Frame = +3
Query: 102 DTLRILIASDIHLGFMENDPVRGEDSFIAFEEVLSLAVQCDV 227
DT+RIL+++D H+G+ E DP+RG+DS+ F E++ LA + DV
Sbjct: 14 DTIRILVSTDNHVGYNERDPIRGDDSWKTFHEIMCLAKERDV 55
Score = 38.3 bits (85), Expect = 0.17
Identities = 18/42 (42%), Positives = 28/42 (66%)
Frame = +1
Query: 511 YFGKWTXYTHVRISPVLLQKGLTRLALYGT*AI*KIRDFHVF 636
Y+G+ ++++ PVLLQKG T+LALYG + +RD +F
Sbjct: 136 YYGRTPESDNIQVKPVLLQKGRTKLALYG---LSNVRDERLF 174
>UniRef50_Q8SRV0 Cluster: DOUBLE-STRAND BREAK DNA REPAIR PROTEIN;
n=1; Encephalitozoon cuniculi|Rep: DOUBLE-STRAND BREAK
DNA REPAIR PROTEIN - Encephalitozoon cuniculi
Length = 567
Score = 62.1 bits (144), Expect = 1e-08
Identities = 30/81 (37%), Positives = 47/81 (58%)
Frame = +2
Query: 266 KPSVNXMFKCTEIIRKYCLGDKPVSIELLSDQIKNXSRTVNYEDPNLNISYPILSIHGNH 445
+PS + + + + R+YC+G++ + + +N+ D N+ IS P++SIHGNH
Sbjct: 54 RPSRSCLNRTIGLFRRYCIGNERSGLR--------SNLALNFHDQNIGISIPVVSIHGNH 105
Query: 446 DDPVGQGSVSSLDILSITGLV 508
DDP G VS +DIL GLV
Sbjct: 106 DDPSGISMVSPIDILQSAGLV 126
Score = 44.8 bits (101), Expect = 0.002
Identities = 19/35 (54%), Positives = 27/35 (77%)
Frame = +3
Query: 108 LRILIASDIHLGFMENDPVRGEDSFIAFEEVLSLA 212
++ILI SD HLG+ E+DPV +DS+ FEE+L +A
Sbjct: 1 MKILITSDNHLGYRESDPVLLDDSYDTFEEILGIA 35
>UniRef50_UPI000049A054 Cluster: DNA repair protein rad32; n=1;
Entamoeba histolytica HM-1:IMSS|Rep: DNA repair protein
rad32 - Entamoeba histolytica HM-1:IMSS
Length = 550
Score = 58.8 bits (136), Expect = 1e-07
Identities = 25/81 (30%), Positives = 47/81 (58%)
Frame = +2
Query: 266 KPSVNXMFKCTEIIRKYCLGDKPVSIELLSDQIKNXSRTVNYEDPNLNISYPILSIHGNH 445
+P+ + + K +I+KYC+GD + + + S +N DP +N+ +P+ +IHG +
Sbjct: 56 RPNKSCVSKTANLIKKYCIGDADIPYTIKDEA--ELSYPLNITDPYINVKHPLFTIHGTN 113
Query: 446 DDPVGQGSVSSLDILSITGLV 508
D+P G ++ +IL+ GLV
Sbjct: 114 DEPSGYKLIAGSEILASCGLV 134
>UniRef50_Q22G12 Cluster: Ser/Thr protein phosphatase family
protein; n=1; Tetrahymena thermophila SB210|Rep: Ser/Thr
protein phosphatase family protein - Tetrahymena
thermophila SB210
Length = 884
Score = 56.0 bits (129), Expect = 8e-07
Identities = 23/37 (62%), Positives = 31/37 (83%)
Frame = +3
Query: 102 DTLRILIASDIHLGFMENDPVRGEDSFIAFEEVLSLA 212
+T +IL+A+D H+G+ ENDP+RG DSF AFEEVL +A
Sbjct: 22 NTFKILVATDNHVGYKENDPIRGNDSFEAFEEVLKIA 58
Score = 52.8 bits (121), Expect = 7e-06
Identities = 32/81 (39%), Positives = 46/81 (56%), Gaps = 1/81 (1%)
Frame = +2
Query: 260 QAKPSVNXMFKCTEIIRKYCLGDKPVSIELLSDQIKNXSRTVNYEDPNLNISYPILSIHG 439
+ PS ++K ++ Y LGD E+L I N + VN++D NLNI PI IHG
