Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060975.seq
(691 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY051586-1|AAK93010.1| 805|Drosophila melanogaster GH23250p pro... 60 3e-09
AF208397-1|AAF20210.1| 805|Drosophila melanogaster Raw protein. 60 3e-09
AF186024-1|AAF28462.1| 989|Drosophila melanogaster RAW protein. 60 3e-09
AE014134-1558|AAF52706.2| 989|Drosophila melanogaster CG12437-P... 60 3e-09
AE014134-1557|AAF52705.2| 805|Drosophila melanogaster CG12437-P... 60 3e-09
DQ398892-1|ABD61608.1| 2043|Drosophila melanogaster Dicer-1 prot... 29 7.9
DQ398891-1|ABD61607.1| 2043|Drosophila melanogaster Dicer-1 prot... 29 7.9
DQ398889-1|ABD61605.1| 2043|Drosophila melanogaster Dicer-1 prot... 29 7.9
DQ398888-1|ABD61604.1| 2043|Drosophila melanogaster Dicer-1 prot... 29 7.9
DQ398887-1|ABD61603.1| 2043|Drosophila melanogaster Dicer-1 prot... 29 7.9
DQ398886-1|ABD61602.1| 2043|Drosophila melanogaster Dicer-1 prot... 29 7.9
DQ398885-1|ABD61601.1| 2043|Drosophila melanogaster Dicer-1 prot... 29 7.9
AE014297-3226|AAF56056.1| 2249|Drosophila melanogaster CG4792-PA... 29 7.9
>AY051586-1|AAK93010.1| 805|Drosophila melanogaster GH23250p
protein.
Length = 805
Score = 60.1 bits (139), Expect = 3e-09
Identities = 22/30 (73%), Positives = 29/30 (96%)
Frame = +3
Query: 510 GGSCNPTTWRSDIAIPMLKKMGITYFNPQV 599
GGSCNPTTWR+D+AIP LK++GI+++NPQV
Sbjct: 172 GGSCNPTTWRADVAIPALKELGISFYNPQV 201
Score = 31.9 bits (69), Expect = 0.84
Identities = 12/29 (41%), Positives = 19/29 (65%), Gaps = 1/29 (3%)
Frame = +3
Query: 510 GGSCN-PTTWRSDIAIPMLKKMGITYFNP 593
GGSC T WR ++A+P L+ G+++ P
Sbjct: 593 GGSCVLRTKWRQELAVPYLQSKGVSFHTP 621
>AF208397-1|AAF20210.1| 805|Drosophila melanogaster Raw protein.
Length = 805
Score = 60.1 bits (139), Expect = 3e-09
Identities = 22/30 (73%), Positives = 29/30 (96%)
Frame = +3
Query: 510 GGSCNPTTWRSDIAIPMLKKMGITYFNPQV 599
GGSCNPTTWR+D+AIP LK++GI+++NPQV
Sbjct: 172 GGSCNPTTWRADVAIPALKELGISFYNPQV 201
Score = 31.9 bits (69), Expect = 0.84
Identities = 12/29 (41%), Positives = 19/29 (65%), Gaps = 1/29 (3%)
Frame = +3
Query: 510 GGSCN-PTTWRSDIAIPMLKKMGITYFNP 593
GGSC T WR ++A+P L+ G+++ P
Sbjct: 593 GGSCVLRTKWRQELAVPYLQSKGVSFHTP 621
>AF186024-1|AAF28462.1| 989|Drosophila melanogaster RAW protein.
Length = 989
Score = 60.1 bits (139), Expect = 3e-09
Identities = 22/30 (73%), Positives = 29/30 (96%)
Frame = +3
Query: 510 GGSCNPTTWRSDIAIPMLKKMGITYFNPQV 599
GGSCNPTTWR+D+AIP LK++GI+++NPQV
Sbjct: 356 GGSCNPTTWRADVAIPALKELGISFYNPQV 385
Score = 31.9 bits (69), Expect = 0.84
Identities = 12/29 (41%), Positives = 19/29 (65%), Gaps = 1/29 (3%)
Frame = +3
Query: 510 GGSCN-PTTWRSDIAIPMLKKMGITYFNP 593
GGSC T WR ++A+P L+ G+++ P
Sbjct: 777 GGSCVLRTKWRQELAVPYLQSKGVSFHTP 805
>AE014134-1558|AAF52706.2| 989|Drosophila melanogaster CG12437-PA,
isoform A protein.
Length = 989
Score = 60.1 bits (139), Expect = 3e-09
Identities = 22/30 (73%), Positives = 29/30 (96%)
Frame = +3
Query: 510 GGSCNPTTWRSDIAIPMLKKMGITYFNPQV 599
GGSCNPTTWR+D+AIP LK++GI+++NPQV
Sbjct: 356 GGSCNPTTWRADVAIPALKELGISFYNPQV 385
Score = 31.9 bits (69), Expect = 0.84
Identities = 12/29 (41%), Positives = 19/29 (65%), Gaps = 1/29 (3%)
Frame = +3
Query: 510 GGSCN-PTTWRSDIAIPMLKKMGITYFNP 593
GGSC T WR ++A+P L+ G+++ P
Sbjct: 777 GGSCVLRTKWRQELAVPYLQSKGVSFHTP 805
>AE014134-1557|AAF52705.2| 805|Drosophila melanogaster CG12437-PB,
isoform B protein.
