Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060968.seq
         (685 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X16709-1|CAA34681.1|  162|Apis mellifera phospholipase A-2 protein.    23   3.6  
EF373554-1|ABQ28728.1|  167|Apis mellifera phospholipase A2 prot...    23   3.6  
AF438408-1|AAL30844.1|  167|Apis mellifera phospholipase A2 prot...    23   3.6  
AF000632-1|AAC61894.1|  452|Apis mellifera major royal jelly pro...    23   3.6  
DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like recept...    22   6.3  
EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.          21   8.3  
DQ026032-1|AAY87891.1|  566|Apis mellifera nicotinic acetylcholi...    21   8.3  
AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.      21   8.3  

>X16709-1|CAA34681.1|  162|Apis mellifera phospholipase A-2 protein.
          Length = 162

 Score = 22.6 bits (46), Expect = 3.6
 Identities = 9/22 (40%), Positives = 12/22 (54%)
 Frame = -3

Query: 494 HSNRLSSPSNLTRKPSTGSSCR 429
           H N+ S P+ L R   T + CR
Sbjct: 39  HGNKSSGPNELGRFKHTDACCR 60


>EF373554-1|ABQ28728.1|  167|Apis mellifera phospholipase A2
           protein.
          Length = 167

 Score = 22.6 bits (46), Expect = 3.6
 Identities = 9/22 (40%), Positives = 12/22 (54%)
 Frame = -3

Query: 494 HSNRLSSPSNLTRKPSTGSSCR 429
           H N+ S P+ L R   T + CR
Sbjct: 44  HGNKSSGPNELGRFKHTDACCR 65


>AF438408-1|AAL30844.1|  167|Apis mellifera phospholipase A2
           protein.
          Length = 167

 Score = 22.6 bits (46), Expect = 3.6
 Identities = 9/22 (40%), Positives = 12/22 (54%)
 Frame = -3

Query: 494 HSNRLSSPSNLTRKPSTGSSCR 429
           H N+ S P+ L R   T + CR
Sbjct: 44  HGNKSSGPNELGRFKHTDACCR 65


>AF000632-1|AAC61894.1|  452|Apis mellifera major royal jelly
           protein MRJP2 protein.
          Length = 452

 Score = 22.6 bits (46), Expect = 3.6
 Identities = 7/17 (41%), Positives = 14/17 (82%)
 Frame = -2

Query: 138 SRRNNRPKAHDQLNNNE 88
           +++NN+  A++Q NNN+
Sbjct: 433 NQKNNKKNANNQKNNNQ 449


>DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like receptor
           2 protein.
          Length = 581

 Score = 21.8 bits (44), Expect = 6.3
 Identities = 10/19 (52%), Positives = 12/19 (63%)
 Frame = -3

Query: 89  RKRSTVQRNVIRRKSATCV 33
           R++S  QRNVIR   A  V
Sbjct: 274 RRKSAAQRNVIRMLVAVVV 292


>EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.
          Length = 683

 Score = 21.4 bits (43), Expect = 8.3
 Identities = 10/30 (33%), Positives = 15/30 (50%)
 Frame = -1

Query: 355 LFNLHYLAKQNYINISLWNSLRCPRIHQAF 266
           L + +++   NY    L NSL  P+I   F
Sbjct: 228 LNHFYFMLNHNYPPFMLSNSLNFPQIRGEF 257


>DQ026032-1|AAY87891.1|  566|Apis mellifera nicotinic acetylcholine
           receptor alpha3subunit protein.
          Length = 566

 Score = 21.4 bits (43), Expect = 8.3
 Identities = 7/16 (43%), Positives = 9/16 (56%)
 Frame = +3

Query: 552 THXIPPWTTRIHHHPL 599
           TH + PW  R+  H L
Sbjct: 334 THVMAPWVRRVFIHVL 349


>AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.
          Length = 683

 Score = 21.4 bits (43), Expect = 8.3
 Identities = 10/30 (33%), Positives = 15/30 (50%)
 Frame = -1

Query: 355 LFNLHYLAKQNYINISLWNSLRCPRIHQAF 266
           L + +++   NY    L NSL  P+I   F
Sbjct: 228 LNHFYFMLNHNYPPFMLSNSLNFPQIRGEF 257


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 200,694
Number of Sequences: 438
Number of extensions: 4616
Number of successful extensions: 15
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20830365
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)