Sbjct: 75 ETNPSQQCLYKMLNLLGNYVLGDG----EILYG-ISNYN-DVNFQDCNLNIELPIFVIHG 128
Query: 440 NHDDPVGQ-GSVSSLDILSIT 499
NHD P + G++S +D+L T
Sbjct: 129 NHDYPSDEYGNLSVIDLLHAT 149
Score = 35.5 bits (78), Expect = 1.2
Identities = 12/29 (41%), Positives = 22/29 (75%)
Frame = +1
Query: 511 YFGKWTXYTHVRISPVLLQKGLTRLALYG 597
+FGK++ ++++P++ QKG T +ALYG
Sbjct: 154 HFGKFSNIEQIKVTPIIFQKGNTTVALYG 182
>UniRef50_Q86C23 Cluster: Mre11; n=2; Entamoeba histolytica|Rep:
Mre11 - Entamoeba histolytica
Length = 603
Score = 53.2 bits (122), Expect = 6e-06
Identities = 32/84 (38%), Positives = 40/84 (47%)
Frame = +2
Query: 257 DQAKPSVNXMFKCTEIIRKYCLGDKPVSIELLSDQIKNXSRTVNYEDPNLNISYPILSIH 436
D PS + K E++RKY +G S ++ N N N I YP+ IH
Sbjct: 58 DDQNPSKYCLTKTMELMRKYLMGKPKNSFDVAYTYEHNQED--NGFSMNQGIKYPMYVIH 115
Query: 437 GNHDDPVGQGSVSSLDILSITGLV 508
GNHD P G V+ LDIL GLV
Sbjct: 116 GNHDIPSGIEHVAGLDILQTAGLV 139
Score = 39.9 bits (89), Expect = 0.056
Identities = 20/42 (47%), Positives = 26/42 (61%)
Frame = +3
Query: 102 DTLRILIASDIHLGFMENDPVRGEDSFIAFEEVLSLAVQCDV 227
+T +ILI SD HLG E +D ++AFEE+L A Q DV
Sbjct: 6 NTFKILICSDTHLGAGEKSHCLKDDCYLAFEEILQQANQEDV 47
Score = 35.5 bits (78), Expect = 1.2
Identities = 15/24 (62%), Positives = 19/24 (79%)
Frame = +1
Query: 526 TXYTHVRISPVLLQKGLTRLALYG 597
T T + +SP+LLQKG TR+ALYG
Sbjct: 155 TDQTILHLSPILLQKGTTRIALYG 178
>UniRef50_A2ECB0 Cluster: Ser/Thr protein phosphatase, putative;
n=1; Trichomonas vaginalis G3|Rep: Ser/Thr protein
phosphatase, putative - Trichomonas vaginalis G3
Length = 562
Score = 50.0 bits (114), Expect = 5e-05
Identities = 26/81 (32%), Positives = 44/81 (54%)
Frame = +2
Query: 257 DQAKPSVNXMFKCTEIIRKYCLGDKPVSIELLSDQIKNXSRTVNYEDPNLNISYPILSIH 436
++ PS + K +I+ ++ +G L S+ + S N+ +PN+NI P +H
Sbjct: 59 NERNPSRYAVIKTMKILDEFVIGQGNPPEILYSEGL---SSDPNWLNPNINIKIPFFCMH 115
Query: 437 GNHDDPVGQGSVSSLDILSIT 499
GNHD P G GS S + +LS++
Sbjct: 116 GNHDAPNGLGSTSPIQLLSVS 136
Score = 37.5 bits (83), Expect = 0.30
Identities = 17/40 (42%), Positives = 25/40 (62%)
Frame = +3
Query: 93 SPXDTLRILIASDIHLGFMENDPVRGEDSFIAFEEVLSLA 212
S DT +I I +D H+G+ E D + +DSF AF+E + A
Sbjct: 4 SQQDTFKIAIFTDTHIGYDEQDAITEKDSFRAFKECVQNA 43
>UniRef50_Q7RBG7 Cluster: Rad32-related; n=6; Plasmodium
(Vinckeia)|Rep: Rad32-related - Plasmodium yoelii yoelii
Length = 1037
Score = 49.6 bits (113), Expect = 7e-05
Identities = 20/42 (47%), Positives = 33/42 (78%)
Frame = +3
Query: 102 DTLRILIASDIHLGFMENDPVRGEDSFIAFEEVLSLAVQCDV 227
DTL+IL+ +D HLG+ EN+P++ +D+F FEE+L +A + +V
Sbjct: 303 DTLKILLCTDNHLGYKENNPIQKKDTFNTFEEILFIAKKLNV 344
