Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060981.seq
         (689 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat...    25   0.68 
AY823258-1|AAX18443.1|  145|Apis mellifera pburs protein.              23   2.7  
AM420632-1|CAM06632.1|  145|Apis mellifera bursicon subunit beta...    23   2.7  
DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like recept...    22   6.3  
DQ201783-1|ABB05503.1|  381|Apis mellifera capa receptor-like GP...    21   8.4  

>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
            receptor protein.
          Length = 1040

 Score = 25.0 bits (52), Expect = 0.68
 Identities = 13/39 (33%), Positives = 22/39 (56%)
 Frame = +1

Query: 244  RLYLILLAPKPNRTVSLCNHYRTSPPSSKATATRILSIL 360
            +LY+IL+ P+ N   S+     ++  SS  TAT   S++
Sbjct: 901  KLYIILIRPERNVRQSMMPTRYSTTKSSAVTATNASSMI 939


>AY823258-1|AAX18443.1|  145|Apis mellifera pburs protein.
          Length = 145

 Score = 23.0 bits (47), Expect = 2.7
 Identities = 11/34 (32%), Positives = 17/34 (50%)
 Frame = -1

Query: 491 IVMRADEGVAQHIDSFNCDVSSSPTKVNCDWYFE 390
           I + ++E +AQ  D  NC+   S   +  D Y E
Sbjct: 19  IFIYSNETIAQVTDDENCETLQSEVHITKDEYDE 52


>AM420632-1|CAM06632.1|  145|Apis mellifera bursicon subunit beta
           protein precursor protein.
          Length = 145

 Score = 23.0 bits (47), Expect = 2.7
 Identities = 11/34 (32%), Positives = 17/34 (50%)
 Frame = -1

Query: 491 IVMRADEGVAQHIDSFNCDVSSSPTKVNCDWYFE 390
           I + ++E +AQ  D  NC+   S   +  D Y E
Sbjct: 19  IFIYSNETIAQVTDDENCETLQSEVHITKDEYDE 52


>DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like receptor
           2 protein.
          Length = 581

 Score = 21.8 bits (44), Expect = 6.3
 Identities = 12/58 (20%), Positives = 26/58 (44%)
 Frame = +1

Query: 427 LLTSQLKESMCWATPSSARITIGGLALSIKLPSPAISATSTRSSNPRFHTPTTPDLTS 600
           +  + + E +     S   +T+G  A  ++L +  + ++  ++ N      TTP L S
Sbjct: 479 MAATYMNECLLNIQKSPRTLTLGIFAEKLRLETKELFSSQQKTKNNLMKLETTPVLPS 536


>DQ201783-1|ABB05503.1|  381|Apis mellifera capa receptor-like GPCR
           protein.
          Length = 381

 Score = 21.4 bits (43), Expect = 8.4
 Identities = 10/45 (22%), Positives = 20/45 (44%)
 Frame = +1

Query: 223 RLIIPFQRLYLILLAPKPNRTVSLCNHYRTSPPSSKATATRILSI 357
           R++IP   +Y+I+        ++ C     +P    AT   + S+
Sbjct: 38  RMVIPLTIIYMIIFVTGIFGNITTCTVIIKNPAMQTATNYYLFSL 82


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 167,928
Number of Sequences: 438
Number of extensions: 3649
Number of successful extensions: 10
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21073995
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)