Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060982.seq
         (682 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z22930-7|CAA80512.1|  274|Anopheles gambiae trypsin protein.           26   1.3  
Z18889-1|CAA79327.1|  274|Anopheles gambiae trypsin protein.           25   2.9  
AY705395-1|AAU12504.1|  569|Anopheles gambiae nicotinic acetylch...    25   2.9  
AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.         24   3.9  
AY745219-1|AAU93486.1|  104|Anopheles gambiae cytochrome P450 pr...    23   6.7  
EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calc...    23   8.9  

>Z22930-7|CAA80512.1|  274|Anopheles gambiae trypsin protein.
          Length = 274

 Score = 25.8 bits (54), Expect = 1.3
 Identities = 11/29 (37%), Positives = 17/29 (58%)
 Frame = -1

Query: 241 KSIKSTSHCTARDKTSSKAIKLSSPRTGS 155
           K + + +HCTA   TSS  ++L + R  S
Sbjct: 81  KWVLTAAHCTAGASTSSLTVRLGTSRHAS 109


>Z18889-1|CAA79327.1|  274|Anopheles gambiae trypsin protein.
          Length = 274

 Score = 24.6 bits (51), Expect = 2.9
 Identities = 11/29 (37%), Positives = 16/29 (55%)
 Frame = -1

Query: 241 KSIKSTSHCTARDKTSSKAIKLSSPRTGS 155
           K + + +HCTA   TSS  + L + R  S
Sbjct: 81  KWVLTAAHCTAGRSTSSLTVPLGTSRHAS 109


>AY705395-1|AAU12504.1|  569|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 2 protein.
          Length = 569

 Score = 24.6 bits (51), Expect = 2.9
 Identities = 14/45 (31%), Positives = 22/45 (48%), Gaps = 1/45 (2%)
 Frame = +3

Query: 546 NITSXFAKRSYEARPLWDLSHLKDQRLSRLXWLKKKWEXXD-RWE 677
           N  +   K       L DL+ LKDQ L+   WL+ +W+    +W+
Sbjct: 57  NTDTVLVKLGLRLSQLIDLN-LKDQILTTNIWLEHEWQDHKFKWD 100


>AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.
          Length = 2259

 Score = 24.2 bits (50), Expect = 3.9
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = -2

Query: 366 FIWSDSNSILTGLSPRQY 313
           F W+D N   T L+PR Y
Sbjct: 4   FHWTDGNIHTTALTPRDY 21


>AY745219-1|AAU93486.1|  104|Anopheles gambiae cytochrome P450
           protein.
          Length = 104

 Score = 23.4 bits (48), Expect = 6.7
 Identities = 10/24 (41%), Positives = 12/24 (50%)
 Frame = -2

Query: 525 PFXKIXTNPVIERISRELTLPWPT 454
           PF  I T P +E I  E    WP+
Sbjct: 3   PFESIRTLPYLEAIVLETLRKWPS 26


>EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calcium
            channel alpha1 subunit protein.
          Length = 1893

 Score = 23.0 bits (47), Expect = 8.9
 Identities = 12/43 (27%), Positives = 23/43 (53%)
 Frame = +2

Query: 359  QIKNXSRTVNYEDPNLNISYPILSIHGNHDDPVGQGSVSSLDI 487
            ++K     VN  +   +++  IL  H  HD+P+G+   + L+I
Sbjct: 1696 EMKPKQNCVNSSNTYNHVAESIL--HAVHDEPIGRNYGNGLNI 1736


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 603,077
Number of Sequences: 2352
Number of extensions: 10630
Number of successful extensions: 19
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 68577420
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)