Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060979.seq
         (678 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF592176-1|ABQ95972.2|  661|Anopheles gambiae laccase-3 protein.       23   8.9  
AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodi...    23   8.9  
AJ237706-1|CAB40347.1|  570|Anopheles gambiae putative 5'-nucleo...    23   8.9  

>EF592176-1|ABQ95972.2|  661|Anopheles gambiae laccase-3 protein.
          Length = 661

 Score = 23.0 bits (47), Expect = 8.9
 Identities = 11/33 (33%), Positives = 16/33 (48%)
 Frame = +2

Query: 347 LRTSQRTYLS*PCYRFGSLMTSKSWQNTLLRSS 445
           LR+     L  P   + +   ++SW NTLL  S
Sbjct: 4   LRSHVLVLLGVPVVAYATRANAQSWLNTLLEQS 36


>AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodium
            channel alpha subunitprotein.
          Length = 2139

 Score = 23.0 bits (47), Expect = 8.9
 Identities = 8/15 (53%), Positives = 12/15 (80%)
 Frame = +2

Query: 41   RQTDLEMQLYFYFFL 85
            R+T++ M LYF FF+
Sbjct: 1534 RETNIYMYLYFVFFI 1548


>AJ237706-1|CAB40347.1|  570|Anopheles gambiae putative
           5'-nucleotidase protein.
          Length = 570

 Score = 23.0 bits (47), Expect = 8.9
 Identities = 20/73 (27%), Positives = 36/73 (49%)
 Frame = +1

Query: 361 KNISELTVLSFRKLDDVKKLAKHFTKIINHPITEQSPSIQRYLKNLQETPRG*FSKNATV 540
           KN++ + VLS   LD  K+LA+    +I+  +   S S+   L    + P    +K  T+
Sbjct: 219 KNVNIIVVLSHCGLDGDKQLAEEAGDLIDVIVGAHSHSL--LLNKDAKVPYD--TKYDTI 274

Query: 541 EVEYIFXTEKKSS 579
           E +Y    +K ++
Sbjct: 275 EGDYPLVVKKSNN 287


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 615,819
Number of Sequences: 2352
Number of extensions: 11612
Number of successful extensions: 17
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 68159265
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)