Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060981.seq
(689 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U40801-6|AAO91729.1| 450|Caenorhabditis elegans Hypothetical pr... 32 0.44
U40801-5|AAO91727.1| 777|Caenorhabditis elegans Hypothetical pr... 32 0.44
U40801-4|AAO91728.1| 873|Caenorhabditis elegans Hypothetical pr... 32 0.44
U40801-3|AAV34792.1| 1134|Caenorhabditis elegans Hypothetical pr... 32 0.44
AF098999-3|AAC68726.2| 445|Caenorhabditis elegans Hypothetical ... 29 2.4
U41263-13|AAC24428.2| 1844|Caenorhabditis elegans Hypothetical p... 29 4.1
U29535-9|AAK31453.2| 2148|Caenorhabditis elegans Hypothetical pr... 29 4.1
U51998-6|ABS83845.1| 825|Caenorhabditis elegans Hypothetical pr... 28 5.5
U23525-4|AAU05558.1| 455|Caenorhabditis elegans Nematode astaci... 28 5.5
U23525-3|AAC46566.2| 579|Caenorhabditis elegans Nematode astaci... 28 5.5
AF548287-1|AAN40683.1| 2238|Caenorhabditis elegans poly ADP-ribo... 28 5.5
AF047664-2|AAC04454.2| 2276|Caenorhabditis elegans Poly(adp-ribo... 28 5.5
AF047664-1|AAO12392.1| 2238|Caenorhabditis elegans Poly(adp-ribo... 28 5.5
AC006797-1|AAF60743.1| 1079|Caenorhabditis elegans Hypothetical ... 28 5.5
AC006761-2|AAF60547.1| 402|Caenorhabditis elegans Hypothetical ... 28 5.5
AC024772-3|AAF60538.1| 2344|Caenorhabditis elegans Hypothetical ... 28 7.2
Z81593-12|CAB04744.1| 1274|Caenorhabditis elegans Hypothetical p... 27 9.6
U97194-8|AAB52447.3| 1254|Caenorhabditis elegans Prion-like-(q/n... 27 9.6
U23178-5|AAN63417.1| 439|Caenorhabditis elegans Vh1 dual-specif... 27 9.6
U23178-4|AAK68300.1| 606|Caenorhabditis elegans Vh1 dual-specif... 27 9.6
U23178-3|AAK68299.1| 657|Caenorhabditis elegans Vh1 dual-specif... 27 9.6
AY585194-1|AAS91377.1| 657|Caenorhabditis elegans VH1-like phos... 27 9.6
AL023822-2|CAA19440.1| 1274|Caenorhabditis elegans Hypothetical ... 27 9.6
>U40801-6|AAO91729.1| 450|Caenorhabditis elegans Hypothetical
protein F28E10.1d protein.
Length = 450
Score = 31.9 bits (69), Expect = 0.44
Identities = 20/60 (33%), Positives = 28/60 (46%)
Frame = +1
Query: 427 LLTSQLKESMCWATPSSARITIGGLALSIKLPSPAISATSTRSSNPRFHTPTTPDLTSIS 606
L+TS ++E T S ++I LA + P+P + S NP FH T P T S
Sbjct: 81 LMTSPIEEEPEGLTSSIRDLSIRSLAKETERPAPVFTPPSPPKENP-FHVMTVPKSTLTS 139
>U40801-5|AAO91727.1| 777|Caenorhabditis elegans Hypothetical
protein F28E10.1b protein.
Length = 777
Score = 31.9 bits (69), Expect = 0.44
Identities = 20/60 (33%), Positives = 28/60 (46%)
Frame = +1
Query: 427 LLTSQLKESMCWATPSSARITIGGLALSIKLPSPAISATSTRSSNPRFHTPTTPDLTSIS 606
L+TS ++E T S ++I LA + P+P + S NP FH T P T S
Sbjct: 623 LMTSPIEEEPEGLTSSIRDLSIRSLAKETERPAPVFTPPSPPKENP-FHVMTVPKSTLTS 681
>U40801-4|AAO91728.1| 873|Caenorhabditis elegans Hypothetical
protein F28E10.1c protein.
