Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060971.seq
         (682 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF990672-1|ABS30733.1|  466|Anopheles gambiae voltage-gated calc...    24   5.1  
DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative methopren...    23   6.7  
AY135184-1|AAN17505.1| 1009|Anopheles gambiae laccase 1 protein.       23   8.9  

>EF990672-1|ABS30733.1|  466|Anopheles gambiae voltage-gated calcium
           channel beta subunitprotein.
          Length = 466

 Score = 23.8 bits (49), Expect = 5.1
 Identities = 16/40 (40%), Positives = 19/40 (47%), Gaps = 2/40 (5%)
 Frame = +2

Query: 179 RASHYAVHPQPQLRRGLDPVXERPSPSKHAPNR--APLPT 292
           RA+H  V P P + R L    +  SPS   P R   P PT
Sbjct: 422 RATHPPVRPTPSVPRPLP--SQEASPSGEQPGRMGPPPPT 459


>DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative
           methoprene-tolerant protein protein.
          Length = 1115

 Score = 23.4 bits (48), Expect = 6.7
 Identities = 11/32 (34%), Positives = 14/32 (43%)
 Frame = +2

Query: 224 GLDPVXERPSPSKHAPNRAPLPTIYHHVMPCL 319
           G  P    P PS  +P   P PT+   + P L
Sbjct: 781 GSPPPPPPPPPSSLSPGGVPRPTVLQKLDPQL 812


>AY135184-1|AAN17505.1| 1009|Anopheles gambiae laccase 1 protein.
          Length = 1009

 Score = 23.0 bits (47), Expect = 8.9
 Identities = 10/24 (41%), Positives = 14/24 (58%)
 Frame = +2

Query: 173 LSRASHYAVHPQPQLRRGLDPVXE 244
           LS  S  ++ P  ++RR LDP  E
Sbjct: 53  LSNISEVSLEPGQRIRRELDPCCE 76


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 687,141
Number of Sequences: 2352
Number of extensions: 13835
Number of successful extensions: 35
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 35
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 35
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 68577420
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)