Score = 35.9 bits (79), Expect = 0.91
Identities = 15/32 (46%), Positives = 20/32 (62%)
Frame = +2
Query: 413 SYPILSIHGNHDDPVGQGSVSSLDILSITGLV 508
S P +IHGNHD P + LDIL+I+ L+
Sbjct: 536 SIPFYTIHGNHDYPYSYDYICPLDILNISNLI 567
>UniRef50_A0DUM4 Cluster: Chromosome undetermined scaffold_64, whole
genome shotgun sequence; n=5; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_64,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 1041
Score = 49.2 bits (112), Expect = 9e-05
Identities = 26/76 (34%), Positives = 44/76 (57%), Gaps = 2/76 (2%)
Frame = +2
Query: 269 PSVNXMFKCTEIIRKYCLGDKPVSIELLSDQIKNXSRTVNYEDPNLNISYPILSIHGNHD 448
P+ + + KC +I++++ GD I++ ++ + + N+ N N+ PI I+GNHD
Sbjct: 438 PTEHCLLKCVDILQRHVFGDNFGGIQM---EVNSLNYQPNFSCSNFNVQLPIFIINGNHD 494
Query: 449 DPVGQ--GSVSSLDIL 490
D V + SVS LDIL
Sbjct: 495 DIVTERNESVSILDIL 510
Score = 35.5 bits (78), Expect = 1.2
Identities = 21/42 (50%), Positives = 27/42 (64%), Gaps = 3/42 (7%)
Frame = +3
Query: 111 RILIASDIHLGFMEN---DPVRGEDSFIAFEEVLSLAVQCDV 227
+ L+ASD HLG EN R +D+F AFEEVL +A Q +V
Sbjct: 382 KFLVASDNHLGANENVGPKSNRYQDAFDAFEEVLQIASQQNV 423
>UniRef50_A5K9T7 Cluster: DNA repair exonuclease, putative; n=1;
Plasmodium vivax|Rep: DNA repair exonuclease, putative -
Plasmodium vivax
Length = 1119
Score = 48.4 bits (110), Expect = 2e-04
Identities = 24/53 (45%), Positives = 36/53 (67%)
Frame = +3
Query: 69 IENDISAWSPXDTLRILIASDIHLGFMENDPVRGEDSFIAFEEVLSLAVQCDV 227
I +S P DTL+IL+ +D HLG+ EN+ V+ ED+F +FEE+L +A +V
Sbjct: 295 IRKSLSKNEP-DTLKILLCTDNHLGYKENNAVQKEDTFNSFEEILFVAKHLNV 346
Score = 33.5 bits (73), Expect = 4.9
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = +2
Query: 419 PILSIHGNHDDPVGQGSVSSLDILSITGLV 508
P+ ++HGNHD P +S LDIL + L+
Sbjct: 549 PLFTMHGNHDYPYSCDYISPLDILHVGNLI 578
>UniRef50_Q4U965 Cluster: Double-strand break repair protein,
putative; n=2; Theileria|Rep: Double-strand break repair
protein, putative - Theileria annulata
Length = 870
Score = 46.8 bits (106), Expect = 5e-04
Identities = 23/60 (38%), Positives = 34/60 (56%)
Frame = +3
Query: 48 SCTSKIMIENDISAWSPXDTLRILIASDIHLGFMENDPVRGEDSFIAFEEVLSLAVQCDV 227
S SK D+ + ++IL+ +D HLG+ E+DP RG DS FEE+L +A +V
Sbjct: 244 SDVSKEFEFKDLDESEDDNVVKILVFTDTHLGYKEDDPFRGNDSLNTFEELLFIAKHLEV 303
Score = 41.1 bits (92), Expect = 0.024
Identities = 17/30 (56%), Positives = 21/30 (70%)
Frame = +2
Query: 419 PILSIHGNHDDPVGQGSVSSLDILSITGLV 508
P IHGNHD+P Q S+S +DIL + GLV
Sbjct: 394 PFFVIHGNHDNPTYQHSLSPIDILDVAGLV 423
>UniRef50_Q8I263 Cluster: DNA repair exonuclease, putative; n=1;