Length = 873
Score = 31.9 bits (69), Expect = 0.44
Identities = 20/60 (33%), Positives = 28/60 (46%)
Frame = +1
Query: 427 LLTSQLKESMCWATPSSARITIGGLALSIKLPSPAISATSTRSSNPRFHTPTTPDLTSIS 606
L+TS ++E T S ++I LA + P+P + S NP FH T P T S
Sbjct: 719 LMTSPIEEEPEGLTSSIRDLSIRSLAKETERPAPVFTPPSPPKENP-FHVMTVPKSTLTS 777
>U40801-3|AAV34792.1| 1134|Caenorhabditis elegans Hypothetical
protein F28E10.1a protein.
Length = 1134
Score = 31.9 bits (69), Expect = 0.44
Identities = 20/60 (33%), Positives = 28/60 (46%)
Frame = +1
Query: 427 LLTSQLKESMCWATPSSARITIGGLALSIKLPSPAISATSTRSSNPRFHTPTTPDLTSIS 606
L+TS ++E T S ++I LA + P+P + S NP FH T P T S
Sbjct: 765 LMTSPIEEEPEGLTSSIRDLSIRSLAKETERPAPVFTPPSPPKENP-FHVMTVPKSTLTS 823
>AF098999-3|AAC68726.2| 445|Caenorhabditis elegans Hypothetical
protein W04C9.3 protein.
Length = 445
Score = 29.5 bits (63), Expect = 2.4
Identities = 19/60 (31%), Positives = 29/60 (48%)
Frame = +3
Query: 240 STPVLDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKIPVTVDLC 419
S P+LD G + V LP+++S AY+ +EA+ FP PS+ + LC
Sbjct: 209 SFPLLDENGCSVSRDFPQVVYLPSLTS-------AYMA-IEAISFPDQPSISFSCQIKLC 260
>U41263-13|AAC24428.2| 1844|Caenorhabditis elegans Hypothetical
protein T19D12.1 protein.
Length = 1844
Score = 28.7 bits (61), Expect = 4.1
Identities = 19/55 (34%), Positives = 27/55 (49%)
Frame = +1
Query: 463 ATPSSARITIGGLALSIKLPSPAISATSTRSSNPRFHTPTTPDLTSISINPLTPY 627
AT +S+ IT G + S S A+S+T+T S TP T S ++PY
Sbjct: 817 ATSTSSVITTG--STSAPQSSTAVSSTTTSPSTTTGSTPAPQSSTVASTTTVSPY 869
>U29535-9|AAK31453.2| 2148|Caenorhabditis elegans Hypothetical
protein C25H3.8 protein.
Length = 2148
Score = 28.7 bits (61), Expect = 4.1
Identities = 17/49 (34%), Positives = 25/49 (51%)
Frame = +3
Query: 252 LDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKI 398
LDL G + + V + PNV S + +L NL++V +AP L I
Sbjct: 202 LDLVGEKAFQQAAFVLTSPNVFSRRFDLNNKFLRNLDSVFSKNAPDLTI 250
>U51998-6|ABS83845.1| 825|Caenorhabditis elegans Hypothetical
protein C12D12.1c protein.
Length = 825
Score = 28.3 bits (60), Expect = 5.5
Identities = 14/36 (38%), Positives = 21/36 (58%)
Frame = +1
Query: 520 PSPAISATSTRSSNPRFHTPTTPDLTSISINPLTPY 627
P+P + T+T +NP TPTT TS N ++P+
Sbjct: 490 PTPVPTTTNTPPANPTTATPTTVG-TSKQTNTISPH 524
>U23525-4|AAU05558.1| 455|Caenorhabditis elegans Nematode astacin
protease protein11, isoform b protein.
Length = 455
Score = 28.3 bits (60), Expect = 5.5
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = -2
Query: 91 FEGVWKKRKH*PRTEWPKRQKRLKAQFPG 5
F+ V KK +H R EW + K+ +FPG
Sbjct: 94 FKDVHKKHRHLGRKEWKGKVKQFCHRFPG 122
>U23525-3|AAC46566.2| 579|Caenorhabditis elegans Nematode astacin
protease protein11, isoform a protein.
Length = 579
Score = 28.3 bits (60), Expect = 5.5
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = -2
Query: 91 FEGVWKKRKH*PRTEWPKRQKRLKAQFPG 5
F+ V KK +H R EW + K+ +FPG
Sbjct: 94 FKDVHKKHRHLGRKEWKGKVKQFCHRFPG 122
>AF548287-1|AAN40683.1| 2238|Caenorhabditis elegans poly ADP-ribose
metabolism enzyme-5 protein.
