Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060971.seq
(682 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF010404-1|AAC51735.1| 4957|Homo sapiens ALR protein. 31 2.9
X83378-1|CAA58292.1| 869|Homo sapiens putative chloride channel... 30 6.6
D28475-1|BAA05836.4| 872|Homo sapiens KIAA0046 protein. 30 6.6
BC117424-1|AAI17425.1| 869|Homo sapiens chloride channel 6 prot... 30 6.6
BC117420-1|AAI17421.1| 869|Homo sapiens chloride channel 6 prot... 30 6.6
AL953897-20|CAI15895.1| 869|Homo sapiens chloride channel 6 pro... 30 6.6
AL953897-19|CAI15894.1| 953|Homo sapiens chloride channel 6 pro... 30 6.6
AL021155-11|CAI23406.1| 869|Homo sapiens chloride channel 6 pro... 30 6.6
AL021155-10|CAI23405.1| 953|Homo sapiens chloride channel 6 pro... 30 6.6
AF009257-1|AAB69287.1| 869|Homo sapiens putative chloride chann... 30 6.6
>AF010404-1|AAC51735.1| 4957|Homo sapiens ALR protein.
Length = 4957
Score = 31.5 bits (68), Expect = 2.9
Identities = 21/73 (28%), Positives = 34/73 (46%), Gaps = 3/73 (4%)
Frame = +1
Query: 244 APVPKQARTEPRTVTNYISPRDAMPSVVYSRESLH--PNSSSPVRSKR-SDANLMCEISH 414
+P P++ P+T ++SP P + E H P S P S R +++L E+
Sbjct: 218 SPQPEELHLSPQTEEPHLSPVPEEPCLSPQPEESHLSPQSEEPCLSPRPEESHLSPELEK 277
Query: 415 PRWDLGPRSDRSP 453
P L PR ++ P
Sbjct: 278 P--PLSPRPEKPP 288
>X83378-1|CAA58292.1| 869|Homo sapiens putative chloride channel
protein.
Length = 869
Score = 30.3 bits (65), Expect = 6.6
Identities = 16/43 (37%), Positives = 23/43 (53%)
Frame = +3
Query: 495 PFRLVDCVPYIGTSRYIFRYNTHHYSSPHNNYTKMGVRYLNVL 623
P +VD PY+ S + NT H S N + MG+R+L V+
Sbjct: 797 PRMIVDVTPYMNPSPFTVSPNT-HVSQVFNLFRTMGLRHLPVV 838
>D28475-1|BAA05836.4| 872|Homo sapiens KIAA0046 protein.
Length = 872
Score = 30.3 bits (65), Expect = 6.6
Identities = 16/43 (37%), Positives = 23/43 (53%)
Frame = +3
Query: 495 PFRLVDCVPYIGTSRYIFRYNTHHYSSPHNNYTKMGVRYLNVL 623
P +VD PY+ S + NT H S N + MG+R+L V+
Sbjct: 800 PRMIVDVTPYMNPSPFTVSPNT-HVSQVFNLFRTMGLRHLPVV 841
>BC117424-1|AAI17425.1| 869|Homo sapiens chloride channel 6
protein.
Length = 869
Score = 30.3 bits (65), Expect = 6.6
Identities = 16/43 (37%), Positives = 23/43 (53%)
Frame = +3
Query: 495 PFRLVDCVPYIGTSRYIFRYNTHHYSSPHNNYTKMGVRYLNVL 623
P +VD PY+ S + NT H S N + MG+R+L V+
Sbjct: 797 PRMIVDVTPYMNPSPFTVSPNT-HVSQVFNLFRTMGLRHLPVV 838
>BC117420-1|AAI17421.1| 869|Homo sapiens chloride channel 6
protein.
Length = 869
Score = 30.3 bits (65), Expect = 6.6
Identities = 16/43 (37%), Positives = 23/43 (53%)
Frame = +3
Query: 495 PFRLVDCVPYIGTSRYIFRYNTHHYSSPHNNYTKMGVRYLNVL 623
P +VD PY+ S + NT H S N + MG+R+L V+
Sbjct: 797 PRMIVDVTPYMNPSPFTVSPNT-HVSQVFNLFRTMGLRHLPVV 838
>AL953897-20|CAI15895.1| 869|Homo sapiens chloride channel 6
protein.
Length = 869
Score = 30.3 bits (65), Expect = 6.6
Identities = 16/43 (37%), Positives = 23/43 (53%)
Frame = +3
Query: 495 PFRLVDCVPYIGTSRYIFRYNTHHYSSPHNNYTKMGVRYLNVL 623
P +VD PY+ S + NT H S N + MG+R+L V+
Sbjct: 797 PRMIVDVTPYMNPSPFTVSPNT-HVSQVFNLFRTMGLRHLPVV 838
>AL953897-19|CAI15894.1| 953|Homo sapiens chloride channel 6
protein.
Length = 953
Score = 30.3 bits (65), Expect = 6.6
Identities = 16/43 (37%), Positives = 23/43 (53%)
Frame = +3
Query: 495 PFRLVDCVPYIGTSRYIFRYNTHHYSSPHNNYTKMGVRYLNVL 623
P +VD PY+ S + NT H S N + MG+R+L V+
Sbjct: 797 PRMIVDVTPYMNPSPFTVSPNT-HVSQVFNLFRTMGLRHLPVV 838
>AL021155-11|CAI23406.1| 869|Homo sapiens chloride channel 6
protein.
Length = 869
Score = 30.3 bits (65), Expect = 6.6
Identities = 16/43 (37%), Positives = 23/43 (53%)
Frame = +3
Query: 495 PFRLVDCVPYIGTSRYIFRYNTHHYSSPHNNYTKMGVRYLNVL 623
P +VD PY+ S + NT H S N + MG+R+L V+
Sbjct: 797 PRMIVDVTPYMNPSPFTVSPNT-HVSQVFNLFRTMGLRHLPVV 838
>AL021155-10|CAI23405.1| 953|Homo sapiens chloride channel 6
protein.
Length = 953
Score = 30.3 bits (65), Expect = 6.6
Identities = 16/43 (37%), Positives = 23/43 (53%)
Frame = +3
Query: 495 PFRLVDCVPYIGTSRYIFRYNTHHYSSPHNNYTKMGVRYLNVL 623
P +VD PY+ S + NT H S N + MG+R+L V+
Sbjct: 797 PRMIVDVTPYMNPSPFTVSPNT-HVSQVFNLFRTMGLRHLPVV 838
>AF009257-1|AAB69287.1| 869|Homo sapiens putative chloride channel
protein.
Length = 869
Score = 30.3 bits (65), Expect = 6.6
Identities = 16/43 (37%), Positives = 23/43 (53%)
Frame = +3
Query: 495 PFRLVDCVPYIGTSRYIFRYNTHHYSSPHNNYTKMGVRYLNVL 623
P +VD PY+ S + NT H S N + MG+R+L V+
Sbjct: 797 PRMIVDVTPYMNPSPFTVSPNT-HVSQVFNLFRTMGLRHLPVV 838
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 91,555,682
Number of Sequences: 237096
Number of extensions: 2043690
Number of successful extensions: 9288
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 8888
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9286
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7727256732
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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