Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060981.seq
(689 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q6AW70 Cluster: Coat protein; n=1; Bombyx mori Macula-l... 226 5e-58
UniRef50_Q8UZB5 Cluster: Coat protein; n=1; Grapevine fleck viru... 84 4e-15
UniRef50_Q71EB5 Cluster: 25kDa coat protein; n=1; Grapevine Red ... 79 8e-14
UniRef50_Q9IW08 Cluster: Replicase-associated protein; n=10; Tym... 62 2e-08
UniRef50_Q3HWZ1 Cluster: Polyprotein; n=7; Citrus sudden death-a... 61 2e-08
UniRef50_P20124 Cluster: Coat protein; n=10; Tymovirus|Rep: Coat... 61 2e-08
UniRef50_P19128 Cluster: Coat protein; n=9; Tymovirus|Rep: Coat ... 58 2e-07
UniRef50_P03608 Cluster: Coat protein; n=21; Turnip yellow mosai... 57 4e-07
UniRef50_Q8QY74 Cluster: Coat protein; n=1; Passion fruit yellow... 54 4e-06
UniRef50_P35927 Cluster: Coat protein; n=2; Erysimum latent viru... 51 2e-05
UniRef50_O89519 Cluster: Virion protein; n=2; Tymovirus|Rep: Vir... 51 3e-05
UniRef50_O89518 Cluster: Virion protein; n=1; Wild cucumber mosa... 50 5e-05
UniRef50_P89920 Cluster: Replicase-associated polyprotein; n=5; ... 46 9e-04
UniRef50_P15158 Cluster: Coat protein; n=9; Tymovirus|Rep: Coat ... 44 0.005
UniRef50_Q0IKR9 Cluster: Polyprotein; n=8; Tymoviridae|Rep: Poly... 37 0.53
UniRef50_A7CUH6 Cluster: Putative uncharacterized protein; n=1; ... 35 1.6
UniRef50_UPI000050FF1B Cluster: COG1122: ABC-type cobalt transpo... 35 2.2
UniRef50_A2QU02 Cluster: Similarity: similarities correspond to ... 35 2.2
UniRef50_Q5KBM3 Cluster: Putative uncharacterized protein; n=2; ... 34 2.9
UniRef50_Q086E4 Cluster: Ig domain protein, group 2 domain prote... 34 3.8
UniRef50_P40198 Cluster: Carcinoembryonic antigen-related cell a... 34 3.8
UniRef50_Q9HNT5 Cluster: Putative uncharacterized protein; n=1; ... 33 5.0
UniRef50_A2STJ5 Cluster: Peptidase M50; n=1; Methanocorpusculum ... 33 5.0
UniRef50_UPI0000E46C69 Cluster: PREDICTED: similar to protein ty... 33 6.6
UniRef50_Q31JD0 Cluster: Thiamine biosynthesis oxidoreductase; n... 33 6.6
UniRef50_A6SM25 Cluster: Putative uncharacterized protein; n=1; ... 33 6.6
UniRef50_A0W712 Cluster: Glycosyl transferase, group 1; n=1; Geo... 33 8.7
UniRef50_Q5QMF2 Cluster: Transport protein-like; n=1; Oryza sati... 33 8.7
UniRef50_Q6C3M0 Cluster: Similarity; n=1; Yarrowia lipolytica|Re... 33 8.7
UniRef50_Q6BXK5 Cluster: Similar to sp|P08640 Saccharomyces cere... 33 8.7
UniRef50_Q5JJ70 Cluster: Hypothetical membrane protein, conserve... 33 8.7
>UniRef50_Q6AW70 Cluster: Coat protein; n=1; Bombyx mori Macula-like
latent virus|Rep: Coat protein - Bombyx mori Macula-like
latent virus
Length = 237
Score = 226 bits (552), Expect = 5e-58
Identities = 112/136 (82%), Positives = 113/136 (83%)
Frame = +3
Query: 234 PFSTPVLDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKIPVTVD 413
PF DLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKIPVTVD
Sbjct: 78 PFQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKIPVTVD 137
Query: 414 LCWTTADVTVEGVNVLGHPFIRSHYYWRSRP*HQATLPCDLGYINPIIKSPIPYTNHPRL 593
LCWTTADVTVEG NVL P HQATLPCDLGYINPIIKSPIPYTNHPRL
Sbjct: 138 LCWTTADVTVEGFNVLATPSSARITMGGLALMHQATLPCDLGYINPIIKSPIPYTNHPRL 197
Query: 594 NIYFHQSPDAVLEXVR 641
NI+FHQS DAVLE VR
Sbjct: 198 NIHFHQSADAVLEGVR 213
Score = 115 bits (276), Expect = 1e-24
Identities = 98/232 (42%), Positives = 115/232 (49%), Gaps = 5/232 (2%)
Frame = +1
Query: 7 QEIVPLVVSAASAIPSLVNAFSSSKPPQTDNPSARSMDMQXXXXXXXXXXXXXXXXXXXX 186
+EIVPLVVSAASAIPSLVNAFSSSKPPQTDNPSARSMDMQ
Sbjct: 2 EEIVPLVVSAASAIPSLVNAFSSSKPPQTDNPSARSMDMQPLPSSDSVVLSSQPLPPAPP 61
Query: 187 XXXXXXXXXXXQRLIIPFQRLYLILLAPKPNRTVSLCNHYRTSP-PSSKATATRILSILK 363
QRLIIPFQRLY L T S ++ P SS R ++
Sbjct: 62 PPLGSSLGRSPQRLIIPFQRLYFDLTG---TETKSNSVTVQSLPNVSSIIKGYRDAYLVN 118
Query: 364 LSFFLPPLASKYQSQLTFVGLLLTS---QLKESMCWATPSSARITIGGLALSIKLPSPA- 531
L + P A + +T V L T+ ++ ATPSSARIT+GGLAL + P
Sbjct: 119 LEAVVFPSAPSLKIPVT-VDLCWTTADVTVEGFNVLATPSSARITMGGLALMHQATLPCD 177
Query: 532 ISATSTRSSNPRFHTPTTPDLTSISINPLTPY*XEFAAGVKASVVIRGSISV 687
+ + +P +T P L AGVKASVVIRGSISV
Sbjct: 178 LGYINPIIKSPIPYT-NHPRLNIHFHQSADAVLEGVRAGVKASVVIRGSISV 228
>UniRef50_Q8UZB5 Cluster: Coat protein; n=1; Grapevine fleck
virus|Rep: Coat protein - Grapevine fleck virus
Length = 230
Score = 83.8 bits (198), Expect = 4e-15
Identities = 50/132 (37%), Positives = 68/132 (51%), Gaps = 1/132 (0%)
Frame = +3
Query: 234 PFSTPVLDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKIPVTVD 413
PF D+TGTE+ S+++ S P V ++ + YR A L +LEA V P+A S P TVD
Sbjct: 69 PFQFLWYDITGTESSYTSLSIASRPEVVTVARPYRHARLTSLEAFVQPTASSATYPQTVD 128
Query: 414 LCWTTADVTVEGVNVLGHPFIRSHYYWRS-RP*HQATLPCDLGYINPIIKSPIPYTNHPR 590
LCWT VT +L F W S LP +L +NP IK + YT+ PR
Sbjct: 129 LCWTIDSVTPARSEILS-VFGAQRIAWGSVHFSAPILLPAELSSLNPTIKDSVTYTDCPR 187
Query: 591 LNIYFHQSPDAV 626
L F+++ V
Sbjct: 188 LTCGFYRNDACV 199
>UniRef50_Q71EB5 Cluster: 25kDa coat protein; n=1; Grapevine Red
Globe virus|Rep: 25kDa coat protein - Grapevine Red
Globe virus
Length = 235
Score = 79.4 bits (187), Expect = 8e-14
Identities = 46/141 (32%), Positives = 67/141 (47%), Gaps = 1/141 (0%)
Frame = +3
Query: 204 PGTVSSTFDHPFSTPVLDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSA 383
P S D PF DLT ET S+ + S P S+ Y A L +LE VFP
Sbjct: 62 PPLASPYVDLPFQFIFYDLTNAETGFTSLDLASKPPFLSLTSPYAYAVLQSLELTVFPKN 121
Query: 384 PSLKIPVTVDLCWTTADVTVEGVNVLG-HPFIRSHYYWRSRP*HQATLPCDLGYINPIIK 560
PS P++ D W ++ V++ G +L + R + + LP DL NP++K
Sbjct: 122 PSYTYPMSFDAHWHSSSVSITGSQILSTYGGTRVTFGGPITSSNPIILPADLRSTNPVVK 181
Query: 561 SPIPYTNHPRLNIYFHQSPDA 623
+ Y N P+L + FH++ DA
Sbjct: 182 DTVSYNNTPKLTVAFHKNTDA 202
>UniRef50_Q9IW08 Cluster: Replicase-associated protein; n=10;
Tymoviridae|Rep: Replicase-associated protein -
Poinsettia mosaic virus
Length = 1987
Score = 61.7 bits (143), Expect = 2e-08