Length = 805
Score = 60.1 bits (139), Expect = 3e-09
Identities = 22/30 (73%), Positives = 29/30 (96%)
Frame = +3
Query: 510 GGSCNPTTWRSDIAIPMLKKMGITYFNPQV 599
GGSCNPTTWR+D+AIP LK++GI+++NPQV
Sbjct: 172 GGSCNPTTWRADVAIPALKELGISFYNPQV 201
Score = 31.9 bits (69), Expect = 0.84
Identities = 12/29 (41%), Positives = 19/29 (65%), Gaps = 1/29 (3%)
Frame = +3
Query: 510 GGSCN-PTTWRSDIAIPMLKKMGITYFNP 593
GGSC T WR ++A+P L+ G+++ P
Sbjct: 593 GGSCVLRTKWRQELAVPYLQSKGVSFHTP 621
>DQ398892-1|ABD61608.1| 2043|Drosophila melanogaster Dicer-1
protein.
Length = 2043
Score = 28.7 bits (61), Expect = 7.9
Identities = 16/31 (51%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
Frame = +1
Query: 10 RPSAGGHRASQPRTAAR-YICRXAADHNDSS 99
+PS+G + A QPRT R Y R DHND S
Sbjct: 404 KPSSGANTA-QPRTRRRVYTRRHHRDHNDGS 433
>DQ398891-1|ABD61607.1| 2043|Drosophila melanogaster Dicer-1
protein.
Length = 2043
Score = 28.7 bits (61), Expect = 7.9
Identities = 16/31 (51%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
Frame = +1
Query: 10 RPSAGGHRASQPRTAAR-YICRXAADHNDSS 99
+PS+G + A QPRT R Y R DHND S
Sbjct: 404 KPSSGANTA-QPRTRRRVYTRRHHRDHNDGS 433
>DQ398889-1|ABD61605.1| 2043|Drosophila melanogaster Dicer-1
protein.
Length = 2043
Score = 28.7 bits (61), Expect = 7.9
Identities = 16/31 (51%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
Frame = +1
Query: 10 RPSAGGHRASQPRTAAR-YICRXAADHNDSS 99
+PS+G + A QPRT R Y R DHND S
Sbjct: 404 KPSSGANTA-QPRTRRRVYTRRHHRDHNDGS 433
>DQ398888-1|ABD61604.1| 2043|Drosophila melanogaster Dicer-1
protein.
Length = 2043
Score = 28.7 bits (61), Expect = 7.9
Identities = 16/31 (51%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
Frame = +1
Query: 10 RPSAGGHRASQPRTAAR-YICRXAADHNDSS 99
+PS+G + A QPRT R Y R DHND S
Sbjct: 404 KPSSGANTA-QPRTRRRVYTRRHHRDHNDGS 433
>DQ398887-1|ABD61603.1| 2043|Drosophila melanogaster Dicer-1
protein.
Length = 2043
Score = 28.7 bits (61), Expect = 7.9
Identities = 16/31 (51%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
Frame = +1
Query: 10 RPSAGGHRASQPRTAAR-YICRXAADHNDSS 99
+PS+G + A QPRT R Y R DHND S
Sbjct: 404 KPSSGANTA-QPRTRRRVYTRRHHRDHNDGS 433
>DQ398886-1|ABD61602.1| 2043|Drosophila melanogaster Dicer-1
protein.
Length = 2043
Score = 28.7 bits (61), Expect = 7.9
Identities = 16/31 (51%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
Frame = +1
Query: 10 RPSAGGHRASQPRTAAR-YICRXAADHNDSS 99
+PS+G + A QPRT R Y R DHND S
Sbjct: 404 KPSSGANTA-QPRTRRRVYTRRHHRDHNDGS 433
>DQ398885-1|ABD61601.1| 2043|Drosophila melanogaster Dicer-1
protein.
Length = 2043
Score = 28.7 bits (61), Expect = 7.9
Identities = 16/31 (51%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
Frame = +1
Query: 10 RPSAGGHRASQPRTAAR-YICRXAADHNDSS 99
+PS+G + A QPRT R Y R DHND S
Sbjct: 404 KPSSGANTA-QPRTRRRVYTRRHHRDHNDGS 433
>AE014297-3226|AAF56056.1| 2249|Drosophila melanogaster CG4792-PA
protein.
Length = 2249
Score = 28.7 bits (61), Expect = 7.9
Identities = 16/31 (51%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
Frame = +1
Query: 10 RPSAGGHRASQPRTAAR-YICRXAADHNDSS 99
+PS+G + A QPRT R Y R DHND S
Sbjct: 461 KPSSGANTA-QPRTRRRVYTRRHHRDHNDGS 490
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,694,216
Number of Sequences: 53049
Number of extensions: 632610
Number of successful extensions: 1625
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1551
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1625
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3005453946
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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