Length = 2238
Score = 28.3 bits (60), Expect = 5.5
Identities = 15/50 (30%), Positives = 25/50 (50%)
Frame = +1
Query: 337 ATRILSILKLSFFLPPLASKYQSQLTFVGLLLTSQLKESMCWATPSSARI 486
AT ++SILK F + P ++ L G+ L ++S + PS+ I
Sbjct: 2089 ATNLMSILKNGFLIDPPSACKNGNLFGSGIYLADSFEKSTHYCQPSAGGI 2138
>AF047664-2|AAC04454.2| 2276|Caenorhabditis elegans Poly(adp-ribose)
metabolism enzymeprotein 5, isoform a protein.
Length = 2276
Score = 28.3 bits (60), Expect = 5.5
Identities = 15/50 (30%), Positives = 25/50 (50%)
Frame = +1
Query: 337 ATRILSILKLSFFLPPLASKYQSQLTFVGLLLTSQLKESMCWATPSSARI 486
AT ++SILK F + P ++ L G+ L ++S + PS+ I
Sbjct: 2127 ATNLMSILKNGFLIDPPSACKNGNLFGSGIYLADSFEKSTHYCQPSAGGI 2176
>AF047664-1|AAO12392.1| 2238|Caenorhabditis elegans Poly(adp-ribose)
metabolism enzymeprotein 5, isoform b protein.
Length = 2238
Score = 28.3 bits (60), Expect = 5.5
Identities = 15/50 (30%), Positives = 25/50 (50%)
Frame = +1
Query: 337 ATRILSILKLSFFLPPLASKYQSQLTFVGLLLTSQLKESMCWATPSSARI 486
AT ++SILK F + P ++ L G+ L ++S + PS+ I
Sbjct: 2089 ATNLMSILKNGFLIDPPSACKNGNLFGSGIYLADSFEKSTHYCQPSAGGI 2138
>AC006797-1|AAF60743.1| 1079|Caenorhabditis elegans Hypothetical
protein Y51B11A.1 protein.
Length = 1079
Score = 28.3 bits (60), Expect = 5.5
Identities = 27/113 (23%), Positives = 41/113 (36%), Gaps = 2/113 (1%)
Frame = +1
Query: 268 PKPNRTVSLCNHYRTSPPSSKATA--TRILSILKLSFFLPPLASKYQSQLTFVGLLLTSQ 441
P N T + T PPSS T T + + + PP +S Q T + T+
Sbjct: 371 PVQNTTTTAPETTSTEPPSSSTTPVQTTTTTAPETTSTEPPSSSTTPVQTTTITAPETTS 430
Query: 442 LKESMCWATPSSARITIGGLALSIKLPSPAISATSTRSSNPRFHTPTTPDLTS 600
+ TP T S + PS + + T ++ T T P +S
Sbjct: 431 TEPPSSSTTPVQTTTTTAPETTSTEPPSSSTTPVQTTTTTAPETTSTEPPSSS 483
>AC006761-2|AAF60547.1| 402|Caenorhabditis elegans Hypothetical
protein Y41G9A.5 protein.
Length = 402
Score = 28.3 bits (60), Expect = 5.5
Identities = 12/35 (34%), Positives = 23/35 (65%), Gaps = 1/35 (2%)
Frame = +1
Query: 523 SPAISATSTRSSNPRFHTPTTPD-LTSISINPLTP 624
SPAI +T+T +++P+ T TP+ +T++ + P
Sbjct: 270 SPAIESTTTTTASPKTSTTLTPEPITTVPAKDVKP 304
>AC024772-3|AAF60538.1| 2344|Caenorhabditis elegans Hypothetical
protein Y40C5A.3 protein.
Length = 2344
Score = 27.9 bits (59), Expect = 7.2
Identities = 26/89 (29%), Positives = 44/89 (49%), Gaps = 8/89 (8%)
Frame = +1
Query: 382 PLASKYQSQLTFVGLLLTSQLKESMCWATPSSARITIGGLAL----SIKLPSPAISATST 549
P+A S+ TFV + T + + A+PSS +TI +AL S+ PSPA + T
Sbjct: 373 PVAPGDPSESTFVQIHET-ETPSAPSPASPSSVSVTIPRVALPASVSVPSPSPASNVPVT 431
Query: 550 RSSNPRFHTPTT----PDLTSISINPLTP 624
+ + +P T P+ + ++ P+ P
Sbjct: 432 ITLSAPAKSPATYGPAPEPSRPAVPPVAP 460
>Z81593-12|CAB04744.1| 1274|Caenorhabditis elegans Hypothetical
protein Y102A5A.1 protein.