Identities = 36/122 (29%), Positives = 59/122 (48%)
Frame = +3
Query: 234 PFSTPVLDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKIPVTVD 413
PF T +D+ + + + ++S I YR A L L+A+V P+A S + P+T+D
Sbjct: 1821 PFQTVAMDVVAAGGNA-TFNLAGHVSLSEITAPYRKARLAELKAIVCPTAASFQSPITLD 1879
Query: 414 LCWTTADVTVEGVNVLGHPFIRSHYYWRSRP*HQATLPCDLGYINPIIKSPIPYTNHPRL 593
L W+T +V + +L H L DL Y+NP+IK + Y + P+L
Sbjct: 1880 LVWSTNNVIFTDLQILQVYGGTRFAIGGPLLSHTYELRADLSYLNPVIKDSVSYVDTPKL 1939
Query: 594 NI 599
+
Sbjct: 1940 TL 1941
>UniRef50_Q3HWZ1 Cluster: Polyprotein; n=7; Citrus sudden
death-associated virus|Rep: Polyprotein - Citrus sudden
death-associated virus
Length = 2189
Score = 61.3 bits (142), Expect = 2e-08
Identities = 38/134 (28%), Positives = 62/134 (46%), Gaps = 4/134 (2%)
Frame = +3
Query: 207 GTVSSTFDHPFSTPVLDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAP 386
G + + D+PF V G+E K+ S + ++ ++ YR A L ++E V P A
Sbjct: 2025 GLNAPSVDYPFQWVVASYDGSEAKNLSDDLSGSATLTKVMANYRHAELTSVELEVCPLAA 2084
Query: 387 SLKIPVTVDLCWTTADVTVEGVNVL----GHPFIRSHYYWRSRP*HQATLPCDLGYINPI 554
+ P++V WT A ++ + G F S H LP DL +NP+
Sbjct: 2085 AFSKPISVSAVWTIASISPASASETSYYGGRLFTVGGPVLMSSTTH---LPADLTRLNPV 2141
Query: 555 IKSPIPYTNHPRLN 596
+K P+ YT+ PR +
Sbjct: 2142 LKGPVKYTDCPRFS 2155
>UniRef50_P20124 Cluster: Coat protein; n=10; Tymovirus|Rep: Coat
protein - Ononis yellow mosaic virus
Length = 192
Score = 61.3 bits (142), Expect = 2e-08
Identities = 44/143 (30%), Positives = 67/143 (46%), Gaps = 4/143 (2%)
Frame = +3
Query: 204 PGTVSSTFDHPFSTPVLDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSA 383
PG S + PF V DL G S +T+ S P ++ + YR A +V EAV+FP++
Sbjct: 25 PGQQSPSMVVPFQVSVSDL-GVSEVSAQITLSSDPTLAQLTSIYRMASIVECEAVLFPNS 83
Query: 384 PSLKIPVTVDLCWTTADVTVEGVNVL----GHPFIRSHYYWRSRP*HQATLPCDLGYINP 551
S K PV DL W ++ + +L G+ F ++ + P L +NP
Sbjct: 84 TSSKNPVHCDLIWVPSNSSASPKTILQTYGGNRFTVGGPITSNQ---IISFPLRLDSVNP 140
Query: 552 IIKSPIPYTNHPRLNIYFHQSPD 620
IIK + Y + PRL + P+
Sbjct: 141 IIKDSVLYLDSPRLLAFSPAPPE 163
>UniRef50_P19128 Cluster: Coat protein; n=9; Tymovirus|Rep: Coat
protein - Cacao yellow mosaic virus
Length = 188
Score = 58.4 bits (135), Expect = 2e-07
Identities = 37/128 (28%), Positives = 61/128 (47%), Gaps = 4/128 (3%)
Frame = +3
Query: 231 HPFSTPVLDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKIPVTV 410
+PF + L G E ++ V++ + +++ YR A L +L+A++ P+ + P +V
Sbjct: 33 YPFQFTIASL-GVEPTADFVSIAAQAAITAYTSLYRHAILTDLQAIIHPNGYAPAFPTSV 91
Query: 411 DLCWTTADVTVEGVNVL----GHPFIRSHYYWRSRP*HQATLPCDLGYINPIIKSPIPYT 578
L W + T +L G F + P +PC L INPIIK + YT
Sbjct: 92 ALAWVPYNSTATAAKILDVFGGQEFCVGGSINSTSP---IIVPCPLTNINPIIKDSVTYT 148
Query: 579 NHPRLNIY 602
+ P+L IY
Sbjct: 149 DTPKLLIY 156
>UniRef50_P03608 Cluster: Coat protein; n=21; Turnip yellow mosaic
virus|Rep: Coat protein - Turnip yellow mosaic virus
Length = 189
Score = 57.2 bits (132), Expect = 4e-07
Identities = 41/144 (28%), Positives = 62/144 (43%), Gaps = 4/144 (2%)
