Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060975.seq
         (691 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z79596-4|CAB01856.2|  554|Caenorhabditis elegans Hypothetical pr...    50   2e-06
Z79596-3|CAI79132.1|  561|Caenorhabditis elegans Hypothetical pr...    50   2e-06
Z81523-6|CAB04244.1| 2586|Caenorhabditis elegans Hypothetical pr...    28   7.2  
Z67737-2|CAA91537.3|  400|Caenorhabditis elegans Hypothetical pr...    28   7.2  
U23514-6|AAC46544.2|  816|Caenorhabditis elegans Hypothetical pr...    28   7.2  
AF026213-9|AAB71302.2|  615|Caenorhabditis elegans Protein kinas...    28   7.2  

>Z79596-4|CAB01856.2|  554|Caenorhabditis elegans Hypothetical
           protein C02C6.2b protein.
          Length = 554

 Score = 49.6 bits (113), Expect = 2e-06
 Identities = 27/58 (46%), Positives = 32/58 (55%)
 Frame = +3

Query: 510 GGSCNPTTWRSDIAIPMLKKMGITYFNPQVGRLVHGS**RSSIALKTGGSSTFSFVLD 683
           GGSC  T WR    IP LKK GITY++PQ            SIA ++  SS F FV+D
Sbjct: 81  GGSCGTTVWRRQSVIPFLKKRGITYYDPQRSFWSENMIYEESIAKES--SSLFLFVID 136


>Z79596-3|CAI79132.1|  561|Caenorhabditis elegans Hypothetical
           protein C02C6.2a protein.
          Length = 561

 Score = 49.6 bits (113), Expect = 2e-06
 Identities = 27/58 (46%), Positives = 32/58 (55%)
 Frame = +3

Query: 510 GGSCNPTTWRSDIAIPMLKKMGITYFNPQVGRLVHGS**RSSIALKTGGSSTFSFVLD 683
           GGSC  T WR    IP LKK GITY++PQ            SIA ++  SS F FV+D
Sbjct: 88  GGSCGTTVWRRQSVIPFLKKRGITYYDPQRSFWSENMIYEESIAKES--SSLFLFVID 143


>Z81523-6|CAB04244.1| 2586|Caenorhabditis elegans Hypothetical
           protein F32H2.5 protein.
          Length = 2586

 Score = 27.9 bits (59), Expect = 7.2
 Identities = 21/58 (36%), Positives = 28/58 (48%)
 Frame = +3

Query: 24  WTSCFAATHGCTIHLQXCCRPQ**FPVRLKIIPANL*TNTIYPTFTR*KSILRSELQK 197
           W S  AAT     H+   C P   F   ++ IPAN  T  + P  +  ++ILR  LQK
Sbjct: 735 WESDLAATCSAEYHVHNACSPV-LFYEAIQKIPANAVTIEMAP-HSLMQAILRRSLQK 790


>Z67737-2|CAA91537.3|  400|Caenorhabditis elegans Hypothetical
           protein T01H10.2 protein.
          Length = 400

 Score = 27.9 bits (59), Expect = 7.2
 Identities = 13/41 (31%), Positives = 26/41 (63%)
 Frame = -1

Query: 643 SAMLDLYQLPWTNLPTCGLKYVIPIFFSIGIAMSDLQVVGL 521
           S  +++Y+ P+ +  TC +K+ +PIF S+ I + +   VG+
Sbjct: 171 SCPMNVYKFPF-DYQTCQIKFCLPIFNSVEIQIFNEIYVGV 210


>U23514-6|AAC46544.2|  816|Caenorhabditis elegans Hypothetical
           protein F48E8.4 protein.
          Length = 816

 Score = 27.9 bits (59), Expect = 7.2
 Identities = 14/49 (28%), Positives = 26/49 (53%)
 Frame = +2

Query: 545 HCYSDAKEDGNNVFQSASGKIGPRELIEVEHRA*NGRLEHFLFRFGQRD 691
           H  +DA E   N F +    +GP+ ++EV+ R  N ++E +   +  +D
Sbjct: 668 HATTDANE---NAFINLHKDLGPQLILEVKERIWNSKVEKYRTEYWTKD 713


>AF026213-9|AAB71302.2|  615|Caenorhabditis elegans Protein kinase
           protein 9, isoform b protein.
          Length = 615

 Score = 27.9 bits (59), Expect = 7.2
 Identities = 10/21 (47%), Positives = 12/21 (57%)
 Frame = -1

Query: 661 LEPPVLSAMLDLYQLPWTNLP 599
           +EPP+ S     YQ PW N P
Sbjct: 107 VEPPITSPPRSQYQAPWNNQP 127


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,442,366
Number of Sequences: 27780
Number of extensions: 313439
Number of successful extensions: 990
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 962
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 989
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1581836700
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)