Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060980.seq
         (684 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC041144-1|AAH41144.1|  511|Homo sapiens chromosome 2 open readi...    45   3e-04
AC105054-1|AAY24113.1|  243|Homo sapiens unknown protein.              45   3e-04
EF212155-1|ABN05231.1|  391|Homo sapiens cellular titin isoform ...    41   0.005
X90569-1|CAA62189.1| 7962|Homo sapiens elastic titin protein.          40   0.006
AJ277892-2|CAD12456.1|30017|Homo sapiens Titin protein.                40   0.006

>BC041144-1|AAH41144.1|  511|Homo sapiens chromosome 2 open reading
           frame 13 protein.
          Length = 511

 Score = 44.8 bits (101), Expect = 3e-04
 Identities = 18/31 (58%), Positives = 22/31 (70%), Gaps = 1/31 (3%)
 Frame = +2

Query: 140 NETKRVKKV-CDYGEKCYRMNPVHFREFSHP 229
           +E  +VK+  C YG  CYR NPVHF+ FSHP
Sbjct: 369 SEGNKVKRTSCMYGANCYRKNPVHFQHFSHP 399



 Score = 31.9 bits (69), Expect = 2.2
 Identities = 14/30 (46%), Positives = 17/30 (56%), Gaps = 2/30 (6%)
 Frame = +2

Query: 167 CDYGEKCYRMNPVHFREFSHPHL--ESILD 250
           C YG  CYR NP H  E+ H  L   ++LD
Sbjct: 421 CPYGPSCYRKNPQHKIEYRHNTLPVRNVLD 450


>AC105054-1|AAY24113.1|  243|Homo sapiens unknown protein.
          Length = 243

 Score = 44.8 bits (101), Expect = 3e-04
 Identities = 18/31 (58%), Positives = 22/31 (70%), Gaps = 1/31 (3%)
 Frame = +2

Query: 140 NETKRVKKV-CDYGEKCYRMNPVHFREFSHP 229
           +E  +VK+  C YG  CYR NPVHF+ FSHP
Sbjct: 101 SEGNKVKRTSCMYGANCYRKNPVHFQHFSHP 131



 Score = 31.9 bits (69), Expect = 2.2
 Identities = 14/30 (46%), Positives = 17/30 (56%), Gaps = 2/30 (6%)
 Frame = +2

Query: 167 CDYGEKCYRMNPVHFREFSHPHL--ESILD 250
           C YG  CYR NP H  E+ H  L   ++LD
Sbjct: 153 CPYGPSCYRKNPQHKIEYRHNTLPVRNVLD 182


>EF212155-1|ABN05231.1|  391|Homo sapiens cellular titin isoform
           PEVK variant 3 protein.
          Length = 391

 Score = 40.7 bits (91), Expect = 0.005
 Identities = 25/89 (28%), Positives = 44/89 (49%)
 Frame = +1

Query: 274 PIPDKYNLQKKLITEQLDLIIEKGFYAPRNNVQNNPKQIENKQETDRDNREGXNVGSKIE 453
           P P K    KK +TE+  ++I K   AP   V   PK++E K+       E   V    E
Sbjct: 252 PPPPKVPEIKKKVTEK-KVVIPKKEEAPPAKVPEVPKKVEEKRIILPKEEEVLPVEVTEE 310

Query: 454 PEASSASHQKVPDKPENXKQCFQIMKPKL 540
           PE    S +++P++P + ++  ++  P++
Sbjct: 311 PEEEPISEEEIPEEPPSIEEVEEVAPPRV 339


>X90569-1|CAA62189.1| 7962|Homo sapiens elastic titin protein.
          Length = 7962

 Score = 40.3 bits (90), Expect = 0.006
 Identities = 24/89 (26%), Positives = 44/89 (49%)
 Frame = +1

Query: 274  PIPDKYNLQKKLITEQLDLIIEKGFYAPRNNVQNNPKQIENKQETDRDNREGXNVGSKIE 453
            P+P      KK +TE+  ++I K   AP   V   PK++E K+       E   V    E
Sbjct: 6847 PVPAPVPEIKKKVTEK-KVVIPKKEEAPPAKVPEVPKKVEEKRIILPKEEEVLPVEVTEE 6905

Query: 454  PEASSASHQKVPDKPENXKQCFQIMKPKL 540
            PE    S +++P++P + ++  ++  P++
Sbjct: 6906 PEEEPISEEEIPEEPPSIEEVEEVAPPRV 6934


>AJ277892-2|CAD12456.1|30017|Homo sapiens Titin protein.
          Length = 30000

 Score = 40.3 bits (90), Expect = 0.006
 Identities = 24/89 (26%), Positives = 44/89 (49%)
 Frame = +1

Query: 274   PIPDKYNLQKKLITEQLDLIIEKGFYAPRNNVQNNPKQIENKQETDRDNREGXNVGSKIE 453
             P+P      KK +TE+  ++I K   AP   V   PK++E K+       E   V    E
Sbjct: 11109 PVPAPVPEIKKKVTEK-KVVIPKKEEAPPAKVPEVPKKVEEKRIILPKEEEVLPVEVTEE 11167

Query: 454   PEASSASHQKVPDKPENXKQCFQIMKPKL 540
             PE    S +++P++P + ++  ++  P++
Sbjct: 11168 PEEEPISEEEIPEEPPSIEEVEEVAPPRV 11196


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 93,999,952
Number of Sequences: 237096
Number of extensions: 1901182
Number of successful extensions: 3547
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 3448
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3547
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7783251346
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)