Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060981.seq
         (689 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U42403-1|AAB02355.1| 1180|Drosophila melanogaster stripe a prote...    29   4.5  
AE014297-2437|AAF55492.1| 1186|Drosophila melanogaster CG7847-PA...    29   4.5  

>U42403-1|AAB02355.1| 1180|Drosophila melanogaster stripe a protein
           protein.
          Length = 1180

 Score = 29.5 bits (63), Expect = 4.5
 Identities = 26/69 (37%), Positives = 40/69 (57%), Gaps = 4/69 (5%)
 Frame = +1

Query: 424 LLLTSQLKESMCWATPSSARITIG-GLA-LSIKLPSPAISATSTRSSNPR--FHTPTTPD 591
           L++ SQ   S   +  SSA  T   GL+  ++ L + A +AT++ S+N +   +TPTTP 
Sbjct: 11  LIVGSQQHPSATSSASSSAGATSSPGLSGQNLNLVAGAGAATNSTSANSQDSLNTPTTP- 69

Query: 592 LTSISINPL 618
           L  +S NPL
Sbjct: 70  LLGLSRNPL 78


>AE014297-2437|AAF55492.1| 1186|Drosophila melanogaster CG7847-PA,
           isoform A protein.
          Length = 1186

 Score = 29.5 bits (63), Expect = 4.5
 Identities = 26/69 (37%), Positives = 40/69 (57%), Gaps = 4/69 (5%)
 Frame = +1

Query: 424 LLLTSQLKESMCWATPSSARITIG-GLA-LSIKLPSPAISATSTRSSNPR--FHTPTTPD 591
           L++ SQ   S   +  SSA  T   GL+  ++ L + A +AT++ S+N +   +TPTTP 
Sbjct: 11  LIVGSQQHPSATSSASSSAGATSSPGLSGQNLNLVAGAGAATNSTSANSQDSLNTPTTP- 69

Query: 592 LTSISINPL 618
           L  +S NPL
Sbjct: 70  LLGLSRNPL 78


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,441,279
Number of Sequences: 53049
Number of extensions: 564701
Number of successful extensions: 2190
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2043
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2185
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3005453946
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)