Frame = +3
Query: 204 PGTVSSTFDHPFSTPVLDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSA 383
PG T PF + VL GT+ S+T+ ++ +VS++ YR A L +L + P+
Sbjct: 24 PGPSPLTIKQPFQSEVL-FAGTKDAEASLTIANIDSVSTLTTFYRHASLESLWVTIHPTL 82
Query: 384 PSLKIPVTVDLCWTTADVTVEGVNVL----GHPFIRSHYYWRSRP*HQATLPCDLGYINP 551
+ P TV +CW A+ V + G F P + C L +NP
Sbjct: 83 QAPTFPTTVGVCWVPANSPVTPAQITKTYGGQIFCIGGAINTLSP---LIVKCPLEMMNP 139
Query: 552 IIKSPIPYTNHPRLNIYFHQSPDA 623
+K I Y + P+L I P A
Sbjct: 140 RVKDSIQYLDSPKLLISITAQPTA 163
>UniRef50_Q8QY74 Cluster: Coat protein; n=1; Passion fruit yellow
mosaic virus|Rep: Coat protein - Passion fruit yellow
mosaic virus
Length = 188
Score = 53.6 bits (123), Expect = 4e-06
Identities = 38/121 (31%), Positives = 57/121 (47%), Gaps = 1/121 (0%)
Frame = +3
Query: 204 PGTVSSTFDHPFSTPVLDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSA 383
PG PF T + L GT S+SV++ + VSS+ YR A L +L A + P+
Sbjct: 28 PGNAPPVIKLPFQTKLASL-GTAEVSDSVSIAANAAVSSLATPYRHARLTSLVATIHPNH 86
Query: 384 PSLKIPVTVDLCWTTADVTVEGVNVLGHPFIRSHYYWRS-RP*HQATLPCDLGYINPIIK 560
S P TV L W + T ++L +S + ++PC+L +NP+IK
Sbjct: 87 LSPSNPTTVSLVWVPFNSTATSSDILNVFGGQSFCIGGAVNSLAAISVPCNLTNVNPVIK 146
Query: 561 S 563
S
Sbjct: 147 S 147
>UniRef50_P35927 Cluster: Coat protein; n=2; Erysimum latent
virus|Rep: Coat protein - Erysimum latent virus (ELV)
Length = 202
Score = 51.2 bits (117), Expect = 2e-05
Identities = 35/112 (31%), Positives = 53/112 (47%), Gaps = 4/112 (3%)
Frame = +3
Query: 279 SNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKIPVTVDLCWTTADVTVEGVNV 458
S ++ + + P +++ + +R A L L AVV PSA S+ P+TV L W A T +
Sbjct: 60 SVTLPLATFPKMATFLSRHRRAQLTQLHAVVSPSAVSIGHPLTVQLIWVPASSTTTSSQI 119
Query: 459 L----GHPFIRSHYYWRSRP*HQATLPCDLGYINPIIKSPIPYTNHPRLNIY 602
L G S P A + +L +NP IK YT+ P+L +Y
Sbjct: 120 LGTYGGQQISVGGQVTNSSP---AKVSANLLMMNPHIKDSTSYTDTPKLLVY 168
>UniRef50_O89519 Cluster: Virion protein; n=2; Tymovirus|Rep: Virion
protein - Dulcamara mottle virus
Length = 188
Score = 50.8 bits (116), Expect = 3e-05
Identities = 32/109 (29%), Positives = 55/109 (50%), Gaps = 4/109 (3%)
Frame = +3
Query: 288 VTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKIPVTVDLCWTTADVTVEGVNVL-- 461
V++ + +++ + GYR A LV L + P+ ++ PVTVD+ W A+ T +L
Sbjct: 52 VSLSASESLAKLTAGYRRAKLVELFLTITPTQLAIDNPVTVDVVWVPANSTATPSKILSV 111
Query: 462 --GHPFIRSHYYWRSRP*HQATLPCDLGYINPIIKSPIPYTNHPRLNIY 602
G F+ S+ +PC+L +N +IK YT+ P+L +Y
Sbjct: 112 YGGQRFLIGGTLTTSQ---VIRVPCNLQSVNAMIKDSTIYTDSPKLLVY 157
>UniRef50_O89518 Cluster: Virion protein; n=1; Wild cucumber mosaic
virus|Rep: Virion protein - Wild cucumber mosaic virus
Length = 188
Score = 50.0 bits (114), Expect = 5e-05
Identities = 31/133 (23%), Positives = 64/133 (48%), Gaps = 4/133 (3%)
Frame = +3
Query: 216 SSTFDHPFSTPVLDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLK 395
S +F F V + G + S+ +++ S P + + +R A L++ +A++ P +