Plasmodium falciparum 3D7|Rep: DNA repair exonuclease,
putative - Plasmodium falciparum (isolate 3D7)
Length = 1118
Score = 46.0 bits (104), Expect = 9e-04
Identities = 22/53 (41%), Positives = 38/53 (71%)
Frame = +3
Query: 69 IENDISAWSPXDTLRILIASDIHLGFMENDPVRGEDSFIAFEEVLSLAVQCDV 227
I+N +S + TL+IL+ +D HLG+ EN+ ++ +DSF +FEE+L +A + +V
Sbjct: 339 IKNVLSK-NDASTLKILLCTDNHLGYKENNSIQKKDSFNSFEEILFIAKKLNV 390
Score = 36.3 bits (80), Expect = 0.69
Identities = 15/30 (50%), Positives = 20/30 (66%)
Frame = +2
Query: 419 PILSIHGNHDDPVGQGSVSSLDILSITGLV 508
P +IHGNHD P +S LDIL+I+ L+
Sbjct: 583 PFYTIHGNHDYPYSYEYISPLDILNISNLI 612
>UniRef50_A7AP02 Cluster: DNA repair protein (Mre11) family protein;
n=1; Babesia bovis|Rep: DNA repair protein (Mre11)
family protein - Babesia bovis
Length = 1040
Score = 45.6 bits (103), Expect = 0.001
Identities = 21/35 (60%), Positives = 25/35 (71%)
Frame = +3
Query: 108 LRILIASDIHLGFMENDPVRGEDSFIAFEEVLSLA 212
LR +I +D HLG E DP+R DSF AF+EVL LA
Sbjct: 207 LRFMIFTDTHLGHKETDPIRENDSFNAFQEVLFLA 241
Score = 44.8 bits (101), Expect = 0.002
Identities = 28/110 (25%), Positives = 52/110 (47%), Gaps = 11/110 (10%)
Frame = +2
Query: 257 DQAKPSVNXMFKCTEIIRKYC-----LGDKPVSIEL-LSDQIKNXSR---TVNYEDPNLN 409
D + PS + +++ E++R+YC P++I L S +++ ++ + + D +
Sbjct: 257 DDSHPSRSVIYRTMELLRRYCRKSDLTSPLPLNIRLPKSCAVRSETKRLEALKFIDGTIT 316
Query: 410 --ISYPILSIHGNHDDPVGQGSVSSLDILSITGLVIILXNGPXTRTXEYH 553
P IHGNHD+P +S +D+L ++GLV E H
Sbjct: 317 KEARVPFFVIHGNHDNPTTMNGLSPIDLLDVSGLVTFFGTVTDMTKVEVH 366
>UniRef50_Q22P75 Cluster: Putative uncharacterized protein; n=1;
Tetrahymena thermophila SB210|Rep: Putative
uncharacterized protein - Tetrahymena thermophila SB210
Length = 430
Score = 34.3 bits (75), Expect = 2.8
Identities = 21/88 (23%), Positives = 40/88 (45%), Gaps = 1/88 (1%)
Frame = +2
Query: 290 KCTEIIR-KYCLGDKPVSIELLSDQIKNXSRTVNYEDPNLNISYPILSIHGNHDDPVGQG 466
KC ++ + L + + +E L + K+ + N E NL+ISY S+H H +G
Sbjct: 76 KCQNLVDLELILRNTEIKLENLKNIYKDLEKLTNIEKLNLDISYNTFSLHAEHKYMMGID 135
Query: 467 SVSSLDILSITGLVIILXNGPXTRTXEY 550
++L S++ + + T+ Y
Sbjct: 136 KCTNLVSFSLSLSSVFILKYINTQNQNY 163
>UniRef50_UPI000038DC4A Cluster: COG1205: Distinct helicase family
with a unique C-terminal domain including a
metal-binding cysteine cluster; n=1; Nostoc punctiforme
PCC 73102|Rep: COG1205: Distinct helicase family with a
unique C-terminal domain including a metal-binding
cysteine cluster - Nostoc punctiforme PCC 73102
Length = 1782
Score = 33.5 bits (73), Expect = 4.9
