Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060978.seq
(685 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ547798-1|CAD67999.1| 587|Apis mellifera octopamine receptor p... 23 2.7
DQ342041-1|ABC69933.1| 828|Apis mellifera STIP protein. 23 3.6
DQ058012-1|AAY57281.1| 373|Apis mellifera venom allergen acid p... 23 3.6
AY939855-1|AAX33235.1| 388|Apis mellifera venom acid phosphatas... 23 3.6
AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic ac... 23 3.6
AF205594-1|AAQ13840.1| 156|Apis mellifera acid phosphatase prec... 23 3.6
AY338499-1|AAR08420.1| 500|Apis mellifera Kruppel-like protein ... 22 4.7
U26026-1|AAA69069.1| 377|Apis mellifera long-wavelength rhodops... 21 8.3
DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride c... 21 8.3
AF091732-1|AAD02869.2| 154|Apis mellifera long-wavelength rhodo... 21 8.3
AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein. 21 8.3
AB022907-1|BAA86908.1| 615|Apis mellifera glucose oxidase protein. 21 8.3
>AJ547798-1|CAD67999.1| 587|Apis mellifera octopamine receptor
protein.
Length = 587
Score = 23.0 bits (47), Expect = 2.7
Identities = 15/51 (29%), Positives = 26/51 (50%)
Frame = +2
Query: 521 VPLSSYMEDLLTNKISLNAGQRKASYRMGYRGSSTLKLRELASSACKSTDE 673
+P+ S+ E + + S +G R +R S K+REL ++AC + E
Sbjct: 9 LPVKSFRESRCSVRCSAASGLRWFEI---WRDSLPTKMRELNATACAALYE 56
>DQ342041-1|ABC69933.1| 828|Apis mellifera STIP protein.
Length = 828
Score = 22.6 bits (46), Expect = 3.6
Identities = 7/11 (63%), Positives = 9/11 (81%)
Frame = +3
Query: 294 KWFFPRWAQAL 326
K+FFP+W Q L
Sbjct: 648 KFFFPKWLQVL 658
>DQ058012-1|AAY57281.1| 373|Apis mellifera venom allergen acid
phosphatase protein.
Length = 373
Score = 22.6 bits (46), Expect = 3.6
Identities = 9/18 (50%), Positives = 13/18 (72%)
Frame = -2
Query: 84 GSLRLKIIFTYHITDTTP 31
G L +FTY+IT++TP
Sbjct: 202 GELFDATVFTYNITNSTP 219
>AY939855-1|AAX33235.1| 388|Apis mellifera venom acid phosphatase
precursor protein.
Length = 388
Score = 22.6 bits (46), Expect = 3.6
Identities = 9/18 (50%), Positives = 13/18 (72%)
Frame = -2
Query: 84 GSLRLKIIFTYHITDTTP 31
G L +FTY+IT++TP
Sbjct: 217 GELFDATVFTYNITNSTP 234
>AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic
acetylcholine receptorApisa2 subunit protein.
Length = 541
Score = 22.6 bits (46), Expect = 3.6
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = -3
Query: 662 FYRLNLQAPLISVSNFPYNPFYSLPS 585
FY +NL P +S+S FY LP+
Sbjct: 237 FYTVNLIVPCVSISYLSVLAFY-LPA 261
>AF205594-1|AAQ13840.1| 156|Apis mellifera acid phosphatase
precursor protein.
Length = 156
Score = 22.6 bits (46), Expect = 3.6
Identities = 9/18 (50%), Positives = 13/18 (72%)
Frame = -2
Query: 84 GSLRLKIIFTYHITDTTP 31
G L +FTY+IT++TP
Sbjct: 105 GELFDATVFTYNITNSTP 122
>AY338499-1|AAR08420.1| 500|Apis mellifera Kruppel-like protein 1
protein.
Length = 500
Score = 22.2 bits (45), Expect = 4.7
Identities = 9/27 (33%), Positives = 16/27 (59%)
Frame = +1
Query: 442 KLYGILHILQIPQKHY*NKKL*YCTRC 522
K +G H+L++ Q + +K+ CT C
Sbjct: 239 KSFGYNHVLKLHQVAHYGEKVYKCTLC 265
>U26026-1|AAA69069.1| 377|Apis mellifera long-wavelength rhodopsin
protein.
Length = 377
Score = 21.4 bits (43), Expect = 8.3
Identities = 9/32 (28%), Positives = 11/32 (34%)
Frame = +1
Query: 154 FNHPWETVAQAAWRKYPNPMNPAVIGTDVVER 249
F+ W W +Y N GTD R
Sbjct: 178 FSLGWTIAPMFGWNRYVPEGNMTACGTDYFNR 209
>DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 21.4 bits (43), Expect = 8.3
Identities = 7/10 (70%), Positives = 8/10 (80%)
Frame = +2
Query: 137 GHQNTHSTIH 166
GH+ HSTIH
Sbjct: 192 GHRQRHSTIH 201
>AF091732-1|AAD02869.2| 154|Apis mellifera long-wavelength
rhodopsin protein.
Length = 154
Score = 21.4 bits (43), Expect = 8.3
Identities = 9/32 (28%), Positives = 11/32 (34%)
Frame = +1
Query: 154 FNHPWETVAQAAWRKYPNPMNPAVIGTDVVER 249
F+ W W +Y N GTD R
Sbjct: 54 FSLGWTIAPMFGWNRYVPEGNMTACGTDYFNR 85
>AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein.
Length = 898
Score = 21.4 bits (43), Expect = 8.3
Identities = 6/13 (46%), Positives = 10/13 (76%)
Frame = -3
Query: 569 EKFCWLKGLPCNY 531
E C +KG+PC++
Sbjct: 539 EHVCGVKGIPCSW 551
>AB022907-1|BAA86908.1| 615|Apis mellifera glucose oxidase protein.
Length = 615
Score = 21.4 bits (43), Expect = 8.3
Identities = 7/18 (38%), Positives = 10/18 (55%)
Frame = -1
Query: 544 FHVTTERHTLYSTTASCF 491
++ T E H ST SC+
Sbjct: 126 YYTTNESHACLSTGGSCY 143
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 198,174
Number of Sequences: 438
Number of extensions: 4396
Number of successful extensions: 19
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20830365
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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