Sbjct: 29 SPSFPFKFQIHVANF-GPKEVSSQISLSSCPELLRLTSLFRHARLLSAKAIITPFDGVVS 87
Query: 396 IPVTVDLCWTTADVTVEGVNVL----GHPFIRSHYYWRSRP*HQATLPCDLGYINPIIKS 563
+P+TVDL W +A+ ++L G + +RP LP + +N ++K
Sbjct: 88 LPITVDLAWVSANSPASPTDILKIYGGSSYTFGGAINSTRP---IELPLPINSVNDMLKD 144
Query: 564 PIPYTNHPRLNIY 602
+ Y + P+L ++
Sbjct: 145 SVSYLDTPKLLVF 157
>UniRef50_P89920 Cluster: Replicase-associated polyprotein; n=5; Oat
blue dwarf virus|Rep: Replicase-associated polyprotein -
Oat blue dwarf virus
Length = 2066
Score = 46.0 bits (104), Expect = 9e-04
Identities = 32/124 (25%), Positives = 52/124 (41%), Gaps = 3/124 (2%)
Frame = +3
Query: 228 DHPFSTPVLDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKIPVT 407
D PF V G K + + ++S + GYR A L++ E P A + P++
Sbjct: 1907 DVPFQWAVASYAGDSAKFLTDDLSGSSHLSRLTIGYRHAELISAELEFAPLAAAFAKPIS 1966
Query: 408 VDLCWTTADVTVEGVNVLGHPFIRSHYYWRSRP*HQAT---LPCDLGYINPIIKSPIPYT 578
V WT A + L + P + +P DL +NP+IK+ + +T
Sbjct: 1967 VTAVWTIASIAPATTTEL--QYYGGRLLTLGGPVLMGSVTRIPADLTRLNPVIKTAVGFT 2024
Query: 579 NHPR 590
+ PR
Sbjct: 2025 DCPR 2028
>UniRef50_P15158 Cluster: Coat protein; n=9; Tymovirus|Rep: Coat
protein - Belladonna mottle virus (BMDV)
Length = 190
Score = 43.6 bits (98), Expect = 0.005
Identities = 28/119 (23%), Positives = 56/119 (47%), Gaps = 6/119 (5%)
Frame = +3
Query: 264 GTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKIPVTVDLCWTTADVTV 443
GT + V++Q+ ++ + YR A +V +A++ P+ ++ P+TV L W A+
Sbjct: 44 GTAETAAQVSLQTADPITKLTAPYRHAQIVECKAILTPTDLAVSNPLTVYLAWVPANSPA 103
Query: 444 EGVNVL------GHPFIRSHYYWRSRP*HQATLPCDLGYINPIIKSPIPYTNHPRLNIY 602
+L G F+ ++ +P +L +N ++K + YT+ P+L Y
Sbjct: 104 TPTQILKLRVYGGQSFVLGGAISAAK---TIEVPLNLDSVNRMLKDSVTYTDTPKLLAY 159
>UniRef50_Q0IKR9 Cluster: Polyprotein; n=8; Tymoviridae|Rep:
Polyprotein - Grapevine rupestris vein feathering virus
Length = 2068
Score = 36.7 bits (81), Expect = 0.53
Identities = 26/88 (29%), Positives = 38/88 (43%), Gaps = 1/88 (1%)
Frame = +3
Query: 333 YRDAYLVNLEAVVFPSAPSLKIPVTVDLCWTTADVT-VEGVNVLGHPFIRSHYYWRSRP* 509
+R + LE V+ P+ + PVT+ W + G +L +
Sbjct: 1947 FRSCEITQLEVVLMPTLNAFNNPVTLHCVWRVNSIQPASGDELLYYGGQAITAGGPVSMN 2006
Query: 510 HQATLPCDLGYINPIIKSPIPYTNHPRL 593
AT+P DL INP IKS + Y + PRL
Sbjct: 2007 ALATVPADLTRINPRIKSSVGYLDTPRL 2034
>UniRef50_A7CUH6 Cluster: Putative uncharacterized protein; n=1;
Opitutaceae bacterium TAV2|Rep: Putative uncharacterized
protein - Opitutaceae bacterium TAV2
Length = 338
Score = 35.1 bits (77), Expect = 1.6
Identities = 28/98 (28%), Positives = 41/98 (41%), Gaps = 4/98 (4%)
Frame = +1
Query: 319 PSSKATATRI----LSILKLSFFLPPLASKYQSQLTFVGLLLTSQLKESMCWATPSSARI 486
PS+ TAT S+ S PP S + + +M TPS R+
Sbjct: 16 PSTATTATCFSTTGASVPSRSITNPPFRSSFPPPPPISSPSTNTHPPRNMKTTTPSRIRV 75
Query: 487 TIGGLALSIKLPSPAISATSTRSSNPRFHTPTTPDLTS 600
T+ L S+ LP+ A++A T + F T TP T+
Sbjct: 76 TLAALIGSLLLPASALAA-GTEVFSTSFETTNTPSWTN 112