Length = 1274
Score = 27.5 bits (58), Expect = 9.6
Identities = 18/59 (30%), Positives = 31/59 (52%)
Frame = +1
Query: 298 NHYRTSPPSSKATATRILSILKLSFFLPPLASKYQSQLTFVGLLLTSQLKESMCWATPS 474
NH+ S+ A A L++ L+ +LP + + ++Q LLL + LKE + W + S
Sbjct: 898 NHHHEDLKSAAAQALGALAVGNLNVYLPFILEQIRTQPKKQYLLLHA-LKEVIVWESSS 955
>U97194-8|AAB52447.3| 1254|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 20
protein.
Length = 1254
Score = 27.5 bits (58), Expect = 9.6
Identities = 15/35 (42%), Positives = 20/35 (57%), Gaps = 4/35 (11%)
Frame = +1
Query: 34 AASAIPSLVNAFSSSKPPQTD----NPSARSMDMQ 126
+AS P LVN S+ +PPQ PSA+ + MQ
Sbjct: 476 SASNSPLLVNLLSNQQPPQQQYMYPGPSAQGLSMQ 510
>U23178-5|AAN63417.1| 439|Caenorhabditis elegans Vh1
dual-specificity phosphatasefamily protein 1, isoform c
protein.
Length = 439
Score = 27.5 bits (58), Expect = 9.6
Identities = 14/39 (35%), Positives = 22/39 (56%)
Frame = +1
Query: 511 IKLPSPAISATSTRSSNPRFHTPTTPDLTSISINPLTPY 627
+ LP+PA S++S+ SS P F + +S SI P+
Sbjct: 340 LTLPTPAASSSSSTSSEPSFDFSSFESSSSSSIVVENPF 378
>U23178-4|AAK68300.1| 606|Caenorhabditis elegans Vh1
dual-specificity phosphatasefamily protein 1, isoform b
protein.
Length = 606
Score = 27.5 bits (58), Expect = 9.6
Identities = 14/39 (35%), Positives = 22/39 (56%)
Frame = +1
Query: 511 IKLPSPAISATSTRSSNPRFHTPTTPDLTSISINPLTPY 627
+ LP+PA S++S+ SS P F + +S SI P+
Sbjct: 444 LTLPTPAASSSSSTSSEPSFDFSSFESSSSSSIVVENPF 482
>U23178-3|AAK68299.1| 657|Caenorhabditis elegans Vh1
dual-specificity phosphatasefamily protein 1, isoform a
protein.
Length = 657
Score = 27.5 bits (58), Expect = 9.6
Identities = 14/39 (35%), Positives = 22/39 (56%)
Frame = +1
Query: 511 IKLPSPAISATSTRSSNPRFHTPTTPDLTSISINPLTPY 627
+ LP+PA S++S+ SS P F + +S SI P+
Sbjct: 495 LTLPTPAASSSSSTSSEPSFDFSSFESSSSSSIVVENPF 533
>AY585194-1|AAS91377.1| 657|Caenorhabditis elegans VH1-like
phosphatase 1 protein.
Length = 657
Score = 27.5 bits (58), Expect = 9.6
Identities = 14/39 (35%), Positives = 22/39 (56%)
Frame = +1
Query: 511 IKLPSPAISATSTRSSNPRFHTPTTPDLTSISINPLTPY 627
+ LP+PA S++S+ SS P F + +S SI P+
Sbjct: 495 LTLPTPAASSSSSTSSEPSFDFSSFESSSSSSIVVENPF 533
>AL023822-2|CAA19440.1| 1274|Caenorhabditis elegans Hypothetical
protein Y102A5A.1 protein.
Length = 1274
Score = 27.5 bits (58), Expect = 9.6
Identities = 18/59 (30%), Positives = 31/59 (52%)
Frame = +1
Query: 298 NHYRTSPPSSKATATRILSILKLSFFLPPLASKYQSQLTFVGLLLTSQLKESMCWATPS 474
NH+ S+ A A L++ L+ +LP + + ++Q LLL + LKE + W + S
Sbjct: 898 NHHHEDLKSAAAQALGALAVGNLNVYLPFILEQIRTQPKKQYLLLHA-LKEVIVWESSS 955
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,102,400
Number of Sequences: 27780
Number of extensions: 273000
Number of successful extensions: 1097
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 1013
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1097
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1581836700
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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