Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060968.seq
         (685 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY056833-1|AAL23627.1| 1253|Anopheles gambiae chitin synthase pr...    24   3.9  
AB090821-1|BAC57917.1|  353|Anopheles gambiae gag-like protein p...    23   6.8  
AY545988-1|AAS99341.1|  423|Anopheles gambiae carboxypeptidase B...    23   9.0  
AJ627286-1|CAF28572.1|  423|Anopheles gambiae carboxypeptidase B...    23   9.0  

>AY056833-1|AAL23627.1| 1253|Anopheles gambiae chitin synthase
            protein.
          Length = 1253

 Score = 24.2 bits (50), Expect = 3.9
 Identities = 9/18 (50%), Positives = 13/18 (72%), Gaps = 1/18 (5%)
 Frame = +2

Query: 626  NVYEN-GDLWHIDSPPAR 676
            N Y++ GDLW+ D PP +
Sbjct: 1139 NPYDSAGDLWYPDEPPGQ 1156


>AB090821-1|BAC57917.1|  353|Anopheles gambiae gag-like protein
           protein.
          Length = 353

 Score = 23.4 bits (48), Expect = 6.8
 Identities = 15/59 (25%), Positives = 29/59 (49%)
 Frame = -2

Query: 225 IASILQHPQVRVTHFKRQPLNLC**FTLKSRRNNRPKAHDQLNNNEKAKHRSTKRNPKK 49
           +A +LQ  Q +    +RQP       T + ++  + + H Q +N  +A+ R   RN ++
Sbjct: 68  VAGMLQQQQQQ----QRQPQRQAVVGTQQQQQRRQQQQHQQRSNATQAQRREQLRNEQR 122


>AY545988-1|AAS99341.1|  423|Anopheles gambiae carboxypeptidase B
           precursor protein.
          Length = 423

 Score = 23.0 bits (47), Expect = 9.0
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = +3

Query: 612 KSGIQMYMKTETFGISILHP 671
           K+ I+MY+   T+G  IL P
Sbjct: 298 KAAIRMYLAVHTYGEMILWP 317


>AJ627286-1|CAF28572.1|  423|Anopheles gambiae carboxypeptidase B
           protein.
          Length = 423

 Score = 23.0 bits (47), Expect = 9.0
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = +3

Query: 612 KSGIQMYMKTETFGISILHP 671
           K+ I+MY+   T+G  IL P
Sbjct: 298 KAAIRMYLAVHTYGEMILWP 317


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 751,389
Number of Sequences: 2352
Number of extensions: 15582
Number of successful extensions: 23
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 68995575
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)