>UniRef50_UPI000050FF1B Cluster: COG1122: ABC-type cobalt transport
system, ATPase component; n=1; Brevibacterium linens
BL2|Rep: COG1122: ABC-type cobalt transport system,
ATPase component - Brevibacterium linens BL2
Length = 479
Score = 34.7 bits (76), Expect = 2.2
Identities = 16/43 (37%), Positives = 24/43 (55%)
Frame = -1
Query: 578 GVWNRGFDDRVDVAEIAGEGSLMLRARPPIVMRADEGVAQHID 450
G+W+ DRV+ AE++ ++ L AR V RA V H+D
Sbjct: 219 GIWDTREQDRVEQAEVSAPTAVALSARGLSVTRAGAAVLDHVD 261
>UniRef50_A2QU02 Cluster: Similarity: similarities correspond to
multiple threonine and proline residues; n=2;
Aspergillus|Rep: Similarity: similarities correspond to
multiple threonine and proline residues - Aspergillus
niger
Length = 699
Score = 34.7 bits (76), Expect = 2.2
Identities = 18/42 (42%), Positives = 22/42 (52%)
Frame = +1
Query: 469 PSSARITIGGLALSIKLPSPAISATSTRSSNPRFHTPTTPDL 594
P +T G + K P P + TSTR+SNP HTP P L
Sbjct: 15 PQPQPVTSGRITRPRK-PHPPKATTSTRTSNPAAHTPNQPPL 55
>UniRef50_Q5KBM3 Cluster: Putative uncharacterized protein; n=2;
Filobasidiella neoformans|Rep: Putative uncharacterized
protein - Cryptococcus neoformans (Filobasidiella
neoformans)
Length = 541
Score = 34.3 bits (75), Expect = 2.9
Identities = 25/81 (30%), Positives = 40/81 (49%), Gaps = 1/81 (1%)
Frame = +1
Query: 316 PPSSKATATRILSILKLSFFLPPLASKYQSQLTFVGLLLTSQLKESMCWATPSSARIT-I 492
P S+ A +RI S+ L S S L+ + S L E++ +TP + T +
Sbjct: 74 PDSTSAAVSRIASVTS-GPTTNELTSNAMSTLSPTTVASDSSLTETLTSSTPVTTSFTPV 132
Query: 493 GGLALSIKLPSPAISATSTRS 555
GLA PSP+I+A+S ++
Sbjct: 133 SGLAFPSVTPSPSITASSYKT 153
>UniRef50_Q086E4 Cluster: Ig domain protein, group 2 domain protein
precursor; n=1; Shewanella frigidimarina NCIMB 400|Rep:
Ig domain protein, group 2 domain protein precursor -
Shewanella frigidimarina (strain NCIMB 400)
Length = 892
Score = 33.9 bits (74), Expect = 3.8
Identities = 21/65 (32%), Positives = 31/65 (47%), Gaps = 2/65 (3%)
Frame = +1
Query: 436 SQLKESMCWATPSS--ARITIGGLALSIKLPSPAISATSTRSSNPRFHTPTTPDLTSISI 609
+ + S+ W++ + A I + GLA S I+ATS SN T T L SI +
Sbjct: 509 ADISTSVTWSSADTLVATIDVNGLANGKAAGSSLITATSGAQSNSTNLTVTDATLNSIDV 568
Query: 610 NPLTP 624
P+ P
Sbjct: 569 TPINP 573
>UniRef50_P40198 Cluster: Carcinoembryonic antigen-related cell
adhesion molecule 3 precursor; n=8; Eutheria|Rep:
Carcinoembryonic antigen-related cell adhesion molecule
3 precursor - Homo sapiens (Human)
Length = 252
Score = 33.9 bits (74), Expect = 3.8
Identities = 17/45 (37%), Positives = 28/45 (62%)
Frame = +1
Query: 379 PPLASKYQSQLTFVGLLLTSQLKESMCWATPSSARITIGGLALSI 513
PP AS ++ + + GLLLT+ L W P++A++TI + LS+
Sbjct: 3 PPSASPHRECIPWQGLLLTASLLN--FWNPPTTAKLTIESMPLSV 45
>UniRef50_Q9HNT5 Cluster: Putative uncharacterized protein; n=1;
Halobacterium salinarum|Rep: Putative uncharacterized
protein - Halobacterium salinarium (Halobacterium
halobium)
Length = 1363
Score = 33.5 bits (73), Expect = 5.0