Identities = 17/40 (42%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Frame = +1
Query: 472 EFS*YSLNHWVSXYFGKWTXYTH-VRISPVLLQKGLTRLA 588
EF +SL+HW+ FG H VR P+ L+ G T+LA
Sbjct: 433 EFRNHSLSHWIEMNFGLEEREGHLVRRQPISLETGATKLA 472
>UniRef50_Q2S4Q6 Cluster: Nuclease SbcCD, D subunit subfamily,
putative; n=1; Salinibacter ruber DSM 13855|Rep:
Nuclease SbcCD, D subunit subfamily, putative -
Salinibacter ruber (strain DSM 13855)
Length = 453
Score = 33.1 bits (72), Expect = 6.4
Identities = 18/38 (47%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
Frame = +2
Query: 398 PNLNISYPILSIHGNHDDPVGQGSVSSLDILS-ITGLV 508
P + P++ I GNHD PV G SSLDI I G V
Sbjct: 99 PLADADIPVVLIVGNHDHPVTFGRASSLDIFDHIAGAV 136
>UniRef50_Q46FJ9 Cluster: DNA repair protein; n=1; Methanosarcina
barkeri str. Fusaro|Rep: DNA repair protein -
Methanosarcina barkeri (strain Fusaro / DSM 804)
Length = 776
Score = 33.1 bits (72), Expect = 6.4
Identities = 18/41 (43%), Positives = 26/41 (63%), Gaps = 1/41 (2%)
Frame = +3
Query: 108 LRILIASDIHLGFME-NDPVRGEDSFIAFEEVLSLAVQCDV 227
+RIL +D HLG+ + + VR D F AFE V++ AV+ V
Sbjct: 5 IRILHTADTHLGYRQYHSEVRRNDFFAAFELVVNDAVEMQV 45
>UniRef50_Q0E553 Cluster: 64.6 kDa; n=2; Spodoptera frugiperda
ascovirus 1a|Rep: 64.6 kDa - Spodoptera frugiperda
ascovirus 1a
Length = 565
Score = 32.7 bits (71), Expect = 8.5
Identities = 18/47 (38%), Positives = 29/47 (61%), Gaps = 2/47 (4%)
Frame = -1
Query: 274 RRFSLINRSPPKSIKST--SHCTARDKTSSKAIKLSSPRTGSFSMKP 140
R S+ RSP +S + T S +R +TSS + ++S+ R+ S+SM P
Sbjct: 422 RSTSVARRSPSQSRRMTTPSRSPSRQRTSSSSRRMSARRSPSYSMSP 468
>UniRef50_Q21FY1 Cluster: Aminoglycoside phosphotransferase; n=1;
Saccharophagus degradans 2-40|Rep: Aminoglycoside
phosphotransferase - Saccharophagus degradans (strain
2-40 / ATCC 43961 / DSM 17024)
Length = 355
Score = 32.7 bits (71), Expect = 8.5
Identities = 17/47 (36%), Positives = 24/47 (51%)
Frame = -1
Query: 355 RQQLYTNRFIPKTIFADYFCTFKHXIDRRFSLINRSPPKSIKSTSHC 215
R+ L N FIPKT+ A Y + ID+ S+I +SI+ C
Sbjct: 182 REYLLANDFIPKTLLAAYQTVSEQLIDKMQSVITNINYRSIRLHGDC 228
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 577,285,158
Number of Sequences: 1657284
Number of extensions: 10205499
Number of successful extensions: 23273
Number of sequences better than 10.0: 46
Number of HSP's better than 10.0 without gapping: 22607
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23226
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 52892566912
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -