Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060974.seq
         (450 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC062375-1|AAH62375.1|  228|Homo sapiens artemin protein.              29   5.5  
AL357079-13|CAI16797.1|  220|Homo sapiens artemin protein.             29   5.5  
AJ245628-1|CAB52396.1|  220|Homo sapiens pre-pro-enovin protein.       29   5.5  
AF120274-1|AAD21075.1|  220|Homo sapiens pre-pro-neublastin prot...    29   5.5  
AF115765-2|AAD13110.1|  237|Homo sapiens Artemin protein.              29   5.5  
AF115765-1|AAD13109.1|  220|Homo sapiens Artemin protein.              29   5.5  
AF109401-1|AAC98690.1|  220|Homo sapiens neurotrophic factor art...    29   5.5  

>BC062375-1|AAH62375.1|  228|Homo sapiens artemin protein.
          Length = 228

 Score = 29.5 bits (63), Expect = 5.5
 Identities = 16/36 (44%), Positives = 20/36 (55%), Gaps = 2/36 (5%)
 Frame = -2

Query: 281 RLCRRRGRSAPVRAXGT--QQDSLVRLDYHKQSCQR 180
           R CR R +  PVRA G   + D LVR  +   SC+R
Sbjct: 129 RGCRLRSQLVPVRALGLGHRSDELVRFRFCSGSCRR 164


>AL357079-13|CAI16797.1|  220|Homo sapiens artemin protein.
          Length = 220

 Score = 29.5 bits (63), Expect = 5.5
 Identities = 16/36 (44%), Positives = 20/36 (55%), Gaps = 2/36 (5%)
 Frame = -2

Query: 281 RLCRRRGRSAPVRAXGT--QQDSLVRLDYHKQSCQR 180
           R CR R +  PVRA G   + D LVR  +   SC+R
Sbjct: 121 RGCRLRSQLVPVRALGLGHRSDELVRFRFCSGSCRR 156


>AJ245628-1|CAB52396.1|  220|Homo sapiens pre-pro-enovin protein.
          Length = 220

 Score = 29.5 bits (63), Expect = 5.5
 Identities = 16/36 (44%), Positives = 20/36 (55%), Gaps = 2/36 (5%)
 Frame = -2

Query: 281 RLCRRRGRSAPVRAXGT--QQDSLVRLDYHKQSCQR 180
           R CR R +  PVRA G   + D LVR  +   SC+R
Sbjct: 121 RGCRLRSQLVPVRALGLGHRSDELVRFRFCSGSCRR 156


>AF120274-1|AAD21075.1|  220|Homo sapiens pre-pro-neublastin
           protein.
          Length = 220

 Score = 29.5 bits (63), Expect = 5.5
 Identities = 16/36 (44%), Positives = 20/36 (55%), Gaps = 2/36 (5%)
 Frame = -2

Query: 281 RLCRRRGRSAPVRAXGT--QQDSLVRLDYHKQSCQR 180
           R CR R +  PVRA G   + D LVR  +   SC+R
Sbjct: 121 RGCRLRSQLVPVRALGLGHRSDELVRFRFCSGSCRR 156


>AF115765-2|AAD13110.1|  237|Homo sapiens Artemin protein.
          Length = 237

 Score = 29.5 bits (63), Expect = 5.5
 Identities = 16/36 (44%), Positives = 20/36 (55%), Gaps = 2/36 (5%)
 Frame = -2

Query: 281 RLCRRRGRSAPVRAXGT--QQDSLVRLDYHKQSCQR 180
           R CR R +  PVRA G   + D LVR  +   SC+R
Sbjct: 138 RGCRLRSQLVPVRALGLGHRSDELVRFRFCSGSCRR 173


>AF115765-1|AAD13109.1|  220|Homo sapiens Artemin protein.
          Length = 220

 Score = 29.5 bits (63), Expect = 5.5
 Identities = 16/36 (44%), Positives = 20/36 (55%), Gaps = 2/36 (5%)
 Frame = -2

Query: 281 RLCRRRGRSAPVRAXGT--QQDSLVRLDYHKQSCQR 180
           R CR R +  PVRA G   + D LVR  +   SC+R
Sbjct: 121 RGCRLRSQLVPVRALGLGHRSDELVRFRFCSGSCRR 156


>AF109401-1|AAC98690.1|  220|Homo sapiens neurotrophic factor
           artemin precursor protein.
          Length = 220

 Score = 29.5 bits (63), Expect = 5.5
 Identities = 16/36 (44%), Positives = 20/36 (55%), Gaps = 2/36 (5%)
 Frame = -2

Query: 281 RLCRRRGRSAPVRAXGT--QQDSLVRLDYHKQSCQR 180
           R CR R +  PVRA G   + D LVR  +   SC+R
Sbjct: 121 RGCRLRSQLVPVRALGLGHRSDELVRFRFCSGSCRR 156


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 52,312,317
Number of Sequences: 237096
Number of extensions: 835607
Number of successful extensions: 1362
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1328
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1362
length of database: 76,859,062
effective HSP length: 84
effective length of database: 56,942,998
effective search space used: 3701294870
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)