Identities = 31/101 (30%), Positives = 46/101 (45%), Gaps = 9/101 (8%)
Frame = +3
Query: 198 IFPGTVSS-TFDHPFSTPVLDLTGTETKSNSVTVQSLPNVSSIIKG-------YRDAYLV 353
I GTV+S T D + P LD T+T S +VT V+++ Y+DA
Sbjct: 533 IIEGTVASATLDVNAAQPTLDGVETDTGSTTVTATFSERVAAVDGDPSPNEFVYQDATND 592
Query: 354 NLEAVVFPSAPS-LKIPVTVDLCWTTADVTVEGVNVLGHPF 473
A+ +A I +T+D TTAD+ + V+V F
Sbjct: 593 GAGAITAATASGPASIDLTLDSAVTTADIGTDAVSVRADAF 633
>UniRef50_A2STJ5 Cluster: Peptidase M50; n=1; Methanocorpusculum
labreanum Z|Rep: Peptidase M50 - Methanocorpusculum
labreanum (strain ATCC 43576 / DSM 4855 / Z)
Length = 441
Score = 33.5 bits (73), Expect = 5.0
Identities = 28/99 (28%), Positives = 42/99 (42%)
Frame = +1
Query: 259 LLAPKPNRTVSLCNHYRTSPPSSKATATRILSILKLSFFLPPLASKYQSQLTFVGLLLTS 438
L A KPN+T++L YR +P + T T I L S +P + + +L +
Sbjct: 250 LAATKPNQTITLHGEYRGTPQTYDVTLTSIPPDLSGSVLVPESGAGFIGVSFSEPSVLVN 309
Query: 439 QLKESMCWATPSSARITIGGLALSIKLPSPAISATSTRS 555
L M PSS G L + LP +I+ + S
Sbjct: 310 ALHTLM---YPSSPLGAAGSLLTFVALPFSSIAGSEALS 345
>UniRef50_UPI0000E46C69 Cluster: PREDICTED: similar to protein
tyrosine phosphatase, receptor type, B; n=1;
Strongylocentrotus purpuratus|Rep: PREDICTED: similar to
protein tyrosine phosphatase, receptor type, B -
Strongylocentrotus purpuratus
Length = 1402
Score = 33.1 bits (72), Expect = 6.6
Identities = 26/77 (33%), Positives = 36/77 (46%), Gaps = 4/77 (5%)
Frame = +3
Query: 204 PGTVSSTFDHPFSTPVLDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSA 383
P T+ T FS ++LTG + S+TV S S G R + L+NL AV S
Sbjct: 804 PSTIEDTDQESFSAACVNLTGPGA-TYSMTVNSELGTDSSSNGTRASSLINLVAVP-ASV 861
Query: 384 PSLKI----PVTVDLCW 422
S+ + TVD+ W
Sbjct: 862 ESISVTQYATTTVDIQW 878
>UniRef50_Q31JD0 Cluster: Thiamine biosynthesis oxidoreductase; n=1;
Thiomicrospira crunogena XCL-2|Rep: Thiamine
biosynthesis oxidoreductase - Thiomicrospira crunogena
(strain XCL-2)
Length = 350
Score = 33.1 bits (72), Expect = 6.6
Identities = 22/84 (26%), Positives = 41/84 (48%), Gaps = 1/84 (1%)
Frame = -1
Query: 557 DDRVDVAEIAGEGSLMLRARPPIVMRADEGVAQHIDSFNCDVSSSPTKVNCDWYFEARG- 381
+ +V+ + + + L+ P + + + V++ N + +S T V+ DW F+ARG
Sbjct: 149 EGQVNAQQFMEKSAAFLKEHPSVQWKTYQAVSR---VSNGQIETSDTCVDFDWVFDARGL 205
Query: 380 GRKNDSFKIDKIRVAVAFDDGGDV 309
G K D + +R V + D DV
Sbjct: 206 GAKPDISDLRGVRGEVFWLDAPDV 229
>UniRef50_A6SM25 Cluster: Putative uncharacterized protein; n=1;
Botryotinia fuckeliana B05.10|Rep: Putative
uncharacterized protein - Botryotinia fuckeliana B05.10
Length = 1002
Score = 33.1 bits (72), Expect = 6.6
Identities = 17/55 (30%), Positives = 24/55 (43%)
Frame = +1
Query: 460 WATPSSARITIGGLALSIKLPSPAISATSTRSSNPRFHTPTTPDLTSISINPLTP 624
W+ P+S + I AL P+P+ +A S RS P +P T P P
Sbjct: 817 WSMPASTPVPIQSTALPPPSPAPSATAFSDRSPQPILSSPLNTSFTDTWSQPPPP 871
>UniRef50_A0W712 Cluster: Glycosyl transferase, group 1; n=1;
Geobacter lovleyi SZ|Rep: Glycosyl transferase, group 1
- Geobacter lovleyi SZ
Length = 283
Score = 32.7 bits (71), Expect = 8.7
Identities = 16/38 (42%), Positives = 22/38 (57%), Gaps = 2/38 (5%)
Frame = +3
Query: 267 TETKSNSVTVQSLPNVSSI--IKGYRDAYLVNLEAVVF 374
TE V SLPN +SI ++GYRD YL + ++F
Sbjct: 63 TEFTGRGFNVISLPNYASIKLLEGYRDDYLTRTDRIIF 100
>UniRef50_Q5QMF2 Cluster: Transport protein-like; n=1; Oryza sativa
(japonica cultivar-group)|Rep: Transport protein-like -
Oryza sativa subsp. japonica (Rice)
Length = 287
Score = 32.7 bits (71), Expect = 8.7
Identities = 24/68 (35%), Positives = 33/68 (48%), Gaps = 1/68 (1%)
Frame = +1
Query: 385 LASKYQSQLTFVGLLLTSQLKESMCWATPSSARITIGGLALSIKLPSPAISATSTRSSNP 564
L ++ + + V L S L C P+ + GGL L+ +L S A S +TRSS
Sbjct: 168 LMGRFNRRSSVVELTAASGLCSLACVVIPADPEASTGGLRLAAELSSFA-SCETTRSSGA 226
Query: 565 R-FHTPTT 585
R TPTT
Sbjct: 227 RVVTTPTT 234
>UniRef50_Q6C3M0 Cluster: Similarity; n=1; Yarrowia lipolytica|Rep:
Similarity - Yarrowia lipolytica (Candida lipolytica)
Length = 784
Score = 32.7 bits (71), Expect = 8.7
Identities = 20/53 (37%), Positives = 30/53 (56%)
Frame = +1
Query: 463 ATPSSARITIGGLALSIKLPSPAISATSTRSSNPRFHTPTTPDLTSISINPLT 621
ATPSSA + +++ PS I T+T +S+P T TP L+S + P+T
Sbjct: 276 ATPSSAASSTCSSPVAVTAPSSPIVTTTTDASSPAV-TTATPLLSSSATLPVT 327
>UniRef50_Q6BXK5 Cluster: Similar to sp|P08640 Saccharomyces
cerevisiae YIR019c STA1 extracellular alpha-1; n=1;
Debaryomyces hansenii|Rep: Similar to sp|P08640
Saccharomyces cerevisiae YIR019c STA1 extracellular
alpha-1 - Debaryomyces hansenii (Yeast) (Torulaspora
hansenii)
Length = 703
Score = 32.7 bits (71), Expect = 8.7
Identities = 27/101 (26%), Positives = 48/101 (47%), Gaps = 1/101 (0%)
Frame = +1
Query: 262 LAPKPNRTVSLCNHYRTSPPSSKATATRILSI-LKLSFFLPPLASKYQSQLTFVGLLLTS 438
+AP + T S C + +S + T S+ L S ++ S + + L+S
Sbjct: 205 VAPSSSHTTSSCTTSSSLLTTSSCSTTSSSSVALSSSLTTSSCSTTSSSVASSSSVALSS 264
Query: 439 QLKESMCWATPSSARITIGGLALSIKLPSPAISATSTRSSN 561
L S+C +T SS+ + +ALS + SP+ TS+ S++
Sbjct: 265 SLTTSLC-STTSSSGASSSPVALSSSVVSPSSVVTSSCSTS 304
>UniRef50_Q5JJ70 Cluster: Hypothetical membrane protein, conserved;
n=1; Thermococcus kodakarensis KOD1|Rep: Hypothetical
membrane protein, conserved - Pyrococcus kodakaraensis
(Thermococcus kodakaraensis)
Length = 541
Score = 32.7 bits (71), Expect = 8.7
Identities = 16/46 (34%), Positives = 25/46 (54%)
Frame = +3
Query: 309 NVSSIIKGYRDAYLVNLEAVVFPSAPSLKIPVTVDLCWTTADVTVE 446
NVS +KG ++ Y V+ VV P SL + +D ++ + TVE
Sbjct: 180 NVSLSVKGVKELYSVSKSMVVAPGYSSLVFEIPIDSKYSEGEYTVE 225
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 635,328,922
Number of Sequences: 1657284
Number of extensions: 12219089
Number of successful extensions: 43313
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 40579
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 43176
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 54132236449
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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