Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060972.seq
         (684 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY943929-1|AAX49502.1|  755|Anopheles gambiae laccase-2 isoform ...    24   3.9  
AY943928-1|AAX49501.1|  753|Anopheles gambiae laccase-2 isoform ...    24   3.9  
DQ974169-1|ABJ52809.1|  508|Anopheles gambiae serpin 11 protein.       23   9.0  
AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubu...    23   9.0  

>AY943929-1|AAX49502.1|  755|Anopheles gambiae laccase-2 isoform B
           protein.
          Length = 755

 Score = 24.2 bits (50), Expect = 3.9
 Identities = 9/27 (33%), Positives = 16/27 (59%)
 Frame = -3

Query: 310 GQPPAVCHRHLFR*HWFDLVGAFFDPC 230
           G+PP +C+ H F   ++ ++GA    C
Sbjct: 158 GEPPRICYYH-FTVEYYTVLGAACQVC 183


>AY943928-1|AAX49501.1|  753|Anopheles gambiae laccase-2 isoform A
           protein.
          Length = 753

 Score = 24.2 bits (50), Expect = 3.9
 Identities = 9/27 (33%), Positives = 16/27 (59%)
 Frame = -3

Query: 310 GQPPAVCHRHLFR*HWFDLVGAFFDPC 230
           G+PP +C+ H F   ++ ++GA    C
Sbjct: 158 GEPPRICYYH-FTVEYYTVLGAACQVC 183


>DQ974169-1|ABJ52809.1|  508|Anopheles gambiae serpin 11 protein.
          Length = 508

 Score = 23.0 bits (47), Expect = 9.0
 Identities = 11/43 (25%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
 Frame = +2

Query: 155 SIK*QRIMVSTMATSSPDFLHDRMHTWIKECAHQ-VEPVLSEE 280
           S+K   + +S M  S+P    + ++ W +E   Q ++ V+ E+
Sbjct: 229 SLKSNHVPLSEMDFSNPRLASETINNWAREKTRQRIQEVVDEK 271


>AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubule
           binding protein protein.
          Length = 838

 Score = 23.0 bits (47), Expect = 9.0
 Identities = 10/30 (33%), Positives = 13/30 (43%)
 Frame = -2

Query: 509 RNRFPVMTRWCHSKRSGPARLPPVQQHAPP 420
           R   P   +  H + +GPA  P    H PP
Sbjct: 136 RPLLPQQQQHPHQRDTGPALFPAPISHRPP 165


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 648,682
Number of Sequences: 2352
Number of extensions: 11953
Number of successful extensions: 22
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 68995575
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)