Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060966.seq
(685 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q8MZI3 Cluster: GH10652p; n=2; Drosophila melanogaster|... 151 1e-35
UniRef50_P19109 Cluster: ATP-dependent RNA helicase p62; n=9; Eu... 149 6e-35
UniRef50_Q17JB5 Cluster: DEAD box ATP-dependent RNA helicase; n=... 143 4e-33
UniRef50_Q17KA8 Cluster: DEAD box ATP-dependent RNA helicase; n=... 135 8e-31
UniRef50_Q16XX4 Cluster: DEAD box ATP-dependent RNA helicase; n=... 132 8e-30
UniRef50_Q17II7 Cluster: DEAD box ATP-dependent RNA helicase; n=... 126 7e-28
UniRef50_Q5N7W4 Cluster: DEAD-box ATP-dependent RNA helicase 30;... 120 2e-26
UniRef50_Q9SWV9 Cluster: Ethylene-responsive RNA helicase; n=5; ... 119 8e-26
UniRef50_Q4IF76 Cluster: ATP-dependent RNA helicase DBP2; n=4; F... 118 1e-25
UniRef50_Q5CNJ7 Cluster: Similar to RNA-dependent helicase p68; ... 107 2e-22
UniRef50_Q24I45 Cluster: DEAD/DEAH box helicase family protein; ... 105 8e-22
UniRef50_Q4N215 Cluster: RNA helicase, putative; n=3; Aconoidasi... 105 1e-21
UniRef50_UPI00006CD03A Cluster: P68-like protein, putative; n=1;... 104 2e-21
UniRef50_Q8IL14 Cluster: Helicase, truncated, putative; n=3; Euk... 104 2e-21
UniRef50_Q4TEE5 Cluster: Chromosome undetermined SCAF5464, whole... 101 2e-20
UniRef50_Q5JKF2 Cluster: DEAD-box ATP-dependent RNA helicase 40;... 98 2e-19
UniRef50_A2EVI2 Cluster: DEAD/DEAH box helicase family protein; ... 98 2e-19
UniRef50_Q8SRB2 Cluster: ATP-dependent RNA helicase DBP2; n=103;... 98 2e-19
UniRef50_Q9LYJ9 Cluster: DEAD-box ATP-dependent RNA helicase 46;... 97 5e-19
UniRef50_Q9LKL6 Cluster: DEAD box protein P68; n=5; Viridiplanta... 96 8e-19
UniRef50_Q4QIQ9 Cluster: ATP-dependent DEAD/H RNA helicase, puta... 96 8e-19
UniRef50_Q5VQL1-2 Cluster: Isoform 2 of Q5VQL1 ; n=2; Magnolioph... 95 1e-18
UniRef50_Q9SQV1 Cluster: Probable DEAD-box ATP-dependent RNA hel... 95 1e-18
UniRef50_A7RY08 Cluster: Predicted protein; n=2; Eukaryota|Rep: ... 91 2e-17
UniRef50_Q9P7C7 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 91 2e-17
UniRef50_A4S3A0 Cluster: Predicted protein; n=2; Ostreococcus|Re... 89 7e-17
UniRef50_Q4IP34 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 89 9e-17
UniRef50_Q86XP3 Cluster: ATP-dependent RNA helicase DDX42; n=47;... 89 9e-17
UniRef50_UPI0000F1E5FF Cluster: PREDICTED: similar to Pl10, part... 89 1e-16
UniRef50_Q7K4L8 Cluster: LD33749p; n=1; Drosophila melanogaster|... 89 1e-16
UniRef50_O00571 Cluster: ATP-dependent RNA helicase DDX3X; n=74;... 88 2e-16
UniRef50_Q26696 Cluster: Putative DEAD-box RNA helicase HEL64; n... 88 2e-16
UniRef50_Q013X8 Cluster: DEAD/DEAH box RNA helicase; n=1; Ostreo... 87 5e-16
UniRef50_Q7QA96 Cluster: ENSANGP00000013118; n=5; Eumetazoa|Rep:... 86 7e-16
UniRef50_A0C015 Cluster: Chromosome undetermined scaffold_14, wh... 86 7e-16
UniRef50_Q6BML1 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 86 7e-16
UniRef50_UPI00004988F8 Cluster: DEAD/DEAH box helicase; n=1; Ent... 86 9e-16
UniRef50_Q9M2F9 Cluster: DEAD-box ATP-dependent RNA helicase 52;... 86 9e-16
UniRef50_Q8H0U8 Cluster: DEAD-box ATP-dependent RNA helicase 42;... 86 9e-16
UniRef50_A4S107 Cluster: Predicted protein; n=1; Ostreococcus lu... 85 1e-15
UniRef50_Q93382 Cluster: Putative uncharacterized protein; n=2; ... 85 2e-15
UniRef50_Q965K2 Cluster: Putative uncharacterized protein; n=2; ... 84 3e-15
UniRef50_A4S294 Cluster: Predicted protein; n=1; Ostreococcus lu... 84 4e-15
UniRef50_Q4MYL1 Cluster: ATP-dependent RNA helicase, putative; n... 83 6e-15
UniRef50_Q9BUQ8 Cluster: Probable ATP-dependent RNA helicase DDX... 83 6e-15
UniRef50_Q95QN2 Cluster: Putative uncharacterized protein; n=2; ... 83 8e-15
UniRef50_A6RW79 Cluster: Putative uncharacterized protein; n=1; ... 82 1e-14
UniRef50_Q9NXZ2 Cluster: Probable ATP-dependent RNA helicase DDX... 82 1e-14
UniRef50_UPI00006CDDA3 Cluster: CLN3 protein; n=1; Tetrahymena t... 82 1e-14
UniRef50_A0BDD2 Cluster: Chromosome undetermined scaffold_100, w... 82 1e-14
UniRef50_A2ED04 Cluster: DEAD/DEAH box helicase family protein; ... 81 2e-14
UniRef50_Q9SF41 Cluster: DEAD-box ATP-dependent RNA helicase 45;... 81 2e-14
UniRef50_A7P8T9 Cluster: Chromosome chr3 scaffold_8, whole genom... 81 3e-14
UniRef50_A5KB15 Cluster: ATP-dependent RNA helicase, putative; n... 81 3e-14
UniRef50_P24784 Cluster: ATP-dependent RNA helicase DBP1; n=103;... 81 3e-14
UniRef50_O22907 Cluster: DEAD-box ATP-dependent RNA helicase 24;... 80 4e-14
UniRef50_UPI00015609AE Cluster: PREDICTED: similar to DEAD (Asp-... 80 6e-14
UniRef50_Q9VXW2 Cluster: CG6227-PA; n=11; Coelomata|Rep: CG6227-... 80 6e-14
UniRef50_Q869K2 Cluster: Similar to Dictyostelium discoideum (Sl... 80 6e-14
UniRef50_Q4UBP8 Cluster: RNA helicase, putative; n=4; Eukaryota|... 80 6e-14
UniRef50_UPI00004994C0 Cluster: DEAD/DEAH box helicase; n=2; Ent... 79 8e-14
UniRef50_P93008 Cluster: DEAD-box ATP-dependent RNA helicase 21;... 79 1e-13
UniRef50_Q1DMX8 Cluster: Pre-mRNA-splicing ATP-dependent RNA hel... 77 1e-13
UniRef50_Q8I0W7 Cluster: Snrnp protein, putative; n=6; Plasmodiu... 79 1e-13
UniRef50_Q012E3 Cluster: DEAD-box protein abstrakt; n=1; Ostreoc... 78 2e-13
UniRef50_Q1AG34 Cluster: Ded1-like DEAD-box RNA helicase; n=1; C... 78 2e-13
UniRef50_UPI00006CF9CE Cluster: DEAD/DEAH box helicase family pr... 78 2e-13
UniRef50_A2DH37 Cluster: DEAD/DEAH box helicase family protein; ... 78 2e-13
UniRef50_Q4PFD9 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 78 2e-13
UniRef50_A5E058 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 78 2e-13
UniRef50_A5BHG9 Cluster: Putative uncharacterized protein; n=1; ... 77 3e-13
UniRef50_Q6BG49 Cluster: RNA helicase, putative; n=1; Paramecium... 77 4e-13
UniRef50_Q54CB8 Cluster: Putative uncharacterized protein; n=1; ... 77 4e-13
UniRef50_Q9VHP0 Cluster: ATP-dependent RNA helicase bel; n=4; Pr... 77 4e-13
UniRef50_UPI000065DC0B Cluster: Probable ATP-dependent RNA helic... 76 7e-13
UniRef50_A2WLP5 Cluster: Putative uncharacterized protein; n=3; ... 76 7e-13
UniRef50_Q66WQ1 Cluster: DEAD box DNA helicase; n=2; Plasmodium ... 76 7e-13
UniRef50_A5K071 Cluster: ATP-dependent RNA helicase, putative; n... 76 9e-13
UniRef50_Q5CP59 Cluster: DEAD box polypeptide, Y chromosome-rela... 75 1e-12
UniRef50_Q4JF01 Cluster: Vasa homlogue; n=2; Eukaryota|Rep: Vasa... 75 1e-12
UniRef50_A7AWZ5 Cluster: DEAD/DEAH box helicase and helicase con... 75 1e-12
UniRef50_UPI00004992E6 Cluster: DEAD/DEAH box helicase; n=3; Ent... 75 2e-12
UniRef50_Q4QJI9 Cluster: Nucleolar RNA helicase II, putative; n=... 75 2e-12
UniRef50_Q9XVZ6 Cluster: Putative uncharacterized protein; n=2; ... 75 2e-12
UniRef50_Q17BQ3 Cluster: Putative uncharacterized protein; n=1; ... 75 2e-12
UniRef50_Q9LUW5 Cluster: DEAD-box ATP-dependent RNA helicase 53;... 75 2e-12
UniRef50_A7HG33 Cluster: DEAD/DEAH box helicase domain protein; ... 74 3e-12
UniRef50_A5K9H3 Cluster: Pre-mRNA splicing factor RNA helicase P... 74 3e-12
UniRef50_Q9P9G7 Cluster: DEAD-box RNA helicase; n=3; Methanosarc... 74 3e-12
UniRef50_Q6BLU9 Cluster: Pre-mRNA-splicing ATP-dependent RNA hel... 74 3e-12
UniRef50_Q54T87 Cluster: Putative uncharacterized protein; n=1; ... 74 4e-12
UniRef50_A7TJK8 Cluster: Putative uncharacterized protein; n=1; ... 74 4e-12
UniRef50_Q3SF48 Cluster: DEAD/DEAH box helicase; n=6; cellular o... 73 5e-12
UniRef50_Q0RTL3 Cluster: Cold-shock DeaD box ATP-dependent RNA h... 73 5e-12
UniRef50_O97032 Cluster: DjVLGB; n=2; Dugesia|Rep: DjVLGB - Duge... 73 5e-12
UniRef50_Q0CX32 Cluster: DEAD-box protein 3; n=11; Pezizomycotin... 73 5e-12
UniRef50_P38712 Cluster: ATP-dependent rRNA helicase RRP3; n=6; ... 73 5e-12
UniRef50_P21372 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 73 5e-12
UniRef50_Q754U8 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 73 5e-12
UniRef50_Q54Y81 Cluster: Putative RNA helicase; n=2; Dictyosteli... 73 7e-12
UniRef50_A0CUL6 Cluster: Chromosome undetermined scaffold_28, wh... 73 7e-12
UniRef50_Q9Y7T7 Cluster: Pre-mRNA-splicing ATP-dependent RNA hel... 73 7e-12
UniRef50_Q65XX1 Cluster: Vasa-and belle-like helicase protein 1,... 73 9e-12
UniRef50_Q8I416 Cluster: ATP-dependent RNA helicase, putative; n... 72 1e-11
UniRef50_A0RUV7 Cluster: Superfamily II helicase; n=3; Thermopro... 72 1e-11
UniRef50_A5E6W6 Cluster: ATP-dependent rRNA helicase RRP3; n=4; ... 72 1e-11
UniRef50_A3AD37 Cluster: Putative uncharacterized protein; n=2; ... 72 2e-11
UniRef50_A4AFV6 Cluster: ATP-dependent RNA helicase; n=3; Actino... 71 2e-11
UniRef50_A3ZXX1 Cluster: ATP-dependent RNA helicase; n=2; Planct... 71 2e-11
UniRef50_Q9GNP1 Cluster: Vasa homolog; n=18; Eumetazoa|Rep: Vasa... 71 2e-11
UniRef50_O97031 Cluster: DjVLGA; n=1; Dugesia japonica|Rep: DjVL... 71 2e-11
UniRef50_Q5KME7 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 71 2e-11
UniRef50_Q6C024 Cluster: Pre-mRNA-splicing ATP-dependent RNA hel... 68 2e-11
UniRef50_UPI0000499D6F Cluster: DEAD/DEAH box helicase; n=1; Ent... 71 3e-11
UniRef50_Q0FAJ4 Cluster: Dead-box ATP-dependent RNA helicase; n=... 71 3e-11
UniRef50_Q4W7T8 Cluster: VASA RNA helicase; n=1; Artemia francis... 71 3e-11
UniRef50_Q4UA43 Cluster: DEAD-family helicase, putative; n=3; Pi... 71 3e-11
UniRef50_Q388E8 Cluster: ATP-dependent DEAD/H RNA helicase, puta... 71 3e-11
UniRef50_UPI0000E48294 Cluster: PREDICTED: similar to DEAD (Asp-... 71 3e-11
UniRef50_Q87HW1 Cluster: ATP-dependent RNA helicase, DEAD box fa... 71 3e-11
UniRef50_Q18W60 Cluster: DEAD/DEAH box helicase-like; n=2; Desul... 71 3e-11
UniRef50_Q5CWJ1 Cluster: Nucleolar protein GU2. eIF4A-1-family. ... 71 3e-11
UniRef50_Q4JG17 Cluster: Vasa-like protein; n=1; Litopenaeus van... 71 3e-11
UniRef50_Q4P7Y2 Cluster: Putative uncharacterized protein; n=1; ... 71 3e-11
UniRef50_Q5FS73 Cluster: ATP-dependent RNA helicase; n=2; Glucon... 70 5e-11
UniRef50_Q087U7 Cluster: DEAD/DEAH box helicase domain protein; ... 70 5e-11
UniRef50_A4EAF2 Cluster: Putative uncharacterized protein; n=1; ... 70 5e-11
UniRef50_A4RW46 Cluster: Predicted protein; n=2; Ostreococcus|Re... 70 5e-11
UniRef50_Q6MN50 Cluster: ATP-dependent RNA helicase; n=1; Bdello... 70 6e-11
UniRef50_A0Z0M4 Cluster: ATP-dependent RNA helicase; n=1; marine... 70 6e-11
UniRef50_Q0G0P8 Cluster: Superfamily II DNA and RNA helicase; n=... 69 8e-11
UniRef50_Q01PH0 Cluster: DEAD/DEAH box helicase domain protein; ... 69 8e-11
UniRef50_A7CSF3 Cluster: DEAD/DEAH box helicase domain protein; ... 69 8e-11
UniRef50_Q4Z5Q6 Cluster: ATP-dependent RNA helicase, putative; n... 69 8e-11
UniRef50_A4V6K8 Cluster: Putative RNA helicase protein; n=1; Dug... 69 8e-11
UniRef50_Q9C551 Cluster: DEAD-box ATP-dependent RNA helicase 5; ... 69 8e-11
UniRef50_Q5NN72 Cluster: DNA and RNA helicase; n=3; Sphingomonad... 69 1e-10
UniRef50_Q2BP56 Cluster: Putative ATP-dependent RNA helicase; n=... 69 1e-10
UniRef50_A5UZK3 Cluster: DEAD/DEAH box helicase domain protein; ... 69 1e-10
UniRef50_Q9FZ92 Cluster: Putative DEAD-box ATP-dependent RNA hel... 69 1e-10
UniRef50_Q81JK1 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 69 1e-10
UniRef50_Q62IF8 Cluster: ATP-dependent RNA helicase RhlE; n=59; ... 69 1e-10
UniRef50_Q1GJ43 Cluster: DEAD/DEAH box helicase-like protein; n=... 69 1e-10
UniRef50_Q0BUS0 Cluster: ATP-dependent RNA helicase; n=3; Rhodos... 69 1e-10
UniRef50_A7CUH7 Cluster: DEAD/DEAH box helicase domain protein; ... 69 1e-10
UniRef50_A6W6A7 Cluster: DEAD/DEAH box helicase domain protein; ... 69 1e-10
UniRef50_A6NSW7 Cluster: Putative uncharacterized protein; n=1; ... 69 1e-10
UniRef50_Q00T47 Cluster: Putative RNA helicase, DRH1; n=1; Ostre... 69 1e-10
UniRef50_Q16T16 Cluster: DEAD box ATP-dependent RNA helicase; n=... 69 1e-10
UniRef50_A7U5X1 Cluster: DEAD-box helicase 11; n=11; Plasmodium|... 69 1e-10
UniRef50_Q9LU46 Cluster: DEAD-box ATP-dependent RNA helicase 35;... 69 1e-10
UniRef50_Q6APU7 Cluster: Related to ATP-dependent RNA helicase; ... 68 2e-10
UniRef50_A7BCL2 Cluster: Putative uncharacterized protein; n=1; ... 68 2e-10
UniRef50_Q4QIG1 Cluster: ATP-dependent DEAD/H RNA helicase, puta... 68 2e-10
UniRef50_Q9PA24 Cluster: ATP-dependent RNA helicase rhlB; n=87; ... 68 2e-10
UniRef50_UPI00003937F7 Cluster: COG0513: Superfamily II DNA and ... 68 2e-10
UniRef50_UPI0000F3242A Cluster: Probable ATP-dependent RNA helic... 68 2e-10
UniRef50_Q8YXJ0 Cluster: ATP-dependent RNA helicase; n=11; Cyano... 68 2e-10
UniRef50_Q8G5U3 Cluster: Possible ATP-dependent RNA helicase; n=... 68 2e-10
UniRef50_A6DIU5 Cluster: Probable ATP dependent RNA helicase; n=... 68 2e-10
UniRef50_A6CFZ8 Cluster: ATP-dependent RNA helicase; n=1; Planct... 68 2e-10
UniRef50_Q9N5K1 Cluster: Putative uncharacterized protein; n=2; ... 68 2e-10
UniRef50_A7RGX3 Cluster: Predicted protein; n=3; Eukaryota|Rep: ... 68 2e-10
UniRef50_Q82T78 Cluster: RhlE; ATP-dependent RNA helicase RhlE; ... 67 3e-10
UniRef50_A6PQ62 Cluster: DEAD/DEAH box helicase domain protein; ... 67 3e-10
UniRef50_Q2H4C0 Cluster: Putative uncharacterized protein; n=1; ... 67 3e-10
UniRef50_A4RK80 Cluster: Pre-mRNA-splicing ATP-dependent RNA hel... 67 3e-10
UniRef50_Q1J0S9 Cluster: DEAD/DEAH box helicase-like protein; n=... 67 4e-10
UniRef50_A6GPV2 Cluster: Helicase; n=1; Limnobacter sp. MED105|R... 67 4e-10
UniRef50_Q6T442 Cluster: Hel61; n=4; Leishmania|Rep: Hel61 - Lei... 67 4e-10
UniRef50_A3FQ46 Cluster: U5 snRNP 100 kD protein, putative; n=2;... 67 4e-10
UniRef50_A0BDT5 Cluster: Chromosome undetermined scaffold_101, w... 67 4e-10
UniRef50_Q3EBD3 Cluster: DEAD-box ATP-dependent RNA helicase 41;... 67 4e-10
UniRef50_P42305 Cluster: ATP-dependent RNA helicase dbpA; n=9; F... 67 4e-10
UniRef50_Q44NG9 Cluster: Helicase, C-terminal:DEAD/DEAH box heli... 66 6e-10
UniRef50_A7HKQ8 Cluster: DEAD/DEAH box helicase domain protein; ... 66 6e-10
UniRef50_A6NQG8 Cluster: Putative uncharacterized protein; n=2; ... 66 6e-10
UniRef50_A6GSW1 Cluster: Putative ATP-dependent RNA helicase; n=... 66 6e-10
UniRef50_A1IIT4 Cluster: RNA helicase; n=1; Neobenedenia girella... 66 6e-10
UniRef50_A0D315 Cluster: Chromosome undetermined scaffold_36, wh... 66 6e-10
UniRef50_O26305 Cluster: ATP-dependent RNA helicase, eIF-4A fami... 66 6e-10
UniRef50_Q8YH70 Cluster: ATP-DEPENDENT RNA HELICASE RHLE; n=10; ... 66 8e-10
UniRef50_Q62J95 Cluster: ATP-dependent RNA helicase RhlE, putati... 66 8e-10
UniRef50_Q0HYG8 Cluster: DEAD/DEAH box helicase domain protein; ... 66 8e-10
UniRef50_A5G1U8 Cluster: DEAD/DEAH box helicase domain protein; ... 66 8e-10
UniRef50_Q0UN57 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 66 8e-10
UniRef50_P0A9P8 Cluster: Cold-shock DEAD box protein A; n=54; Ga... 66 8e-10
UniRef50_Q11039 Cluster: Cold-shock DEAD box protein A homolog; ... 66 8e-10
UniRef50_Q5KHB7 Cluster: ATP-dependent RNA helicase DBP3; n=2; F... 66 8e-10
UniRef50_Q0C4R1 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 66 1e-09
UniRef50_Q9GV12 Cluster: Vasa-related protein CnVAS2; n=14; Eume... 66 1e-09
UniRef50_Q4W7T7 Cluster: VASA RNA helicase; n=3; Daphniidae|Rep:... 66 1e-09
UniRef50_Q4UE18 Cluster: RNA helicase, putative; n=2; Theileria|... 66 1e-09
UniRef50_A7SE71 Cluster: Predicted protein; n=1; Nematostella ve... 66 1e-09
UniRef50_A7TRT2 Cluster: Putative uncharacterized protein; n=1; ... 66 1e-09
UniRef50_Q9V3C0 Cluster: ATP-dependent RNA helicase abstrakt; n=... 66 1e-09
UniRef50_Q480Z7 Cluster: ATP-dependent RNA helicase, DEAD box fa... 65 1e-09
UniRef50_Q185X0 Cluster: ATP-dependent RNA helicase; n=3; Clostr... 65 1e-09
UniRef50_Q6FML5 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 65 1e-09
UniRef50_Q5KNF8 Cluster: Pre-mRNA-splicing ATP-dependent RNA hel... 65 1e-09
UniRef50_Q89IS2 Cluster: Cold-shock dead-box protein A; n=28; Al... 65 2e-09
UniRef50_Q6A6U7 Cluster: ATP-dependent RNA helicase; n=3; Actino... 65 2e-09
UniRef50_Q5NML9 Cluster: DNA and RNA helicase; n=28; Alphaproteo... 65 2e-09
UniRef50_O54116 Cluster: Probable DEAD-box RNA helicase; n=10; S... 65 2e-09
UniRef50_Q26CN9 Cluster: ATP-dependent RNA helicase; n=1; Flavob... 65 2e-09
UniRef50_Q0AR94 Cluster: DEAD/DEAH box helicase domain protein; ... 65 2e-09
UniRef50_A6TUK6 Cluster: DEAD/DEAH box helicase domain protein; ... 65 2e-09
UniRef50_A2U4F0 Cluster: Putative ATP-dependent RNA helicase; n=... 65 2e-09
UniRef50_A1SQH8 Cluster: DEAD/DEAH box helicase domain protein p... 65 2e-09
UniRef50_Q4UBV5 Cluster: DEAD-box family (RNA) helicase, putativ... 65 2e-09
UniRef50_Q978T9 Cluster: ATP-dependent RNA helicase; n=3; Thermo... 65 2e-09
UniRef50_Q7A4G0 Cluster: Probable DEAD-box ATP-dependent RNA hel... 65 2e-09
UniRef50_Q0UHM7 Cluster: ATP-dependent RNA helicase DBP7; n=1; P... 65 2e-09
UniRef50_Q64VR8 Cluster: ATP-dependent RNA helicase DeaD; n=14; ... 64 2e-09
UniRef50_Q0AVQ9 Cluster: ATP-dependent RNA helicase; n=1; Syntro... 64 2e-09
UniRef50_A3PFY9 Cluster: DEAD/DEAH box helicase domain protein; ... 64 2e-09
UniRef50_P25888 Cluster: Putative ATP-dependent RNA helicase rhl... 64 2e-09
UniRef50_Q28T45 Cluster: DEAD/DEAH box helicase-like protein; n=... 64 3e-09
UniRef50_Q1MY97 Cluster: DEAD/DEAH box helicase-like protein; n=... 64 3e-09
UniRef50_A3EUK2 Cluster: Superfamily II DNA and RNA helicase; n=... 64 3e-09
UniRef50_A0KTC9 Cluster: DEAD/DEAH box helicase domain protein; ... 64 3e-09
UniRef50_Q0E3X4 Cluster: DEAD-box ATP-dependent RNA helicase 35A... 64 3e-09
UniRef50_Q8D7D0 Cluster: Superfamily II DNA and RNA helicase; n=... 64 4e-09
UniRef50_Q725W5 Cluster: ATP-dependent RNA helicase, DEAD/DEAH f... 64 4e-09
UniRef50_Q67NW1 Cluster: ATP-dependent RNA helicase; n=5; Firmic... 64 4e-09
UniRef50_Q08Q14 Cluster: HeliCase, c-terminal:dead/deah box heli... 64 4e-09
UniRef50_A3ZWP8 Cluster: ATP-dependent RNA helicase; n=1; Blasto... 64 4e-09
UniRef50_A0K1H7 Cluster: DEAD/DEAH box helicase domain protein; ... 64 4e-09
UniRef50_Q8L7S8 Cluster: DEAD-box ATP-dependent RNA helicase 3; ... 64 4e-09
UniRef50_Q6CCZ1 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 64 4e-09
UniRef50_A5DU73 Cluster: Pre-mRNA-splicing ATP-dependent RNA hel... 64 4e-09
UniRef50_Q8F0Q7 Cluster: ATP-dependent RNA helicase; n=4; Leptos... 63 5e-09
UniRef50_O07897 Cluster: Heat resistant RNA dependent ATPase; n=... 63 5e-09
UniRef50_A5FST0 Cluster: DEAD/DEAH box helicase domain protein; ... 63 5e-09
UniRef50_A3TJG3 Cluster: ATP-dependent RNA helicase; n=5; Actino... 63 5e-09
UniRef50_Q019E9 Cluster: ATP-dependent RNA helicase; n=2; Ostreo... 63 5e-09
UniRef50_Q7QTB0 Cluster: GLP_15_15676_17025; n=1; Giardia lambli... 63 5e-09
UniRef50_P09052 Cluster: ATP-dependent RNA helicase vasa; n=5; E... 63 5e-09
UniRef50_Q7S5R1 Cluster: ATP-dependent RNA helicase dbp-3; n=10;... 63 5e-09
UniRef50_UPI00015B4D1B Cluster: PREDICTED: similar to DEAD box A... 63 7e-09
UniRef50_Q3AFI3 Cluster: ATP-dependent RNA helicase, DEAD box fa... 63 7e-09
UniRef50_A1USG3 Cluster: DEAD/DEAH box helicase domain/helicase ... 63 7e-09
UniRef50_A0LLL9 Cluster: DEAD/DEAH box helicase domain protein; ... 63 7e-09
UniRef50_A7PDS5 Cluster: Chromosome chr11 scaffold_13, whole gen... 63 7e-09
UniRef50_Q3ZDP1 Cluster: Vasa-like protein; n=7; Neoptera|Rep: V... 63 7e-09
UniRef50_A0EA02 Cluster: Chromosome undetermined scaffold_85, wh... 63 7e-09
UniRef50_Q9NR30 Cluster: Nucleolar RNA helicase 2; n=51; Euteleo... 63 7e-09
UniRef50_Q4SWK6 Cluster: Chromosome 12 SCAF13614, whole genome s... 62 9e-09
UniRef50_Q9RKJ0 Cluster: ATP-dependent RNA helicase; n=2; Strept... 62 9e-09
UniRef50_Q6AMK6 Cluster: Probable ATP-dependent RNA helicase; n=... 62 9e-09
UniRef50_A7JLA3 Cluster: ATP-dependent RNA helicase; n=20; Franc... 62 9e-09
UniRef50_Q9GV13 Cluster: Vasa-related protein CnVAS1; n=3; Eumet... 62 9e-09
UniRef50_Q7QDB7 Cluster: ENSANGP00000017541; n=1; Anopheles gamb... 62 9e-09
UniRef50_Q384E1 Cluster: Mitochondrial DEAD box protein; n=5; Tr... 62 9e-09
UniRef50_A1XCP2 Cluster: Vasa-like protein; n=2; Coelomata|Rep: ... 62 9e-09
UniRef50_Q9PGP6 Cluster: ATP-dependent RNA helicase; n=10; cellu... 62 1e-08
UniRef50_O83749 Cluster: ATP-dependent RNA helicase; n=2; Trepon... 62 1e-08
UniRef50_Q2BMZ1 Cluster: ATP-dependent RNA helicase; n=1; Neptun... 62 1e-08
UniRef50_Q1QYG3 Cluster: DEAD/DEAH box helicase-like protein; n=... 62 1e-08
UniRef50_Q0S0C7 Cluster: ATP-dependent RNA helicase; n=5; Actino... 62 1e-08
UniRef50_Q0LVA0 Cluster: Helicase-like:DEAD/DEAH box helicase-li... 62 1e-08
UniRef50_A3WD13 Cluster: DNA and RNA helicase; n=2; Alphaproteob... 62 1e-08
UniRef50_Q54DV7 Cluster: Putative uncharacterized protein; n=1; ... 62 1e-08
UniRef50_Q6CZD9 Cluster: ATP-dependent RNA helicase rhlB; n=2; G... 62 1e-08
UniRef50_Q7MT81 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 62 2e-08
UniRef50_Q3AZR1 Cluster: DEAD/DEAH box helicase-like; n=2; Synec... 62 2e-08
UniRef50_Q1FMF9 Cluster: Helicase-like:DbpA, RNA-binding:DEAD/DE... 62 2e-08
UniRef50_Q0M1B5 Cluster: Helicase-like:DEAD/DEAH box helicase-li... 62 2e-08
UniRef50_A6VTY7 Cluster: DEAD/DEAH box helicase domain protein; ... 62 2e-08
UniRef50_A6H0L1 Cluster: Probable ATP-dependent RNA helicase, DE... 62 2e-08
UniRef50_A6DML6 Cluster: ATP-dependent RNA helicase; n=1; Lentis... 62 2e-08
UniRef50_Q5VRY0 Cluster: DEAD-box ATP-dependent RNA helicase 39;... 62 2e-08
UniRef50_P20447 Cluster: ATP-dependent RNA helicase DBP3; n=20; ... 62 2e-08
UniRef50_UPI00015B61D8 Cluster: PREDICTED: similar to vasa-like ... 61 2e-08
UniRef50_A2TP65 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 61 2e-08
UniRef50_Q234J0 Cluster: DEAD/DEAH box helicase family protein; ... 61 2e-08
UniRef50_A7SJ72 Cluster: Predicted protein; n=1; Nematostella ve... 61 2e-08
UniRef50_A1IIT5 Cluster: RNA helicase; n=1; Neobenedenia girella... 61 2e-08
UniRef50_Q4PDT1 Cluster: ATP-dependent RNA helicase DBP3; n=1; U... 61 2e-08
UniRef50_Q8D6Y8 Cluster: Superfamily II DNA and RNA helicase; n=... 61 3e-08
UniRef50_Q8A2K2 Cluster: ATP-dependent RNA helicase; n=10; cellu... 61 3e-08
UniRef50_Q5FNK0 Cluster: ATP-dependent RNA helicase; n=1; Glucon... 61 3e-08
UniRef50_Q3AX69 Cluster: DEAD/DEAH box helicase-like; n=15; Cyan... 61 3e-08
UniRef50_A2U1Q9 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 61 3e-08
UniRef50_Q58HG3 Cluster: DEAD-box RNA helicase; n=4; Eukaryota|R... 61 3e-08
UniRef50_Q2PZC2 Cluster: Vasa protein; n=3; Apidae|Rep: Vasa pro... 61 3e-08
UniRef50_Q8XKJ8 Cluster: ATP-dependent RNA helicase; n=12; Clost... 60 4e-08
UniRef50_Q89UH0 Cluster: Dead-box ATP-dependent RNA helicase; n=... 60 4e-08
UniRef50_Q1VL45 Cluster: DEAD/DEAH box helicase-like protein; n=... 60 4e-08
UniRef50_Q1N6E2 Cluster: ATP-dependent RNA helicase; n=1; Oceano... 60 4e-08
UniRef50_Q1I3W1 Cluster: ATP-dependent RNA helicase RhlE, DEAD b... 60 4e-08
UniRef50_A6T3R2 Cluster: ATP-dependent RNA helicase; n=52; cellu... 60 4e-08
UniRef50_A1KUM8 Cluster: Putative ATP-dependent RNA helicase; n=... 60 4e-08
UniRef50_A1G315 Cluster: DEAD/DEAH box helicase-like; n=2; Salin... 60 4e-08
UniRef50_A7QRK7 Cluster: Chromosome undetermined scaffold_151, w... 60 4e-08
UniRef50_A2E5C2 Cluster: DEAD/DEAH box helicase family protein; ... 60 4e-08
UniRef50_A4FZ46 Cluster: DEAD/DEAH box helicase domain protein; ... 60 4e-08
UniRef50_A6QC93 Cluster: ATP-independent RNA helicase DbpA; n=1;... 60 5e-08
UniRef50_A4C6L9 Cluster: ATP-dependent RNA helicase, DEAD box fa... 60 5e-08
UniRef50_A0VLH7 Cluster: DEAD/DEAH box helicase domain protein; ... 60 5e-08
UniRef50_Q86B47 Cluster: CG8611-PB, isoform B; n=2; Drosophila m... 60 5e-08
UniRef50_P75172 Cluster: Probable ATP-dependent RNA helicase MG4... 60 5e-08
UniRef50_Q7VFA9 Cluster: ATP-dependent RNA helicase DeaD; n=6; H... 60 7e-08
UniRef50_Q5QVE4 Cluster: ATP-dependent RNA helicase; n=2; Idioma... 60 7e-08
UniRef50_Q484Q1 Cluster: RNA helicase DeaD; n=1; Colwellia psych... 60 7e-08
UniRef50_Q0BSI7 Cluster: ATP-dependent RNA helicase; n=12; Alpha... 60 7e-08
UniRef50_A7HDE9 Cluster: DEAD/DEAH box helicase domain protein; ... 60 7e-08
UniRef50_A4LYS0 Cluster: DEAD/DEAH box helicase domain protein; ... 60 7e-08
UniRef50_A4S507 Cluster: Predicted protein; n=2; Ostreococcus|Re... 60 7e-08
UniRef50_Q7PMT7 Cluster: ENSANGP00000010668; n=1; Anopheles gamb... 60 7e-08
UniRef50_A7RHS2 Cluster: Predicted protein; n=1; Nematostella ve... 60 7e-08
UniRef50_Q5L3G9 Cluster: DEAD-box ATP-dependent RNA helicase ydb... 60 7e-08
UniRef50_Q8EJQ5 Cluster: ATP-dependent RNA helicase rhlB; n=62; ... 60 7e-08
UniRef50_Q56X76 Cluster: DEAD-box ATP-dependent RNA helicase 39;... 60 7e-08
UniRef50_Q6FM43 Cluster: Pre-mRNA-splicing ATP-dependent RNA hel... 60 7e-08
UniRef50_Q9H8H2 Cluster: Probable ATP-dependent RNA helicase DDX... 60 7e-08
UniRef50_Q4T821 Cluster: Chromosome undetermined SCAF7914, whole... 59 9e-08
UniRef50_Q6MHS8 Cluster: ATP-dependent RNA helicase; n=1; Bdello... 59 9e-08
UniRef50_Q11UI8 Cluster: DEAD box-related helicase; n=3; Sphingo... 59 9e-08
UniRef50_Q11U28 Cluster: ATP-dependent RNA helicase protein; n=4... 59 9e-08
UniRef50_A2DES1 Cluster: DEAD/DEAH box helicase family protein; ... 59 9e-08
UniRef50_Q88NB7 Cluster: ATP-dependent RNA helicase rhlB; n=18; ... 59 9e-08
UniRef50_Q39189 Cluster: DEAD-box ATP-dependent RNA helicase 7; ... 59 9e-08
UniRef50_A5DAR2 Cluster: ATP-dependent RNA helicase DBP7; n=2; P... 59 9e-08
UniRef50_A4QX49 Cluster: ATP-dependent RNA helicase DBP7; n=1; M... 59 9e-08
UniRef50_Q30YG9 Cluster: DEAD/DEAH box helicase-like; n=3; Delta... 59 1e-07
UniRef50_Q0S0C5 Cluster: Possible ATP-dependent RNA helicase; n=... 59 1e-07
UniRef50_A1U3D6 Cluster: DEAD/DEAH box helicase domain protein; ... 59 1e-07
UniRef50_P23394 Cluster: Pre-mRNA-splicing ATP-dependent RNA hel... 59 1e-07
UniRef50_P44586 Cluster: Cold-shock DEAD box protein A homolog; ... 59 1e-07
UniRef50_Q6MR64 Cluster: ATP-dependent RNA helicase; n=5; cellul... 58 2e-07
UniRef50_Q9S531 Cluster: DEAD-box protein; n=4; Cystobacterineae... 58 2e-07
UniRef50_A4C0F9 Cluster: ATP-dependent RNA helicase; n=6; Bacter... 58 2e-07
UniRef50_Q7R3F3 Cluster: GLP_158_79919_77949; n=1; Giardia lambl... 58 2e-07
UniRef50_A7AM30 Cluster: RNA helicase family protein; n=1; Babes... 58 2e-07
UniRef50_A0D232 Cluster: Chromosome undetermined scaffold_35, wh... 58 2e-07
UniRef50_A0C369 Cluster: Chromosome undetermined scaffold_146, w... 58 2e-07
UniRef50_Q0CF43 Cluster: ATP-dependent RNA helicase dbp7; n=10; ... 58 2e-07
UniRef50_UPI0000F1F65D Cluster: PREDICTED: hypothetical protein;... 58 2e-07
UniRef50_Q4PNH7 Cluster: Putative cold-shock dead-box protein A;... 58 2e-07
UniRef50_A0JYP4 Cluster: DEAD/DEAH box helicase domain protein; ... 58 2e-07
UniRef50_Q54CD8 Cluster: Putative RNA helicase; n=2; Dictyosteli... 58 2e-07
UniRef50_P90897 Cluster: Putative uncharacterized protein; n=2; ... 58 2e-07
UniRef50_A7U5X0 Cluster: DEAD-box helicase 10; n=2; Plasmodium f... 58 2e-07
UniRef50_A5KC62 Cluster: DEAD/DEAH box helicase, putative; n=10;... 58 2e-07
UniRef50_UPI00003C8469 Cluster: hypothetical protein Faci_030017... 58 3e-07
UniRef50_Q89M45 Cluster: ATP-dependent RNA helicase; n=29; cellu... 58 3e-07
UniRef50_Q5QWG1 Cluster: ATP-dependent RNA helicase; n=1; Idioma... 58 3e-07
UniRef50_A3JG19 Cluster: ATP-dependent RNA helicase; n=1; Marino... 58 3e-07
UniRef50_Q5BYH3 Cluster: SJCHGC05414 protein; n=1; Schistosoma j... 58 3e-07
UniRef50_Q4N7J8 Cluster: DEAD box RNA helicase, putative; n=2; T... 58 3e-07
UniRef50_Q9HXE5 Cluster: ATP-dependent RNA helicase rhlB; n=22; ... 58 3e-07
UniRef50_UPI0000498E70 Cluster: DEAD/DEAH box helicase; n=1; Ent... 57 3e-07
UniRef50_Q9KKW0 Cluster: ATP-dependent RNA helicase, DEAD box fa... 57 3e-07
UniRef50_Q4FSS4 Cluster: Possible ATP-dependent DEAD/DEAH box RN... 57 3e-07
UniRef50_A4BET4 Cluster: DEAD/DEAH box helicase-like protein; n=... 57 3e-07
UniRef50_A2DFG9 Cluster: DEAD/DEAH box helicase family protein; ... 57 3e-07
UniRef50_Q53FI9 Cluster: Nucleolar protein GU2 variant; n=3; Eut... 57 3e-07
UniRef50_Q6KZC2 Cluster: ATP-dependent RNA helicase; n=1; Picrop... 57 3e-07
UniRef50_Q7XJN0 Cluster: DEAD-box ATP-dependent RNA helicase 17;... 57 3e-07
UniRef50_Q9DF36 Cluster: RNA helicase II/Gu; n=9; Tetrapoda|Rep:... 57 5e-07
UniRef50_Q92GV2 Cluster: ATP-dependent RNA helicase RhlE; n=10; ... 57 5e-07
UniRef50_Q6MN90 Cluster: RNA helicase; n=1; Bdellovibrio bacteri... 57 5e-07
UniRef50_Q6MBR0 Cluster: Putative ATP-dependent RNA helicase; n=... 57 5e-07
UniRef50_Q5FUQ9 Cluster: ATP-dependent RNA helicase; n=11; cellu... 57 5e-07
UniRef50_Q12B10 Cluster: DEAD/DEAH box helicase-like; n=13; Prot... 57 5e-07
UniRef50_A0RP33 Cluster: Putative ATP-dependent RNA helicase Rhl... 57 5e-07
UniRef50_A2EPC6 Cluster: Type III restriction enzyme, res subuni... 57 5e-07
UniRef50_A2D7F9 Cluster: DEAD/DEAH box helicase family protein; ... 57 5e-07
UniRef50_A4RBW7 Cluster: Putative uncharacterized protein; n=4; ... 57 5e-07
UniRef50_Q2NEZ7 Cluster: Predicted helicase; n=6; cellular organ... 57 5e-07
UniRef50_A2SQE1 Cluster: DEAD/DEAH box helicase domain protein; ... 57 5e-07
UniRef50_Q4P3U9 Cluster: ATP-dependent rRNA helicase RRP3; n=20;... 57 5e-07
UniRef50_Q5KJI2 Cluster: ATP-dependent RNA helicase DHH1; n=4; D... 57 5e-07
UniRef50_Q92499 Cluster: ATP-dependent RNA helicase DDX1; n=56; ... 57 5e-07
UniRef50_Q88XN5 Cluster: ATP-dependent RNA helicase; n=2; Lactob... 56 6e-07
UniRef50_Q6MN67 Cluster: ATP-dependent RNA helicase; n=3; Deltap... 56 6e-07
UniRef50_Q6KI10 Cluster: DEAD-box ATP-dependent RNA helicase; n=... 56 6e-07
UniRef50_O66866 Cluster: ATP-dependent RNA helicase DeaD; n=1; A... 56 6e-07
UniRef50_Q12QV2 Cluster: DEAD/DEAH box helicase-like protein; n=... 56 6e-07
UniRef50_Q11TW3 Cluster: Possible ATP-dependent RNA helicase; n=... 56 6e-07
UniRef50_A4M6V6 Cluster: DEAD/DEAH box helicase domain protein; ... 56 6e-07
UniRef50_A1FEC3 Cluster: DEAD/DEAH box helicase-like; n=21; Gamm... 56 6e-07
UniRef50_Q015I7 Cluster: ATP-dependent RNA helicase; n=2; Ostreo... 56 6e-07
UniRef50_Q240I5 Cluster: DEAD/DEAH box helicase family protein; ... 56 6e-07
UniRef50_A6RSH5 Cluster: Putative uncharacterized protein; n=2; ... 56 6e-07
UniRef50_Q03532 Cluster: ATP-dependent RNA helicase HAS1; n=70; ... 56 6e-07
UniRef50_O60173 Cluster: ATP-dependent RNA helicase dbp7; n=1; S... 56 6e-07
UniRef50_Q7S873 Cluster: ATP-dependent RNA helicase dbp-7; n=2; ... 56 6e-07
UniRef50_UPI000155CE2F Cluster: PREDICTED: similar to R27090_2; ... 56 8e-07
UniRef50_UPI00006CB2CD Cluster: DEAD/DEAH box helicase family pr... 56 8e-07
UniRef50_Q5QY63 Cluster: ATP-dependent RNA helicase; n=3; Altero... 56 8e-07
UniRef50_Q2YZZ9 Cluster: Putative uncharacterized protein; n=1; ... 56 8e-07
UniRef50_Q11WD3 Cluster: Possible ATP-dependent RNA helicase; n=... 56 8e-07
UniRef50_A6TTG0 Cluster: DEAD/DEAH box helicase domain protein; ... 56 8e-07
UniRef50_A6DHU9 Cluster: DEAD/DEAH box helicase-like protein; n=... 56 8e-07
UniRef50_Q7RFI2 Cluster: Drosophila melanogaster BcDNA.GH02833; ... 56 8e-07
UniRef50_A7U5W8 Cluster: DEAD-box helicase 5; n=6; Plasmodium|Re... 56 8e-07
UniRef50_A2DB16 Cluster: DEAD/DEAH box helicase family protein; ... 56 8e-07
UniRef50_A0D361 Cluster: Chromosome undetermined scaffold_36, wh... 56 8e-07
UniRef50_Q966L9 Cluster: ATP-dependent RNA helicase glh-2; n=4; ... 56 8e-07
UniRef50_Q9KAA6 Cluster: ATP-dependent RNA helicase; n=5; Firmic... 56 1e-06
UniRef50_Q6MQY6 Cluster: ATP-dependent RNA helicase; n=1; Bdello... 56 1e-06
UniRef50_Q15T34 Cluster: DEAD/DEAH box helicase-like; n=1; Pseud... 56 1e-06
UniRef50_A6DK15 Cluster: ATP-dependent RNA helicase, specific fo... 56 1e-06
UniRef50_A4BHZ9 Cluster: ATP-dependent RNA helicase; n=1; Reinek... 56 1e-06
UniRef50_A4BBH5 Cluster: Probable ATP-dependent RNA helicase; n=... 56 1e-06
UniRef50_A0LD66 Cluster: DEAD/DEAH box helicase domain protein; ... 56 1e-06
UniRef50_A0KZD5 Cluster: DEAD/DEAH box helicase domain protein; ... 56 1e-06
UniRef50_Q61FS8 Cluster: Putative uncharacterized protein CBG115... 56 1e-06
UniRef50_Q54TJ4 Cluster: Putative uncharacterized protein; n=1; ... 56 1e-06
UniRef50_A7S2R2 Cluster: Predicted protein; n=5; Eumetazoa|Rep: ... 56 1e-06
UniRef50_Q5T1V6 Cluster: Probable ATP-dependent RNA helicase DDX... 56 1e-06
UniRef50_Q4HZ68 Cluster: ATP-dependent RNA helicase DBP7; n=1; G... 56 1e-06
UniRef50_Q10202 Cluster: ATP-dependent RNA helicase dbp3; n=1; S... 56 1e-06
UniRef50_UPI00015B5BD1 Cluster: PREDICTED: similar to RE48840p; ... 55 1e-06
UniRef50_UPI00015B5BA9 Cluster: PREDICTED: similar to RE48840p; ... 55 1e-06
UniRef50_UPI0000499A01 Cluster: DEAD/DEAH box helicase; n=1; Ent... 55 1e-06
UniRef50_Q7UNV7 Cluster: ATP-dependent RNA helicase; n=2; Planct... 55 1e-06
UniRef50_Q39MK8 Cluster: DEAD/DEAH box helicase; n=10; Proteobac... 55 1e-06
UniRef50_Q4IZ16 Cluster: DEAD/DEAH box helicase:Helicase, C-term... 55 1e-06
UniRef50_Q5ENJ0 Cluster: Chloroplast RNA helicase; n=1; Heteroca... 55 1e-06
UniRef50_A4S6M9 Cluster: Predicted protein; n=3; Ostreococcus|Re... 55 1e-06
UniRef50_Q7QUN8 Cluster: GLP_47_37459_39102; n=1; Giardia lambli... 55 1e-06
UniRef50_Q7QQ49 Cluster: GLP_139_12217_14094; n=1; Giardia lambl... 55 1e-06
UniRef50_A2D755 Cluster: DEAD/DEAH box helicase family protein; ... 55 1e-06
UniRef50_A4UCU0 Cluster: DEAD box polypeptide 47 isoform 1 varia... 55 1e-06
UniRef50_Q96XQ7 Cluster: 337aa long hypothetical ATP-dependent R... 55 1e-06
UniRef50_Q9NQI0 Cluster: Probable ATP-dependent RNA helicase DDX... 55 1e-06
UniRef50_Q9H0S4 Cluster: Probable ATP-dependent RNA helicase DDX... 55 1e-06
UniRef50_Q4RM08 Cluster: Chromosome 10 SCAF15019, whole genome s... 55 2e-06
UniRef50_Q31EF0 Cluster: ATP-dependent RNA helicase; n=1; Thiomi... 55 2e-06
UniRef50_Q2J919 Cluster: Helicase-like; n=3; Frankia|Rep: Helica... 55 2e-06
UniRef50_Q1IMK6 Cluster: DEAD/DEAH box helicase-like; n=1; Acido... 55 2e-06
UniRef50_Q11UP8 Cluster: ATP-dependent RNA helicase; n=1; Cytoph... 55 2e-06
UniRef50_A4RXR7 Cluster: Predicted protein; n=3; Ostreococcus|Re... 55 2e-06
UniRef50_Q54CD6 Cluster: Putative uncharacterized protein; n=1; ... 55 2e-06
UniRef50_A5K2E0 Cluster: DEAD/DEAH box ATP-dependent RNA helicas... 55 2e-06
UniRef50_A2EQ41 Cluster: DEAD/DEAH box helicase family protein; ... 55 2e-06
UniRef50_P36120 Cluster: ATP-dependent RNA helicase DBP7; n=5; S... 55 2e-06
UniRef50_Q5GRS8 Cluster: Superfamily II DNA/RNA helicase; n=4; W... 54 2e-06
UniRef50_Q30SZ2 Cluster: DEAD/DEAH box helicase-like; n=1; Thiom... 54 2e-06
UniRef50_A6VWX2 Cluster: DEAD/DEAH box helicase domain protein; ... 54 2e-06
UniRef50_A5CVQ6 Cluster: ATP-dependent RNA helicase DeaD; n=2; s... 54 2e-06
UniRef50_A1VA48 Cluster: DEAD/DEAH box helicase domain protein; ... 54 2e-06
UniRef50_A2YDR2 Cluster: Putative uncharacterized protein; n=2; ... 54 2e-06
UniRef50_Q4Q1N9 Cluster: DEAD box RNA helicase, putative; n=5; T... 54 2e-06
UniRef50_O49289 Cluster: Putative DEAD-box ATP-dependent RNA hel... 54 2e-06
UniRef50_Q5KPU1 Cluster: ATP-dependent RNA helicase DBP8; n=2; F... 54 2e-06
UniRef50_UPI0000DB72AE Cluster: PREDICTED: similar to CG9143-PA;... 54 3e-06
UniRef50_UPI0000DAE40A Cluster: hypothetical protein Rgryl_01000... 54 3e-06
UniRef50_UPI0000499ECF Cluster: DEAD/DEAH box helicase; n=1; Ent... 54 3e-06
UniRef50_Q803D3 Cluster: DEAD (Asp-Glu-Ala-Asp) box polypeptide ... 54 3e-06
UniRef50_Q9KLE2 Cluster: ATP-dependent RNA helicase DeaD; n=35; ... 54 3e-06
UniRef50_Q5NZY2 Cluster: ATP-dependent RNA helicase DeaD; n=18; ... 54 3e-06
UniRef50_Q31AC4 Cluster: DEAD/DEAH box helicase-like protein; n=... 54 3e-06
UniRef50_A6Q8Y9 Cluster: ATP-dependent RNA helicase, DEAD-box fa... 54 3e-06
UniRef50_Q2WF63 Cluster: Putative uncharacterized protein; n=4; ... 54 3e-06
UniRef50_Q81VG0 Cluster: DEAD-box ATP-dependent RNA helicase ydb... 54 3e-06
UniRef50_P21693 Cluster: ATP-independent RNA helicase dbpA; n=19... 54 3e-06
UniRef50_Q6BKH3 Cluster: ATP-dependent RNA helicase DBP7; n=2; S... 54 3e-06
UniRef50_Q6A841 Cluster: Putative ATP-dependent RNA helicase; n=... 54 4e-06
UniRef50_Q2LY23 Cluster: Superfamily II DNA and RNA helicases; n... 54 4e-06
UniRef50_O34750 Cluster: YfmL protein; n=5; Bacillus|Rep: YfmL p... 54 4e-06
UniRef50_Q2BGG8 Cluster: RNA helicase DbpA; n=1; Neptuniibacter ... 54 4e-06
UniRef50_Q11QF9 Cluster: Inducible ATP-independent RNA helicase;... 54 4e-06
UniRef50_A1WB42 Cluster: DEAD/DEAH box helicase domain protein; ... 54 4e-06
UniRef50_A1UCR5 Cluster: DEAD/DEAH box helicase domain protein; ... 54 4e-06
UniRef50_Q012T2 Cluster: DEAD-box protein abstrakt; n=3; Ostreoc... 54 4e-06
UniRef50_Q9GV07 Cluster: Vasa-related protein PlVAS1; n=1; Duges... 54 4e-06
UniRef50_Q5CR74 Cluster: Dbp7p, eIF4A-a-family RNA SFII helicase... 54 4e-06
UniRef50_Q22T03 Cluster: DEAD/DEAH box helicase family protein; ... 54 4e-06
UniRef50_Q0W8H7 Cluster: ATP-dependent RNA helicase; n=1; uncult... 54 4e-06
UniRef50_Q9Y6V7 Cluster: Probable ATP-dependent RNA helicase DDX... 54 4e-06
UniRef50_UPI0000D573C1 Cluster: PREDICTED: similar to CG8611-PA,... 53 6e-06
UniRef50_Q5ZT20 Cluster: ATP-dependent RNA helicase; n=4; Legion... 53 6e-06
UniRef50_Q2Z064 Cluster: Probable ATP-dependent RNA helicase; n=... 53 6e-06
UniRef50_Q0HKH0 Cluster: DEAD/DEAH box helicase domain protein; ... 53 6e-06
UniRef50_Q9AW79 Cluster: Putative RNA-dependent helicase; n=1; G... 53 6e-06
UniRef50_Q4D7K2 Cluster: ATP-dependent DEAD/H RNA helicase, puta... 53 6e-06
UniRef50_Q22MC1 Cluster: Type III restriction enzyme, res subuni... 53 6e-06
UniRef50_A4V6M8 Cluster: Nucleolar RNA helicase II/Gu protein; n... 53 6e-06
UniRef50_P96614 Cluster: DEAD-box ATP-dependent RNA helicase ydb... 53 6e-06
UniRef50_UPI0000E49031 Cluster: PREDICTED: similar to DEAD/DEXH ... 53 7e-06
UniRef50_Q9KNA4 Cluster: ATP-dependent RNA helicase, DEAD box fa... 53 7e-06
UniRef50_Q98RE0 Cluster: ATP-DEPENDENT RNA HELICASE; n=1; Mycopl... 53 7e-06
UniRef50_Q7VQL9 Cluster: Cold-shock DEAD-box protein A, inducibl... 53 7e-06
UniRef50_A6G2A2 Cluster: DEAD/DEAH box helicase-like protein; n=... 53 7e-06
UniRef50_A3WBM2 Cluster: Cold-shock dead-box protein A; n=1; Ery... 53 7e-06
UniRef50_A4RXX8 Cluster: Predicted protein; n=1; Ostreococcus lu... 53 7e-06
UniRef50_Q7QP86 Cluster: GLP_397_1016_18; n=1; Giardia lamblia A... 53 7e-06
UniRef50_Q6BFH3 Cluster: Nucleolar RNA helicase II, putative; n=... 53 7e-06
UniRef50_Q581A3 Cluster: ATP-dependent DEAD/H RNA helicase, puta... 53 7e-06
UniRef50_A2G6R5 Cluster: DEAD/DEAH box helicase family protein; ... 53 7e-06
UniRef50_A2E9Y0 Cluster: DEAD/DEAH box helicase family protein; ... 53 7e-06
UniRef50_A7ETZ1 Cluster: Putative uncharacterized protein; n=1; ... 53 7e-06
UniRef50_A4QQK0 Cluster: Putative uncharacterized protein; n=3; ... 53 7e-06
UniRef50_Q14240 Cluster: Eukaryotic initiation factor 4A-II; n=3... 53 7e-06
UniRef50_P38719 Cluster: ATP-dependent RNA helicase DBP8; n=14; ... 53 7e-06
UniRef50_UPI0000E87E35 Cluster: putative ATP-dependent RNA helic... 52 1e-05
>UniRef50_Q8MZI3 Cluster: GH10652p; n=2; Drosophila
melanogaster|Rep: GH10652p - Drosophila melanogaster
(Fruit fly)
Length = 818
Score = 151 bits (367), Expect = 1e-35
Identities = 69/85 (81%), Positives = 79/85 (92%)
Frame = +1
Query: 256 PPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVE 435
P + RGDGPIALVLAPTRELAQQIQQVA +FG ++VRNTC+FGGAPK +QARDLERGVE
Sbjct: 223 PRLERGDGPIALVLAPTRELAQQIQQVAIEFGSNTHVRNTCIFGGAPKGQQARDLERGVE 282
Query: 436 IVIATPGRLIDFLEKGTTNLQRCTF 510
IVIATPGRLIDFLE+GTT+L+RCT+
Sbjct: 283 IVIATPGRLIDFLERGTTSLKRCTY 307
Score = 78.6 bits (185), Expect = 1e-13
Identities = 37/50 (74%), Positives = 40/50 (80%)
Frame = +3
Query: 468 FLGKGHNQLTAVHILVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSA 617
FL +G L LVLDEADRMLDMGFEPQIRKI++QIRPDRQ LMWSA
Sbjct: 294 FLERGTTSLKRCTYLVLDEADRMLDMGFEPQIRKIMQQIRPDRQVLMWSA 343
Score = 76.2 bits (179), Expect = 7e-13
Identities = 32/59 (54%), Positives = 43/59 (72%)
Frame = +3
Query: 15 NHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGV 191
++E+T+ G +V P FEE FPDYV ++ G+ +PT IQAQGWPIAMSG++LVGV
Sbjct: 142 SNEITIKGDQVPTPSIEFEEGGFPDYVMNEIRKQGFAKPTAIQAQGWPIAMSGRDLVGV 200
Score = 44.4 bits (100), Expect = 0.003
Identities = 18/20 (90%), Positives = 20/20 (100%)
Frame = +2
Query: 194 QTGSGKTLAYILPAIVHINN 253
QTGSGKTLAY+LPA+VHINN
Sbjct: 202 QTGSGKTLAYVLPAVVHINN 221
>UniRef50_P19109 Cluster: ATP-dependent RNA helicase p62; n=9;
Eukaryota|Rep: ATP-dependent RNA helicase p62 -
Drosophila melanogaster (Fruit fly)
Length = 719
Score = 149 bits (361), Expect = 6e-35
Identities = 77/135 (57%), Positives = 90/135 (66%)
Frame = +1
Query: 259 PIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEI 438
P++RGDGPIALVLAPTRELAQQIQQVA +FG +SYVRNTCVFGGAPK Q RDL+RG EI
Sbjct: 348 PLQRGDGPIALVLAPTRELAQQIQQVATEFGSSSYVRNTCVFGGAPKGGQMRDLQRGCEI 407
Query: 439 VIATPGRLIDFLEKGTTNLQRCTF*FLMRLIVCWIWDLNHKSEKSLSKYAQTDRL*CGQL 618
VIATPGRLIDFL G+TNL+RCT+ L + K +S+ +
Sbjct: 408 VIATPGRLIDFLSAGSTNLKRCTYLVLDEADRMLDMGFEPQIRKIVSQIRPDRQTLMWSA 467
Query: 619 TWPKRSXETC*XLLG 663
TWPK + LG
Sbjct: 468 TWPKEVKQLAEDFLG 482
Score = 80.2 bits (189), Expect = 4e-14
Identities = 36/59 (61%), Positives = 43/59 (72%)
Frame = +3
Query: 21 EVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVLK 197
E+TV G +V NPIQ F E + PDYV + ++ GYK PT IQAQGWPIAMSG N VG+ K
Sbjct: 269 EITVRG-QVPNPIQDFSEVHLPDYVMKEIRRQGYKAPTAIQAQGWPIAMSGSNFVGIAK 326
Score = 42.3 bits (95), Expect = 0.011
Identities = 18/22 (81%), Positives = 20/22 (90%)
Frame = +2
Query: 194 QTGSGKTLAYILPAIVHINNHR 259
+TGSGKTL YILPAIVHINN +
Sbjct: 326 KTGSGKTLGYILPAIVHINNQQ 347
Score = 33.5 bits (73), Expect = 4.9
Identities = 14/20 (70%), Positives = 18/20 (90%)
Frame = +2
Query: 626 PKEVXKLAXDYLGDYIQIHI 685
PKEV +LA D+LG+YIQI+I
Sbjct: 470 PKEVKQLAEDFLGNYIQINI 489
>UniRef50_Q17JB5 Cluster: DEAD box ATP-dependent RNA helicase; n=4;
Eukaryota|Rep: DEAD box ATP-dependent RNA helicase -
Aedes aegypti (Yellowfever mosquito)
Length = 699
Score = 143 bits (346), Expect = 4e-33
Identities = 69/92 (75%), Positives = 74/92 (80%)
Frame = +1
Query: 235 HCAHKQPPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQAR 414
H H+ +RRGDGPIALVLAPTRELAQQIQQVA DFG NTCVFGGAPK Q R
Sbjct: 183 HITHQDQ--LRRGDGPIALVLAPTRELAQQIQQVATDFGQRINANNTCVFGGAPKGPQIR 240
Query: 415 DLERGVEIVIATPGRLIDFLEKGTTNLQRCTF 510
DLERG EIVIATPGRLIDFLE+G TNL+RCT+
Sbjct: 241 DLERGAEIVIATPGRLIDFLERGITNLRRCTY 272
Score = 110 bits (265), Expect = 3e-23
Identities = 78/213 (36%), Positives = 106/213 (49%), Gaps = 4/213 (1%)
Frame = +3
Query: 21 EVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVLKR 200
E+T+ G + P FE+ PDY+ + G+ +PT IQAQG PIA+SG+++VG+ +
Sbjct: 109 EITLKGRNIPRPSMEFEQGGLPDYILEEANKQGFSKPTAIQAQGMPIALSGRDMVGIAQT 168
Query: 201 VPAKRWPTSCQPLCT*TTTAYSER*WSDCFGLGAYQRVSTTNSASCCRFWTHILCS*HVC 380
K L T R + A R + + + + C
Sbjct: 169 GSGKTLAYIAPALVHITHQDQLRRGDGPIALVLAPTRELAQQIQQVATDFGQRINANNTC 228
Query: 381 VWWCS*KRASPGLGEGSRNSHCY----SR*IN*FLGKGHNQLTAVHILVLDEADRMLDMG 548
V+ + K P + + R + R I+ FL +G L LVLDEADRMLDMG
Sbjct: 229 VFGGAPK--GPQIRDLERGAEIVIATPGRLID-FLERGITNLRRCTYLVLDEADRMLDMG 285
Query: 549 FEPQIRKIIEQIRPDRQTLMWSAYLAQKKXRNL 647
FEPQIRKI+ QIRPDRQ LMWSA K+ RNL
Sbjct: 286 FEPQIRKIMGQIRPDRQVLMWSA-TWPKEVRNL 317
Score = 37.9 bits (84), Expect = 0.23
Identities = 16/20 (80%), Positives = 18/20 (90%)
Frame = +2
Query: 194 QTGSGKTLAYILPAIVHINN 253
QTGSGKTLAYI PA+VHI +
Sbjct: 167 QTGSGKTLAYIAPALVHITH 186
>UniRef50_Q17KA8 Cluster: DEAD box ATP-dependent RNA helicase; n=1;
Aedes aegypti|Rep: DEAD box ATP-dependent RNA helicase -
Aedes aegypti (Yellowfever mosquito)
Length = 718
Score = 135 bits (327), Expect = 8e-31
Identities = 71/125 (56%), Positives = 81/125 (64%)
Frame = +1
Query: 256 PPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVE 435
P + RGDGPIALVLAPTRELAQQIQQV DFG + NTC+FGGA K QA DL RGVE
Sbjct: 167 PRLLRGDGPIALVLAPTRELAQQIQQVCNDFGRRMSIMNTCIFGGASKHPQADDLRRGVE 226
Query: 436 IVIATPGRLIDFLEKGTTNLQRCTF*FLMRLIVCWIWDLNHKSEKSLSKYAQTDRL*CGQ 615
IVIATPGRLIDFLE GTTNL+R T+ L + K +S+ ++
Sbjct: 227 IVIATPGRLIDFLESGTTNLRRTTYLVLDEADRMLDMGFEPQIRKIISQIRPDRQVLMWS 286
Query: 616 LTWPK 630
TWPK
Sbjct: 287 ATWPK 291
Score = 110 bits (265), Expect = 3e-23
Identities = 75/203 (36%), Positives = 97/203 (47%), Gaps = 1/203 (0%)
Frame = +3
Query: 12 NNHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGV 191
+ +E+T+ G V PI F E+ FP + G++EPT IQA GW IAMSG+++VG+
Sbjct: 85 DKNEITMIGKNVPAPIMQFGESGFPSVFLDEMGRQGFQEPTSIQAVGWSIAMSGRDMVGI 144
Query: 192 LKRVPAKRWPTSCQPLCT*TTTAYSER*WSDCFGLGAYQRVSTTNSASCCRFWTHILCS* 371
K K L + R + A R C + +
Sbjct: 145 AKTGSGKTLAYILPALIHISNQPRLLRGDGPIALVLAPTRELAQQIQQVCNDFGRRMSIM 204
Query: 372 HVCVWWCS*KR-ASPGLGEGSRNSHCYSR*IN*FLGKGHNQLTAVHILVLDEADRMLDMG 548
+ C++ + K + L G + FL G L LVLDEADRMLDMG
Sbjct: 205 NTCIFGGASKHPQADDLRRGVEIVIATPGRLIDFLESGTTNLRRTTYLVLDEADRMLDMG 264
Query: 549 FEPQIRKIIEQIRPDRQTLMWSA 617
FEPQIRKII QIRPDRQ LMWSA
Sbjct: 265 FEPQIRKIISQIRPDRQVLMWSA 287
Score = 40.3 bits (90), Expect = 0.043
Identities = 16/20 (80%), Positives = 20/20 (100%)
Frame = +2
Query: 194 QTGSGKTLAYILPAIVHINN 253
+TGSGKTLAYILPA++HI+N
Sbjct: 146 KTGSGKTLAYILPALIHISN 165
>UniRef50_Q16XX4 Cluster: DEAD box ATP-dependent RNA helicase; n=5;
Neoptera|Rep: DEAD box ATP-dependent RNA helicase -
Aedes aegypti (Yellowfever mosquito)
Length = 911
Score = 132 bits (319), Expect = 8e-30
Identities = 64/94 (68%), Positives = 76/94 (80%), Gaps = 2/94 (2%)
Frame = +1
Query: 235 HCAHKQPPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTS--YVRNTCVFGGAPKREQ 408
H AH++P ++RG+GP+ LVLAPTRELAQQIQ V DFG S +R TC+FGGA K Q
Sbjct: 290 HIAHQKP--LQRGEGPVVLVLAPTRELAQQIQTVVRDFGTHSKPLIRYTCIFGGALKGPQ 347
Query: 409 ARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTF 510
RDLERGVE+VIATPGRLIDFLE+G TNL+RCT+
Sbjct: 348 VRDLERGVEVVIATPGRLIDFLERGITNLRRCTY 381
Score = 80.6 bits (190), Expect = 3e-14
Identities = 39/50 (78%), Positives = 40/50 (80%)
Frame = +3
Query: 468 FLGKGHNQLTAVHILVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSA 617
FL +G L LVLDEADRMLDMGFEPQIRKIIEQIRPDRQ LMWSA
Sbjct: 368 FLERGITNLRRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQVLMWSA 417
Score = 76.6 bits (180), Expect = 5e-13
Identities = 32/57 (56%), Positives = 42/57 (73%)
Frame = +3
Query: 21 EVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGV 191
++TV G V +P Q FEE NFPD+V + MG+ PT IQAQGWPIA+SG++LVG+
Sbjct: 216 QITVMGNSVPHPSQDFEEGNFPDFVMNEINKMGFPNPTAIQAQGWPIALSGRDLVGI 272
Score = 37.9 bits (84), Expect = 0.23
Identities = 16/22 (72%), Positives = 19/22 (86%)
Frame = +2
Query: 194 QTGSGKTLAYILPAIVHINNHR 259
QTGSGKTLAY+LP IVHI + +
Sbjct: 274 QTGSGKTLAYMLPGIVHIAHQK 295
>UniRef50_Q17II7 Cluster: DEAD box ATP-dependent RNA helicase; n=1;
Aedes aegypti|Rep: DEAD box ATP-dependent RNA helicase -
Aedes aegypti (Yellowfever mosquito)
Length = 639
Score = 126 bits (303), Expect = 7e-28
Identities = 58/87 (66%), Positives = 69/87 (79%)
Frame = +1
Query: 250 QPPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERG 429
Q +RRGDGPIAL+LAPTRELAQQI+QV DFG ++NTC+FGG KR+Q DL+ G
Sbjct: 151 QQSRLRRGDGPIALILAPTRELAQQIKQVTDDFGRAMKIKNTCLFGGGAKRQQGDDLKYG 210
Query: 430 VEIVIATPGRLIDFLEKGTTNLQRCTF 510
VEIVIATPGRLIDFL TNL+RC++
Sbjct: 211 VEIVIATPGRLIDFLSSEHTNLRRCSY 237
Score = 79.8 bits (188), Expect = 6e-14
Identities = 38/50 (76%), Positives = 38/50 (76%)
Frame = +3
Query: 468 FLGKGHNQLTAVHILVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSA 617
FL H L LVLDEADRMLDMGFEPQIR IIEQIRPD QTLMWSA
Sbjct: 224 FLSSEHTNLRRCSYLVLDEADRMLDMGFEPQIRAIIEQIRPDHQTLMWSA 273
Score = 62.9 bits (146), Expect = 7e-09
Identities = 27/59 (45%), Positives = 38/59 (64%)
Frame = +3
Query: 21 EVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVLK 197
E+T G +V +P FEE FP + + + PTPIQ+QGWPIAMSG+++VG+ K
Sbjct: 74 EITTKGRDVPDPALTFEEVGFPAEIADEWRYAEFTTPTPIQSQGWPIAMSGRDMVGIAK 132
Score = 35.1 bits (77), Expect = 1.6
Identities = 13/19 (68%), Positives = 19/19 (100%)
Frame = +2
Query: 194 QTGSGKTLAYILPAIVHIN 250
+TGSGKTL+Y+LPA++HI+
Sbjct: 132 KTGSGKTLSYLLPALMHID 150
>UniRef50_Q5N7W4 Cluster: DEAD-box ATP-dependent RNA helicase 30;
n=11; Eukaryota|Rep: DEAD-box ATP-dependent RNA helicase
30 - Oryza sativa subsp. japonica (Rice)
Length = 666
Score = 120 bits (290), Expect = 2e-26
Identities = 57/85 (67%), Positives = 66/85 (77%)
Frame = +1
Query: 256 PPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVE 435
P + +GDGPI L+LAPTRELA QIQQ + FG S R+TC++GGAPK Q RDL RGVE
Sbjct: 317 PRLEQGDGPIVLILAPTRELAVQIQQESGKFGSYSRTRSTCIYGGAPKGPQIRDLRRGVE 376
Query: 436 IVIATPGRLIDFLEKGTTNLQRCTF 510
IVIATPGRLID LE G TNL+R T+
Sbjct: 377 IVIATPGRLIDMLEGGHTNLRRVTY 401
Score = 81.4 bits (192), Expect = 2e-14
Identities = 29/57 (50%), Positives = 45/57 (78%)
Frame = +3
Query: 21 EVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGV 191
++TV G +V P++YF+EANFPDY Q + G+ EPTPIQ+QGWP+A+ G++++G+
Sbjct: 238 DITVEGHDVPKPVRYFQEANFPDYCMQAIAKSGFVEPTPIQSQGWPMALKGRDMIGI 294
Score = 79.8 bits (188), Expect = 6e-14
Identities = 37/46 (80%), Positives = 38/46 (82%)
Frame = +3
Query: 480 GHNQLTAVHILVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSA 617
GH L V LVLDEADRMLDMGFEPQIRKI+ QIRPDRQTL WSA
Sbjct: 392 GHTNLRRVTYLVLDEADRMLDMGFEPQIRKIVAQIRPDRQTLYWSA 437
Score = 35.5 bits (78), Expect = 1.2
Identities = 13/18 (72%), Positives = 17/18 (94%)
Frame = +2
Query: 194 QTGSGKTLAYILPAIVHI 247
QTGSGKTL+Y+LP +VH+
Sbjct: 296 QTGSGKTLSYLLPGLVHV 313
>UniRef50_Q9SWV9 Cluster: Ethylene-responsive RNA helicase; n=5;
Eukaryota|Rep: Ethylene-responsive RNA helicase -
Solanum lycopersicum (Tomato) (Lycopersicon esculentum)
Length = 474
Score = 119 bits (286), Expect = 8e-26
Identities = 56/84 (66%), Positives = 65/84 (77%)
Frame = +1
Query: 256 PPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVE 435
P + GDGPI LVLAPTRELA QIQQ A FG +S ++NTC++GG PK Q RDL++GVE
Sbjct: 162 PILDHGDGPIVLVLAPTRELAVQIQQEATKFGASSRIKNTCIYGGVPKGPQVRDLQKGVE 221
Query: 436 IVIATPGRLIDFLEKGTTNLQRCT 507
IVIATPGRLID LE TNL+R T
Sbjct: 222 IVIATPGRLIDMLESNHTNLRRVT 245
Score = 76.6 bits (180), Expect = 5e-13
Identities = 29/57 (50%), Positives = 43/57 (75%)
Frame = +3
Query: 21 EVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGV 191
E+T+ G +V PI+ F + FPDYV Q ++ G+ EPTPIQAQGWP+A+ G++L+G+
Sbjct: 83 EITIEGRDVPKPIKSFHDVGFPDYVLQEIEKAGFTEPTPIQAQGWPMALKGRDLIGI 139
Score = 62.5 bits (145), Expect = 9e-09
Identities = 34/49 (69%), Positives = 34/49 (69%)
Frame = +3
Query: 471 LGKGHNQLTAVHILVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSA 617
L H L V I VLDEADRMLDMGFEPQIRK I PDRQTL WSA
Sbjct: 234 LESNHTNLRRVTI-VLDEADRMLDMGFEPQIRKCISD-TPDRQTLYWSA 280
Score = 39.5 bits (88), Expect = 0.075
Identities = 15/19 (78%), Positives = 19/19 (100%)
Frame = +2
Query: 194 QTGSGKTLAYILPAIVHIN 250
+TGSGKT+AY+LPAIVH+N
Sbjct: 141 ETGSGKTIAYLLPAIVHVN 159
>UniRef50_Q4IF76 Cluster: ATP-dependent RNA helicase DBP2; n=4;
Fungi/Metazoa group|Rep: ATP-dependent RNA helicase DBP2
- Gibberella zeae (Fusarium graminearum)
Length = 555
Score = 118 bits (285), Expect = 1e-25
Identities = 56/85 (65%), Positives = 64/85 (75%)
Frame = +1
Query: 256 PPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVE 435
P + GDGPI LVLAPTRELA QIQ+ FG +S +RNTCV+GG PK Q RDL RGVE
Sbjct: 200 PLLAPGDGPIVLVLAPTRELAVQIQEEMKKFGRSSRIRNTCVYGGVPKGPQIRDLSRGVE 259
Query: 436 IVIATPGRLIDFLEKGTTNLQRCTF 510
+ IATPGRLID LE G TNL+R T+
Sbjct: 260 VCIATPGRLIDMLEAGKTNLRRVTY 284
Score = 79.0 bits (186), Expect = 1e-13
Identities = 39/49 (79%), Positives = 39/49 (79%)
Frame = +3
Query: 471 LGKGHNQLTAVHILVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSA 617
L G L V LVLDEADRMLDMGFEPQIRKII QIRPDRQTLMWSA
Sbjct: 272 LEAGKTNLRRVTYLVLDEADRMLDMGFEPQIRKIIGQIRPDRQTLMWSA 320
Score = 74.9 bits (176), Expect = 2e-12
Identities = 32/73 (43%), Positives = 48/73 (65%)
Frame = +3
Query: 18 HEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVLK 197
H++T++G V P++ F+EA FP YV VK G+ PT IQ+QGWP+A+SG+++VG+ +
Sbjct: 120 HQMTIAGSNVPKPVETFDEAGFPRYVMDEVKAQGFPAPTAIQSQGWPMALSGRDVVGIAE 179
Query: 198 RVPAKRWPTSCQP 236
K T C P
Sbjct: 180 TGSGKTL-TYCLP 191
Score = 36.7 bits (81), Expect = 0.53
Identities = 15/19 (78%), Positives = 17/19 (89%)
Frame = +2
Query: 194 QTGSGKTLAYILPAIVHIN 250
+TGSGKTL Y LP+IVHIN
Sbjct: 179 ETGSGKTLTYCLPSIVHIN 197
>UniRef50_Q5CNJ7 Cluster: Similar to RNA-dependent helicase p68;
n=2; Cryptosporidium|Rep: Similar to RNA-dependent
helicase p68 - Cryptosporidium hominis
Length = 406
Score = 107 bits (258), Expect = 2e-22
Identities = 60/144 (41%), Positives = 78/144 (54%)
Frame = +1
Query: 199 GFRQNVGLHLASHCAHKQPPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNTC 378
G + +G L + + P +R GDGPI LVLAPTREL +QI++ A FG +RNT
Sbjct: 35 GSGKTLGFLLPAMIHIRAQPLLRYGDGPICLVLAPTRELVEQIREQANQFGSIFKLRNTA 94
Query: 379 VFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTF*FLMRLIVCWIWDLNH 558
++GG PKR Q + GVEI IA PGRLID LE+G TNL R T+ L
Sbjct: 95 IYGGVPKRPQQASIRNGVEICIACPGRLIDLLEEGYTNLSRVTYLVLDEADRMLDMGFEP 154
Query: 559 KSEKSLSKYAQTDRL*CGQLTWPK 630
+ K +S+ + TWPK
Sbjct: 155 QIRKLVSQIRPDRQTLLWSATWPK 178
Score = 39.1 bits (87), Expect = 0.099
Identities = 13/22 (59%), Positives = 19/22 (86%)
Frame = +3
Query: 126 EPTPIQAQGWPIAMSGKNLVGV 191
EPT IQ QGWP+A+SG +++G+
Sbjct: 10 EPTAIQVQGWPVALSGHDMIGI 31
Score = 33.5 bits (73), Expect = 4.9
Identities = 12/18 (66%), Positives = 17/18 (94%)
Frame = +2
Query: 194 QTGSGKTLAYILPAIVHI 247
+TGSGKTL ++LPA++HI
Sbjct: 33 ETGSGKTLGFLLPAMIHI 50
>UniRef50_Q24I45 Cluster: DEAD/DEAH box helicase family protein;
n=2; Tetrahymena thermophila|Rep: DEAD/DEAH box helicase
family protein - Tetrahymena thermophila SB210
Length = 713
Score = 105 bits (253), Expect = 8e-22
Identities = 48/85 (56%), Positives = 65/85 (76%)
Frame = +1
Query: 256 PPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVE 435
P +++GDGPI LVLAPTRELA QI++ + FG +S ++ C++GGA K Q L++GV+
Sbjct: 167 PTVKKGDGPIVLVLAPTRELAMQIERESERFGKSSKLKCACIYGGADKYSQRALLQQGVD 226
Query: 436 IVIATPGRLIDFLEKGTTNLQRCTF 510
+VIATPGRLIDFLE TT L+R T+
Sbjct: 227 VVIATPGRLIDFLESETTTLRRVTY 251
Score = 68.9 bits (161), Expect = 1e-10
Identities = 36/50 (72%), Positives = 38/50 (76%)
Frame = +3
Query: 468 FLGKGHNQLTAVHILVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSA 617
FL L V LVLDEADRMLDMGFE QIRKI+ QIRPDRQTLM+SA
Sbjct: 238 FLESETTTLRRVTYLVLDEADRMLDMGFEIQIRKILGQIRPDRQTLMFSA 287
Score = 42.7 bits (96), Expect = 0.008
Identities = 15/50 (30%), Positives = 32/50 (64%)
Frame = +3
Query: 42 EVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGV 191
+V +P + + +FP Y+ V +++P+PIQ+ +P+ +SG +L+G+
Sbjct: 95 KVPDPFLSWTDTHFPQYIMNEVTHAKFEKPSPIQSLAFPVVLSGHDLIGI 144
Score = 36.7 bits (81), Expect = 0.53
Identities = 14/19 (73%), Positives = 19/19 (100%)
Frame = +2
Query: 194 QTGSGKTLAYILPAIVHIN 250
+TGSGKTL+++LP+IVHIN
Sbjct: 146 ETGSGKTLSFLLPSIVHIN 164
>UniRef50_Q4N215 Cluster: RNA helicase, putative; n=3;
Aconoidasida|Rep: RNA helicase, putative - Theileria
parva
Length = 635
Score = 105 bits (252), Expect = 1e-21
Identities = 50/83 (60%), Positives = 62/83 (74%)
Frame = +1
Query: 262 IRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIV 441
+R GDGPI LVLAPTRELA+QI++ A FG +S ++ + +GG PKR Q L RGVEI+
Sbjct: 278 LRPGDGPIVLVLAPTRELAEQIKETALVFGRSSKLKTSVAYGGVPKRFQTIALRRGVEIL 337
Query: 442 IATPGRLIDFLEKGTTNLQRCTF 510
IA PGRLIDFLE TNL+R T+
Sbjct: 338 IACPGRLIDFLESSVTNLRRVTY 360
Score = 74.5 bits (175), Expect = 2e-12
Identities = 40/58 (68%), Positives = 43/58 (74%)
Frame = +3
Query: 444 CYSR*IN*FLGKGHNQLTAVHILVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSA 617
C R I+ FL L V LVLDEADRMLDMGFEPQIRKI+ QIRPDRQTLM+SA
Sbjct: 340 CPGRLID-FLESSVTNLRRVTYLVLDEADRMLDMGFEPQIRKIVGQIRPDRQTLMFSA 396
Score = 67.3 bits (157), Expect = 3e-10
Identities = 27/58 (46%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = +3
Query: 21 EVTV-SGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGV 191
E+TV G +V P+ FE +FP Y+ ++ G+KEPTPIQ Q WPIA+SG++++G+
Sbjct: 196 EITVVHGRDVPKPVVKFEYTSFPRYILSSIEAAGFKEPTPIQVQSWPIALSGRDMIGI 253
Score = 39.5 bits (88), Expect = 0.075
Identities = 17/23 (73%), Positives = 20/23 (86%)
Frame = +2
Query: 194 QTGSGKTLAYILPAIVHINNHRL 262
+TGSGKTLA++LPAIVHIN L
Sbjct: 255 ETGSGKTLAFLLPAIVHINAQAL 277
>UniRef50_UPI00006CD03A Cluster: P68-like protein, putative; n=1;
Tetrahymena thermophila SB210|Rep: P68-like protein,
putative - Tetrahymena thermophila SB210
Length = 699
Score = 104 bits (249), Expect = 2e-21
Identities = 48/84 (57%), Positives = 61/84 (72%)
Frame = +1
Query: 259 PIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEI 438
P++ G+GPIALVLAPTRELA QIQ+ FG + + CV+GGAPK Q ++L G +I
Sbjct: 280 PVKPGEGPIALVLAPTRELANQIQEQCFKFGSKCKISSVCVYGGAPKIYQEKELRNGCDI 339
Query: 439 VIATPGRLIDFLEKGTTNLQRCTF 510
VIATPGRLIDFLE +L+R T+
Sbjct: 340 VIATPGRLIDFLESNVIDLKRVTY 363
Score = 71.3 bits (167), Expect = 2e-11
Identities = 38/58 (65%), Positives = 40/58 (68%)
Frame = +3
Query: 468 FLGKGHNQLTAVHILVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSAYLAQKKXR 641
FL L V LVLDEADRMLDMGFEP IRKI+ QIRPDRQTLM+SA Q R
Sbjct: 350 FLESNVIDLKRVTYLVLDEADRMLDMGFEPSIRKIVGQIRPDRQTLMFSATWPQTVRR 407
Score = 37.9 bits (84), Expect = 0.23
Identities = 15/19 (78%), Positives = 19/19 (100%)
Frame = +2
Query: 194 QTGSGKTLAYILPAIVHIN 250
QTGSGKTL+++LPA+VHIN
Sbjct: 258 QTGSGKTLSFMLPALVHIN 276
Score = 33.5 bits (73), Expect = 4.9
Identities = 14/36 (38%), Positives = 19/36 (52%)
Frame = +3
Query: 42 EVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQ 149
EV P + E FP Y+ ++ + EP PIQAQ
Sbjct: 188 EVPQPFIKWNETKFPKYIMSVIEDSKFSEPMPIQAQ 223
>UniRef50_Q8IL14 Cluster: Helicase, truncated, putative; n=3;
Eukaryota|Rep: Helicase, truncated, putative -
Plasmodium falciparum (isolate 3D7)
Length = 352
Score = 104 bits (249), Expect = 2e-21
Identities = 49/85 (57%), Positives = 60/85 (70%)
Frame = +1
Query: 256 PPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVE 435
P ++ GDGPI LVLAPTRELA+QI+Q F S +RNTC +GG PK Q L++GV
Sbjct: 179 PNLKYGDGPIVLVLAPTRELAEQIRQECIKFSTESKIRNTCAYGGVPKSGQIYALKQGVH 238
Query: 436 IVIATPGRLIDFLEKGTTNLQRCTF 510
I+IA PGRLID LE+ TNL R T+
Sbjct: 239 ILIACPGRLIDLLEQNVTNLMRVTY 263
Score = 72.9 bits (171), Expect = 7e-12
Identities = 38/58 (65%), Positives = 43/58 (74%)
Frame = +3
Query: 444 CYSR*IN*FLGKGHNQLTAVHILVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSA 617
C R I+ L + L V LVLDEAD+MLDMGFE QIRKI++QIRPDRQTLMWSA
Sbjct: 243 CPGRLID-LLEQNVTNLMRVTYLVLDEADKMLDMGFELQIRKIVDQIRPDRQTLMWSA 299
Score = 61.7 bits (143), Expect = 2e-08
Identities = 26/60 (43%), Positives = 38/60 (63%), Gaps = 1/60 (1%)
Frame = +3
Query: 12 NNHEVTV-SGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVG 188
+ H++T+ G V P+ + FPDYV + +K PTPIQ QGWPIA+SGK+++G
Sbjct: 96 DKHKITILEGENVPKPVVSINKIGFPDYVIKSLKNNNIVAPTPIQIQGWPIALSGKDMIG 155
Score = 37.9 bits (84), Expect = 0.23
Identities = 16/25 (64%), Positives = 20/25 (80%)
Frame = +2
Query: 173 KEFSWRTQTGSGKTLAYILPAIVHI 247
K+ + +TGSGKTLA+ILPA VHI
Sbjct: 151 KDMIGKAETGSGKTLAFILPAFVHI 175
>UniRef50_Q4TEE5 Cluster: Chromosome undetermined SCAF5464, whole
genome shotgun sequence; n=1; Tetraodon
nigroviridis|Rep: Chromosome undetermined SCAF5464,
whole genome shotgun sequence - Tetraodon nigroviridis
(Green puffer)
Length = 307
Score = 101 bits (241), Expect = 2e-20
Identities = 53/114 (46%), Positives = 69/114 (60%)
Frame = +3
Query: 276 WSDCFGLGAYQRVSTTNSASCCRFWTHILCS*HVCVWWCS*KRASPGLGEGSRNSHCYSR 455
W+ FG G ++ + SA R + H+ V C+ ++PG GE + H ++R
Sbjct: 189 WTHMFGFGPHEGIGPAGSAGSIRLRKVLTHQKHLRVRRCAEGTSNPGSGERCGDLHRHAR 248
Query: 456 *IN*FLGKGHNQLTAVHILVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSA 617
+ G +QL LVLDEADRMLDMGFEPQIRKI++QIRPDRQTLMWSA
Sbjct: 249 ASHRLPGGREDQLRRCTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSA 302
Score = 66.5 bits (155), Expect = 6e-10
Identities = 27/57 (47%), Positives = 40/57 (70%)
Frame = +3
Query: 21 EVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGV 191
E+T+ G PI F +A+FP YV + +KEPTPIQAQG+P+A+SG+++VG+
Sbjct: 73 EITIRGTGCPKPIIKFHQAHFPQYVMDVLMQQNFKEPTPIQAQGFPLALSGRDMVGI 129
>UniRef50_Q5JKF2 Cluster: DEAD-box ATP-dependent RNA helicase 40;
n=8; Magnoliophyta|Rep: DEAD-box ATP-dependent RNA
helicase 40 - Oryza sativa subsp. japonica (Rice)
Length = 792
Score = 98.3 bits (234), Expect = 2e-19
Identities = 69/203 (33%), Positives = 95/203 (46%), Gaps = 1/203 (0%)
Frame = +3
Query: 12 NNHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGV 191
+ HE+TV G V PI FE FP + + ++ G+ PTPIQAQ WPIA+ +++V +
Sbjct: 134 HRHEITVVGDNVPAPITSFETGGFPPEILKEIQRAGFSSPTPIQAQSWPIALQCQDVVAI 193
Query: 192 LKRVPAKRWPTSCQPLCT*TTTAYSER*WSDCFGLGAYQRVSTTNSASCCRFWTHILCS* 371
K K + R L + ++T +F S
Sbjct: 194 AKTGSGKTLGYLLPGFMHIKRLQNNPRSGPTVLVLAPTRELATQILEEAVKFGRSSRIS- 252
Query: 372 HVCVWWCS*KRAS-PGLGEGSRNSHCYSR*IN*FLGKGHNQLTAVHILVLDEADRMLDMG 548
C++ + K L G +N L L V LVLDEADRMLDMG
Sbjct: 253 STCLYGGAPKGPQLRDLDRGVDVVVATPGRLNDILEMRRISLKQVSYLVLDEADRMLDMG 312
Query: 549 FEPQIRKIIEQIRPDRQTLMWSA 617
FEPQIRKI+++I P RQTLM++A
Sbjct: 313 FEPQIRKIVKEIPPRRQTLMYTA 335
Score = 94.3 bits (224), Expect = 2e-18
Identities = 43/78 (55%), Positives = 58/78 (74%)
Frame = +1
Query: 277 GPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPG 456
GP LVLAPTRELA QI + A FG +S + +TC++GGAPK Q RDL+RGV++V+ATPG
Sbjct: 222 GPTVLVLAPTRELATQILEEAVKFGRSSRISSTCLYGGAPKGPQLRDLDRGVDVVVATPG 281
Query: 457 RLIDFLEKGTTNLQRCTF 510
RL D LE +L++ ++
Sbjct: 282 RLNDILEMRRISLKQVSY 299
>UniRef50_A2EVI2 Cluster: DEAD/DEAH box helicase family protein;
n=1; Trichomonas vaginalis G3|Rep: DEAD/DEAH box
helicase family protein - Trichomonas vaginalis G3
Length = 598
Score = 97.9 bits (233), Expect = 2e-19
Identities = 47/84 (55%), Positives = 57/84 (67%)
Frame = +1
Query: 259 PIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEI 438
P+ RGDGPI LVL+PTRELAQQI +VA F +R TC+FGGA + QA DL +
Sbjct: 192 PMYRGDGPIVLVLSPTRELAQQIAEVAKGFCDNLMIRQTCLFGGAGRGPQANDLRHLPSL 251
Query: 439 VIATPGRLIDFLEKGTTNLQRCTF 510
V+ATPGRLIDF+E G + R F
Sbjct: 252 VVATPGRLIDFIEGGQCPMNRVNF 275
Score = 66.1 bits (154), Expect = 8e-10
Identities = 32/50 (64%), Positives = 38/50 (76%)
Frame = +3
Query: 468 FLGKGHNQLTAVHILVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSA 617
F+ G + V+ LVLDEAD+MLDMGFEPQIRKII I DRQT+M+SA
Sbjct: 262 FIEGGQCPMNRVNFLVLDEADQMLDMGFEPQIRKIIGHISKDRQTMMFSA 311
Score = 47.2 bits (107), Expect = 4e-04
Identities = 19/52 (36%), Positives = 33/52 (63%)
Frame = +3
Query: 42 EVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVLK 197
+V +P FEE N PD + + + +++PTPIQ+ P+A+ G +L+G+ K
Sbjct: 119 DVPSPALTFEELNLPDTITKTITDNKWEKPTPIQSVSIPVALKGHDLIGIAK 170
>UniRef50_Q8SRB2 Cluster: ATP-dependent RNA helicase DBP2; n=103;
Eukaryota|Rep: ATP-dependent RNA helicase DBP2 -
Encephalitozoon cuniculi
Length = 495
Score = 97.9 bits (233), Expect = 2e-19
Identities = 48/88 (54%), Positives = 59/88 (67%)
Frame = +1
Query: 247 KQPPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLER 426
K P+RRGDGPI LVLAPTREL QI++V +F +R+T V+GGA + Q R L
Sbjct: 150 KDQQPLRRGDGPIVLVLAPTRELVMQIKKVVDEFCGMFNLRSTAVYGGASSQPQIRALHE 209
Query: 427 GVEIVIATPGRLIDFLEKGTTNLQRCTF 510
G E+VIATPGRLID ++G L R TF
Sbjct: 210 GAEVVIATPGRLIDLHDQGHAPLSRVTF 237
Score = 71.3 bits (167), Expect = 2e-11
Identities = 33/47 (70%), Positives = 38/47 (80%)
Frame = +3
Query: 477 KGHNQLTAVHILVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSA 617
+GH L+ V LVLDEADRMLDMGFEPQ+RKII + +RQTLMWSA
Sbjct: 227 QGHAPLSRVTFLVLDEADRMLDMGFEPQLRKIIPKTNANRQTLMWSA 273
Score = 65.7 bits (153), Expect = 1e-09
Identities = 28/58 (48%), Positives = 39/58 (67%)
Frame = +3
Query: 18 HEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGV 191
+E+ V G V +PIQ FEEA F V + G+ EPT IQ QGWP+A+SG+++VG+
Sbjct: 73 NEMIVKGTNVPHPIQKFEEAGFSSEVVSSLVEKGFSEPTAIQGQGWPMALSGRDMVGI 130
Score = 35.5 bits (78), Expect = 1.2
Identities = 14/22 (63%), Positives = 19/22 (86%)
Frame = +2
Query: 194 QTGSGKTLAYILPAIVHINNHR 259
QTGSGKTL++ILPA+VH + +
Sbjct: 132 QTGSGKTLSFILPALVHAKDQQ 153
>UniRef50_Q9LYJ9 Cluster: DEAD-box ATP-dependent RNA helicase 46;
n=16; Eukaryota|Rep: DEAD-box ATP-dependent RNA helicase
46 - Arabidopsis thaliana (Mouse-ear cress)
Length = 645
Score = 96.7 bits (230), Expect = 5e-19
Identities = 70/205 (34%), Positives = 98/205 (47%), Gaps = 5/205 (2%)
Frame = +3
Query: 18 HEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVLK 197
HE+TVSG +V P+ FE P+ + + V + G+ P+PIQAQ WPIAM +++V + K
Sbjct: 147 HEITVSGGQVPPPLMSFEATGLPNELLREVYSAGFSAPSPIQAQSWPIAMQNRDIVAIAK 206
Query: 198 RVPAKRWPTSCQPLCT*TTTAYSER*WSDCFGLGAYQRVSTTNSASCCRFW--THILCS* 371
K R L + ++T +F + I C+
Sbjct: 207 TGSGKTLGYLIPGFMHLQRIHNDSRMGPTILVLSPTRELATQIQVEALKFGKSSKISCA- 265
Query: 372 HVCVWWCS*KRASPGLGEGSRNSH---CYSR*IN*FLGKGHNQLTAVHILVLDEADRMLD 542
C++ + K P L E R +N L L V LVLDEADRMLD
Sbjct: 266 --CLYGGAPK--GPQLKEIERGVDIVVATPGRLNDILEMKRISLHQVSYLVLDEADRMLD 321
Query: 543 MGFEPQIRKIIEQIRPDRQTLMWSA 617
MGFEPQIRKI+ ++ RQTLM++A
Sbjct: 322 MGFEPQIRKIVNEVPTKRQTLMYTA 346
Score = 87.0 bits (206), Expect = 4e-16
Identities = 41/78 (52%), Positives = 55/78 (70%)
Frame = +1
Query: 277 GPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPG 456
GP LVL+PTRELA QIQ A FG +S + C++GGAPK Q +++ERGV+IV+ATPG
Sbjct: 233 GPTILVLSPTRELATQIQVEALKFGKSSKISCACLYGGAPKGPQLKEIERGVDIVVATPG 292
Query: 457 RLIDFLEKGTTNLQRCTF 510
RL D LE +L + ++
Sbjct: 293 RLNDILEMKRISLHQVSY 310
>UniRef50_Q9LKL6 Cluster: DEAD box protein P68; n=5;
Viridiplantae|Rep: DEAD box protein P68 - Pisum sativum
(Garden pea)
Length = 622
Score = 95.9 bits (228), Expect = 8e-19
Identities = 48/96 (50%), Positives = 64/96 (66%), Gaps = 1/96 (1%)
Frame = +1
Query: 226 LASHCAHKQPPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHT-SYVRNTCVFGGAPKR 402
+ HC + PPIRRGDGP+ALVLAPTRELAQQI++ F + ++N V GG
Sbjct: 176 MLQHCLVQ--PPIRRGDGPLALVLAPTRELAQQIEKEVQAFSRSLESLKNCIVVGGTNIE 233
Query: 403 EQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTF 510
+Q +L GVEI +ATPGR ID L++G T+L R ++
Sbjct: 234 KQRSELRAGVEIAVATPGRFIDHLQQGNTSLSRISY 269
Score = 59.3 bits (137), Expect = 9e-08
Identities = 27/49 (55%), Positives = 37/49 (75%)
Frame = +3
Query: 471 LGKGHNQLTAVHILVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSA 617
L +G+ L+ + +VLDEADRMLDMGFEPQIR+I+ + QTL++SA
Sbjct: 257 LQQGNTSLSRISYVVLDEADRMLDMGFEPQIREIMRSLPEKHQTLLFSA 305
Score = 38.7 bits (86), Expect = 0.13
Identities = 21/60 (35%), Positives = 32/60 (53%), Gaps = 2/60 (3%)
Frame = +3
Query: 15 NHEVTVSG--VEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVG 188
N +VTVS PI+ F + + + + Y P+ IQAQ PIA+SG++L+G
Sbjct: 101 NLDVTVSSDSTAAPGPIESFNDMCLHPSIMKDIAYHEYTRPSSIQAQAMPIALSGRDLLG 160
>UniRef50_Q4QIQ9 Cluster: ATP-dependent DEAD/H RNA helicase,
putative; n=6; Trypanosomatidae|Rep: ATP-dependent
DEAD/H RNA helicase, putative - Leishmania major
Length = 502
Score = 95.9 bits (228), Expect = 8e-19
Identities = 48/86 (55%), Positives = 56/86 (65%), Gaps = 1/86 (1%)
Frame = +1
Query: 256 PPIRRGDGPIALVLAPTRELAQQIQ-QVAADFGHTSYVRNTCVFGGAPKREQARDLERGV 432
PP++ GDGPIALVLAPTRELA QI+ + + TCV+GG PK Q R L GV
Sbjct: 211 PPLQPGDGPIALVLAPTRELAVQIETETRKALTRVPSIMTTCVYGGTPKGPQQRALRAGV 270
Query: 433 EIVIATPGRLIDFLEKGTTNLQRCTF 510
+ IATPGRLID LE TNL R T+
Sbjct: 271 HVCIATPGRLIDLLETNCTNLLRVTY 296
Score = 63.7 bits (148), Expect = 4e-09
Identities = 35/52 (67%), Positives = 38/52 (73%)
Frame = +3
Query: 492 LTAVHILVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSAYLAQKKXRNL 647
L V L LDEADRMLDMGFE QIRKI QIR DRQTLM+SA ++ RNL
Sbjct: 291 LLRVTYLTLDEADRMLDMGFEDQIRKICSQIRTDRQTLMFSA-TWPREIRNL 341
Score = 52.4 bits (120), Expect = 1e-05
Identities = 20/60 (33%), Positives = 36/60 (60%)
Frame = +3
Query: 18 HEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVLK 197
+ +T+ G V P+ F + PD + Q G+++PTPIQ+ WP+ ++ +++VGV K
Sbjct: 131 NSITIYGDRVPQPMLEFSDLVAPDAIHQAFMDAGFQKPTPIQSVSWPVLLNSRDIVGVAK 190
>UniRef50_Q5VQL1-2 Cluster: Isoform 2 of Q5VQL1 ; n=2;
Magnoliophyta|Rep: Isoform 2 of Q5VQL1 - Oryza sativa
subsp. japonica (Rice)
Length = 759
Score = 95.1 bits (226), Expect = 1e-18
Identities = 44/79 (55%), Positives = 56/79 (70%)
Frame = +1
Query: 274 DGPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATP 453
DGP LVL+PTRELA QIQ A FG +S + + C++GGAPK Q RDLERG +IV+ATP
Sbjct: 302 DGPTVLVLSPTRELATQIQDEAKKFGRSSRISSVCLYGGAPKGPQLRDLERGADIVVATP 361
Query: 454 GRLIDFLEKGTTNLQRCTF 510
GRL D LE +L + ++
Sbjct: 362 GRLNDILEMRRVSLHQVSY 380
Score = 84.6 bits (200), Expect = 2e-15
Identities = 61/180 (33%), Positives = 85/180 (47%), Gaps = 1/180 (0%)
Frame = +3
Query: 81 FPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVLKRVPAKRWPTSCQPLCT*TTTA 260
F + V+ G+ PTPIQAQ WPIA+ +++V V K K
Sbjct: 238 FKSTIYVKVQQAGFSAPTPIQAQSWPIALRNRDIVAVAKTGSGKTLGYLIPGFILLKRLQ 297
Query: 261 YSER*WSDCFGLGAYQRVSTTNSASCCRFWTHILCS*HVCVWWCS*KRAS-PGLGEGSRN 437
++ R L + ++T +F S VC++ + K L G+
Sbjct: 298 HNSRDGPTVLVLSPTRELATQIQDEAKKFGRSSRIS-SVCLYGGAPKGPQLRDLERGADI 356
Query: 438 SHCYSR*IN*FLGKGHNQLTAVHILVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSA 617
+N L L V LVLDEADRMLDMGFEPQIRKI++Q++P RQTLM++A
Sbjct: 357 VVATPGRLNDILEMRRVSLHQVSYLVLDEADRMLDMGFEPQIRKIVKQVQPKRQTLMFTA 416
>UniRef50_Q9SQV1 Cluster: Probable DEAD-box ATP-dependent RNA helicase
40; n=2; core eudicotyledons|Rep: Probable DEAD-box
ATP-dependent RNA helicase 40 - Arabidopsis thaliana
(Mouse-ear cress)
Length = 1088
Score = 95.1 bits (226), Expect = 1e-18
Identities = 69/205 (33%), Positives = 97/205 (47%), Gaps = 5/205 (2%)
Frame = +3
Query: 18 HEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVLK 197
HEVT +G + P FE + P + + + + G+ PTPIQAQ WPIA+ +++V + K
Sbjct: 421 HEVTTTGENIPAPYITFESSGLPPEILRELLSAGFPSPTPIQAQTWPIALQSRDIVAIAK 480
Query: 198 RVPAKRWPTSCQPLCT*TTTAYSER*WSDCFGLGAYQRVSTTNSASCCRFW--THILCS* 371
K R L + ++T RF + I C+
Sbjct: 481 TGSGKTLGYLIPAFILLRHCRNDSRNGPTVLILAPTRELATQIQDEALRFGRSSRISCT- 539
Query: 372 HVCVWWCS*KRASPGLGEGSRNSHCYSR*---IN*FLGKGHNQLTAVHILVLDEADRMLD 542
C++ + K P L E R + +N L V +LVLDEADRMLD
Sbjct: 540 --CLYGGAPK--GPQLKELERGADIVVATPGRLNDILEMKMIDFQQVSLLVLDEADRMLD 595
Query: 543 MGFEPQIRKIIEQIRPDRQTLMWSA 617
MGFEPQIRKI+ +I P RQTLM++A
Sbjct: 596 MGFEPQIRKIVNEIPPRRQTLMYTA 620
Score = 89.8 bits (213), Expect = 5e-17
Identities = 42/76 (55%), Positives = 54/76 (71%)
Frame = +1
Query: 274 DGPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATP 453
+GP L+LAPTRELA QIQ A FG +S + TC++GGAPK Q ++LERG +IV+ATP
Sbjct: 506 NGPTVLILAPTRELATQIQDEALRFGRSSRISCTCLYGGAPKGPQLKELERGADIVVATP 565
Query: 454 GRLIDFLEKGTTNLQR 501
GRL D LE + Q+
Sbjct: 566 GRLNDILEMKMIDFQQ 581
>UniRef50_A7RY08 Cluster: Predicted protein; n=2; Eukaryota|Rep:
Predicted protein - Nematostella vectensis
Length = 518
Score = 91.5 bits (217), Expect = 2e-17
Identities = 44/85 (51%), Positives = 55/85 (64%)
Frame = +1
Query: 256 PPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVE 435
P ++ GDGPI L+ APTREL QQI A FG + VFGG K EQ++ L+ G E
Sbjct: 172 PELQVGDGPIVLICAPTRELCQQIYTEARRFGKAYNIHVVAVFGGGNKYEQSKALQEGAE 231
Query: 436 IVIATPGRLIDFLEKGTTNLQRCTF 510
IV+ATPGRLID ++ TNL R T+
Sbjct: 232 IVVATPGRLIDHVKAKATNLHRVTY 256
Score = 62.9 bits (146), Expect = 7e-09
Identities = 29/47 (61%), Positives = 34/47 (72%)
Frame = +3
Query: 492 LTAVHILVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSAYLAQK 632
L V LV DEADRM DMGFEPQ+R I +RPDRQTL++SA +K
Sbjct: 251 LHRVTYLVFDEADRMFDMGFEPQVRSIANNVRPDRQTLLFSATFKKK 297
Score = 46.0 bits (104), Expect = 9e-04
Identities = 22/70 (31%), Positives = 36/70 (51%), Gaps = 4/70 (5%)
Frame = +3
Query: 24 VTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVLK-- 197
+ VSG P F F + + ++ + Y +PT IQ Q PIA+SG++++G+ K
Sbjct: 94 IKVSGAMPARPCISFAHFGFDEQMMASIRKLEYTQPTQIQCQALPIALSGRDIIGIAKTG 153
Query: 198 --RVPAKRWP 221
+ A WP
Sbjct: 154 SGKTAAFLWP 163
>UniRef50_Q9P7C7 Cluster: Pre-mRNA-processing ATP-dependent RNA
helicase prp11; n=1; Schizosaccharomyces pombe|Rep:
Pre-mRNA-processing ATP-dependent RNA helicase prp11 -
Schizosaccharomyces pombe (Fission yeast)
Length = 1014
Score = 91.1 bits (216), Expect = 2e-17
Identities = 43/91 (47%), Positives = 58/91 (63%), Gaps = 3/91 (3%)
Frame = +1
Query: 247 KQPPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLER 426
K P++ G+GPIA+++ PTRELA QI + F +R C +GGAP ++Q DL+R
Sbjct: 481 KDQRPLKTGEGPIAIIMTPTRELAVQIFRECKPFLKLLNIRACCAYGGAPIKDQIADLKR 540
Query: 427 GVEIVIATPGRLIDFLEKG---TTNLQRCTF 510
G EIV+ TPGR+ID L TNL RCT+
Sbjct: 541 GAEIVVCTPGRMIDVLSANAGRVTNLHRCTY 571
Score = 60.9 bits (141), Expect = 3e-08
Identities = 26/36 (72%), Positives = 32/36 (88%)
Frame = +3
Query: 510 LVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSA 617
LVLDEADRM D+GFEPQ+ +II IRPDRQT+++SA
Sbjct: 572 LVLDEADRMFDLGFEPQVMRIINNIRPDRQTVLFSA 607
Score = 41.9 bits (94), Expect = 0.014
Identities = 16/58 (27%), Positives = 32/58 (55%)
Frame = +3
Query: 24 VTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVLK 197
+ + G++ P+ + + + ++GY++PT IQAQ P SG++++GV K
Sbjct: 406 IKIRGIDCPKPVTSWSQCGLSAQTISVINSLGYEKPTSIQAQAIPAITSGRDVIGVAK 463
>UniRef50_A4S3A0 Cluster: Predicted protein; n=2; Ostreococcus|Rep:
Predicted protein - Ostreococcus lucimarinus CCE9901
Length = 440
Score = 89.4 bits (212), Expect = 7e-17
Identities = 48/90 (53%), Positives = 58/90 (64%), Gaps = 2/90 (2%)
Frame = +1
Query: 244 HKQPPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLE 423
H QPP + G PI LVLAPTRELAQQ +V D G S VR CV+GGAPK EQ ++
Sbjct: 90 HSQPP-CKPGQ-PICLVLAPTRELAQQTAKVFDDAGEASGVRCVCVYGGAPKYEQKAQMK 147
Query: 424 R--GVEIVIATPGRLIDFLEKGTTNLQRCT 507
G +++ATPGRL DF+E+G L R T
Sbjct: 148 AGGGAAVIVATPGRLRDFMEEGVIKLDRVT 177
Score = 77.8 bits (183), Expect = 2e-13
Identities = 63/193 (32%), Positives = 92/193 (47%), Gaps = 5/193 (2%)
Frame = +3
Query: 54 PIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVLKRVPAKRWPTSCQ 233
P+ F +A F + + T +K P+PIQAQ WPI MSG ++VG+ K
Sbjct: 27 PVSSFADAGFSKELLR--VTAQFKTPSPIQAQSWPIIMSGHDMVGIAATGSGKTLAFGMP 84
Query: 234 PLCT*TTTAYSER*WSDCFGLGAYQRVS--TTNSASCCRFWTHILCS*HVCVWWCS*K-- 401
L + + C L + ++ T + + C VCV+ + K
Sbjct: 85 ALTQIHSQPPCKPGQPICLVLAPTRELAQQTAKVFDDAGEASGVRC---VCVYGGAPKYE 141
Query: 402 -RASPGLGEGSRNSHCYSR*IN*FLGKGHNQLTAVHILVLDEADRMLDMGFEPQIRKIIE 578
+A G G+ + F+ +G +L V +LVLDEADRMLD+GFEP+IR I
Sbjct: 142 QKAQMKAGGGAAVIVATPGRLRDFMEEGVIKLDRVTMLVLDEADRMLDLGFEPEIRAIAG 201
Query: 579 QIRPDRQTLMWSA 617
R DRQT+M+SA
Sbjct: 202 ATRADRQTVMFSA 214
>UniRef50_Q4IP34 Cluster: Pre-mRNA-processing ATP-dependent RNA
helicase PRP5; n=15; Pezizomycotina|Rep:
Pre-mRNA-processing ATP-dependent RNA helicase PRP5 -
Gibberella zeae (Fusarium graminearum)
Length = 1227
Score = 89.0 bits (211), Expect = 9e-17
Identities = 43/91 (47%), Positives = 58/91 (63%), Gaps = 3/91 (3%)
Frame = +1
Query: 247 KQPPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLER 426
K PP++ DGPI L++ PTRELA QI + F +R C +GGAP REQ +L+R
Sbjct: 660 KDQPPLKDTDGPIGLIMTPTRELAVQIHKDCKPFLKMMGLRAVCAYGGAPIREQIAELKR 719
Query: 427 GVEIVIATPGRLIDFL---EKGTTNLQRCTF 510
G EI++ TPGR+ID L + TNL+R T+
Sbjct: 720 GAEIIVCTPGRMIDLLAANQGRVTNLKRVTY 750
Score = 60.5 bits (140), Expect = 4e-08
Identities = 27/42 (64%), Positives = 33/42 (78%)
Frame = +3
Query: 492 LTAVHILVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSA 617
L V +VLDEADRM DMGFEPQ+ KI +RPDRQT+++SA
Sbjct: 745 LKRVTYVVLDEADRMFDMGFEPQVMKIFANMRPDRQTILFSA 786
Score = 49.2 bits (112), Expect = 9e-05
Identities = 21/58 (36%), Positives = 34/58 (58%)
Frame = +3
Query: 24 VTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVLK 197
+ V+G +V P+Q + + V +GY++PTPIQ Q P MSG++++GV K
Sbjct: 585 IKVNGKDVPKPVQKWAQCGLTRQTLDVVDNLGYEKPTPIQMQALPALMSGRDVIGVAK 642
>UniRef50_Q86XP3 Cluster: ATP-dependent RNA helicase DDX42; n=47;
Coelomata|Rep: ATP-dependent RNA helicase DDX42 - Homo
sapiens (Human)
Length = 938
Score = 89.0 bits (211), Expect = 9e-17
Identities = 41/80 (51%), Positives = 54/80 (67%)
Frame = +1
Query: 271 GDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIAT 450
GDGPIA+++ PTREL QQI FG +R+ V+GG EQA+ L+ G EIV+ T
Sbjct: 324 GDGPIAVIVCPTRELCQQIHAECKRFGKAYNLRSVAVYGGGSMWEQAKALQEGAEIVVCT 383
Query: 451 PGRLIDFLEKGTTNLQRCTF 510
PGRLID ++K TNLQR ++
Sbjct: 384 PGRLIDHVKKKATNLQRVSY 403
Score = 60.1 bits (139), Expect = 5e-08
Identities = 29/52 (55%), Positives = 34/52 (65%)
Frame = +3
Query: 477 KGHNQLTAVHILVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSAYLAQK 632
K L V LV DEADRM DMGFE Q+R I +RPDRQTL++SA +K
Sbjct: 393 KKATNLQRVSYLVFDEADRMFDMGFEYQVRSIASHVRPDRQTLLFSATFRKK 444
Score = 48.4 bits (110), Expect = 2e-04
Identities = 20/56 (35%), Positives = 32/56 (57%)
Frame = +3
Query: 30 VSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVLK 197
VSG P F F + + ++ Y +PTPIQ QG P+A+SG++++G+ K
Sbjct: 243 VSGAAPPRPGSSFAHFGFDEQLMHQIRKSEYTQPTPIQCQGVPVALSGRDMIGIAK 298
>UniRef50_UPI0000F1E5FF Cluster: PREDICTED: similar to Pl10,
partial; n=1; Danio rerio|Rep: PREDICTED: similar to
Pl10, partial - Danio rerio
Length = 245
Score = 88.6 bits (210), Expect = 1e-16
Identities = 43/80 (53%), Positives = 54/80 (67%)
Frame = +1
Query: 265 RRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVI 444
RR PI+LVLAPTRELA QI A F + S+VR V+GGA +Q RDLERG +++
Sbjct: 166 RRKQYPISLVLAPTRELALQIYDEARKFSYRSHVRPCVVYGGADIGQQIRDLERGCHLLV 225
Query: 445 ATPGRLIDFLEKGTTNLQRC 504
ATPGRL+D +E+G L C
Sbjct: 226 ATPGRLVDMMERGKIGLDYC 245
>UniRef50_Q7K4L8 Cluster: LD33749p; n=1; Drosophila
melanogaster|Rep: LD33749p - Drosophila melanogaster
(Fruit fly)
Length = 703
Score = 88.6 bits (210), Expect = 1e-16
Identities = 61/196 (31%), Positives = 100/196 (51%), Gaps = 5/196 (2%)
Frame = +3
Query: 45 VHNPIQYFEE--ANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVLKRVPAKRW 218
+ NP+ FE+ A +PD +++ K MG+ +P+PIQ+Q WPI + G +++G+ + K
Sbjct: 277 IPNPVWTFEQCFAEYPDMLEEITK-MGFSKPSPIQSQAWPILLQGHDMIGIAQTGTGKTL 335
Query: 219 PTSCQPLC--T*TTTAYSER*WSDCFGLGAYQRVSTTNSASCCRFWTHILCS*HVCVWWC 392
+ +T R ++ L + ++ ++ + + VCV+
Sbjct: 336 AFLLPGMIHTEYQSTPRGTRGGANVLVLAPTRELALQIEMEVKKYSFRGMKA--VCVYGG 393
Query: 393 S*KRAS-PGLGEGSRNSHCYSR*IN*FLGKGHNQLTAVHILVLDEADRMLDMGFEPQIRK 569
+ L G+ C +N + ++ + LVLDEADRMLDMGFEPQIRK
Sbjct: 394 GNRNMQISDLERGAEIIICTPGRLNDLIMANVIDVSTITYLVLDEADRMLDMGFEPQIRK 453
Query: 570 IIEQIRPDRQTLMWSA 617
++ IRPDRQT+M SA
Sbjct: 454 VMLDIRPDRQTIMTSA 469
Score = 68.1 bits (159), Expect = 2e-10
Identities = 37/92 (40%), Positives = 50/92 (54%)
Frame = +1
Query: 235 HCAHKQPPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQAR 414
H ++ P RG G LVLAPTRELA QI+ + ++ CV+GG + Q
Sbjct: 344 HTEYQSTPRGTRG-GANVLVLAPTRELALQIEMEVKKYSFRG-MKAVCVYGGGNRNMQIS 401
Query: 415 DLERGVEIVIATPGRLIDFLEKGTTNLQRCTF 510
DLERG EI+I TPGRL D + ++ T+
Sbjct: 402 DLERGAEIIICTPGRLNDLIMANVIDVSTITY 433
>UniRef50_O00571 Cluster: ATP-dependent RNA helicase DDX3X; n=74;
Metazoa|Rep: ATP-dependent RNA helicase DDX3X - Homo
sapiens (Human)
Length = 662
Score = 88.2 bits (209), Expect = 2e-16
Identities = 43/82 (52%), Positives = 55/82 (67%)
Frame = +1
Query: 265 RRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVI 444
RR PI+LVLAPTRELA QI + A F + S VR V+GGA +Q RDLERG +++
Sbjct: 262 RRKQYPISLVLAPTRELAVQIYEEARKFSYRSRVRPCVVYGGADIGQQIRDLERGCHLLV 321
Query: 445 ATPGRLIDFLEKGTTNLQRCTF 510
ATPGRL+D +E+G L C +
Sbjct: 322 ATPGRLVDMMERGKIGLDFCKY 343
Score = 52.4 bits (120), Expect = 1e-05
Identities = 28/40 (70%), Positives = 33/40 (82%), Gaps = 4/40 (10%)
Frame = +3
Query: 510 LVLDEADRMLDMGFEPQIRKIIEQ--IRPD--RQTLMWSA 617
LVLDEADRMLDMGFEPQIR+I+EQ + P R T+M+SA
Sbjct: 344 LVLDEADRMLDMGFEPQIRRIVEQDTMPPKGVRHTMMFSA 383
>UniRef50_Q26696 Cluster: Putative DEAD-box RNA helicase HEL64; n=6;
Trypanosomatidae|Rep: Putative DEAD-box RNA helicase
HEL64 - Trypanosoma brucei brucei
Length = 568
Score = 87.8 bits (208), Expect = 2e-16
Identities = 46/84 (54%), Positives = 56/84 (66%)
Frame = +1
Query: 259 PIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEI 438
P+R GDGP+ +VLAPTRELAQQI++ V CV+GGAPK Q L RGV I
Sbjct: 169 PLRSGDGPMVVVLAPTRELAQQIEEETKKV-IPGDVYCGCVYGGAPKGPQLGLLRRGVHI 227
Query: 439 VIATPGRLIDFLEKGTTNLQRCTF 510
++ATPGRLIDFL+ NL R T+
Sbjct: 228 LVATPGRLIDFLDIKRINLHRVTY 251
Score = 68.9 bits (161), Expect = 1e-10
Identities = 35/50 (70%), Positives = 38/50 (76%)
Frame = +3
Query: 468 FLGKGHNQLTAVHILVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSA 617
FL L V LVLDEADRMLDMGFEPQ+RKI QIRPDRQT+M+SA
Sbjct: 238 FLDIKRINLHRVTYLVLDEADRMLDMGFEPQVRKICGQIRPDRQTVMFSA 287
Score = 51.2 bits (117), Expect = 2e-05
Identities = 22/62 (35%), Positives = 36/62 (58%), Gaps = 2/62 (3%)
Frame = +3
Query: 18 HEVTVSGVEVHNPIQYFEE--ANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGV 191
H +T+ G + P+ F+ P Y+ + + + PTP+QAQ WP+ +SG++LVGV
Sbjct: 86 HVITIFGDDCPPPMSSFDHLCGIVPPYLLKKLTAQNFTAPTPVQAQSWPVLLSGRDLVGV 145
Query: 192 LK 197
K
Sbjct: 146 AK 147
>UniRef50_Q013X8 Cluster: DEAD/DEAH box RNA helicase; n=1;
Ostreococcus tauri|Rep: DEAD/DEAH box RNA helicase -
Ostreococcus tauri
Length = 507
Score = 86.6 bits (205), Expect = 5e-16
Identities = 47/108 (43%), Positives = 64/108 (59%), Gaps = 2/108 (1%)
Frame = +1
Query: 193 SNGFRQNVGLHLASHCAHKQPPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRN 372
+ G + + L ++ + P+R+ +GP+ALVLAPTRELA QI A F
Sbjct: 148 TTGSGKTLAFLLPAYAQISRQRPLRKKEGPMALVLAPTRELATQIANEANAFNRAGVPAR 207
Query: 373 TC-VFGGAPKREQARDLERGVEIVIATPGRLIDFLE-KGTTNLQRCTF 510
C +FGGA K EQ + L G EIV+ATPGRLID L K + +L+R T+
Sbjct: 208 CCAIFGGASKHEQLKRLRAGAEIVVATPGRLIDVLHVKNSIDLRRVTY 255
Score = 36.7 bits (81), Expect = 0.53
Identities = 21/64 (32%), Positives = 35/64 (54%), Gaps = 1/64 (1%)
Frame = +3
Query: 3 ARGNNHEVTVSGVEVHNPIQYFEEANFPD-YVQQGVKTMGYKEPTPIQAQGWPIAMSGKN 179
AR +V V G E P++ F + D + + +K +GY+ PT IQAQ P+ G++
Sbjct: 84 ARREALDVRVDG-ETRAPVERFGQGGALDVHAIRALKRLGYETPTGIQAQCIPVICGGRD 142
Query: 180 LVGV 191
+G+
Sbjct: 143 ALGL 146
>UniRef50_Q7QA96 Cluster: ENSANGP00000013118; n=5; Eumetazoa|Rep:
ENSANGP00000013118 - Anopheles gambiae str. PEST
Length = 512
Score = 86.2 bits (204), Expect = 7e-16
Identities = 61/209 (29%), Positives = 102/209 (48%), Gaps = 5/209 (2%)
Frame = +3
Query: 6 RGNNHEVTVSGVEVHNPIQYFEEA--NFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKN 179
R N+ + + NP+ F +A +PD +++ ++ + PTPIQAQ WPI + G++
Sbjct: 87 REANNNIDNERKPIPNPVSEFHQAFGEYPDLMEE-LRKQKFTTPTPIQAQAWPILLRGED 145
Query: 180 LVGVLKRVPAKRWPTSCQPLC--T*TTTAYSER*WSDCFGLGAYQRVSTTNSASCCRFWT 353
L+G+ + K L ER + L + ++ ++
Sbjct: 146 LIGIAQTGTGKTLAFLLPALIHIEGQPIPRGERGGPNVLVLAPTRELALQIEKEVAKYQF 205
Query: 354 HILCS*HVCVWWCS*KRASPGL-GEGSRNSHCYSR*IN*FLGKGHNQLTAVHILVLDEAD 530
+ + VC++ +RA + G +N + +G ++ + L+LDEAD
Sbjct: 206 RGIKA--VCLYGGGDRRAQINVVRNGVEILIATPGRLNDLVQEGVVDVSTITYLILDEAD 263
Query: 531 RMLDMGFEPQIRKIIEQIRPDRQTLMWSA 617
RMLDMGFEPQIRK++ +RPDRQT+M SA
Sbjct: 264 RMLDMGFEPQIRKVLLDVRPDRQTVMTSA 292
Score = 76.2 bits (179), Expect = 7e-13
Identities = 39/91 (42%), Positives = 57/91 (62%), Gaps = 2/91 (2%)
Frame = +1
Query: 244 HKQPPPIRRGD--GPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARD 417
H + PI RG+ GP LVLAPTRELA QI++ A + ++ C++GG +R Q
Sbjct: 167 HIEGQPIPRGERGGPNVLVLAPTRELALQIEKEVAKYQFRG-IKAVCLYGGGDRRAQINV 225
Query: 418 LERGVEIVIATPGRLIDFLEKGTTNLQRCTF 510
+ GVEI+IATPGRL D +++G ++ T+
Sbjct: 226 VRNGVEILIATPGRLNDLVQEGVVDVSTITY 256
Score = 35.5 bits (78), Expect = 1.2
Identities = 13/18 (72%), Positives = 18/18 (100%)
Frame = +2
Query: 194 QTGSGKTLAYILPAIVHI 247
QTG+GKTLA++LPA++HI
Sbjct: 151 QTGTGKTLAFLLPALIHI 168
>UniRef50_A0C015 Cluster: Chromosome undetermined scaffold_14, whole
genome shotgun sequence; n=3; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_14,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 532
Score = 86.2 bits (204), Expect = 7e-16
Identities = 49/124 (39%), Positives = 70/124 (56%), Gaps = 2/124 (1%)
Frame = +1
Query: 265 RRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVI 444
R+ GP+ L+L PTRELA QIQ+ + F + + C++GGA KR Q L R +IV+
Sbjct: 137 RKKGGPMMLILVPTRELAMQIQEHISYFSEAYNMNSACIYGGADKRPQEMALARDPDIVV 196
Query: 445 ATPGRLIDFLEKGTTNLQRCTF*FLMRLIVCWIWDLNHKSE-KSLSKYAQTDR-L*CGQL 618
ATPGRLIDFL+ TNL T +L+ + D+ + + + + Y + DR
Sbjct: 197 ATPGRLIDFLDAQVTNLHNVT--YLVLDEADRMLDMGFEQQVRKIDSYIREDRQTVFFSA 254
Query: 619 TWPK 630
TWPK
Sbjct: 255 TWPK 258
Score = 47.6 bits (108), Expect = 3e-04
Identities = 20/62 (32%), Positives = 36/62 (58%), Gaps = 2/62 (3%)
Frame = +3
Query: 12 NNHEVTV--SGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLV 185
+ H + V + ++V P +++ FP+ + + + Y PTPIQA +PI MSG +L+
Sbjct: 53 DEHSIVVEQNDIQVPQPFIEWKDCQFPNQLNKRISLKAYNRPTPIQASVFPIIMSGHDLI 112
Query: 186 GV 191
G+
Sbjct: 113 GI 114
Score = 41.5 bits (93), Expect = 0.019
Identities = 18/32 (56%), Positives = 24/32 (75%)
Frame = +2
Query: 194 QTGSGKTLAYILPAIVHINNHRLFGEVMVRLL 289
QTGSGKT+AY+LP +VHI + R G M+ +L
Sbjct: 116 QTGSGKTIAYLLPGLVHIESQRKKGGPMMLIL 147
>UniRef50_Q6BML1 Cluster: Pre-mRNA-processing ATP-dependent RNA
helicase PRP5; n=4; Saccharomycetales|Rep:
Pre-mRNA-processing ATP-dependent RNA helicase PRP5 -
Debaryomyces hansenii (Yeast) (Torulaspora hansenii)
Length = 913
Score = 86.2 bits (204), Expect = 7e-16
Identities = 40/88 (45%), Positives = 56/88 (63%), Gaps = 3/88 (3%)
Frame = +1
Query: 256 PPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVE 435
PP+RRGDGPI L++ PTRELA QI + F + + C FGG+ Q +L++G +
Sbjct: 383 PPLRRGDGPIGLIMTPTRELALQIHKELNHFTKKLNISSCCCFGGSSIESQIAELKKGAQ 442
Query: 436 IVIATPGRLIDFLEKGT---TNLQRCTF 510
I++ TPGR+ID L + TNLQR T+
Sbjct: 443 IIVGTPGRIIDLLAANSGRVTNLQRVTY 470
Score = 63.3 bits (147), Expect = 5e-09
Identities = 28/47 (59%), Positives = 36/47 (76%)
Frame = +3
Query: 492 LTAVHILVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSAYLAQK 632
L V LVLDEADRM DMGFEPQ+ K+ ++RPDRQT+++SA +K
Sbjct: 465 LQRVTYLVLDEADRMFDMGFEPQVTKVFTRVRPDRQTVLFSATFPRK 511
Score = 39.9 bits (89), Expect = 0.056
Identities = 19/59 (32%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
Frame = +3
Query: 24 VTVSGVEVHNPIQYFEEANFPDYVQQGVK-TMGYKEPTPIQAQGWPIAMSGKNLVGVLK 197
+ V GV PI + + P + ++ + Y P+ IQAQ P MSG++++GV K
Sbjct: 304 IRVRGVNCTRPIIRWSQLGLPSTIMSIIEGRLNYSSPSSIQAQAIPAIMSGRDIIGVAK 362
>UniRef50_UPI00004988F8 Cluster: DEAD/DEAH box helicase; n=1;
Entamoeba histolytica HM-1:IMSS|Rep: DEAD/DEAH box
helicase - Entamoeba histolytica HM-1:IMSS
Length = 535
Score = 85.8 bits (203), Expect = 9e-16
Identities = 38/79 (48%), Positives = 52/79 (65%)
Frame = +1
Query: 274 DGPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATP 453
+GP L+LAPTREL QI A F + ++ FGG P+ Q +D + G +I +ATP
Sbjct: 225 EGPRVLILAPTRELVCQIADEAIKFTKGTAIKTVRCFGGVPQSSQMKDFQSGCDICVATP 284
Query: 454 GRLIDFLEKGTTNLQRCTF 510
GRLIDF+++G T+L RCTF
Sbjct: 285 GRLIDFIKRGVTSLSRCTF 303
Score = 67.7 bits (158), Expect = 2e-10
Identities = 30/50 (60%), Positives = 39/50 (78%)
Frame = +3
Query: 468 FLGKGHNQLTAVHILVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSA 617
F+ +G L+ L+LDEADRML+MGFE Q++ II QIRPDRQT+MW+A
Sbjct: 290 FIKRGVTSLSRCTFLILDEADRMLEMGFEVQVQDIIGQIRPDRQTVMWTA 339
Score = 61.7 bits (143), Expect = 2e-08
Identities = 26/58 (44%), Positives = 37/58 (63%)
Frame = +3
Query: 18 HEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGV 191
+E+ V+G E + FEE NFP + +K Y +PTPIQA GWPI + GK++VG+
Sbjct: 139 NEIQVNGCESIKALLTFEECNFPQSILDVIKEQNYIKPTPIQAIGWPIVLQGKDVVGI 196
Score = 33.5 bits (73), Expect = 4.9
Identities = 11/18 (61%), Positives = 18/18 (100%)
Frame = +2
Query: 194 QTGSGKTLAYILPAIVHI 247
+TGSGKT+++++PAI+HI
Sbjct: 198 ETGSGKTISFLIPAIIHI 215
>UniRef50_Q9M2F9 Cluster: DEAD-box ATP-dependent RNA helicase 52;
n=22; Eukaryota|Rep: DEAD-box ATP-dependent RNA helicase
52 - Arabidopsis thaliana (Mouse-ear cress)
Length = 646
Score = 85.8 bits (203), Expect = 9e-16
Identities = 42/89 (47%), Positives = 58/89 (65%)
Frame = +1
Query: 244 HKQPPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLE 423
H + P RG P+A++L+PTRELA QI A F + + V+ +GG P +Q R+LE
Sbjct: 213 HIERPRGVRGVYPLAVILSPTRELACQIHDEARKFSYQTGVKVVVAYGGTPVNQQIRELE 272
Query: 424 RGVEIVIATPGRLIDFLEKGTTNLQRCTF 510
RGV+I++ATPGRL D LE+G +LQ F
Sbjct: 273 RGVDILVATPGRLNDLLERGRVSLQMVRF 301
Score = 58.8 bits (136), Expect = 1e-07
Identities = 32/57 (56%), Positives = 40/57 (70%), Gaps = 4/57 (7%)
Frame = +3
Query: 459 IN*FLGKGHNQLTAVHILVLDEADRMLDMGFEPQIRKIIEQI-RPD---RQTLMWSA 617
+N L +G L V L LDEADRMLDMGFEPQIRKI++Q+ P RQT+++SA
Sbjct: 285 LNDLLERGRVSLQMVRFLALDEADRMLDMGFEPQIRKIVQQMDMPPPGVRQTMLFSA 341
Score = 35.1 bits (77), Expect = 1.6
Identities = 15/54 (27%), Positives = 28/54 (51%)
Frame = +3
Query: 24 VTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLV 185
+ SG V P+ F E + + + ++ Y +PTP+Q PI +G++L+
Sbjct: 134 IETSGDNVPPPVNTFAEIDLGEALNLNIQRCKYVKPTPVQRNAIPILAAGRDLM 187
>UniRef50_Q8H0U8 Cluster: DEAD-box ATP-dependent RNA helicase 42;
n=2; Arabidopsis thaliana|Rep: DEAD-box ATP-dependent
RNA helicase 42 - Arabidopsis thaliana (Mouse-ear cress)
Length = 1166
Score = 85.8 bits (203), Expect = 9e-16
Identities = 45/91 (49%), Positives = 56/91 (61%), Gaps = 3/91 (3%)
Frame = +1
Query: 247 KQPPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLER 426
K PP+ GDGPI LV+APTREL QQI F +R V+GG+ +Q +L+R
Sbjct: 592 KDQPPVEAGDGPIGLVMAPTRELVQQIHSDIRKFSKPLGIRCVPVYGGSGVAQQISELKR 651
Query: 427 GVEIVIATPGRLIDFL--EKG-TTNLQRCTF 510
G EIV+ TPGR+ID L G TNL+R TF
Sbjct: 652 GTEIVVCTPGRMIDILCTSSGKITNLRRVTF 682
Score = 62.5 bits (145), Expect = 9e-09
Identities = 28/42 (66%), Positives = 35/42 (83%)
Frame = +3
Query: 492 LTAVHILVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSA 617
L V LV+DEADRM DMGFEPQI +II+ IRP+RQT+++SA
Sbjct: 677 LRRVTFLVMDEADRMFDMGFEPQITRIIQNIRPERQTVLFSA 718
Score = 50.4 bits (115), Expect = 4e-05
Identities = 21/59 (35%), Positives = 35/59 (59%)
Frame = +3
Query: 21 EVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVLK 197
E+ V G +V PI+++ + + +K + Y++P PIQ Q PI MSG++ +GV K
Sbjct: 516 ELKVHGKDVPRPIKFWHQTGLTSKILDTMKKLNYEKPMPIQTQALPIIMSGRDCIGVAK 574
>UniRef50_A4S107 Cluster: Predicted protein; n=1; Ostreococcus
lucimarinus CCE9901|Rep: Predicted protein -
Ostreococcus lucimarinus CCE9901
Length = 478
Score = 85.4 bits (202), Expect = 1e-15
Identities = 48/107 (44%), Positives = 64/107 (59%), Gaps = 3/107 (2%)
Frame = +1
Query: 199 GFRQNVGLHLASHCAHKQPPPIRRGDGPIALVLAPTRELAQQIQQVAADFGH--TSYVRN 372
G + + L ++ + P+ + +GPIALVLAPTRELA QI A F S R
Sbjct: 102 GSGKTLAFLLPAYAQISRQRPLTKREGPIALVLAPTRELASQIANEAHKFTKFGVSGARC 161
Query: 373 TCVFGGAPKREQARDLERGVEIVIATPGRLIDFL-EKGTTNLQRCTF 510
+FGG KR+Q + L G EIV+ATPGRL+D L K +TNL+R T+
Sbjct: 162 CAIFGGVSKRDQFKKLRAGAEIVVATPGRLVDVLCMKNSTNLRRVTY 208
Score = 56.8 bits (131), Expect = 5e-07
Identities = 27/47 (57%), Positives = 32/47 (68%)
Frame = +3
Query: 477 KGHNQLTAVHILVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSA 617
K L V L LDEADRMLDMGFE +R I + +RPDRQ +M+SA
Sbjct: 198 KNSTNLRRVTYLALDEADRMLDMGFEKIVRSICQAVRPDRQCVMFSA 244
>UniRef50_Q93382 Cluster: Putative uncharacterized protein; n=2;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 811
Score = 84.6 bits (200), Expect = 2e-15
Identities = 44/117 (37%), Positives = 72/117 (61%), Gaps = 2/117 (1%)
Frame = +1
Query: 256 PPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLE-RGV 432
P ++ G+GP+A+++ PTRELA Q+ Q A F + C +GG K EQ+ +L+ G
Sbjct: 331 PDLKAGEGPVAVIVVPTRELAIQVFQEAKKFCKVYNINPICAYGGGSKWEQSNELQNEGA 390
Query: 433 EIVIATPGRLIDFLEKGTTNLQRCTF*FLMRLIVCWIWDLNHKSE-KSLSKYAQTDR 600
E+V+ TPGR+ID ++ G TN R T FL+ ++D+ +++ KS+S + + DR
Sbjct: 391 EMVVCTPGRIIDLVKMGATNFLRTT--FLVFDEADRMFDMGFEAQVKSISDHVRPDR 445
Score = 59.3 bits (137), Expect = 9e-08
Identities = 27/44 (61%), Positives = 32/44 (72%)
Frame = +3
Query: 510 LVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSAYLAQKKXR 641
LV DEADRM DMGFE Q++ I + +RPDRQ LM+SA QK R
Sbjct: 417 LVFDEADRMFDMGFEAQVKSISDHVRPDRQCLMFSATFKQKVER 460
Score = 47.6 bits (108), Expect = 3e-04
Identities = 22/74 (29%), Positives = 40/74 (54%), Gaps = 4/74 (5%)
Frame = +3
Query: 12 NNHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGV 191
N + V G++ P+ F +F + + ++ Y++PTPIQA P A+SG++++G+
Sbjct: 249 NTMNLRVGGLKPPRPVCSFAHFSFDKLLMEAIRKSEYEQPTPIQAMAIPSALSGRDVLGI 308
Query: 192 LK----RVPAKRWP 221
K + A WP
Sbjct: 309 AKTGSGKTAAYLWP 322
Score = 33.5 bits (73), Expect = 4.9
Identities = 14/18 (77%), Positives = 16/18 (88%)
Frame = +2
Query: 194 QTGSGKTLAYILPAIVHI 247
+TGSGKT AY+ PAIVHI
Sbjct: 310 KTGSGKTAAYLWPAIVHI 327
>UniRef50_Q965K2 Cluster: Putative uncharacterized protein; n=2;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 970
Score = 84.2 bits (199), Expect = 3e-15
Identities = 42/88 (47%), Positives = 55/88 (62%), Gaps = 3/88 (3%)
Frame = +1
Query: 256 PPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVE 435
P + GDGPIA++LAPTRELA Q + A F ++ C +GG EQ DL+RG E
Sbjct: 370 PELEEGDGPIAVILAPTRELAMQTYKEANKFAKPLGLKVACTYGGVGISEQIADLKRGAE 429
Query: 436 IVIATPGRLIDFLEKGT---TNLQRCTF 510
IV+ TPGR+ID L + TNL+R T+
Sbjct: 430 IVVCTPGRMIDVLAANSGKVTNLRRVTY 457
Score = 60.9 bits (141), Expect = 3e-08
Identities = 30/48 (62%), Positives = 36/48 (75%)
Frame = +3
Query: 474 GKGHNQLTAVHILVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSA 617
GK N L V LVLDEADRM D GFEPQI K++ IRPD+QT+++SA
Sbjct: 447 GKVTN-LRRVTYLVLDEADRMFDKGFEPQIMKVVNNIRPDKQTVLFSA 493
Score = 43.2 bits (97), Expect = 0.006
Identities = 19/58 (32%), Positives = 33/58 (56%)
Frame = +3
Query: 24 VTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVLK 197
+TV G++ PI+ + + + +K Y +PT IQAQ P MSG++++G+ K
Sbjct: 292 ITVKGIDCPKPIKTWAQCGVNLKMMNVLKKFEYSKPTSIQAQAIPSIMSGRDVIGIAK 349
>UniRef50_A4S294 Cluster: Predicted protein; n=1; Ostreococcus
lucimarinus CCE9901|Rep: Predicted protein -
Ostreococcus lucimarinus CCE9901
Length = 723
Score = 83.8 bits (198), Expect = 4e-15
Identities = 66/200 (33%), Positives = 98/200 (49%), Gaps = 6/200 (3%)
Frame = +3
Query: 36 GVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVLKRVPAKR 215
G +V PI+ + +A + V + ++ G+++P PIQAQ P+ MSG++ +GV K K
Sbjct: 109 GKKVPKPIKTWAQAGLNNRVHELIRRSGFEKPMPIQAQALPVIMSGRDCIGVAKTGSGKT 168
Query: 216 WPTSCQPLCT*TTTAYSER*WSDCFGL--GAYQRVSTTNSASCCRFWTHILCS*HVCVWW 389
P+ G+ G + + T C R+ + S V V+
Sbjct: 169 L-AYILPMLRHINAQEPLASGDGPIGMIMGPTRELVTQIGKDCKRYGKAMGFS-AVSVYG 226
Query: 390 CS*KRASPG-LGEGSRNSHCYSR*IN*FLGKGHNQLT---AVHILVLDEADRMLDMGFEP 557
S A G L G+ C + L G ++T V +VLDEADRM DMGFEP
Sbjct: 227 GSGIAAQIGDLKRGAEIVACTPGRMIDLLTTGSGKITNLRRVTYMVLDEADRMFDMGFEP 286
Query: 558 QIRKIIEQIRPDRQTLMWSA 617
QI +I+ +RPDRQT+M+SA
Sbjct: 287 QITRILANLRPDRQTVMFSA 306
Score = 74.5 bits (175), Expect = 2e-12
Identities = 38/87 (43%), Positives = 51/87 (58%), Gaps = 3/87 (3%)
Frame = +1
Query: 259 PIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEI 438
P+ GDGPI +++ PTREL QI + +G V+GG+ Q DL+RG EI
Sbjct: 184 PLASGDGPIGMIMGPTRELVTQIGKDCKRYGKAMGFSAVSVYGGSGIAAQIGDLKRGAEI 243
Query: 439 VIATPGRLIDFLEKGT---TNLQRCTF 510
V TPGR+ID L G+ TNL+R T+
Sbjct: 244 VACTPGRMIDLLTTGSGKITNLRRVTY 270
Score = 35.5 bits (78), Expect = 1.2
Identities = 15/19 (78%), Positives = 17/19 (89%)
Frame = +2
Query: 194 QTGSGKTLAYILPAIVHIN 250
+TGSGKTLAYILP + HIN
Sbjct: 162 KTGSGKTLAYILPMLRHIN 180
>UniRef50_Q4MYL1 Cluster: ATP-dependent RNA helicase, putative; n=3;
Piroplasmida|Rep: ATP-dependent RNA helicase, putative -
Theileria parva
Length = 707
Score = 83.0 bits (196), Expect = 6e-15
Identities = 41/89 (46%), Positives = 58/89 (65%)
Frame = +1
Query: 256 PPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVE 435
PP+ G GPI L+L+PTREL QI + A + +R ++GGA K Q R+L+ G E
Sbjct: 385 PPVGTG-GPIMLILSPTRELCLQIAEEARPYSRLLNLRLVPIYGGASKFAQVRELQNGAE 443
Query: 436 IVIATPGRLIDFLEKGTTNLQRCTF*FLM 522
I++ATPGRL++FL GT L R ++ F+M
Sbjct: 444 IMVATPGRLLEFLSNGTIKLNRVSY-FVM 471
Score = 75.4 bits (177), Expect = 1e-12
Identities = 36/50 (72%), Positives = 40/50 (80%)
Frame = +3
Query: 468 FLGKGHNQLTAVHILVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSA 617
FL G +L V V+DEADRMLDMGFEPQIRKI+ QIRPDRQTLM+SA
Sbjct: 455 FLSNGTIKLNRVSYFVMDEADRMLDMGFEPQIRKIVGQIRPDRQTLMFSA 504
Score = 49.2 bits (112), Expect = 9e-05
Identities = 20/59 (33%), Positives = 34/59 (57%), Gaps = 1/59 (1%)
Frame = +3
Query: 18 HEVTVSGVE-VHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGV 191
H + + G + P+ F+EA F +Q +K + EPTPIQ GW ++G++++GV
Sbjct: 304 HNIIIEGEHPLPKPVTTFDEAVFNQQIQNIIKESNFTEPTPIQKVGWTSCLTGRDIIGV 362
>UniRef50_Q9BUQ8 Cluster: Probable ATP-dependent RNA helicase DDX23;
n=50; Eumetazoa|Rep: Probable ATP-dependent RNA helicase
DDX23 - Homo sapiens (Human)
Length = 820
Score = 83.0 bits (196), Expect = 6e-15
Identities = 41/78 (52%), Positives = 49/78 (62%)
Frame = +1
Query: 277 GPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPG 456
GP A++LAPTRELAQQI++ FG +R V GG + +Q L G EIVIATPG
Sbjct: 468 GPYAIILAPTRELAQQIEEETIKFGKPLGIRTVAVIGGISREDQGFRLRMGCEIVIATPG 527
Query: 457 RLIDFLEKGTTNLQRCTF 510
RLID LE L RCT+
Sbjct: 528 RLIDVLENRYLVLSRCTY 545
Score = 56.0 bits (129), Expect = 8e-07
Identities = 20/59 (33%), Positives = 40/59 (67%)
Frame = +3
Query: 15 NHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGV 191
++ +T G ++ NPI+ +++++ P ++ + + GYKEPTPIQ Q PI + ++++GV
Sbjct: 376 DYSITTKGGKIPNPIRSWKDSSLPPHILEVIDKCGYKEPTPIQRQAIPIGLQNRDIIGV 434
Score = 44.0 bits (99), Expect = 0.003
Identities = 18/30 (60%), Positives = 24/30 (80%)
Frame = +3
Query: 510 LVLDEADRMLDMGFEPQIRKIIEQIRPDRQ 599
+VLDEADRM+DMGFEP ++KI+E + Q
Sbjct: 546 VVLDEADRMIDMGFEPDVQKILEHMPVSNQ 575
>UniRef50_Q95QN2 Cluster: Putative uncharacterized protein; n=2;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 730
Score = 82.6 bits (195), Expect = 8e-15
Identities = 38/78 (48%), Positives = 51/78 (65%)
Frame = +1
Query: 277 GPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPG 456
GP A+++APTRELAQQI++ FG ++ V GGA + +Q L GVE+VIATPG
Sbjct: 378 GPYAIIMAPTRELAQQIEEETNKFGKLLGIKTVSVIGGASREDQGMKLRMGVEVVIATPG 437
Query: 457 RLIDFLEKGTTNLQRCTF 510
RL+D LE L +CT+
Sbjct: 438 RLLDVLENRYLLLNQCTY 455
Score = 62.1 bits (144), Expect = 1e-08
Identities = 26/56 (46%), Positives = 38/56 (67%)
Frame = +3
Query: 24 VTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGV 191
+++ G V P++ +EEA FPD V Q VK +GY EPTPIQ Q PI + ++++GV
Sbjct: 289 ISIKGGRVPRPLRNWEEAGFPDEVYQAVKEIGYLEPTPIQRQAIPIGLQNRDVIGV 344
Score = 44.4 bits (100), Expect = 0.003
Identities = 22/36 (61%), Positives = 28/36 (77%)
Frame = +3
Query: 486 NQLTAVHILVLDEADRMLDMGFEPQIRKIIEQIRPD 593
NQ T V +LDEADRMLDMGFEP ++K++E + PD
Sbjct: 451 NQCTYV---ILDEADRMLDMGFEPDVQKVLEYM-PD 482
>UniRef50_A6RW79 Cluster: Putative uncharacterized protein; n=1;
Botryotinia fuckeliana B05.10|Rep: Putative
uncharacterized protein - Botryotinia fuckeliana B05.10
Length = 1151
Score = 82.2 bits (194), Expect = 1e-14
Identities = 39/87 (44%), Positives = 55/87 (63%), Gaps = 3/87 (3%)
Frame = +1
Query: 259 PIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEI 438
P++ DGPI L++ PTRELA QI + F +R C +GGA ++Q DL+RG EI
Sbjct: 621 PLKGSDGPIGLIMTPTRELATQIHKECKPFLKAMGLRAVCAYGGAIIKDQIADLKRGAEI 680
Query: 439 VIATPGRLIDFLEKGT---TNLQRCTF 510
++ TPGR+I+ L + TNLQR T+
Sbjct: 681 IVCTPGRMIELLAANSGRVTNLQRVTY 707
Score = 59.7 bits (138), Expect = 7e-08
Identities = 26/42 (61%), Positives = 33/42 (78%)
Frame = +3
Query: 492 LTAVHILVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSA 617
L V +VLDEADRM DMGFEPQ+ K+ IRP+RQT+++SA
Sbjct: 702 LQRVTYVVLDEADRMFDMGFEPQVMKVFNNIRPNRQTILFSA 743
Score = 43.2 bits (97), Expect = 0.006
Identities = 19/58 (32%), Positives = 32/58 (55%)
Frame = +3
Query: 24 VTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVLK 197
+ V+G +V P+Q + + + +GY+ PT IQ Q P MSG++++GV K
Sbjct: 542 IKVAGKDVPKPVQKWSQCGLDVKSLDVITKLGYERPTSIQMQAIPAIMSGRDVIGVAK 599
>UniRef50_Q9NXZ2 Cluster: Probable ATP-dependent RNA helicase DDX43;
n=24; Coelomata|Rep: Probable ATP-dependent RNA helicase
DDX43 - Homo sapiens (Human)
Length = 648
Score = 82.2 bits (194), Expect = 1e-14
Identities = 65/199 (32%), Positives = 97/199 (48%), Gaps = 8/199 (4%)
Frame = +3
Query: 45 VHNPIQYFEEAN--FPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVLKRVPAKRW 218
+ NP F++A +P+ V + +K G+++PTPIQ+Q WPI + G +L+GV + K
Sbjct: 236 IPNPTCTFDDAFQCYPE-VMENIKKAGFQKPTPIQSQAWPIVLQGIDLIGVAQTGTGK-- 292
Query: 219 PTSCQPL-----CT*TTTAYSER*WSDCFGLGAYQRVSTTNSASCCRFWTHILCS*HVCV 383
T C + + +R L + ++ CC++ L S VCV
Sbjct: 293 -TLCYLMPGFIHLVLQPSLKGQRNRPGMLVLTPTRELALQVEGECCKYSYKGLRS--VCV 349
Query: 384 WWCS*KRAS-PGLGEGSRNSHCYSR*IN*FLGKGHNQLTAVHILVLDEADRMLDMGFEPQ 560
+ + L +G +N L + LVLDEAD+MLDMGFEPQ
Sbjct: 350 YGGGNRDEQIEELKKGVDIIIATPGRLNDLQMSNFVNLKNITYLVLDEADKMLDMGFEPQ 409
Query: 561 IRKIIEQIRPDRQTLMWSA 617
I KI+ +RPDRQT+M SA
Sbjct: 410 IMKILLDVRPDRQTVMTSA 428
Score = 68.9 bits (161), Expect = 1e-10
Identities = 35/87 (40%), Positives = 52/87 (59%)
Frame = +1
Query: 250 QPPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERG 429
QP + + P LVL PTRELA Q++ + + +R+ CV+GG + EQ +L++G
Sbjct: 307 QPSLKGQRNRPGMLVLTPTRELALQVEGECCKYSYKG-LRSVCVYGGGNRDEQIEELKKG 365
Query: 430 VEIVIATPGRLIDFLEKGTTNLQRCTF 510
V+I+IATPGRL D NL+ T+
Sbjct: 366 VDIIIATPGRLNDLQMSNFVNLKNITY 392
>UniRef50_UPI00006CDDA3 Cluster: CLN3 protein; n=1; Tetrahymena
thermophila SB210|Rep: CLN3 protein - Tetrahymena
thermophila SB210
Length = 1138
Score = 81.8 bits (193), Expect = 1e-14
Identities = 37/83 (44%), Positives = 55/83 (66%)
Frame = +1
Query: 262 IRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIV 441
+ + +GPI L+LAPTREL QQ+ + + + + GG K EQ + L+ GVEI+
Sbjct: 130 LEKNEGPIGLILAPTRELCQQVYTESKRYAKIYNISVGALLGGENKHEQWKMLKAGVEIL 189
Query: 442 IATPGRLIDFLEKGTTNLQRCTF 510
IATPGRL++ ++K TNL+RCT+
Sbjct: 190 IATPGRLMEMIQKKATNLRRCTY 212
Score = 62.1 bits (144), Expect = 1e-08
Identities = 29/47 (61%), Positives = 40/47 (85%)
Frame = +3
Query: 510 LVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSAYLAQKKXRNLL 650
+V+DEAD+M MGFE QIR I++QIRPDRQTL+++A L +KK +NL+
Sbjct: 213 VVIDEADKMFSMGFEKQIRSIMQQIRPDRQTLLFTATL-KKKIQNLV 258
Score = 50.0 bits (114), Expect = 5e-05
Identities = 22/59 (37%), Positives = 35/59 (59%)
Frame = +3
Query: 21 EVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVLK 197
E+ VSGV PI F F + + + + +G+++PT IQ Q P +SG+++VGV K
Sbjct: 49 EIKVSGVRPPKPIVSFGHLGFDEELMRQITKLGFEKPTQIQCQALPCGLSGRDIVGVAK 107
>UniRef50_A0BDD2 Cluster: Chromosome undetermined scaffold_100,
whole genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_100,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 737
Score = 81.8 bits (193), Expect = 1e-14
Identities = 36/83 (43%), Positives = 53/83 (63%)
Frame = +1
Query: 262 IRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIV 441
+ + +GPI LV+ PTREL QQ+ + + + + GG K Q ++L GV+I+
Sbjct: 256 VEKKEGPIGLVVVPTRELGQQVYLETKKYAQLFQISVSALLGGENKHHQWKELRAGVDII 315
Query: 442 IATPGRLIDFLEKGTTNLQRCTF 510
IATPGRLI+ ++K TNLQRCT+
Sbjct: 316 IATPGRLIEMVKKKATNLQRCTY 338
Score = 54.8 bits (126), Expect = 2e-06
Identities = 27/46 (58%), Positives = 36/46 (78%)
Frame = +3
Query: 510 LVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSAYLAQKKXRNL 647
+VLDEAD+M +GFE QIR II QIRPD+Q L+++A + +KK R L
Sbjct: 339 IVLDEADQMFSLGFEYQIRSIIGQIRPDKQILLFTATM-KKKIRQL 383
Score = 40.7 bits (91), Expect = 0.032
Identities = 18/60 (30%), Positives = 31/60 (51%)
Frame = +3
Query: 18 HEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVLK 197
+++ V G V PI F + + +++PT IQ+Q P +SG+N++GV K
Sbjct: 174 YQIHVKGNNVPKPIISFGHLQLDQKLVNKIVAQNFEKPTAIQSQALPCVLSGRNVIGVAK 233
Score = 33.5 bits (73), Expect = 4.9
Identities = 12/22 (54%), Positives = 18/22 (81%)
Frame = +2
Query: 194 QTGSGKTLAYILPAIVHINNHR 259
+TGSGKT+AY+ P +VH++ R
Sbjct: 233 KTGSGKTIAYVWPMLVHVSAQR 254
>UniRef50_A2ED04 Cluster: DEAD/DEAH box helicase family protein;
n=1; Trichomonas vaginalis G3|Rep: DEAD/DEAH box
helicase family protein - Trichomonas vaginalis G3
Length = 521
Score = 81.4 bits (192), Expect = 2e-14
Identities = 41/83 (49%), Positives = 49/83 (59%)
Frame = +1
Query: 262 IRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIV 441
I DGPI LVL+PTRELA Q +VAA F ++ C++GG + Q L EIV
Sbjct: 153 ISENDGPIVLVLSPTRELALQTDEVAAQFCVKMGYKHVCIYGGEDRHRQINKLRFHPEIV 212
Query: 442 IATPGRLIDFLEKGTTNLQRCTF 510
ATPGRLIDFL+ G N R F
Sbjct: 213 TATPGRLIDFLQSGVFNPNRANF 235
Score = 60.1 bits (139), Expect = 5e-08
Identities = 30/50 (60%), Positives = 34/50 (68%)
Frame = +3
Query: 468 FLGKGHNQLTAVHILVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSA 617
FL G + LVLDEADRMLDMGFEPQIR II + DR+T M+SA
Sbjct: 222 FLQSGVFNPNRANFLVLDEADRMLDMGFEPQIRAIIASLTKDRETFMFSA 271
Score = 43.2 bits (97), Expect = 0.006
Identities = 17/44 (38%), Positives = 26/44 (59%)
Frame = +3
Query: 66 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVLK 197
FEE N P + + +K + PTPIQ+ PI + G ++VG+ K
Sbjct: 87 FEELNLPQEIMEVIKENNWTNPTPIQSLSIPIGLKGNDMVGIAK 130
Score = 33.1 bits (72), Expect = 6.5
Identities = 12/26 (46%), Positives = 20/26 (76%)
Frame = +2
Query: 194 QTGSGKTLAYILPAIVHINNHRLFGE 271
+TGSGKT ++++PA++HI+ R E
Sbjct: 130 KTGSGKTASFLIPALMHISAQRKISE 155
>UniRef50_Q9SF41 Cluster: DEAD-box ATP-dependent RNA helicase 45;
n=15; Eukaryota|Rep: DEAD-box ATP-dependent RNA helicase
45 - Arabidopsis thaliana (Mouse-ear cress)
Length = 989
Score = 81.4 bits (192), Expect = 2e-14
Identities = 43/91 (47%), Positives = 55/91 (60%), Gaps = 3/91 (3%)
Frame = +1
Query: 247 KQPPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLER 426
K PP+ GDGPI LV+APTREL QQI F + V+GG+ +Q +L+R
Sbjct: 459 KDQPPVEAGDGPIGLVMAPTRELVQQIYSDIRKFSKALGIICVPVYGGSGVAQQISELKR 518
Query: 427 GVEIVIATPGRLIDFL--EKG-TTNLQRCTF 510
G EIV+ TPGR+ID L G TNL+R T+
Sbjct: 519 GTEIVVCTPGRMIDILCTSSGKITNLRRVTY 549
Score = 63.3 bits (147), Expect = 5e-09
Identities = 28/42 (66%), Positives = 35/42 (83%)
Frame = +3
Query: 492 LTAVHILVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSA 617
L V LV+DEADRM DMGFEPQI +I++ IRPDRQT+++SA
Sbjct: 544 LRRVTYLVMDEADRMFDMGFEPQITRIVQNIRPDRQTVLFSA 585
Score = 53.6 bits (123), Expect = 4e-06
Identities = 23/59 (38%), Positives = 36/59 (61%)
Frame = +3
Query: 21 EVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVLK 197
E+ V G +V PIQ++ + + +K + Y++P PIQAQ PI MSG++ +GV K
Sbjct: 383 ELKVHGKDVPRPIQFWHQTGLTSKILDTLKKLNYEKPMPIQAQALPIIMSGRDCIGVAK 441
>UniRef50_A7P8T9 Cluster: Chromosome chr3 scaffold_8, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr3 scaffold_8, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 971
Score = 80.6 bits (190), Expect = 3e-14
Identities = 41/91 (45%), Positives = 55/91 (60%), Gaps = 3/91 (3%)
Frame = +1
Query: 247 KQPPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLER 426
K PP+ GDGPI L++APTREL QQI F + V+GG+ +Q +L+R
Sbjct: 547 KDQPPVMPGDGPIGLIMAPTRELVQQIHSDIKKFAKVVGISCVPVYGGSGVAQQISELKR 606
Query: 427 GVEIVIATPGRLIDFL-EKG--TTNLQRCTF 510
G E+V+ TPGR+ID L G TNL+R T+
Sbjct: 607 GAEVVVCTPGRMIDILCTSGGKITNLRRVTY 637
Score = 48.8 bits (111), Expect = 1e-04
Identities = 19/59 (32%), Positives = 34/59 (57%)
Frame = +3
Query: 21 EVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVLK 197
E+ + G +V P++ + + + +K + Y+ P PIQAQ PI MSG++ +G+ K
Sbjct: 471 ELKIHGKDVPKPVKTWHQTGLTTKILDTIKKLNYERPMPIQAQALPIIMSGRDCIGIAK 529
>UniRef50_A5KB15 Cluster: ATP-dependent RNA helicase, putative; n=1;
Plasmodium vivax|Rep: ATP-dependent RNA helicase,
putative - Plasmodium vivax
Length = 1341
Score = 80.6 bits (190), Expect = 3e-14
Identities = 42/98 (42%), Positives = 59/98 (60%), Gaps = 3/98 (3%)
Frame = +1
Query: 226 LASHCAHKQPPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKRE 405
L H H+ PP+R DGPIA++L PTREL++Q++ A + +R V+GG+
Sbjct: 727 LIRHVLHQ--PPLRNNDGPIAIILTPTRELSKQVKSEARPYCQAVNLRILAVYGGSNIGT 784
Query: 406 QARDLERGVEIVIATPGRLIDFLEKG---TTNLQRCTF 510
Q L+RGVEI++ TPGR+ID L TNL R +F
Sbjct: 785 QLNTLKRGVEILVGTPGRIIDILTISNCKVTNLNRVSF 822
Score = 50.8 bits (116), Expect = 3e-05
Identities = 24/42 (57%), Positives = 29/42 (69%)
Frame = +3
Query: 492 LTAVHILVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSA 617
L V +VLDEADR+LD+GFE QI I+ R D+QT M SA
Sbjct: 817 LNRVSFVVLDEADRLLDLGFESQIHNILNNCRKDKQTAMISA 858
>UniRef50_P24784 Cluster: ATP-dependent RNA helicase DBP1; n=103;
Eukaryota|Rep: ATP-dependent RNA helicase DBP1 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 617
Score = 80.6 bits (190), Expect = 3e-14
Identities = 39/72 (54%), Positives = 52/72 (72%)
Frame = +1
Query: 280 PIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGR 459
P ALVLAPTRELA QI + A F + S+VR V+GGAP Q R+++RG ++++ATPGR
Sbjct: 238 PSALVLAPTRELATQIFEEARKFTYRSWVRPCVVYGGAPIGNQMREVDRGCDLLVATPGR 297
Query: 460 LIDFLEKGTTNL 495
L D LE+G +L
Sbjct: 298 LNDLLERGKVSL 309
Score = 58.4 bits (135), Expect = 2e-07
Identities = 32/57 (56%), Positives = 39/57 (68%), Gaps = 4/57 (7%)
Frame = +3
Query: 459 IN*FLGKGHNQLTAVHILVLDEADRMLDMGFEPQIRKIIEQIR----PDRQTLMWSA 617
+N L +G L + LVLDEADRMLDMGFEPQIR I+E+ +RQTLM+SA
Sbjct: 298 LNDLLERGKVSLANIKYLVLDEADRMLDMGFEPQIRHIVEECDMPSVENRQTLMFSA 354
Score = 38.3 bits (85), Expect = 0.17
Identities = 17/58 (29%), Positives = 29/58 (50%)
Frame = +3
Query: 12 NNHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLV 185
+N V SG +V PI F + + + +K + +PTP+Q PI G++L+
Sbjct: 138 DNIPVDASGKDVPEPILDFSSPPLDELLMENIKLASFTKPTPVQKYSIPIVTKGRDLM 195
>UniRef50_O22907 Cluster: DEAD-box ATP-dependent RNA helicase 24;
n=7; Magnoliophyta|Rep: DEAD-box ATP-dependent RNA
helicase 24 - Arabidopsis thaliana (Mouse-ear cress)
Length = 760
Score = 80.2 bits (189), Expect = 4e-14
Identities = 38/85 (44%), Positives = 54/85 (63%)
Frame = +1
Query: 256 PPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVE 435
P ++R +GPI ++ APTRELA QI A F +R + V+GG K EQ ++L+ G E
Sbjct: 294 PELQRDEGPIGVICAPTRELAHQIFLEAKKFSKAYGLRVSAVYGGMSKHEQFKELKAGCE 353
Query: 436 IVIATPGRLIDFLEKGTTNLQRCTF 510
IV+ATPGRLID L+ + R ++
Sbjct: 354 IVVATPGRLIDMLKMKALTMMRASY 378
Score = 65.3 bits (152), Expect = 1e-09
Identities = 29/41 (70%), Positives = 35/41 (85%)
Frame = +3
Query: 510 LVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSAYLAQK 632
LVLDEADRM D+GFEPQ+R I+ QIRPDRQTL++SA + K
Sbjct: 379 LVLDEADRMFDLGFEPQVRSIVGQIRPDRQTLLFSATMPWK 419
Score = 60.5 bits (140), Expect = 4e-08
Identities = 22/58 (37%), Positives = 37/58 (63%)
Frame = +3
Query: 24 VTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVLK 197
+ VSG +VH P++ FE+ F + +K Y++PT IQ Q PI +SG++++G+ K
Sbjct: 216 IRVSGFDVHRPVKTFEDCGFSSQIMSAIKKQAYEKPTAIQCQALPIVLSGRDVIGIAK 273
Score = 32.7 bits (71), Expect = 8.6
Identities = 13/18 (72%), Positives = 16/18 (88%)
Frame = +2
Query: 194 QTGSGKTLAYILPAIVHI 247
+TGSGKT A++LP IVHI
Sbjct: 273 KTGSGKTAAFVLPMIVHI 290
>UniRef50_UPI00015609AE Cluster: PREDICTED: similar to DEAD
(Asp-Glu-Ala-Asp) box polypeptide 53; n=2; Equus
caballus|Rep: PREDICTED: similar to DEAD
(Asp-Glu-Ala-Asp) box polypeptide 53 - Equus caballus
Length = 711
Score = 79.8 bits (188), Expect = 6e-14
Identities = 63/196 (32%), Positives = 96/196 (48%), Gaps = 5/196 (2%)
Frame = +3
Query: 45 VHNPIQYFEEA--NFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVLKRVPAKRW 218
+ NP FE+A ++P+ V + +K G++ PTPIQ+Q WPI + G +L+GV + K
Sbjct: 299 IPNPTCKFEDAFEHYPE-VLKSIKKAGFQRPTPIQSQAWPIVLQGMDLIGVAQTGTGKTL 357
Query: 219 PTSCQPLCT*TTTAYS--ER*WSDCFGLGAYQRVSTTNSASCCRFWTHILCS*HVCVWWC 392
+ S ER L + ++ A C ++ L S VCV+
Sbjct: 358 SYLIPGFIHLDSQPISREERNGPGMLVLTPTRELALQVEAECSKYSYKGLKS--VCVYGG 415
Query: 393 S*KRAS-PGLGEGSRNSHCYSR*IN*FLGKGHNQLTAVHILVLDEADRMLDMGFEPQIRK 569
++ + +G +N L ++ LVLDEAD+MLD+GFE QI K
Sbjct: 416 GNRKEQIQHITKGVDIIIATPGRLNDLQMNKCVNLRSITYLVLDEADKMLDLGFEGQITK 475
Query: 570 IIEQIRPDRQTLMWSA 617
I+ +RPDRQT+M SA
Sbjct: 476 ILLDVRPDRQTVMTSA 491
Score = 71.3 bits (167), Expect = 2e-11
Identities = 36/91 (39%), Positives = 55/91 (60%), Gaps = 2/91 (2%)
Frame = +1
Query: 244 HKQPPPIRRGD--GPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARD 417
H PI R + GP LVL PTRELA Q++ + + + +++ CV+GG ++EQ +
Sbjct: 366 HLDSQPISREERNGPGMLVLTPTRELALQVEAECSKYSYKG-LKSVCVYGGGNRKEQIQH 424
Query: 418 LERGVEIVIATPGRLIDFLEKGTTNLQRCTF 510
+ +GV+I+IATPGRL D NL+ T+
Sbjct: 425 ITKGVDIIIATPGRLNDLQMNKCVNLRSITY 455
Score = 33.1 bits (72), Expect = 6.5
Identities = 11/26 (42%), Positives = 20/26 (76%)
Frame = +2
Query: 194 QTGSGKTLAYILPAIVHINNHRLFGE 271
QTG+GKTL+Y++P +H+++ + E
Sbjct: 350 QTGTGKTLSYLIPGFIHLDSQPISRE 375
>UniRef50_Q9VXW2 Cluster: CG6227-PA; n=11; Coelomata|Rep: CG6227-PA
- Drosophila melanogaster (Fruit fly)
Length = 1224
Score = 79.8 bits (188), Expect = 6e-14
Identities = 39/88 (44%), Positives = 55/88 (62%), Gaps = 3/88 (3%)
Frame = +1
Query: 256 PPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVE 435
P + GDG IA+++APTREL QI + F + +R CV+GG EQ +L+RG E
Sbjct: 576 PSMEDGDGAIAIIMAPTRELCMQIGKDIRKFSKSLGLRPVCVYGGTGISEQIAELKRGAE 635
Query: 436 IVIATPGRLIDFLEKGT---TNLQRCTF 510
I++ TPGR+ID L + TNL+R T+
Sbjct: 636 IIVCTPGRMIDMLAANSGRVTNLRRVTY 663
Score = 63.7 bits (148), Expect = 4e-09
Identities = 28/42 (66%), Positives = 35/42 (83%)
Frame = +3
Query: 492 LTAVHILVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSA 617
L V +VLDEADRM DMGFEPQ+ +II+ +RPDRQT+M+SA
Sbjct: 658 LRRVTYVVLDEADRMFDMGFEPQVMRIIDNVRPDRQTVMFSA 699
Score = 43.6 bits (98), Expect = 0.005
Identities = 19/64 (29%), Positives = 35/64 (54%)
Frame = +3
Query: 6 RGNNHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLV 185
R + + V G PI+ + + + ++ +G+++PTPIQ Q P MSG++L+
Sbjct: 492 RSDLEGIQVKGKGCPKPIKTWAQCGVSKKEMEVLRRLGFEKPTPIQCQAIPAIMSGRDLI 551
Query: 186 GVLK 197
G+ K
Sbjct: 552 GIAK 555
>UniRef50_Q869K2 Cluster: Similar to Dictyostelium discoideum (Slime
mold). Putative RNA helicase; n=3; Dictyostelium
discoideum|Rep: Similar to Dictyostelium discoideum
(Slime mold). Putative RNA helicase - Dictyostelium
discoideum (Slime mold)
Length = 1151
Score = 79.8 bits (188), Expect = 6e-14
Identities = 41/88 (46%), Positives = 54/88 (61%), Gaps = 3/88 (3%)
Frame = +1
Query: 256 PPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVE 435
P G+G IAL+++PTRELA QI F +R CV+GGA EQ +L+RG +
Sbjct: 575 PKSAPGEGMIALIMSPTRELALQIHVECKKFSKVLGLRTACVYGGASISEQIAELKRGAD 634
Query: 436 IVIATPGRLIDFL---EKGTTNLQRCTF 510
IV+ TPGR+ID L + TNL+R TF
Sbjct: 635 IVVCTPGRMIDILCANNRRITNLRRVTF 662
Score = 62.1 bits (144), Expect = 1e-08
Identities = 30/47 (63%), Positives = 34/47 (72%)
Frame = +3
Query: 492 LTAVHILVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSAYLAQK 632
L V LVLDEADRM DMGF PQI I++ IRPDRQT+M+SA K
Sbjct: 657 LRRVTFLVLDEADRMFDMGFGPQINCIVDSIRPDRQTIMFSATFPPK 703
Score = 44.4 bits (100), Expect = 0.003
Identities = 20/58 (34%), Positives = 35/58 (60%)
Frame = +3
Query: 24 VTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVLK 197
V ++G + PIQ + +A + V +K Y++PT IQAQ P M+G++L+G+ +
Sbjct: 497 VKITGKDCPKPIQSWAQAGLTEKVHLLLKKFQYEKPTSIQAQTIPAIMNGRDLIGIAR 554
>UniRef50_Q4UBP8 Cluster: RNA helicase, putative; n=4;
Eukaryota|Rep: RNA helicase, putative - Theileria
annulata
Length = 976
Score = 79.8 bits (188), Expect = 6e-14
Identities = 44/88 (50%), Positives = 54/88 (61%), Gaps = 3/88 (3%)
Frame = +1
Query: 256 PPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVE 435
P +R DG I LV+APTREL QI ++ F ++ ++GGA EQ L+RG E
Sbjct: 434 PSLRENDGMIVLVIAPTRELVIQISNESSKFSRAVGLKTLAIYGGAGIGEQLNALKRGAE 493
Query: 436 IVIATPGRLIDF--LEKG-TTNLQRCTF 510
IVI TPGRLID L KG TNL+R TF
Sbjct: 494 IVIGTPGRLIDVLTLSKGKVTNLRRVTF 521
Score = 59.7 bits (138), Expect = 7e-08
Identities = 31/50 (62%), Positives = 34/50 (68%), Gaps = 1/50 (2%)
Frame = +3
Query: 471 LGKGH-NQLTAVHILVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSA 617
L KG L V LVLDEADRM DMGF PQI I+ IRPDRQT ++SA
Sbjct: 508 LSKGKVTNLRRVTFLVLDEADRMFDMGFAPQISAIVGNIRPDRQTALFSA 557
Score = 41.1 bits (92), Expect = 0.024
Identities = 19/62 (30%), Positives = 32/62 (51%)
Frame = +3
Query: 6 RGNNHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLV 185
R N + V G + PI F + PD + + ++ Y+ P PIQ Q P M G++++
Sbjct: 350 RRANGNIRVYGKKCPRPISSFSQCGLPDPILKILEKREYERPFPIQMQCIPALMCGRDVI 409
Query: 186 GV 191
G+
Sbjct: 410 GI 411
>UniRef50_UPI00004994C0 Cluster: DEAD/DEAH box helicase; n=2;
Entamoeba histolytica HM-1:IMSS|Rep: DEAD/DEAH box
helicase - Entamoeba histolytica HM-1:IMSS
Length = 722
Score = 79.4 bits (187), Expect = 8e-14
Identities = 41/87 (47%), Positives = 52/87 (59%), Gaps = 3/87 (3%)
Frame = +1
Query: 259 PIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEI 438
P+ +G+GPI +V AP RELA+QI FG +R+ VFGG Q L+RG EI
Sbjct: 207 PLSKGEGPIGIVFAPIRELAEQINTEINKFGKYLNIRSVAVFGGTGISNQIGALKRGTEI 266
Query: 439 VIATPGRLIDFLEKGT---TNLQRCTF 510
V+ TPGR+ID L TNL+R TF
Sbjct: 267 VVCTPGRMIDILVTNNGRITNLRRVTF 293
Score = 60.1 bits (139), Expect = 5e-08
Identities = 28/42 (66%), Positives = 34/42 (80%)
Frame = +3
Query: 492 LTAVHILVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSA 617
L V +VLDEADRM DMGF PQI++IIE IRPD+Q +M+SA
Sbjct: 288 LRRVTFVVLDEADRMFDMGFGPQIKRIIEGIRPDKQIVMFSA 329
Score = 36.3 bits (80), Expect = 0.70
Identities = 15/52 (28%), Positives = 26/52 (50%)
Frame = +3
Query: 30 VSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLV 185
V G PI+ + E +K + Y++P+P+Q Q P+ MSG + +
Sbjct: 130 VKGKNCPKPIRTWSECGINPITMDVIKALKYEKPSPVQRQAIPVIMSGYDAI 181
>UniRef50_P93008 Cluster: DEAD-box ATP-dependent RNA helicase 21;
n=8; Viridiplantae|Rep: DEAD-box ATP-dependent RNA
helicase 21 - Arabidopsis thaliana (Mouse-ear cress)
Length = 733
Score = 79.0 bits (186), Expect = 1e-13
Identities = 39/79 (49%), Positives = 50/79 (63%)
Frame = +1
Query: 274 DGPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATP 453
+GP A+V+APTRELAQQI++ F H R T + GG EQ + +G EIVIATP
Sbjct: 388 EGPYAVVMAPTRELAQQIEEETVKFAHYLGFRVTSIVGGQSIEEQGLKITQGCEIVIATP 447
Query: 454 GRLIDFLEKGTTNLQRCTF 510
GRLID LE+ L +C +
Sbjct: 448 GRLIDCLERRYAVLNQCNY 466
Score = 40.7 bits (91), Expect = 0.032
Identities = 16/29 (55%), Positives = 23/29 (79%)
Frame = +3
Query: 492 LTAVHILVLDEADRMLDMGFEPQIRKIIE 578
L + +VLDEADRM+DMGFEPQ+ +++
Sbjct: 461 LNQCNYVVLDEADRMIDMGFEPQVAGVLD 489
Score = 40.3 bits (90), Expect = 0.043
Identities = 14/56 (25%), Positives = 33/56 (58%)
Frame = +3
Query: 24 VTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGV 191
++ G + P++ +EE+ + + V+ GYK+P+PIQ P+ + ++++G+
Sbjct: 301 ISYKGSRIPRPMRSWEESKLTSELLKAVERAGYKKPSPIQMAAIPLGLQQRDVIGI 356
>UniRef50_Q1DMX8 Cluster: Pre-mRNA-splicing ATP-dependent RNA
helicase PRP28; n=16; Pezizomycotina|Rep:
Pre-mRNA-splicing ATP-dependent RNA helicase PRP28 -
Coccidioides immitis
Length = 817
Score = 76.6 bits (180), Expect(2) = 1e-13
Identities = 37/82 (45%), Positives = 50/82 (60%)
Frame = +1
Query: 265 RRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVI 444
R+ DGP A++LAPTRELAQQI+ A F + + GG EQ+ L G EI+I
Sbjct: 451 RKSDGPYAIILAPTRELAQQIENEARKFCNPLGFNVVSIVGGHSLEEQSFSLRNGAEIII 510
Query: 445 ATPGRLIDFLEKGTTNLQRCTF 510
ATPGRL+D +E+ L +C +
Sbjct: 511 ATPGRLVDCIERRILVLSQCCY 532
Score = 46.4 bits (105), Expect = 7e-04
Identities = 18/56 (32%), Positives = 35/56 (62%)
Frame = +3
Query: 24 VTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGV 191
++ G + NP++ + E+ P + + + +GYK+P+PIQ PIA+ ++L+GV
Sbjct: 365 ISTKGGSIPNPMRSWGESGLPKRLLEIIDKVGYKDPSPIQRAAIPIALQNRDLIGV 420
Score = 35.9 bits (79), Expect = 0.92
Identities = 12/25 (48%), Positives = 21/25 (84%)
Frame = +3
Query: 510 LVLDEADRMLDMGFEPQIRKIIEQI 584
+++DEADRM+D+GFE + KI++ +
Sbjct: 533 VIMDEADRMIDLGFEEPVNKILDAL 557
Score = 22.6 bits (46), Expect(2) = 1e-13
Identities = 10/24 (41%), Positives = 13/24 (54%)
Frame = +1
Query: 220 LHLASHCAHKQPPPIRRGDGPIAL 291
L + +K P PI+R PIAL
Sbjct: 389 LEIIDKVGYKDPSPIQRAAIPIAL 412
>UniRef50_Q8I0W7 Cluster: Snrnp protein, putative; n=6;
Plasmodium|Rep: Snrnp protein, putative - Plasmodium
falciparum (isolate 3D7)
Length = 1123
Score = 78.6 bits (185), Expect = 1e-13
Identities = 45/91 (49%), Positives = 52/91 (57%), Gaps = 3/91 (3%)
Frame = +1
Query: 247 KQPPPIR---RGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARD 417
KQ PP+ DGP ALV+AP+RELA QI + F R V GG QA +
Sbjct: 761 KQLPPLTYETSQDGPYALVIAPSRELAIQIYEETNKFASYCSCRTVAVVGGRNAEAQAFE 820
Query: 418 LERGVEIVIATPGRLIDFLEKGTTNLQRCTF 510
L RGVEIVI TPGRL D LEK T L +C +
Sbjct: 821 LRRGVEIVIGTPGRLQDCLEKAYTVLNQCNY 851
Score = 49.2 bits (112), Expect = 9e-05
Identities = 21/59 (35%), Positives = 39/59 (66%)
Frame = +3
Query: 15 NHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGV 191
++E+ + G V PI+ +EE+N + + + +K Y++PTPIQ Q PIA+ ++L+G+
Sbjct: 683 DNEIYIKGGVVPPPIRKWEESNLSNDLLKAIKKAKYEKPTPIQMQAIPIALEMRDLIGI 741
Score = 40.3 bits (90), Expect = 0.043
Identities = 17/38 (44%), Positives = 26/38 (68%)
Frame = +3
Query: 471 LGKGHNQLTAVHILVLDEADRMLDMGFEPQIRKIIEQI 584
L K + L + ++LDEADRM+DMGFE + I+++I
Sbjct: 839 LEKAYTVLNQCNYVILDEADRMMDMGFEDTVHYILDKI 876
>UniRef50_Q012E3 Cluster: DEAD-box protein abstrakt; n=1;
Ostreococcus tauri|Rep: DEAD-box protein abstrakt -
Ostreococcus tauri
Length = 1030
Score = 78.2 bits (184), Expect = 2e-13
Identities = 62/200 (31%), Positives = 96/200 (48%), Gaps = 6/200 (3%)
Frame = +3
Query: 36 GVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVLKRVPAKR 215
G +V PI+ + A + + ++ G+++P PIQAQ P+ MSG++ +G+ K K
Sbjct: 322 GKKVPKPIKTWAHAGLSGRIHELIRRCGFEKPMPIQAQALPVIMSGRDCIGIAKTGSGKT 381
Query: 216 WPTSCQPLCT*TTTAYSER*WSDCFG--LGAYQRVSTTNSASCCRFWTHILCS*HVCVWW 389
P+ + G +G + + T R+ + + V V+
Sbjct: 382 L-AYILPMLRHINAQEPLKNGDGPIGMIMGPTRELVTQIGKEAKRYGKALGFN-AVSVYG 439
Query: 390 CS*KRASPG-LGEGSRNSHCYSR*IN*FLGKGHNQLT---AVHILVLDEADRMLDMGFEP 557
S A G L G+ C + L G ++T V +VLDEADRM DMGFEP
Sbjct: 440 GSGIAAQIGELKRGAEIVACTPGRMIDILTTGGGKITNLRRVTYIVLDEADRMFDMGFEP 499
Query: 558 QIRKIIEQIRPDRQTLMWSA 617
QI +I+ +RPDRQT+M+SA
Sbjct: 500 QITRILANLRPDRQTVMFSA 519
Score = 75.8 bits (178), Expect = 9e-13
Identities = 38/87 (43%), Positives = 52/87 (59%), Gaps = 3/87 (3%)
Frame = +1
Query: 259 PIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEI 438
P++ GDGPI +++ PTREL QI + A +G V+GG+ Q +L+RG EI
Sbjct: 397 PLKNGDGPIGMIMGPTRELVTQIGKEAKRYGKALGFNAVSVYGGSGIAAQIGELKRGAEI 456
Query: 439 VIATPGRLIDFLEKG---TTNLQRCTF 510
V TPGR+ID L G TNL+R T+
Sbjct: 457 VACTPGRMIDILTTGGGKITNLRRVTY 483
Score = 35.5 bits (78), Expect = 1.2
Identities = 15/19 (78%), Positives = 17/19 (89%)
Frame = +2
Query: 194 QTGSGKTLAYILPAIVHIN 250
+TGSGKTLAYILP + HIN
Sbjct: 375 KTGSGKTLAYILPMLRHIN 393
>UniRef50_Q1AG34 Cluster: Ded1-like DEAD-box RNA helicase; n=1;
Chironomus tentans|Rep: Ded1-like DEAD-box RNA helicase
- Chironomus tentans (Midge)
Length = 776
Score = 78.2 bits (184), Expect = 2e-13
Identities = 38/85 (44%), Positives = 52/85 (61%)
Frame = +1
Query: 256 PPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVE 435
P RR P+ LVLAPTRELA QI + A F + S +R ++GG EQ R+L+RG
Sbjct: 343 PYQRRKQYPLGLVLAPTRELATQIYEEAKKFSYRSRMRPAVLYGGNNTSEQMRELDRGCH 402
Query: 436 IVIATPGRLIDFLEKGTTNLQRCTF 510
+++ATPGRL D + +G L+ F
Sbjct: 403 LIVATPGRLDDIINRGKIGLENLRF 427
Score = 55.2 bits (127), Expect = 1e-06
Identities = 32/53 (60%), Positives = 37/53 (69%), Gaps = 4/53 (7%)
Frame = +3
Query: 471 LGKGHNQLTAVHILVLDEADRMLDMGFEPQIRKIIE--QIRP--DRQTLMWSA 617
+ +G L + LVLDEADRMLDMGFEPQIR IIE + P RQTLM+SA
Sbjct: 415 INRGKIGLENLRFLVLDEADRMLDMGFEPQIRHIIENRDMPPTGQRQTLMFSA 467
Score = 38.7 bits (86), Expect = 0.13
Identities = 16/54 (29%), Positives = 30/54 (55%)
Frame = +3
Query: 24 VTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLV 185
V +G +V I F++ + ++ +K Y +PTP+Q PI +SG++L+
Sbjct: 255 VEATGQQVPEHITSFDDIKLTEIIRTNIKMARYDKPTPVQKYAIPIILSGRDLM 308
>UniRef50_UPI00006CF9CE Cluster: DEAD/DEAH box helicase family
protein; n=1; Tetrahymena thermophila SB210|Rep:
DEAD/DEAH box helicase family protein - Tetrahymena
thermophila SB210
Length = 1357
Score = 77.8 bits (183), Expect = 2e-13
Identities = 43/86 (50%), Positives = 51/86 (59%), Gaps = 3/86 (3%)
Frame = +1
Query: 259 PIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEI 438
P++ GDGPI L+L PTRELA QI A F VFGG + Q +L+RG EI
Sbjct: 774 PLQEGDGPIGLILVPTRELATQIYLEAKPFLKAYKYEIVAVFGGTGIKGQLSELKRGCEI 833
Query: 439 VIATPGRLIDFLEKGT---TNLQRCT 507
V+ATPGRLID L TNL+R T
Sbjct: 834 VVATPGRLIDVLTTSNGKITNLKRIT 859
Score = 57.2 bits (132), Expect = 3e-07
Identities = 24/42 (57%), Positives = 34/42 (80%)
Frame = +3
Query: 492 LTAVHILVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSA 617
L + ++V+DEADRM D+GFEPQI KI+ RPD+QT+++SA
Sbjct: 855 LKRITMVVIDEADRMFDLGFEPQIAKILATTRPDKQTVLFSA 896
Score = 42.7 bits (96), Expect = 0.008
Identities = 21/65 (32%), Positives = 37/65 (56%), Gaps = 1/65 (1%)
Frame = +3
Query: 6 RGNNHEVTVSGVEVHNPIQYFEEANFPDYVQQG-VKTMGYKEPTPIQAQGWPIAMSGKNL 182
R N E+ V G EV PI+ + ++ D + + ++ Y +P PIQ Q P+ MSG+++
Sbjct: 677 RENLGEIQVKGQEVPRPIKSWLQSGLSDRILEVLIEKKKYDKPFPIQCQSLPVIMSGRDM 736
Query: 183 VGVLK 197
+ L+
Sbjct: 737 IDFLR 741
Score = 34.7 bits (76), Expect = 2.1
Identities = 14/22 (63%), Positives = 18/22 (81%)
Frame = +2
Query: 194 QTGSGKTLAYILPAIVHINNHR 259
+TGSGKTLAY+LP I H++ R
Sbjct: 752 ETGSGKTLAYLLPMIRHVSAQR 773
>UniRef50_A2DH37 Cluster: DEAD/DEAH box helicase family protein;
n=2; Trichomonas vaginalis G3|Rep: DEAD/DEAH box
helicase family protein - Trichomonas vaginalis G3
Length = 541
Score = 77.8 bits (183), Expect = 2e-13
Identities = 39/77 (50%), Positives = 49/77 (63%)
Frame = +1
Query: 280 PIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGR 459
P + L PTRELA QI + F + ++ TCVFGGAP EQ R+L RG++IVIATPGR
Sbjct: 192 PSCVALCPTRELAIQIFEETRKFCKGTDLKTTCVFGGAPITEQIRNLSRGIDIVIATPGR 251
Query: 460 LIDFLEKGTTNLQRCTF 510
LID L++ L F
Sbjct: 252 LIDILKQHCITLSEVRF 268
Score = 51.6 bits (118), Expect = 2e-05
Identities = 26/46 (56%), Positives = 36/46 (78%), Gaps = 4/46 (8%)
Frame = +3
Query: 492 LTAVHILVLDEADRMLDMGFEPQIRKIIE--QIRP--DRQTLMWSA 617
L+ V L+LDEADRMLDMGFEPQ++++I + P DRQT+++SA
Sbjct: 263 LSEVRFLILDEADRMLDMGFEPQMQEVINGWDMPPADDRQTMLFSA 308
>UniRef50_Q4PFD9 Cluster: Pre-mRNA-processing ATP-dependent RNA
helicase PRP5; n=1; Ustilago maydis|Rep:
Pre-mRNA-processing ATP-dependent RNA helicase PRP5 -
Ustilago maydis (Smut fungus)
Length = 1156
Score = 77.8 bits (183), Expect = 2e-13
Identities = 38/91 (41%), Positives = 55/91 (60%), Gaps = 3/91 (3%)
Frame = +1
Query: 247 KQPPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLER 426
K P+ +GP+ +++ PTRELA QI + F +R CV+GGAP EQ ++++
Sbjct: 539 KDQRPVEPSEGPVGIIMTPTRELAVQIYREMRPFIKALGLRAACVYGGAPISEQIAEMKK 598
Query: 427 GVEIVIATPGRLIDFLEKGT---TNLQRCTF 510
+IV+ATPGRLID L + TNL R T+
Sbjct: 599 TADIVVATPGRLIDLLTANSGRVTNLYRVTY 629
Score = 63.3 bits (147), Expect = 5e-09
Identities = 29/42 (69%), Positives = 34/42 (80%)
Frame = +3
Query: 492 LTAVHILVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSA 617
L V LVLDEADRM DMGFEPQ+ KI+ IRPDRQT+++SA
Sbjct: 624 LYRVTYLVLDEADRMFDMGFEPQVMKILNNIRPDRQTVLFSA 665
Score = 49.6 bits (113), Expect = 7e-05
Identities = 21/58 (36%), Positives = 32/58 (55%)
Frame = +3
Query: 24 VTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVLK 197
+TV G + P+ + P +K +GY PTPIQ+Q P MSG++++GV K
Sbjct: 464 ITVRGRDCPKPLTKWSHCGLPASCLDVIKRLGYSAPTPIQSQAMPAIMSGRDIIGVAK 521
>UniRef50_A5E058 Cluster: Pre-mRNA-processing ATP-dependent RNA
helicase PRP5; n=1; Lodderomyces elongisporus NRRL
YB-4239|Rep: Pre-mRNA-processing ATP-dependent RNA
helicase PRP5 - Lodderomyces elongisporus (Yeast)
(Saccharomyces elongisporus)
Length = 994
Score = 77.8 bits (183), Expect = 2e-13
Identities = 39/83 (46%), Positives = 53/83 (63%), Gaps = 3/83 (3%)
Frame = +1
Query: 271 GDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIAT 450
G+GPI LVL+PTRELA QI++ F T ++ C +GG+ Q +L+RGV +++AT
Sbjct: 459 GEGPIGLVLSPTRELALQIEKEILKFSSTMDLKVCCCYGGSNIENQISELKRGVNVIVAT 518
Query: 451 PGRLIDFLEKG---TTNLQRCTF 510
PGRLID L T L+R TF
Sbjct: 519 PGRLIDLLAANGGRITTLRRTTF 541
Score = 63.3 bits (147), Expect = 5e-09
Identities = 28/41 (68%), Positives = 35/41 (85%)
Frame = +3
Query: 510 LVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSAYLAQK 632
+VLDEADRM DMGFEPQI+KI QIRPD+QT+++SA +K
Sbjct: 542 VVLDEADRMFDMGFEPQIQKIFTQIRPDKQTVLFSATFPRK 582
Score = 39.9 bits (89), Expect = 0.056
Identities = 19/59 (32%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Frame = +3
Query: 24 VTVSGVEVHNPIQYFEEANFPDYVQQGVKT-MGYKEPTPIQAQGWPIAMSGKNLVGVLK 197
V G V P + + P+ V ++ +G+ +P+PIQ Q PI +SG++++GV K
Sbjct: 375 VRARGKNVPPPFLTWGQLLMPESVMSVIQNDLGFAKPSPIQCQAIPIVLSGRDMIGVAK 433
>UniRef50_A5BHG9 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 757
Score = 77.4 bits (182), Expect = 3e-13
Identities = 34/73 (46%), Positives = 53/73 (72%)
Frame = +1
Query: 280 PIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGR 459
P AL+L+PTREL+ QI + A F + + ++ +GGAP +Q R+LERGV+I++ATPGR
Sbjct: 197 PTALILSPTRELSCQIHEEAKKFSYKTGLKVVVAYGGAPISQQFRNLERGVDILVATPGR 256
Query: 460 LIDFLEKGTTNLQ 498
L+D +E+ +L+
Sbjct: 257 LVDMIERARVSLR 269
Score = 54.4 bits (125), Expect = 2e-06
Identities = 29/46 (63%), Positives = 35/46 (76%), Gaps = 4/46 (8%)
Frame = +3
Query: 492 LTAVHILVLDEADRMLDMGFEPQIRKIIEQI-RPD---RQTLMWSA 617
L + L LDEADRMLDMGFEPQIRKI+EQ+ P RQT+++SA
Sbjct: 268 LRMIKYLALDEADRMLDMGFEPQIRKIVEQMDMPPPGARQTMLFSA 313
Score = 33.1 bits (72), Expect = 6.5
Identities = 13/31 (41%), Positives = 21/31 (67%)
Frame = +3
Query: 93 VQQGVKTMGYKEPTPIQAQGWPIAMSGKNLV 185
+ Q ++ Y +PTPIQ PIAM+G++L+
Sbjct: 131 LNQNIRRCKYVKPTPIQRHAIPIAMAGRDLM 161
>UniRef50_Q6BG49 Cluster: RNA helicase, putative; n=1; Paramecium
tetraurelia|Rep: RNA helicase, putative - Paramecium
tetraurelia
Length = 1157
Score = 77.0 bits (181), Expect = 4e-13
Identities = 41/88 (46%), Positives = 52/88 (59%), Gaps = 3/88 (3%)
Frame = +1
Query: 256 PPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVE 435
P ++ GDGPIA+++APTRELA QI F + C GGA Q DL+RG E
Sbjct: 570 PALKDGDGPIAIIMAPTRELAHQIYVNCRWFTSILNLNVVCCVGGAGIAGQLSDLKRGTE 629
Query: 436 IVIATPGRLIDFLEKGT---TNLQRCTF 510
IV+ TPGR+ID L TNL+R T+
Sbjct: 630 IVVCTPGRMIDVLTTSNGKITNLRRVTY 657
Score = 69.3 bits (162), Expect = 8e-11
Identities = 64/205 (31%), Positives = 93/205 (45%), Gaps = 6/205 (2%)
Frame = +3
Query: 21 EVTVSGVEVHNPIQYFEEANFPDYVQQG-VKTMGYKEPTPIQAQGWPIAMSGKNLVGVLK 197
++ V G +V PIQ + + D V ++ + P PIQAQ P MSG++ +G+ +
Sbjct: 490 DIKVRGKDVPKPIQNWYQCGLNDRVLNVLIEKKKFINPFPIQAQAVPCIMSGRDFIGIAE 549
Query: 198 RVPAKRWPTSCQPLCT*TTTAYSER*WSDCFGL-GAYQRVSTTNSASCCRFWTHILCS*H 374
K PL + + + A R CR++T IL
Sbjct: 550 TGSGKTL-AYLLPLLRHVLDQPALKDGDGPIAIIMAPTRELAHQIYVNCRWFTSILNLNV 608
Query: 375 VC-VWWCS*KRASPGLGEGSRNSHCYSR*IN*FLGKGHNQLT---AVHILVLDEADRMLD 542
VC V L G+ C + L + ++T V +V+DEADRM D
Sbjct: 609 VCCVGGAGIAGQLSDLKRGTEIVVCTPGRMIDVLTTSNGKITNLRRVTYVVIDEADRMFD 668
Query: 543 MGFEPQIRKIIEQIRPDRQTLMWSA 617
+GFEPQI KII+ IRPDRQ +M+SA
Sbjct: 669 LGFEPQICKIIQNIRPDRQLVMFSA 693
Score = 33.5 bits (73), Expect = 4.9
Identities = 13/25 (52%), Positives = 19/25 (76%)
Frame = +2
Query: 173 KEFSWRTQTGSGKTLAYILPAIVHI 247
++F +TGSGKTLAY+LP + H+
Sbjct: 542 RDFIGIAETGSGKTLAYLLPLLRHV 566
>UniRef50_Q54CB8 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 573
Score = 77.0 bits (181), Expect = 4e-13
Identities = 36/78 (46%), Positives = 49/78 (62%)
Frame = +1
Query: 277 GPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPG 456
GP LV+APTRELA QI Q A + + ++GGAP+R Q L R +IV+ TPG
Sbjct: 212 GPSVLVVAPTRELANQINQEAEQYLRLVNIEIATIYGGAPRRSQQLQLSRRPKIVVGTPG 271
Query: 457 RLIDFLEKGTTNLQRCTF 510
R+IDF+E G +L+ +F
Sbjct: 272 RIIDFMESGDLSLKNISF 289
Score = 59.3 bits (137), Expect = 9e-08
Identities = 28/55 (50%), Positives = 35/55 (63%)
Frame = +3
Query: 468 FLGKGHNQLTAVHILVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSAYLAQK 632
F+ G L + LV+DEADR+++MGFE QI I IRPDRQ L WSA +K
Sbjct: 276 FMESGDLSLKNISFLVVDEADRLMEMGFEQQIDGIFNSIRPDRQVLYWSATWPKK 330
Score = 42.3 bits (95), Expect = 0.011
Identities = 17/48 (35%), Positives = 30/48 (62%)
Frame = +3
Query: 54 PIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVLK 197
PI E F ++ + +++PTP+Q+ GWPIA+SG +++G+ K
Sbjct: 138 PIDTIESVPFQSTIKNFLSKK-FEKPTPVQSLGWPIALSGSDMLGISK 184
Score = 33.9 bits (74), Expect = 3.7
Identities = 14/19 (73%), Positives = 18/19 (94%)
Frame = +2
Query: 191 TQTGSGKTLAYILPAIVHI 247
++TGSGKTL++ILPAI HI
Sbjct: 183 SKTGSGKTLSFILPAIEHI 201
>UniRef50_Q9VHP0 Cluster: ATP-dependent RNA helicase bel; n=4;
Protostomia|Rep: ATP-dependent RNA helicase bel -
Drosophila melanogaster (Fruit fly)
Length = 798
Score = 77.0 bits (181), Expect = 4e-13
Identities = 37/82 (45%), Positives = 51/82 (62%)
Frame = +1
Query: 265 RRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVI 444
RR P+ LVLAPTRELA QI + A F + S +R ++GG EQ R+L+RG +++
Sbjct: 374 RRKQYPLGLVLAPTRELATQIFEEAKKFAYRSRMRPAVLYGGNNTSEQMRELDRGCHLIV 433
Query: 445 ATPGRLIDFLEKGTTNLQRCTF 510
ATPGRL D + +G L+ F
Sbjct: 434 ATPGRLEDMITRGKVGLENIRF 455
Score = 59.3 bits (137), Expect = 9e-08
Identities = 31/51 (60%), Positives = 37/51 (72%), Gaps = 4/51 (7%)
Frame = +3
Query: 477 KGHNQLTAVHILVLDEADRMLDMGFEPQIRKIIEQIR----PDRQTLMWSA 617
+G L + LVLDEADRMLDMGFEPQIR+I+EQ+ RQTLM+SA
Sbjct: 445 RGKVGLENIRFLVLDEADRMLDMGFEPQIRRIVEQLNMPPTGQRQTLMFSA 495
Score = 34.7 bits (76), Expect = 2.1
Identities = 15/54 (27%), Positives = 28/54 (51%)
Frame = +3
Query: 24 VTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLV 185
V +G V I F++ + ++ V Y +PTP+Q PI ++G++L+
Sbjct: 283 VEATGQNVPPNITSFDDVQLTEIIRNNVALARYDKPTPVQKHAIPIIINGRDLM 336
>UniRef50_UPI000065DC0B Cluster: Probable ATP-dependent RNA helicase
DDX43 (EC 3.6.1.-) (DEAD box protein 43) (DEAD box
protein HAGE) (Helical antigen).; n=1; Takifugu
rubripes|Rep: Probable ATP-dependent RNA helicase DDX43
(EC 3.6.1.-) (DEAD box protein 43) (DEAD box protein
HAGE) (Helical antigen). - Takifugu rubripes
Length = 510
Score = 76.2 bits (179), Expect = 7e-13
Identities = 42/106 (39%), Positives = 59/106 (55%), Gaps = 1/106 (0%)
Frame = +1
Query: 250 QPPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERG 429
QP P +GP LVL PTRELA Q+ + + Y ++ CV+GG ++ Q +ERG
Sbjct: 140 QPVPKCERNGPGMLVLTPTRELALQVDAECKKYSYKDY-KSVCVYGGGDRKAQIHKVERG 198
Query: 430 VEIVIATPGRLIDFLEKGTTNLQRCTF*F-LMRLIVCWIWDLNHKS 564
V+IVIATPGRL D NL+ T+ + + V +WD +S
Sbjct: 199 VDIVIATPGRLHDLQMNKLINLRSITYLVSCLHVFVFKMWDSRLRS 244
Score = 60.1 bits (139), Expect = 5e-08
Identities = 27/35 (77%), Positives = 31/35 (88%)
Frame = +3
Query: 513 VLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSA 617
VLDEADRMLD+GFEPQI KI+ +RPDRQT+M SA
Sbjct: 253 VLDEADRMLDLGFEPQIMKILLDVRPDRQTVMTSA 287
Score = 43.2 bits (97), Expect = 0.006
Identities = 20/51 (39%), Positives = 30/51 (58%), Gaps = 2/51 (3%)
Frame = +3
Query: 45 VHNPIQYFEEANFPDY--VQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGV 191
+ P + F EA F Y + VK G+ PTPIQ+Q WP+ +SG +L+ +
Sbjct: 69 IPKPCRTFLEA-FQHYTEIMDNVKHAGFVNPTPIQSQAWPVLLSGDDLIAI 118
Score = 35.9 bits (79), Expect = 0.92
Identities = 13/19 (68%), Positives = 17/19 (89%)
Frame = +2
Query: 194 QTGSGKTLAYILPAIVHIN 250
QTG+GKTLAY+LP +H+N
Sbjct: 120 QTGTGKTLAYLLPGFIHMN 138
>UniRef50_A2WLP5 Cluster: Putative uncharacterized protein; n=3;
Magnoliophyta|Rep: Putative uncharacterized protein -
Oryza sativa subsp. indica (Rice)
Length = 523
Score = 76.2 bits (179), Expect = 7e-13
Identities = 34/45 (75%), Positives = 37/45 (82%)
Frame = +3
Query: 483 HNQLTAVHILVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSA 617
H L + LVLDEADRMLDMGFEPQI+KI+ QIRPDRQTL WSA
Sbjct: 209 HTNLRRITYLVLDEADRMLDMGFEPQIKKIVSQIRPDRQTLYWSA 253
Score = 72.1 bits (169), Expect = 1e-11
Identities = 27/57 (47%), Positives = 42/57 (73%)
Frame = +3
Query: 21 EVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGV 191
E+TV G +V P++ F + FP+YV Q + G+ EPTPIQ+QGWP+A+ G++L+G+
Sbjct: 80 EITVEGRDVPKPVREFRDVGFPEYVLQEITKAGFVEPTPIQSQGWPMALRGRDLIGI 136
Score = 60.9 bits (141), Expect = 3e-08
Identities = 49/125 (39%), Positives = 58/125 (46%)
Frame = +1
Query: 256 PPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVE 435
P + GDGPI LVLAPTRELA QIQQ A FG VE
Sbjct: 159 PILAPGDGPIVLVLAPTRELAVQIQQEATKFG--------------------------VE 192
Query: 436 IVIATPGRLIDFLEKGTTNLQRCTF*FLMRLIVCWIWDLNHKSEKSLSKYAQTDRL*CGQ 615
IVIATPGRLID +E TNL+R T+ L + +K +S+ +
Sbjct: 193 IVIATPGRLIDMIESHHTNLRRITYLVLDEADRMLDMGFEPQIKKIVSQIRPDRQTLYWS 252
Query: 616 LTWPK 630
TWPK
Sbjct: 253 ATWPK 257
Score = 40.3 bits (90), Expect = 0.043
Identities = 16/19 (84%), Positives = 19/19 (100%)
Frame = +2
Query: 194 QTGSGKTLAYILPAIVHIN 250
+TGSGKTLAY+LPAIVH+N
Sbjct: 138 ETGSGKTLAYLLPAIVHVN 156
>UniRef50_Q66WQ1 Cluster: DEAD box DNA helicase; n=2; Plasmodium
falciparum|Rep: DEAD box DNA helicase - Plasmodium
falciparum
Length = 516
Score = 76.2 bits (179), Expect = 7e-13
Identities = 33/81 (40%), Positives = 48/81 (59%)
Frame = +1
Query: 268 RGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIA 447
R L+L PTREL Q+ F +++ V+GG PK Q +L++G +I++A
Sbjct: 198 RASDTYGLILLPTRELCLQVLDEIKSFEKNLPIKSVAVYGGVPKYYQINNLKKGADIIVA 257
Query: 448 TPGRLIDFLEKGTTNLQRCTF 510
TPGRL+DFLE G NL +C +
Sbjct: 258 TPGRLLDFLENGNINLLKCIY 278
Score = 51.2 bits (117), Expect = 2e-05
Identities = 24/50 (48%), Positives = 34/50 (68%)
Frame = +3
Query: 468 FLGKGHNQLTAVHILVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSA 617
FL G+ L +V+DEADR+LDMGFE Q+RKI+ Q+ ++Q L +A
Sbjct: 265 FLENGNINLLKCIYVVIDEADRLLDMGFEKQLRKIMTQVNKNKQLLFLTA 314
Score = 44.8 bits (101), Expect = 0.002
Identities = 23/60 (38%), Positives = 34/60 (56%)
Frame = +3
Query: 12 NNHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGV 191
NN + G+ +HN I F + F + + + + EPT IQ WPIA+SGK+L+GV
Sbjct: 47 NNIYINKDGI-IHNIINKFSDVCFHESILNYLNNK-FSEPTAIQKITWPIALSGKDLIGV 104
Score = 35.5 bits (78), Expect = 1.2
Identities = 13/22 (59%), Positives = 18/22 (81%)
Frame = +2
Query: 194 QTGSGKTLAYILPAIVHINNHR 259
+TGSGKTLA++LP +HI H+
Sbjct: 106 ETGSGKTLAFVLPCFMHILKHK 127
>UniRef50_A5K071 Cluster: ATP-dependent RNA helicase, putative; n=6;
Plasmodium|Rep: ATP-dependent RNA helicase, putative -
Plasmodium vivax
Length = 717
Score = 75.8 bits (178), Expect = 9e-13
Identities = 38/115 (33%), Positives = 62/115 (53%)
Frame = +1
Query: 289 LVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLID 468
L+L PTREL Q+ F ++R+ V+GG PK Q +L++G +IV+ATPGRL+D
Sbjct: 405 LILLPTRELCMQVVDEIKAFEKELHIRSVAVYGGVPKYTQISNLKKGADIVVATPGRLLD 464
Query: 469 FLEKGTTNLQRCTF*FLMRLIVCWIWDLNHKSEKSLSKYAQTDRL*CGQLTWPKR 633
LE G +L RC + + + +K +++ + +L TWP++
Sbjct: 465 LLESGVIHLLRCIYVVIDEADRLLDMGFEKQLKKIMTQVNRNKQLLFFTATWPEQ 519
Score = 45.2 bits (102), Expect = 0.002
Identities = 24/59 (40%), Positives = 33/59 (55%)
Frame = +3
Query: 15 NHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGV 191
N V+ ++N F E NF + V + +KEPT IQ WPIA+SGK+L+GV
Sbjct: 263 NIYVSKESALLNNLASSFSEVNFHEAVVNHLNAK-FKEPTAIQKVTWPIALSGKDLIGV 320
Score = 34.3 bits (75), Expect = 2.8
Identities = 14/22 (63%), Positives = 18/22 (81%)
Frame = +2
Query: 194 QTGSGKTLAYILPAIVHINNHR 259
+TGSGKTLA+ LPA++HI R
Sbjct: 322 ETGSGKTLAFALPALMHILKQR 343
>UniRef50_Q5CP59 Cluster: DEAD box polypeptide, Y
chromosome-related; n=3; Apicomplexa|Rep: DEAD box
polypeptide, Y chromosome-related - Cryptosporidium
hominis
Length = 702
Score = 75.4 bits (177), Expect = 1e-12
Identities = 36/83 (43%), Positives = 54/83 (65%)
Frame = +1
Query: 262 IRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIV 441
I+R P+ALVL+PTRELA Q + + F + +R ++GG+ R Q DL+RG +I+
Sbjct: 279 IKRMAYPVALVLSPTRELAIQTYEESRKFCFGTGIRTNVLYGGSEVRSQIMDLDRGSDII 338
Query: 442 IATPGRLIDFLEKGTTNLQRCTF 510
+ATPGRL D +++G NL+ F
Sbjct: 339 VATPGRLRDLIDRGKVNLKLIKF 361
Score = 51.6 bits (118), Expect = 2e-05
Identities = 27/54 (50%), Positives = 35/54 (64%), Gaps = 5/54 (9%)
Frame = +3
Query: 471 LGKGHNQLTAVHILVLDEADRMLDMGFEPQIRKIIEQIR-----PDRQTLMWSA 617
+ +G L + L+LDEADRMLDMGF PQIR+I+E RQT+M+SA
Sbjct: 349 IDRGKVNLKLIKFLILDEADRMLDMGFAPQIREIVEDSEMPHSLDGRQTVMFSA 402
>UniRef50_Q4JF01 Cluster: Vasa homlogue; n=2; Eukaryota|Rep: Vasa
homlogue - Platynereis dumerilii (Dumeril's clam worm)
Length = 712
Score = 75.4 bits (177), Expect = 1e-12
Identities = 34/77 (44%), Positives = 48/77 (62%)
Frame = +1
Query: 280 PIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGR 459
P A+++ PTREL QI A F ++ VR V+GG QAR+LE+G +V+ TPGR
Sbjct: 350 PAAIIVGPTRELVNQIYLEARKFASSTCVRPVVVYGGTSVGYQARELEKGAHVVVGTPGR 409
Query: 460 LIDFLEKGTTNLQRCTF 510
L+DF+ KG NL + +
Sbjct: 410 LLDFIGKGKINLSKVKY 426
Score = 62.5 bits (145), Expect = 9e-09
Identities = 32/57 (56%), Positives = 40/57 (70%), Gaps = 4/57 (7%)
Frame = +3
Query: 468 FLGKGHNQLTAVHILVLDEADRMLDMGFEPQIRKIIEQI----RPDRQTLMWSAYLA 626
F+GKG L+ V L+LDEADRMLDMGFEP+IRK++ + RQTLM+SA A
Sbjct: 413 FIGKGKINLSKVKYLILDEADRMLDMGFEPEIRKLVTTFDMPEKGQRQTLMFSATFA 469
Score = 43.6 bits (98), Expect = 0.005
Identities = 23/56 (41%), Positives = 32/56 (57%), Gaps = 1/56 (1%)
Frame = +3
Query: 24 VTVSGVEV-HNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVG 188
V VSG N I F++A+ + V+ V+ Y PTPIQ PI +SGK+L+G
Sbjct: 257 VEVSGTNAPKNGILNFDQADLSETVRSNVRKAKYDRPTPIQKWAIPIVLSGKDLMG 312
>UniRef50_A7AWZ5 Cluster: DEAD/DEAH box helicase and helicase
conserved C-terminal domain containing protein; n=1;
Babesia bovis|Rep: DEAD/DEAH box helicase and helicase
conserved C-terminal domain containing protein - Babesia
bovis
Length = 994
Score = 75.4 bits (177), Expect = 1e-12
Identities = 42/88 (47%), Positives = 54/88 (61%), Gaps = 3/88 (3%)
Frame = +1
Query: 256 PPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVE 435
P +R +G I L++APTRELA QI ++ +R V+GG+P EQ L+RGVE
Sbjct: 454 PKLRENEGMIVLIIAPTRELASQIGVESSKLCKLVGIRTKAVYGGSPIGEQLNALKRGVE 513
Query: 436 IVIATPGRLIDFL--EKG-TTNLQRCTF 510
IV TPGRLI+ L G TNL+R TF
Sbjct: 514 IVCGTPGRLIEVLTISNGKVTNLRRVTF 541
Score = 57.6 bits (133), Expect = 3e-07
Identities = 28/48 (58%), Positives = 35/48 (72%)
Frame = +3
Query: 474 GKGHNQLTAVHILVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSA 617
GK N L V +V+DEADRM D+GF PQI I++ IRPDRQT ++SA
Sbjct: 531 GKVTN-LRRVTFVVIDEADRMFDLGFSPQISAIVDNIRPDRQTALFSA 577
Score = 37.5 bits (83), Expect = 0.30
Identities = 18/62 (29%), Positives = 30/62 (48%)
Frame = +3
Query: 6 RGNNHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLV 185
R N + V G PI F + PD + ++ Y++P PIQ Q P M G++++
Sbjct: 370 RKANGNIRVRGKYCPRPIYNFSQCGLPDPILSLLQRRNYEKPFPIQMQCIPALMCGRDVL 429
Query: 186 GV 191
+
Sbjct: 430 AI 431
Score = 34.3 bits (75), Expect = 2.8
Identities = 13/18 (72%), Positives = 17/18 (94%)
Frame = +2
Query: 194 QTGSGKTLAYILPAIVHI 247
+TGSGKT+AY+LPAI H+
Sbjct: 433 ETGSGKTMAYLLPAIRHV 450
>UniRef50_UPI00004992E6 Cluster: DEAD/DEAH box helicase; n=3;
Entamoeba histolytica HM-1:IMSS|Rep: DEAD/DEAH box
helicase - Entamoeba histolytica HM-1:IMSS
Length = 578
Score = 74.9 bits (176), Expect = 2e-12
Identities = 33/72 (45%), Positives = 50/72 (69%)
Frame = +1
Query: 280 PIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGR 459
P+AL+LAPTREL QQI + A F + +R+ CV+GG+ Q +++ +G +I++ATPGR
Sbjct: 213 PVALILAPTRELGQQIYEEAVRFTEDTPIRSVCVYGGSDSYTQIQEMGKGCDILVATPGR 272
Query: 460 LIDFLEKGTTNL 495
L+ F EK +L
Sbjct: 273 LLYFTEKKIVSL 284
Score = 53.6 bits (123), Expect = 4e-06
Identities = 29/46 (63%), Positives = 36/46 (78%), Gaps = 4/46 (8%)
Frame = +3
Query: 492 LTAVHILVLDEADRMLDMGFEPQIRKIIE--QIRP--DRQTLMWSA 617
L++V L+ DEADRMLDMGFEPQIR+I E ++ P RQTLM+SA
Sbjct: 284 LSSVRYLIFDEADRMLDMGFEPQIREICEDNEMPPVGKRQTLMFSA 329
>UniRef50_Q4QJI9 Cluster: Nucleolar RNA helicase II, putative; n=6;
Trypanosomatidae|Rep: Nucleolar RNA helicase II,
putative - Leishmania major
Length = 674
Score = 74.9 bits (176), Expect = 2e-12
Identities = 40/85 (47%), Positives = 49/85 (57%)
Frame = +1
Query: 247 KQPPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLER 426
K P + RG GP A++ PTRELA Q+Q V V T ++GG Q R L
Sbjct: 150 KLPSHLTRGRGPAAVIFCPTRELAIQVQDVLCGISCGLVV--TALYGGVAYANQERVLRS 207
Query: 427 GVEIVIATPGRLIDFLEKGTTNLQR 501
GV+IV+ATPGR DFLEKGT + R
Sbjct: 208 GVDIVVATPGRAKDFLEKGTLHFDR 232
Score = 38.3 bits (85), Expect = 0.17
Identities = 24/60 (40%), Positives = 32/60 (53%), Gaps = 10/60 (16%)
Frame = +3
Query: 468 FLGKGHNQLTAVHILVLDEADRMLDMGFEPQIRKIIEQI----------RPDRQTLMWSA 617
FL KG V + LDEAD MLD+GF+ I ++ Q+ RP QTL++SA
Sbjct: 222 FLEKGTLHFDRVVMACLDEADHMLDIGFKDDIELLLSQVAEQNGSVGAERPAHQTLLFSA 281
>UniRef50_Q9XVZ6 Cluster: Putative uncharacterized protein; n=2;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 504
Score = 74.5 bits (175), Expect = 2e-12
Identities = 38/97 (39%), Positives = 53/97 (54%)
Frame = +1
Query: 220 LHLASHCAHKQPPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPK 399
LH+ + A + + P LVL+PTRELAQQI+ + + Y ++ C++GG +
Sbjct: 144 LHIDAQLAQYEKNDEEQKPSPFVLVLSPTRELAQQIEGEVKKYSYNGY-KSVCLYGGGSR 202
Query: 400 REQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTF 510
EQ GVEIVIATPGRL D G +L T+
Sbjct: 203 PEQVEACRGGVEIVIATPGRLTDLSNDGVISLASVTY 239
Score = 53.6 bits (123), Expect = 4e-06
Identities = 26/42 (61%), Positives = 32/42 (76%)
Frame = +3
Query: 492 LTAVHILVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSA 617
L +V +VLDEADRMLDMGFE IR+I+ +IRPDR + SA
Sbjct: 234 LASVTYVVLDEADRMLDMGFEVAIRRILFEIRPDRLVALTSA 275
Score = 43.6 bits (98), Expect = 0.005
Identities = 19/54 (35%), Positives = 36/54 (66%), Gaps = 1/54 (1%)
Frame = +3
Query: 33 SGVEVHNPIQYFEEANFPDYVQQG-VKTMGYKEPTPIQAQGWPIAMSGKNLVGV 191
S V++ P+ FE+A + G ++ G+++P+PIQ+Q WP+ +SG++ +GV
Sbjct: 74 STVKIPPPVNSFEQAFGSNASIMGEIRKNGFEKPSPIQSQMWPLLLSGQDCIGV 127
Score = 36.7 bits (81), Expect = 0.53
Identities = 14/20 (70%), Positives = 20/20 (100%)
Frame = +2
Query: 191 TQTGSGKTLAYILPAIVHIN 250
+QTGSGKTLA++LPA++HI+
Sbjct: 128 SQTGSGKTLAFLLPALLHID 147
>UniRef50_Q17BQ3 Cluster: Putative uncharacterized protein; n=1;
Aedes aegypti|Rep: Putative uncharacterized protein -
Aedes aegypti (Yellowfever mosquito)
Length = 154
Score = 74.5 bits (175), Expect = 2e-12
Identities = 32/50 (64%), Positives = 40/50 (80%)
Frame = +1
Query: 262 IRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQA 411
+RRGDGPIAL+LAPTRELAQQI+QV DFG ++N C+FGG+ KR +
Sbjct: 66 LRRGDGPIALILAPTRELAQQIKQVTDDFGRAIKIKNICLFGGSAKRRSS 115
Score = 33.9 bits (74), Expect = 3.7
Identities = 20/50 (40%), Positives = 32/50 (64%)
Frame = +2
Query: 101 RCKDNGLQRTDAYSSSRLADSYVWKEFSWRTQTGSGKTLAYILPAIVHIN 250
RC G+ +++ +RLA Y+ T+TGSGKTL+Y+LPA++ I+
Sbjct: 17 RCL-RGVNHSNSDPVARLASRYM----VGITKTGSGKTLSYLLPALMPID 61
>UniRef50_Q9LUW5 Cluster: DEAD-box ATP-dependent RNA helicase 53;
n=14; Magnoliophyta|Rep: DEAD-box ATP-dependent RNA
helicase 53 - Arabidopsis thaliana (Mouse-ear cress)
Length = 616
Score = 74.5 bits (175), Expect = 2e-12
Identities = 35/82 (42%), Positives = 55/82 (67%), Gaps = 1/82 (1%)
Frame = +1
Query: 268 RGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNT-CVFGGAPKREQARDLERGVEIVI 444
RG P+ LVLAPTRELA+Q+++ +F ++ +T C++GG P +Q R L+ GV++ +
Sbjct: 175 RGRNPLCLVLAPTRELARQVEK---EFRESAPSLDTICLYGGTPIGQQMRQLDYGVDVAV 231
Query: 445 ATPGRLIDFLEKGTTNLQRCTF 510
TPGR+ID +++G NL F
Sbjct: 232 GTPGRVIDLMKRGALNLSEVQF 253
Score = 44.0 bits (99), Expect = 0.003
Identities = 20/47 (42%), Positives = 32/47 (68%)
Frame = +3
Query: 477 KGHNQLTAVHILVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSA 617
+G L+ V +VLDEAD+ML +GF + I+E++ RQ++M+SA
Sbjct: 243 RGALNLSEVQFVVLDEADQMLQVGFAEDVEIILEKLPEKRQSMMFSA 289
>UniRef50_A7HG33 Cluster: DEAD/DEAH box helicase domain protein;
n=5; Cystobacterineae|Rep: DEAD/DEAH box helicase domain
protein - Anaeromyxobacter sp. Fw109-5
Length = 455
Score = 74.1 bits (174), Expect = 3e-12
Identities = 39/73 (53%), Positives = 45/73 (61%)
Frame = +1
Query: 277 GPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPG 456
G ALVLAPTRELA QI + FGH VR + GG +QA L + EIVIATPG
Sbjct: 71 GTRALVLAPTRELALQIGEELERFGHARRVRGAVIIGGVGMAQQAEALRQKREIVIATPG 130
Query: 457 RLIDFLEKGTTNL 495
RL+D LE+G L
Sbjct: 131 RLVDHLEQGNARL 143
Score = 60.1 bits (139), Expect = 5e-08
Identities = 27/52 (51%), Positives = 40/52 (76%)
Frame = +3
Query: 471 LGKGHNQLTAVHILVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSAYLA 626
L +G+ +L + LVLDEADRMLDMGF+PQ+ +I+ ++ RQTL++SA +A
Sbjct: 136 LEQGNARLDGIEALVLDEADRMLDMGFKPQLDRILRRLPKQRQTLLFSATMA 187
Score = 36.7 bits (81), Expect = 0.53
Identities = 15/41 (36%), Positives = 25/41 (60%)
Frame = +3
Query: 66 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVG 188
F E + ++ G++ PTPIQAQ P A++GK+++G
Sbjct: 6 FAELHLSPEALAALRRAGFEHPTPIQAQAIPPALAGKDVIG 46
>UniRef50_A5K9H3 Cluster: Pre-mRNA splicing factor RNA helicase
PRP28, putative; n=2; Eukaryota|Rep: Pre-mRNA splicing
factor RNA helicase PRP28, putative - Plasmodium vivax
Length = 1006
Score = 74.1 bits (174), Expect = 3e-12
Identities = 41/91 (45%), Positives = 51/91 (56%), Gaps = 3/91 (3%)
Frame = +1
Query: 247 KQPPPIR---RGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARD 417
KQ PP+ DGP AL++AP+RELA QI F R V GG QA +
Sbjct: 644 KQLPPLTYETSQDGPYALIIAPSRELAIQIFDETNKFASYCSCRTVAVVGGRNAEAQAFE 703
Query: 418 LERGVEIVIATPGRLIDFLEKGTTNLQRCTF 510
L +GVEI+I TPGR+ D LEK T L +C +
Sbjct: 704 LRKGVEIIIGTPGRIHDCLEKAYTVLNQCNY 734
Score = 48.4 bits (110), Expect = 2e-04
Identities = 21/59 (35%), Positives = 38/59 (64%)
Frame = +3
Query: 15 NHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGV 191
++E+ + G V PI+ +EE+N + + +K Y++PTPIQ Q PIA+ ++L+G+
Sbjct: 566 DNEIYIKGGIVPPPIRRWEESNLSSDLLKAIKKAKYEKPTPIQMQAIPIALEMRDLIGI 624
Score = 40.3 bits (90), Expect = 0.043
Identities = 17/38 (44%), Positives = 26/38 (68%)
Frame = +3
Query: 471 LGKGHNQLTAVHILVLDEADRMLDMGFEPQIRKIIEQI 584
L K + L + ++LDEADRM+DMGFE + I+++I
Sbjct: 722 LEKAYTVLNQCNYVILDEADRMMDMGFEDSVHFILDKI 759
>UniRef50_Q9P9G7 Cluster: DEAD-box RNA helicase; n=3;
Methanosarcinaceae|Rep: DEAD-box RNA helicase -
Methanococcoides burtonii
Length = 522
Score = 74.1 bits (174), Expect = 3e-12
Identities = 36/78 (46%), Positives = 51/78 (65%)
Frame = +1
Query: 262 IRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIV 441
I +G+G ALVL PTRELA+Q+Q +F +R ++GG Q R LER ++V
Sbjct: 64 IEKGNGIRALVLTPTRELAEQVQNSLKEFSRHKQLRVAPIYGGVAINPQIRQLER-ADVV 122
Query: 442 IATPGRLIDFLEKGTTNL 495
+ATPGRL+D +E+GT +L
Sbjct: 123 VATPGRLLDHIERGTIDL 140
Score = 55.2 bits (127), Expect = 1e-06
Identities = 27/51 (52%), Positives = 37/51 (72%)
Frame = +3
Query: 477 KGHNQLTAVHILVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSAYLAQ 629
+G L V ILVLDEADRMLDMGF + +II++ DRQT+M+SA +++
Sbjct: 135 RGTIDLGDVEILVLDEADRMLDMGFIDDVEEIIDECPSDRQTMMFSATVSK 185
Score = 32.7 bits (71), Expect = 8.6
Identities = 11/44 (25%), Positives = 26/44 (59%)
Frame = +3
Query: 57 IQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVG 188
++ F++ D + + ++ ++EPT IQ P+ + GK+++G
Sbjct: 1 MESFKKLGIEDAILRSIEDKKFEEPTEIQKMAIPLILEGKDIIG 44
>UniRef50_Q6BLU9 Cluster: Pre-mRNA-splicing ATP-dependent RNA
helicase PRP28; n=2; Saccharomycetaceae|Rep:
Pre-mRNA-splicing ATP-dependent RNA helicase PRP28 -
Debaryomyces hansenii (Yeast) (Torulaspora hansenii)
Length = 580
Score = 74.1 bits (174), Expect = 3e-12
Identities = 37/77 (48%), Positives = 45/77 (58%)
Frame = +1
Query: 280 PIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGR 459
P+ L+LAPTRELA QI + A FG + + GG E + GV IV+ATPGR
Sbjct: 238 PLGLILAPTRELALQITKEAKLFGDKLNLNVVTIIGGHQYEETVHSVRNGVHIVVATPGR 297
Query: 460 LIDFLEKGTTNLQRCTF 510
LID LE+G NL C F
Sbjct: 298 LIDSLERGIINLSNCYF 314
Score = 48.4 bits (110), Expect = 2e-04
Identities = 19/60 (31%), Positives = 38/60 (63%), Gaps = 1/60 (1%)
Frame = +3
Query: 15 NHEVTVSGVEVHNPIQYFEEANFP-DYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGV 191
++ +T G ++ NP++ + E+ P + +K +GY PTPIQ P+A++G+++VG+
Sbjct: 139 DYNITSKGGDIENPLRCWAESKLPAKLLNILIKNLGYDSPTPIQRASIPLALNGRDIVGI 198
Score = 35.1 bits (77), Expect = 1.6
Identities = 14/38 (36%), Positives = 24/38 (63%)
Frame = +3
Query: 471 LGKGHNQLTAVHILVLDEADRMLDMGFEPQIRKIIEQI 584
L +G L+ + +DEAD+M+DMGFE ++ I+ +
Sbjct: 302 LERGIINLSNCYFFTMDEADKMIDMGFEKSLQSILNYL 339
>UniRef50_Q54T87 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 586
Score = 73.7 bits (173), Expect = 4e-12
Identities = 36/70 (51%), Positives = 46/70 (65%)
Frame = +1
Query: 271 GDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIAT 450
G P+ LV+APTRELAQQI++V + +R C +GG K +Q+R L GV+IVI T
Sbjct: 182 GATPLVLVMAPTRELAQQIEEVCKTSIRGTSIRQLCAYGGLGKIDQSRILRNGVDIVIGT 241
Query: 451 PGRLIDFLEK 480
PGRL D L K
Sbjct: 242 PGRLNDLLRK 251
Score = 62.9 bits (146), Expect = 7e-09
Identities = 33/53 (62%), Positives = 40/53 (75%)
Frame = +3
Query: 459 IN*FLGKGHNQLTAVHILVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSA 617
+N L K H L++V LVLDEADRMLDMGF PQI +I+QI +RQTLM+SA
Sbjct: 245 LNDLLRKHH--LSSVQYLVLDEADRMLDMGFMPQIESLIDQIPKERQTLMFSA 295
Score = 47.6 bits (108), Expect = 3e-04
Identities = 23/58 (39%), Positives = 30/58 (51%)
Frame = +3
Query: 18 HEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGV 191
H V + G NP Q F + FP Q + G+ PT IQ Q WPI + G +LVG+
Sbjct: 98 HNVLIEGKSQPNPFQKFTDYEFPRMFQHIFQ--GFTAPTVIQGQSWPIILGGNDLVGL 153
>UniRef50_A7TJK8 Cluster: Putative uncharacterized protein; n=1;
Vanderwaltozyma polyspora DSM 70294|Rep: Putative
uncharacterized protein - Vanderwaltozyma polyspora DSM
70294
Length = 872
Score = 73.7 bits (173), Expect = 4e-12
Identities = 40/82 (48%), Positives = 51/82 (62%), Gaps = 4/82 (4%)
Frame = +1
Query: 277 GPIALVLAPTRELAQQIQQVAADFGHTSY-VRNTCVFGGAPKREQARDLERGVEIVIATP 453
GP+ L+LAPTRELA QI + F +R C GG+ ++Q DL+RGVEIV+ATP
Sbjct: 351 GPLGLILAPTRELALQINEEVEKFTKQDRSIRTICCTGGSEMKKQINDLKRGVEIVVATP 410
Query: 454 GRLIDFLEKGTTNL---QRCTF 510
GRLID L + L +R TF
Sbjct: 411 GRLIDILTLNSGKLISTKRITF 432
Score = 54.8 bits (126), Expect = 2e-06
Identities = 22/44 (50%), Positives = 34/44 (77%)
Frame = +3
Query: 501 VHILVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSAYLAQK 632
+ +V+DEADR+ DMGFEPQI +I++ +RPD+Q +++SA K
Sbjct: 430 ITFVVMDEADRLFDMGFEPQITQIMKTVRPDKQCVLFSATFPNK 473
Score = 37.5 bits (83), Expect = 0.30
Identities = 20/59 (33%), Positives = 30/59 (50%), Gaps = 1/59 (1%)
Frame = +3
Query: 24 VTVSGVEVHNPIQYFEEANFP-DYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVLK 197
+ V G I + + P D + K + Y EPT IQ+Q P MSG++L+G+ K
Sbjct: 264 IKVKGKHCPKLITRWSQLGLPTDIMNLITKELKYDEPTAIQSQAIPAIMSGRDLIGISK 322
>UniRef50_Q3SF48 Cluster: DEAD/DEAH box helicase; n=6; cellular
organisms|Rep: DEAD/DEAH box helicase - Thiobacillus
denitrificans (strain ATCC 25259)
Length = 533
Score = 73.3 bits (172), Expect = 5e-12
Identities = 37/82 (45%), Positives = 50/82 (60%), Gaps = 1/82 (1%)
Frame = +1
Query: 259 PIRRGDGPIALVLAPTRELAQQIQQVAADFG-HTSYVRNTCVFGGAPKREQARDLERGVE 435
P + GP LVL PTRELA Q+++ A +G R C+ GGAP Q + L + V+
Sbjct: 67 PAVKSIGPRVLVLTPTRELALQVEKAAMTYGKEMRRFRTACLVGGAPYGLQLKRLSQPVD 126
Query: 436 IVIATPGRLIDFLEKGTTNLQR 501
+V+ATPGRLID LE+G + R
Sbjct: 127 VVVATPGRLIDHLERGKIDFSR 148
Score = 50.4 bits (115), Expect = 4e-05
Identities = 25/51 (49%), Positives = 34/51 (66%)
Frame = +3
Query: 471 LGKGHNQLTAVHILVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSAYL 623
L +G + + +LVLDEADRMLDMGF I+ I + +RQTL++SA L
Sbjct: 139 LERGKIDFSRLEVLVLDEADRMLDMGFVDDIKAIAARCPAERQTLLFSATL 189
>UniRef50_Q0RTL3 Cluster: Cold-shock DeaD box ATP-dependent RNA
helicase; n=2; Bacteria|Rep: Cold-shock DeaD box
ATP-dependent RNA helicase - Frankia alni (strain
ACN14a)
Length = 608
Score = 73.3 bits (172), Expect = 5e-12
Identities = 38/78 (48%), Positives = 49/78 (62%), Gaps = 1/78 (1%)
Frame = +1
Query: 265 RRGD-GPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIV 441
R GD GP ALVL PTRELA Q+ + +G R V+GGAP Q R L +GV++V
Sbjct: 123 RTGDHGPQALVLVPTRELAVQVSEAIHRYGRDLGARVLPVYGGAPIGRQVRALVQGVDVV 182
Query: 442 IATPGRLIDFLEKGTTNL 495
+ATPGR +D + +GT L
Sbjct: 183 VATPGRALDHMGRGTLRL 200
Score = 54.0 bits (124), Expect = 3e-06
Identities = 26/51 (50%), Positives = 35/51 (68%)
Frame = +3
Query: 471 LGKGHNQLTAVHILVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSAYL 623
+G+G +L +H +VLDEAD MLDMGF I I+EQ RQT+++SA L
Sbjct: 193 MGRGTLRLDGLHTVVLDEADEMLDMGFAEDIDAILEQAPQKRQTVLFSATL 243
Score = 33.9 bits (74), Expect = 3.7
Identities = 14/41 (34%), Positives = 25/41 (60%)
Frame = +3
Query: 66 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVG 188
F E + + + +GY+EPTPIQ + P ++G++L+G
Sbjct: 59 FAELALRPELLRSLAALGYEEPTPIQREAVPPLVAGRDLLG 99
>UniRef50_O97032 Cluster: DjVLGB; n=2; Dugesia|Rep: DjVLGB - Dugesia
japonica (Planarian)
Length = 781
Score = 73.3 bits (172), Expect = 5e-12
Identities = 33/77 (42%), Positives = 50/77 (64%)
Frame = +1
Query: 280 PIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGR 459
P L+LAPTRELA QI + F + +R+ V+GGA Q R+++ G +++ATPGR
Sbjct: 262 PKCLILAPTRELAIQILSESQKFSLNTPLRSCVVYGGADTHSQIREVQMGCHLLVATPGR 321
Query: 460 LIDFLEKGTTNLQRCTF 510
L+DF+EK +L+ C +
Sbjct: 322 LVDFIEKNKISLEFCKY 338
Score = 57.2 bits (132), Expect = 3e-07
Identities = 32/54 (59%), Positives = 37/54 (68%), Gaps = 4/54 (7%)
Frame = +3
Query: 468 FLGKGHNQLTAVHILVLDEADRMLDMGFEPQIRKIIEQIRP----DRQTLMWSA 617
F+ K L +VLDEADRMLDMGFEPQIRKIIE+ +RQTLM+SA
Sbjct: 325 FIEKNKISLEFCKYIVLDEADRMLDMGFEPQIRKIIEESNMPSGINRQTLMFSA 378
>UniRef50_Q0CX32 Cluster: DEAD-box protein 3; n=11;
Pezizomycotina|Rep: DEAD-box protein 3 - Aspergillus
terreus (strain NIH 2624)
Length = 590
Score = 73.3 bits (172), Expect = 5e-12
Identities = 33/67 (49%), Positives = 48/67 (71%)
Frame = +1
Query: 280 PIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGR 459
P+ LV+APTREL+ QI A + S +R V+GGAP R+Q +L++G +I+I TPGR
Sbjct: 214 PLVLVVAPTRELSMQIFDEARRLCYRSMLRPCVVYGGAPVRDQREELQKGCDILIGTPGR 273
Query: 460 LIDFLEK 480
L+DF++K
Sbjct: 274 LLDFMDK 280
Score = 38.7 bits (86), Expect = 0.13
Identities = 17/53 (32%), Positives = 28/53 (52%)
Frame = +3
Query: 15 NHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSG 173
N EV E NP++ F++A +++ ++ Y PTPIQA P ++G
Sbjct: 118 NIEVVAESRERPNPVKNFDDAGLHPIMRENIRLCRYNVPTPIQAYAIPAILTG 170
>UniRef50_P38712 Cluster: ATP-dependent rRNA helicase RRP3; n=6;
Ascomycota|Rep: ATP-dependent rRNA helicase RRP3 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 501
Score = 73.3 bits (172), Expect = 5e-12
Identities = 36/64 (56%), Positives = 44/64 (68%)
Frame = +1
Query: 286 ALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLI 465
A +LAPTRELAQQI++ G VR+TC+ GG +QARDL R I+IATPGRL+
Sbjct: 152 ACILAPTRELAQQIKETFDSLGSLMGVRSTCIVGGMNMMDQARDLMRKPHIIIATPGRLM 211
Query: 466 DFLE 477
D LE
Sbjct: 212 DHLE 215
Score = 38.3 bits (85), Expect = 0.17
Identities = 20/48 (41%), Positives = 31/48 (64%), Gaps = 1/48 (2%)
Frame = +3
Query: 492 LTAVHILVLDEADRMLDMGFEPQIRKIIEQI-RPDRQTLMWSAYLAQK 632
L + LV+DEADR+LDM F P + +I++ I +R T ++SA + K
Sbjct: 222 LRKLKFLVMDEADRLLDMEFGPVLDRILKIIPTQERTTYLFSATMTSK 269
Score = 37.5 bits (83), Expect = 0.30
Identities = 15/42 (35%), Positives = 25/42 (59%)
Frame = +3
Query: 66 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGV 191
F E N + Q K + Y +PTPIQ++ P A+ G +++G+
Sbjct: 83 FSELNLVPELIQACKNLNYSKPTPIQSKAIPPALEGHDIIGL 124
>UniRef50_P21372 Cluster: Pre-mRNA-processing ATP-dependent RNA
helicase PRP5; n=2; Saccharomyces cerevisiae|Rep:
Pre-mRNA-processing ATP-dependent RNA helicase PRP5 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 849
Score = 73.3 bits (172), Expect = 5e-12
Identities = 36/76 (47%), Positives = 48/76 (63%), Gaps = 1/76 (1%)
Frame = +1
Query: 250 QPPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHT-SYVRNTCVFGGAPKREQARDLER 426
Q P + GP+ L+LAPTRELA QI + F + +R+ C GG+ ++Q DL+R
Sbjct: 321 QRPLSKHETGPMGLILAPTRELALQIHEEVTKFTEADTSIRSVCCTGGSEMKKQITDLKR 380
Query: 427 GVEIVIATPGRLIDFL 474
G EIV+ATPGR ID L
Sbjct: 381 GTEIVVATPGRFIDIL 396
Score = 53.6 bits (123), Expect = 4e-06
Identities = 21/44 (47%), Positives = 34/44 (77%)
Frame = +3
Query: 501 VHILVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSAYLAQK 632
+ +V+DEADR+ D+GFEPQI +I++ +RPD+Q +++SA K
Sbjct: 409 ITFVVMDEADRLFDLGFEPQITQIMKTVRPDKQCVLFSATFPNK 452
>UniRef50_Q754U8 Cluster: Pre-mRNA-processing ATP-dependent RNA
helicase PRP5; n=2; Saccharomycetaceae|Rep:
Pre-mRNA-processing ATP-dependent RNA helicase PRP5 -
Ashbya gossypii (Yeast) (Eremothecium gossypii)
Length = 816
Score = 73.3 bits (172), Expect = 5e-12
Identities = 38/75 (50%), Positives = 49/75 (65%), Gaps = 2/75 (2%)
Frame = +1
Query: 277 GPIALVLAPTRELAQQIQQVAADF--GHTSYVRNTCVFGGAPKREQARDLERGVEIVIAT 450
GP+ L+L+PTRELA QI + F G S +R+ C GG+ + Q D++RGVEIVIAT
Sbjct: 311 GPLGLILSPTRELALQIHEEVTKFTSGDPS-IRSLCCTGGSELKRQINDIKRGVEIVIAT 369
Query: 451 PGRLIDFLEKGTTNL 495
PGR ID L + NL
Sbjct: 370 PGRFIDLLSLNSGNL 384
Score = 52.8 bits (121), Expect = 7e-06
Identities = 21/41 (51%), Positives = 33/41 (80%)
Frame = +3
Query: 510 LVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSAYLAQK 632
+V+DEADR+ D+GFEPQ+ +I++ IRPD+Q +++SA K
Sbjct: 393 VVMDEADRLFDLGFEPQVNQIMKCIRPDKQCVLFSATFPNK 433
Score = 34.3 bits (75), Expect = 2.8
Identities = 18/59 (30%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
Frame = +3
Query: 24 VTVSGVEVHNPIQYFEEANFPDYVQQGV-KTMGYKEPTPIQAQGWPIAMSGKNLVGVLK 197
V V G + PI + + + + + + + PTPIQAQ P MSG++++G+ K
Sbjct: 224 VQVRGRDCPRPILKWSQLGLNSGIMNLLTRELEFTVPTPIQAQAIPAIMSGRDVIGISK 282
>UniRef50_Q54Y81 Cluster: Putative RNA helicase; n=2; Dictyostelium
discoideum|Rep: Putative RNA helicase - Dictyostelium
discoideum AX4
Length = 834
Score = 72.9 bits (171), Expect = 7e-12
Identities = 37/79 (46%), Positives = 48/79 (60%)
Frame = +1
Query: 274 DGPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATP 453
DGP ALV+APTREL QQI++ +F R + GG +QA + +G EI+IATP
Sbjct: 488 DGPYALVMAPTRELVQQIEKETRNFAQHFGFRVVSLVGGQSIEDQAYQVSKGCEIIIATP 547
Query: 454 GRLIDFLEKGTTNLQRCTF 510
GRL D LEK L +C +
Sbjct: 548 GRLNDCLEKRYLVLNQCNY 566
Score = 52.8 bits (121), Expect = 7e-06
Identities = 18/56 (32%), Positives = 40/56 (71%)
Frame = +3
Query: 24 VTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGV 191
++ G NPI+ ++E+N P + + ++ +GY++P+PIQ Q PI+++G++++G+
Sbjct: 401 ISTKGGIAPNPIRTWQESNLPREILEAIRQLGYEKPSPIQMQSIPISLTGRDILGI 456
Score = 39.9 bits (89), Expect = 0.056
Identities = 17/40 (42%), Positives = 27/40 (67%)
Frame = +3
Query: 459 IN*FLGKGHNQLTAVHILVLDEADRMLDMGFEPQIRKIIE 578
+N L K + L + +VLDEAD M+D+GFEPQ+ +++
Sbjct: 550 LNDCLEKRYLVLNQCNYIVLDEADMMIDLGFEPQVTSVLD 589
>UniRef50_A0CUL6 Cluster: Chromosome undetermined scaffold_28, whole
genome shotgun sequence; n=4; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_28,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 604
Score = 72.9 bits (171), Expect = 7e-12
Identities = 37/58 (63%), Positives = 44/58 (75%)
Frame = +3
Query: 444 CYSR*IN*FLGKGHNQLTAVHILVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSA 617
C R I+ L +G L V LVLDEADRMLDMGFEPQIRKI++QIRP RQT+++SA
Sbjct: 261 CPGRLID-LLDQGCTTLKQVSFLVLDEADRMLDMGFEPQIRKIVDQIRPQRQTMLFSA 317
Score = 67.3 bits (157), Expect = 3e-10
Identities = 34/81 (41%), Positives = 47/81 (58%)
Frame = +1
Query: 268 RGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIA 447
R P L+LAPTREL QI F S + C++GG + Q L +G +I+IA
Sbjct: 201 RSHDPKCLILAPTRELTLQIYDQFQKFSVGSQLYAACLYGGQDRYIQKSQLRKGPQILIA 260
Query: 448 TPGRLIDFLEKGTTNLQRCTF 510
PGRLID L++G T L++ +F
Sbjct: 261 CPGRLIDLLDQGCTTLKQVSF 281
Score = 49.6 bits (113), Expect = 7e-05
Identities = 23/52 (44%), Positives = 33/52 (63%), Gaps = 1/52 (1%)
Frame = +3
Query: 39 VEVHNPIQYFEEAN-FPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGV 191
V V +PI FE+ FP + + G+K PT IQAQGW IA++G +L+G+
Sbjct: 126 VTVPDPIMRFEDVQCFPQMLMDLLLKAGFKGPTAIQAQGWSIALTGHDLIGI 177
Score = 37.9 bits (84), Expect = 0.23
Identities = 16/18 (88%), Positives = 18/18 (100%)
Frame = +2
Query: 194 QTGSGKTLAYILPAIVHI 247
QTGSGKTLA++LPAIVHI
Sbjct: 179 QTGSGKTLAFLLPAIVHI 196
>UniRef50_Q9Y7T7 Cluster: Pre-mRNA-splicing ATP-dependent RNA
helicase prp28; n=1; Schizosaccharomyces pombe|Rep:
Pre-mRNA-splicing ATP-dependent RNA helicase prp28 -
Schizosaccharomyces pombe (Fission yeast)
Length = 662
Score = 72.9 bits (171), Expect = 7e-12
Identities = 40/88 (45%), Positives = 51/88 (57%), Gaps = 3/88 (3%)
Frame = +1
Query: 256 PPIRRGD---GPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLER 426
PP+ + GP A+VLAPTRELAQQIQ F R V GG EQ+ + +
Sbjct: 315 PPLTESNMHLGPYAVVLAPTRELAQQIQVEGNKFAEPLGFRCVSVVGGHAFEEQSFQMSQ 374
Query: 427 GVEIVIATPGRLIDFLEKGTTNLQRCTF 510
G IV+ATPGRL+D LE+ L +CT+
Sbjct: 375 GAHIVVATPGRLLDCLERRLFVLSQCTY 402
Score = 48.4 bits (110), Expect = 2e-04
Identities = 18/59 (30%), Positives = 38/59 (64%)
Frame = +3
Query: 15 NHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGV 191
++ +++ G ++ NP++ +EEA P + + +K + YKEP+ IQ P+ + K+L+G+
Sbjct: 234 DYNISIKGDDLPNPLRNWEEAGLPSEMLKVLKKVNYKEPSSIQRAAIPVLLQRKDLIGI 292
Score = 38.3 bits (85), Expect = 0.17
Identities = 15/25 (60%), Positives = 20/25 (80%)
Frame = +3
Query: 510 LVLDEADRMLDMGFEPQIRKIIEQI 584
+V+DEADRMLDMGFE + KI+ +
Sbjct: 403 VVMDEADRMLDMGFEDDVNKILSSL 427
>UniRef50_Q65XX1 Cluster: Vasa-and belle-like helicase protein 1,
isoform c; n=4; Caenorhabditis|Rep: Vasa-and belle-like
helicase protein 1, isoform c - Caenorhabditis elegans
Length = 660
Score = 72.5 bits (170), Expect = 9e-12
Identities = 38/83 (45%), Positives = 50/83 (60%), Gaps = 1/83 (1%)
Frame = +1
Query: 265 RRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPK-REQARDLERGVEIV 441
RR P ALVL+PTRELA QI + A F + S ++ ++GG R+Q L G I+
Sbjct: 218 RRTYYPCALVLSPTRELAIQIHKEATKFSYKSNIQTAILYGGRENYRDQVNRLRAGTHIL 277
Query: 442 IATPGRLIDFLEKGTTNLQRCTF 510
IATPGRLID +E+G L C +
Sbjct: 278 IATPGRLIDIIEQGFIGLAGCRY 300
Score = 53.2 bits (122), Expect = 6e-06
Identities = 30/50 (60%), Positives = 33/50 (66%), Gaps = 3/50 (6%)
Frame = +3
Query: 477 KGHNQLTAVHILVLDEADRMLDMGFEPQIRKIIEQIRPD---RQTLMWSA 617
+G L LVLDEADRMLDMGFEPQIRKI+ Q P R T M+SA
Sbjct: 290 QGFIGLAGCRYLVLDEADRMLDMGFEPQIRKIVGQGMPPKTARTTAMFSA 339
Score = 44.4 bits (100), Expect = 0.003
Identities = 21/57 (36%), Positives = 31/57 (54%)
Frame = +3
Query: 15 NHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLV 185
N V VSG V I++F EA F V + V GY +PTP+Q P ++ ++L+
Sbjct: 124 NIPVEVSGDSVPAAIEHFNEAGFGPAVMENVNRSGYSKPTPVQKHSIPTLLANRDLM 180
>UniRef50_Q8I416 Cluster: ATP-dependent RNA helicase, putative; n=2;
Plasmodium|Rep: ATP-dependent RNA helicase, putative -
Plasmodium falciparum (isolate 3D7)
Length = 1490
Score = 72.1 bits (169), Expect = 1e-11
Identities = 37/95 (38%), Positives = 57/95 (60%), Gaps = 3/95 (3%)
Frame = +1
Query: 235 HCAHKQPPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQAR 414
H H++P +R DGPI+++L PTREL+ Q++ A + + V+GG+ Q +
Sbjct: 784 HVLHQEP--LRNNDGPISIILTPTRELSIQVKNEAKIYCKAVNIEILAVYGGSNIARQLK 841
Query: 415 DLERGVEIVIATPGRLIDFLEKG---TTNLQRCTF 510
L++GVEI++ TPGR+ID L TNL R +F
Sbjct: 842 VLKKGVEILVGTPGRIIDILTISNCKVTNLNRVSF 876
Score = 50.0 bits (114), Expect = 5e-05
Identities = 24/42 (57%), Positives = 29/42 (69%)
Frame = +3
Query: 492 LTAVHILVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSA 617
L V +VLDEADR+LD+GFE QI I+ R D+QT M SA
Sbjct: 871 LNRVSFVVLDEADRLLDLGFESQIYNILRNCRKDKQTAMISA 912
>UniRef50_A0RUV7 Cluster: Superfamily II helicase; n=3;
Thermoprotei|Rep: Superfamily II helicase - Cenarchaeum
symbiosum
Length = 434
Score = 72.1 bits (169), Expect = 1e-11
Identities = 35/82 (42%), Positives = 51/82 (62%)
Frame = +1
Query: 262 IRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIV 441
I+ G G L++APTRELA QI + F + VR ++GG Q L+RG EI+
Sbjct: 64 IKEGGGIQGLIVAPTRELAVQITEEVKKFAKYTKVRPVAIYGGQSMGVQLDALKRGAEIL 123
Query: 442 IATPGRLIDFLEKGTTNLQRCT 507
+ATPGRLID +++G+ ++ R T
Sbjct: 124 VATPGRLIDHIKRGSISIDRVT 145
Score = 35.9 bits (79), Expect = 0.92
Identities = 19/43 (44%), Positives = 27/43 (62%)
Frame = +3
Query: 477 KGHNQLTAVHILVLDEADRMLDMGFEPQIRKIIEQIRPDRQTL 605
+G + V LVLDEAD MLDMGF I+ I++ + PD + +
Sbjct: 136 RGSISIDRVTHLVLDEADTMLDMGFIDDIQFILD-LTPDEKVM 177
Score = 33.1 bits (72), Expect = 6.5
Identities = 13/41 (31%), Positives = 24/41 (58%)
Frame = +3
Query: 66 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVG 188
FEE V ++ MG+++ PIQ P+ ++G+++VG
Sbjct: 4 FEELGIKQNVLDALRDMGFEKAFPIQEAAIPVLLTGRDVVG 44
>UniRef50_A5E6W6 Cluster: ATP-dependent rRNA helicase RRP3; n=4;
Saccharomycetaceae|Rep: ATP-dependent rRNA helicase RRP3
- Lodderomyces elongisporus (Yeast) (Saccharomyces
elongisporus)
Length = 504
Score = 72.1 bits (169), Expect = 1e-11
Identities = 36/64 (56%), Positives = 44/64 (68%)
Frame = +1
Query: 286 ALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLI 465
ALVLAPTRELA QI++ G + +R+ C+ GG EQARDL R ++IATPGRLI
Sbjct: 169 ALVLAPTRELAFQIKETFDALGSSMGLRSVCIIGGMSMMEQARDLMRKPHVIIATPGRLI 228
Query: 466 DFLE 477
D LE
Sbjct: 229 DHLE 232
Score = 39.9 bits (89), Expect = 0.056
Identities = 16/45 (35%), Positives = 29/45 (64%)
Frame = +3
Query: 57 IQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGV 191
+Q F E + + + ++++ Y +PTPIQA P A+ GK++VG+
Sbjct: 97 VQSFTEFDLVPELLESIQSLKYTQPTPIQAAAIPHALQGKDIVGI 141
Score = 32.7 bits (71), Expect = 8.6
Identities = 16/48 (33%), Positives = 31/48 (64%), Gaps = 1/48 (2%)
Frame = +3
Query: 492 LTAVHILVLDEADRMLDMGFEPQIRKIIEQI-RPDRQTLMWSAYLAQK 632
L + LV+DE DRM+D+ + I +I++QI R T +++A ++++
Sbjct: 239 LKKLQYLVMDEVDRMIDLDYAKAIDQILKQIPSHQRITYLYTATMSRE 286
>UniRef50_A3AD37 Cluster: Putative uncharacterized protein; n=2;
Oryza sativa|Rep: Putative uncharacterized protein -
Oryza sativa subsp. japonica (Rice)
Length = 552
Score = 71.7 bits (168), Expect = 2e-11
Identities = 38/98 (38%), Positives = 51/98 (52%)
Frame = +1
Query: 217 GLHLASHCAHKQPPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAP 396
G+ H K + P LVL+PTRELAQQI V + G + + C++GG
Sbjct: 147 GVPALMHVRRKMGEKSAKKGVPRVLVLSPTRELAQQIADVLCEAGAPCGISSVCLYGGTS 206
Query: 397 KREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTF 510
K Q L+ GV+IVI TPGR+ D +E G L +F
Sbjct: 207 KGPQISALKSGVDIVIGTPGRMKDLIEMGICRLNDVSF 244
Score = 56.0 bits (129), Expect = 8e-07
Identities = 26/43 (60%), Positives = 33/43 (76%)
Frame = +3
Query: 489 QLTAVHILVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSA 617
+L V +VLDEADRMLDMGFEP++R I+ Q RQT+M+SA
Sbjct: 301 RLNDVSFVVLDEADRMLDMGFEPEVRAILSQTASVRQTVMFSA 343
Score = 48.0 bits (109), Expect = 2e-04
Identities = 23/62 (37%), Positives = 33/62 (53%)
Frame = +1
Query: 325 IQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRC 504
I V + G + + C++GG K Q L+ GV+IVI TPGR+ D +E G L
Sbjct: 246 IADVLCEAGAPCGISSVCLYGGTSKGPQISALKSGVDIVIGTPGRMKDLIEMGICRLNDV 305
Query: 505 TF 510
+F
Sbjct: 306 SF 307
Score = 36.3 bits (80), Expect = 0.70
Identities = 15/46 (32%), Positives = 24/46 (52%)
Frame = +3
Query: 54 PIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGV 191
P+ F P V K G++ P+PIQA WP + G++ +G+
Sbjct: 92 PLSSFAATALPPQVLDCCK--GFERPSPIQAYAWPYLLDGRDFIGI 135
>UniRef50_A4AFV6 Cluster: ATP-dependent RNA helicase; n=3;
Actinobacteria (class)|Rep: ATP-dependent RNA helicase -
marine actinobacterium PHSC20C1
Length = 757
Score = 71.3 bits (167), Expect = 2e-11
Identities = 34/77 (44%), Positives = 49/77 (63%)
Frame = +1
Query: 271 GDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIAT 450
G P AL+LAPTRELAQQI + + + T + GG P+ +Q L RGV+++IAT
Sbjct: 446 GRKPRALILAPTRELAQQIDRTIQPIARSVGLFTTTIVGGVPQYKQVAALTRGVDVIIAT 505
Query: 451 PGRLIDFLEKGTTNLQR 501
PGR+ D +E+G +L +
Sbjct: 506 PGRVEDLIEQGRLDLSQ 522
Score = 40.3 bits (90), Expect = 0.043
Identities = 19/49 (38%), Positives = 30/49 (61%)
Frame = +3
Query: 477 KGHNQLTAVHILVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSAYL 623
+G L+ V + VLDEAD M D+GF +++I+ + Q L++SA L
Sbjct: 515 QGRLDLSQVKVTVLDEADHMCDLGFLEPVQRILRETSEGGQKLLFSATL 563
>UniRef50_A3ZXX1 Cluster: ATP-dependent RNA helicase; n=2;
Planctomycetaceae|Rep: ATP-dependent RNA helicase -
Blastopirellula marina DSM 3645
Length = 447
Score = 71.3 bits (167), Expect = 2e-11
Identities = 35/74 (47%), Positives = 47/74 (63%)
Frame = +1
Query: 280 PIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGR 459
P LVL+PTRELA QI Q +G R T +FGG + Q R L+RGV + IATPGR
Sbjct: 70 PQVLVLSPTRELAVQIAQSFNVYGRNVKFRLTTIFGGVGQNPQVRALKRGVHVAIATPGR 129
Query: 460 LIDFLEKGTTNLQR 501
L+D +++G +L +
Sbjct: 130 LLDLMDQGYVDLSQ 143
Score = 50.4 bits (115), Expect = 4e-05
Identities = 22/54 (40%), Positives = 35/54 (64%)
Frame = +3
Query: 471 LGKGHNQLTAVHILVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSAYLAQK 632
+ +G+ L+ VLDEADRMLDMGF P ++ I+ ++ RQT+ ++A + K
Sbjct: 134 MDQGYVDLSQAKTFVLDEADRMLDMGFMPALKTIVSKLPKQRQTIFFTATMPPK 187
Score = 32.7 bits (71), Expect = 8.6
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = +3
Query: 93 VQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVG 188
+Q+ + T Y PTPIQ Q P + G +L+G
Sbjct: 7 IQEALATEKYHTPTPIQGQAIPHLLEGSDLIG 38
>UniRef50_Q9GNP1 Cluster: Vasa homolog; n=18; Eumetazoa|Rep: Vasa
homolog - Ciona savignyi (Pacific transparent sea
squirt)
Length = 770
Score = 71.3 bits (167), Expect = 2e-11
Identities = 35/77 (45%), Positives = 44/77 (57%)
Frame = +1
Query: 280 PIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGR 459
P A+V+ PTREL QI A F + VR +GG Q RDL+RG I+IATPGR
Sbjct: 391 PRAIVVGPTRELIYQIFLEARKFSRGTVVRPVVAYGGTSMNHQIRDLQRGCHILIATPGR 450
Query: 460 LIDFLEKGTTNLQRCTF 510
L+DF+ +G L F
Sbjct: 451 LMDFINRGLVGLDHVEF 467
Score = 50.8 bits (116), Expect = 3e-05
Identities = 27/54 (50%), Positives = 35/54 (64%), Gaps = 4/54 (7%)
Frame = +3
Query: 468 FLGKGHNQLTAVHILVLDEADRMLDMGFEPQIRKIIEQ----IRPDRQTLMWSA 617
F+ +G L V ++LDEADRMLDMGFE +IRK+ + DR TLM+SA
Sbjct: 454 FINRGLVGLDHVEFVILDEADRMLDMGFETEIRKLASSPGMPSKSDRHTLMFSA 507
Score = 41.5 bits (93), Expect = 0.019
Identities = 21/54 (38%), Positives = 28/54 (51%)
Frame = +3
Query: 24 VTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLV 185
V VSGV I FE A P+ V VK Y+ PTP+Q PI + ++L+
Sbjct: 301 VEVSGVNAPKSIPTFEVAGLPETVLANVKRANYERPTPVQKYSIPIINADRDLM 354
>UniRef50_O97031 Cluster: DjVLGA; n=1; Dugesia japonica|Rep: DjVLGA
- Dugesia japonica (Planarian)
Length = 726
Score = 71.3 bits (167), Expect = 2e-11
Identities = 34/67 (50%), Positives = 45/67 (67%)
Frame = +1
Query: 280 PIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGR 459
P+AL+LAPTRELA QI A F + S VR V+GG R Q +D+ +G +++ATPGR
Sbjct: 292 PVALILAPTRELAVQIYDEARKFSYRSLVRPCVVYGGRDIRGQLQDISQGCNMLVATPGR 351
Query: 460 LIDFLEK 480
L D LE+
Sbjct: 352 LSDMLER 358
Score = 58.8 bits (136), Expect = 1e-07
Identities = 31/46 (67%), Positives = 34/46 (73%), Gaps = 4/46 (8%)
Frame = +3
Query: 492 LTAVHILVLDEADRMLDMGFEPQIRKIIEQIR----PDRQTLMWSA 617
L + LVLDEADRMLDMGFEPQIRKI+EQ RQTLM+SA
Sbjct: 363 LDCIRYLVLDEADRMLDMGFEPQIRKIVEQTNMPPPGQRQTLMFSA 408
>UniRef50_Q5KME7 Cluster: Pre-mRNA-processing ATP-dependent RNA
helicase PRP5; n=1; Filobasidiella neoformans|Rep:
Pre-mRNA-processing ATP-dependent RNA helicase PRP5 -
Cryptococcus neoformans (Filobasidiella neoformans)
Length = 1072
Score = 71.3 bits (167), Expect = 2e-11
Identities = 35/87 (40%), Positives = 52/87 (59%), Gaps = 3/87 (3%)
Frame = +1
Query: 259 PIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEI 438
P+ +GPIA+V++PTRELA QI + F +R +C GG+ E +++G E+
Sbjct: 470 PVSGSEGPIAVVMSPTRELASQIYKECQPFLKVLNIRASCCVGGSSISEDIAAMKKGAEV 529
Query: 439 VIATPGRLIDFLEKG---TTNLQRCTF 510
VI TPGR+ID L TN++R T+
Sbjct: 530 VICTPGRMIDLLTANNGRVTNVRRTTY 556
Score = 67.7 bits (158), Expect = 2e-10
Identities = 58/206 (28%), Positives = 89/206 (43%), Gaps = 8/206 (3%)
Frame = +3
Query: 24 VTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVLKRV 203
+ + G + P++ + P +K G++ PT IQAQ P MSG++++G+ K
Sbjct: 391 IKIRGQDAPKPVRNWGAFGLPQGCLDVIKHQGWETPTSIQAQAIPAIMSGRDVIGIAKTG 450
Query: 204 PAKRWPTSCQPLCT*TTTAYSER*WSDCFGLGAYQRVSTTNSAS-----CCRFWTHILCS 368
K + L +R S G A T AS C F +
Sbjct: 451 SGK----TVAFLLPMLRHVRDQRPVSGSEGPIAVVMSPTRELASQIYKECQPFLKVLNIR 506
Query: 369 *HVCVWWCS*KRASPGLGEGSRNSHCYSR*IN*FLGKGHNQLTAVH---ILVLDEADRML 539
CV S + +G+ C + L + ++T V +V+DEADRM
Sbjct: 507 ASCCVGGSSISEDIAAMKKGAEVVICTPGRMIDLLTANNGRVTNVRRTTYIVMDEADRMF 566
Query: 540 DMGFEPQIRKIIEQIRPDRQTLMWSA 617
DMGFEPQ+ KII +RP Q +++SA
Sbjct: 567 DMGFEPQVMKIINNVRPSAQKVLFSA 592
>UniRef50_Q6C024 Cluster: Pre-mRNA-splicing ATP-dependent RNA
helicase PRP28; n=1; Yarrowia lipolytica|Rep:
Pre-mRNA-splicing ATP-dependent RNA helicase PRP28 -
Yarrowia lipolytica (Candida lipolytica)
Length = 575
Score = 67.7 bits (158), Expect(2) = 2e-11
Identities = 32/79 (40%), Positives = 48/79 (60%)
Frame = +1
Query: 274 DGPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATP 453
+GP L+LAPTRELA QI+ A F + V GG +EQA ++ G E+++ATP
Sbjct: 238 NGPYGLILAPTRELAMQIKDEAVKFCAPLGFKVVSVVGGYSAQEQALAVQEGAELIVATP 297
Query: 454 GRLIDFLEKGTTNLQRCTF 510
GRL+D +++ L +C +
Sbjct: 298 GRLLDVIDRRLLVLNQCCY 316
Score = 48.8 bits (111), Expect = 1e-04
Identities = 23/57 (40%), Positives = 34/57 (59%), Gaps = 1/57 (1%)
Frame = +3
Query: 24 VTVSGVEVHNPIQYFEEAN-FPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGV 191
VT G + NP++ + E P V+ + MGYKEPTPIQ PIA+ ++++GV
Sbjct: 150 VTKGGGNIPNPLRSWNECKEIPGIVRDTISRMGYKEPTPIQRAAIPIALGIRDVIGV 206
Score = 38.7 bits (86), Expect = 0.13
Identities = 14/25 (56%), Positives = 22/25 (88%)
Frame = +3
Query: 510 LVLDEADRMLDMGFEPQIRKIIEQI 584
+V+DEADRM+DMGFE Q++K++ +
Sbjct: 317 VVMDEADRMVDMGFEEQVQKVLASL 341
Score = 23.4 bits (48), Expect(2) = 2e-11
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = +1
Query: 232 SHCAHKQPPPIRRGDGPIAL 291
S +K+P PI+R PIAL
Sbjct: 179 SRMGYKEPTPIQRAAIPIAL 198
>UniRef50_UPI0000499D6F Cluster: DEAD/DEAH box helicase; n=1;
Entamoeba histolytica HM-1:IMSS|Rep: DEAD/DEAH box
helicase - Entamoeba histolytica HM-1:IMSS
Length = 585
Score = 70.9 bits (166), Expect = 3e-11
Identities = 37/78 (47%), Positives = 44/78 (56%)
Frame = +1
Query: 277 GPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPG 456
GP ALVLAPTRELA QIQ+ +R C GG P + Q +L G EIV+A PG
Sbjct: 252 GPYALVLAPTRELALQIQKETLKLATPFGLRVCCCIGGEPMQPQIEELSNGAEIVVAAPG 311
Query: 457 RLIDFLEKGTTNLQRCTF 510
RL D L + L +C F
Sbjct: 312 RLKDLLNQSYLVLGQCYF 329
Score = 35.1 bits (77), Expect = 1.6
Identities = 18/59 (30%), Positives = 34/59 (57%)
Frame = +3
Query: 15 NHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGV 191
N + V+ EV P++ +++ N D + +K + Y+ PTPIQ PIA+ ++L+ +
Sbjct: 162 NLNIFVNNNEVIKPLRKWDDMNVCDDLLLLIKNI-YENPTPIQCASIPIALKMRDLIAL 219
Score = 34.7 bits (76), Expect = 2.1
Identities = 14/38 (36%), Positives = 25/38 (65%)
Frame = +3
Query: 471 LGKGHNQLTAVHILVLDEADRMLDMGFEPQIRKIIEQI 584
L + + L + +VLDEAD+M+D+G + Q+R I ++
Sbjct: 317 LNQSYLVLGQCYFVVLDEADKMIDLGLDVQVRYIFSEL 354
>UniRef50_Q0FAJ4 Cluster: Dead-box ATP-dependent RNA helicase; n=6;
Alphaproteobacteria|Rep: Dead-box ATP-dependent RNA
helicase - alpha proteobacterium HTCC2255
Length = 531
Score = 70.9 bits (166), Expect = 3e-11
Identities = 35/81 (43%), Positives = 49/81 (60%)
Frame = +1
Query: 268 RGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIA 447
+G A++L+PTRELA QI + FG + T GGAP R+Q RDL +GV+I++A
Sbjct: 173 KGRSARAIILSPTRELALQIHEAFVSFGKRLPLNFTHAIGGAPIRKQMRDLSKGVDILVA 232
Query: 448 TPGRLIDFLEKGTTNLQRCTF 510
TPGRL D +++ L F
Sbjct: 233 TPGRLEDLVDQKGLRLDETKF 253
Score = 54.0 bits (124), Expect = 3e-06
Identities = 23/48 (47%), Positives = 37/48 (77%)
Frame = +3
Query: 489 QLTAVHILVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSAYLAQK 632
+L LVLDEAD+MLD+GF P +++II ++ DRQTL++SA ++++
Sbjct: 247 RLDETKFLVLDEADQMLDIGFLPAVKRIISKVNKDRQTLLFSATMSKE 294
Score = 33.1 bits (72), Expect = 6.5
Identities = 13/26 (50%), Positives = 19/26 (73%)
Frame = +3
Query: 114 MGYKEPTPIQAQGWPIAMSGKNLVGV 191
+GY PTPIQ+Q P ++ K+LVG+
Sbjct: 121 LGYTLPTPIQSQAIPAVLNSKDLVGL 146
>UniRef50_Q4W7T8 Cluster: VASA RNA helicase; n=1; Artemia
franciscana|Rep: VASA RNA helicase - Artemia
sanfranciscana (Brine shrimp) (Artemia franciscana)
Length = 726
Score = 70.9 bits (166), Expect = 3e-11
Identities = 32/77 (41%), Positives = 47/77 (61%)
Frame = +1
Query: 280 PIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGR 459
P A+V+ PTRELA QI + A F + + ++ V+GG R Q+ ++ G I++ TPGR
Sbjct: 382 PEAVVMCPTRELAIQIFKEAVKFSYDTIIKPVVVYGGVAPRYQSDKVKSGCNILVGTPGR 441
Query: 460 LIDFLEKGTTNLQRCTF 510
LIDF+ +G N C F
Sbjct: 442 LIDFMNRGVFNFSACKF 458
Score = 48.8 bits (111), Expect = 1e-04
Identities = 24/54 (44%), Positives = 36/54 (66%), Gaps = 4/54 (7%)
Frame = +3
Query: 468 FLGKGHNQLTAVHILVLDEADRMLDMGFEPQIRKIIEQ----IRPDRQTLMWSA 617
F+ +G +A LVLDEADRMLDMGF +++K++ ++ +R TLM+SA
Sbjct: 445 FMNRGVFNFSACKFLVLDEADRMLDMGFMGEVKKVVYHGTMPVKVERNTLMFSA 498
Score = 35.1 bits (77), Expect = 1.6
Identities = 16/58 (27%), Positives = 29/58 (50%)
Frame = +3
Query: 12 NNHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLV 185
+N V+G + + I F+ A + +K GY +PTP+Q P+ M ++L+
Sbjct: 288 SNVAAKVTGEGLPSGIDSFDAAGLRPKILDNIKKSGYTQPTPVQKWAIPVIMKKRDLM 345
>UniRef50_Q4UA43 Cluster: DEAD-family helicase, putative; n=3;
Piroplasmida|Rep: DEAD-family helicase, putative -
Theileria annulata
Length = 757
Score = 70.9 bits (166), Expect = 3e-11
Identities = 35/79 (44%), Positives = 46/79 (58%)
Frame = +1
Query: 274 DGPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATP 453
DGP AL+LAP+RELA QI F R+ V GG QA +L +G EI+I TP
Sbjct: 414 DGPYALILAPSRELALQIYDETVKFSAFCSCRSVAVVGGRNAESQAFELRKGCEIIIGTP 473
Query: 454 GRLIDFLEKGTTNLQRCTF 510
GR+ D L++ T L +C +
Sbjct: 474 GRVKDCLDRAYTVLSQCNY 492
Score = 47.2 bits (107), Expect = 4e-04
Identities = 21/57 (36%), Positives = 35/57 (61%)
Frame = +3
Query: 21 EVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGV 191
E+ + G V PI+ + E+ P + + +K GY +PTPIQ Q PIA+ ++L+G+
Sbjct: 326 EIYIKGGRVPPPIRTWAESPLPWELLEAIKKAGYIKPTPIQMQAIPIALEMRDLIGI 382
Score = 38.3 bits (85), Expect = 0.17
Identities = 16/38 (42%), Positives = 27/38 (71%)
Frame = +3
Query: 471 LGKGHNQLTAVHILVLDEADRMLDMGFEPQIRKIIEQI 584
L + + L+ + ++LDEADRM+DMGFE ++ I++ I
Sbjct: 480 LDRAYTVLSQCNYVILDEADRMIDMGFEDVLKYILDCI 517
>UniRef50_Q388E8 Cluster: ATP-dependent DEAD/H RNA helicase,
putative; n=3; Trypanosoma|Rep: ATP-dependent DEAD/H RNA
helicase, putative - Trypanosoma brucei
Length = 660
Score = 70.9 bits (166), Expect = 3e-11
Identities = 37/87 (42%), Positives = 49/87 (56%), Gaps = 2/87 (2%)
Frame = +1
Query: 256 PPIRRGD--GPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERG 429
PP G P AL+LAPTREL+ QI A F + + VR V+GGA R Q +L RG
Sbjct: 227 PPYSPGSHSSPQALILAPTRELSLQIYGEARKFTYHTPVRCVVVYGGADPRHQVHELSRG 286
Query: 430 VEIVIATPGRLIDFLEKGTTNLQRCTF 510
++++ATPGRL+D +G F
Sbjct: 287 CKLLVATPGRLMDMFSRGYVRFSEIRF 313
Score = 53.2 bits (122), Expect = 6e-06
Identities = 27/53 (50%), Positives = 37/53 (69%), Gaps = 6/53 (11%)
Frame = +3
Query: 477 KGHNQLTAVHILVLDEADRMLDMGFEPQIRKIIEQIRPD------RQTLMWSA 617
+G+ + + + L+LDEADRMLDMGFEPQIR I++ D RQTL++SA
Sbjct: 303 RGYVRFSEIRFLILDEADRMLDMGFEPQIRMIVQGPDSDMPRAGQRQTLLYSA 355
Score = 39.1 bits (87), Expect = 0.099
Identities = 16/44 (36%), Positives = 27/44 (61%)
Frame = +3
Query: 54 PIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLV 185
P+ F E N + + VK GY +PTP+Q+ G P A++ ++L+
Sbjct: 155 PVLSFSEMNMVPVLLENVKRCGYTKPTPVQSLGIPTALNHRDLM 198
>UniRef50_UPI0000E48294 Cluster: PREDICTED: similar to DEAD
(Asp-Glu-Ala-Asp) box polypeptide 21a; n=1;
Strongylocentrotus purpuratus|Rep: PREDICTED: similar to
DEAD (Asp-Glu-Ala-Asp) box polypeptide 21a -
Strongylocentrotus purpuratus
Length = 657
Score = 70.5 bits (165), Expect = 3e-11
Identities = 32/81 (39%), Positives = 50/81 (61%)
Frame = +1
Query: 259 PIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEI 438
P + G PI L LAPTRELA+QI + G ++ TC++GG Q + RG+++
Sbjct: 168 PQKSGRQPIILALAPTRELAKQISEYFEAIG--PHLSTTCIYGGTSYWPQESAIRRGLDV 225
Query: 439 VIATPGRLIDFLEKGTTNLQR 501
V+ TPGR++D++ K T +L +
Sbjct: 226 VVGTPGRILDYIRKNTLDLSK 246
Score = 36.3 bits (80), Expect = 0.70
Identities = 21/56 (37%), Positives = 33/56 (58%), Gaps = 6/56 (10%)
Frame = +3
Query: 468 FLGKGHNQLTAVHILVLDEADRMLDMGFEPQIRKII------EQIRPDRQTLMWSA 617
++ K L+ + +VLDE DRMLDMGF + +I+ E+ + QTL++SA
Sbjct: 236 YIRKNTLDLSKLKHVVLDEVDRMLDMGFAESVEEILGAAYKTEEAPNNPQTLLFSA 291
>UniRef50_Q87HW1 Cluster: ATP-dependent RNA helicase, DEAD box
family; n=6; Vibrio|Rep: ATP-dependent RNA helicase,
DEAD box family - Vibrio parahaemolyticus
Length = 421
Score = 70.5 bits (165), Expect = 3e-11
Identities = 34/79 (43%), Positives = 46/79 (58%)
Frame = +1
Query: 265 RRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVI 444
+R P AL+L PTRELAQQ+ + + +R CV+GG Q LE G +I+I
Sbjct: 73 KRNGTPHALILVPTRELAQQVFDNLTQYAEHTDLRIVCVYGGTSIGVQKNKLEEGADILI 132
Query: 445 ATPGRLIDFLEKGTTNLQR 501
ATPGRL+D L G N+ +
Sbjct: 133 ATPGRLLDHLFNGNVNISK 151
Score = 51.2 bits (117), Expect = 2e-05
Identities = 22/49 (44%), Positives = 36/49 (73%)
Frame = +3
Query: 471 LGKGHNQLTAVHILVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSA 617
L G+ ++ +LVLDEADRMLDMGF P +++I+ ++ D+Q +++SA
Sbjct: 142 LFNGNVNISKTGVLVLDEADRMLDMGFWPDLQRILRRLPNDKQIMLFSA 190
>UniRef50_Q18W60 Cluster: DEAD/DEAH box helicase-like; n=2;
Desulfitobacterium hafniense|Rep: DEAD/DEAH box
helicase-like - Desulfitobacterium hafniense (strain
DCB-2)
Length = 425
Score = 70.5 bits (165), Expect = 3e-11
Identities = 33/70 (47%), Positives = 47/70 (67%)
Frame = +1
Query: 286 ALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLI 465
ALVLAPTRELA QI + +G +R +FGG + Q R LE+G++I++ATPGRL+
Sbjct: 78 ALVLAPTRELATQIAESFTAYGVNLPLRTLVIFGGVGQAPQTRKLEKGIDILVATPGRLL 137
Query: 466 DFLEKGTTNL 495
D + +G +L
Sbjct: 138 DLINQGFIDL 147
Score = 41.1 bits (92), Expect = 0.024
Identities = 19/49 (38%), Positives = 31/49 (63%)
Frame = +3
Query: 471 LGKGHNQLTAVHILVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSA 617
+ +G L+ V VLDE D+MLDMG +++II + +RQ +++SA
Sbjct: 140 INQGFIDLSHVEHFVLDETDQMLDMGMLHDVKRIITYLPRERQNMLFSA 188
Score = 32.7 bits (71), Expect = 8.6
Identities = 13/32 (40%), Positives = 20/32 (62%)
Frame = +3
Query: 93 VQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVG 188
+Q+ + GY E TPIQA+ P + G +L+G
Sbjct: 12 IQKALAAQGYSEATPIQAEAIPHLLEGLDLLG 43
>UniRef50_Q5CWJ1 Cluster: Nucleolar protein GU2. eIF4A-1-family. RNA
SFII helicase; n=3; Cryptosporidium|Rep: Nucleolar
protein GU2. eIF4A-1-family. RNA SFII helicase -
Cryptosporidium parvum Iowa II
Length = 738
Score = 70.5 bits (165), Expect = 3e-11
Identities = 31/81 (38%), Positives = 51/81 (62%)
Frame = +1
Query: 259 PIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEI 438
P + G P+ LVL PTRELAQQ+ + V+GG+P+ Q +++++GV+I
Sbjct: 134 PNKHGRRPLVLVLLPTRELAQQVSNEFELMKGKDRYKVCSVYGGSPEYPQIQEIKKGVDI 193
Query: 439 VIATPGRLIDFLEKGTTNLQR 501
V+ PGR++DF+E+G N+ +
Sbjct: 194 VVGCPGRVLDFIERGILNVSK 214
Score = 41.9 bits (94), Expect = 0.014
Identities = 17/42 (40%), Positives = 30/42 (71%)
Frame = +3
Query: 468 FLGKGHNQLTAVHILVLDEADRMLDMGFEPQIRKIIEQIRPD 593
F+ +G ++ + +L LDEAD+ML+MGF+ + KII+ +R +
Sbjct: 204 FIERGILNVSKISVLTLDEADKMLEMGFKETVDKIIDCVRKE 245
Score = 32.7 bits (71), Expect = 8.6
Identities = 14/44 (31%), Positives = 24/44 (54%)
Frame = +2
Query: 107 KDNGLQRTDAYSSSRLADSYVWKEFSWRTQTGSGKTLAYILPAI 238
+ G++R + Y K+ + +TG+GKTLA++LP I
Sbjct: 80 RSRGIERLFPIQAQSFESIYGKKDVLGKAKTGTGKTLAFVLPVI 123
>UniRef50_Q4JG17 Cluster: Vasa-like protein; n=1; Litopenaeus
vannamei|Rep: Vasa-like protein - Penaeus vannamei
(Penoeid shrimp) (European white shrimp)
Length = 703
Score = 70.5 bits (165), Expect = 3e-11
Identities = 33/68 (48%), Positives = 43/68 (63%)
Frame = +1
Query: 280 PIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGR 459
P LV+ PTRELA QI + A F H+S + +GGA Q + + G I++ATPGR
Sbjct: 339 PTGLVICPTRELAIQIMREARKFSHSSVAKCCVAYGGAAGFHQLKTIHSGCHILVATPGR 398
Query: 460 LIDFLEKG 483
L+DFLEKG
Sbjct: 399 LLDFLEKG 406
Score = 44.4 bits (100), Expect = 0.003
Identities = 27/54 (50%), Positives = 36/54 (66%), Gaps = 4/54 (7%)
Frame = +3
Query: 468 FLGKGHNQLTAVHILVLDEADRMLDMGFEPQIRKII--EQIRP--DRQTLMWSA 617
FL KG +++ LVLDEADRMLDMGF I+ +I + + P +R TLM+SA
Sbjct: 402 FLEKGKIVFSSLKYLVLDEADRMLDMGFLSSIKTVINHKTMTPTAERITLMFSA 455
>UniRef50_Q4P7Y2 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 568
Score = 70.5 bits (165), Expect = 3e-11
Identities = 37/78 (47%), Positives = 46/78 (58%)
Frame = +1
Query: 277 GPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPG 456
GP AL+L PTRELAQQI+ F +R + GG +QA L G EIVIATPG
Sbjct: 343 GPQALILVPTRELAQQIETETNKFAGRLGLRCVSIVGGRDMNDQAYALRDGAEIVIATPG 402
Query: 457 RLIDFLEKGTTNLQRCTF 510
RL D +E+ L +CT+
Sbjct: 403 RLKDCIERHVLVLSQCTY 420
Score = 47.6 bits (108), Expect = 3e-04
Identities = 17/56 (30%), Positives = 34/56 (60%)
Frame = +3
Query: 24 VTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGV 191
++ G + P++ + E+ P + ++ +GYKEP+PIQ Q PI + ++L+G+
Sbjct: 255 ISARGGNIPKPLRSWRESGIPASILSTIEEVGYKEPSPIQRQAIPIGLQNRDLIGI 310
Score = 38.7 bits (86), Expect = 0.13
Identities = 14/25 (56%), Positives = 22/25 (88%)
Frame = +3
Query: 510 LVLDEADRMLDMGFEPQIRKIIEQI 584
+V+DEAD+M+DMGFEPQ+ I++ +
Sbjct: 421 VVMDEADKMVDMGFEPQVNFILDSL 445
>UniRef50_Q5FS73 Cluster: ATP-dependent RNA helicase; n=2;
Gluconobacter oxydans|Rep: ATP-dependent RNA helicase -
Gluconobacter oxydans (Gluconobacter suboxydans)
Length = 432
Score = 70.1 bits (164), Expect = 5e-11
Identities = 34/76 (44%), Positives = 46/76 (60%)
Frame = +1
Query: 274 DGPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATP 453
+G LVLAPTREL QI F VR T +FGG + Q + LE GV+I++A P
Sbjct: 79 NGARVLVLAPTRELVSQIADGFESFSRHQPVRVTTIFGGVSQVHQVKALEEGVDIIVAAP 138
Query: 454 GRLIDFLEKGTTNLQR 501
GRL+D +E+G +L +
Sbjct: 139 GRLLDLIEQGLCDLSQ 154
Score = 46.8 bits (106), Expect = 5e-04
Identities = 22/47 (46%), Positives = 32/47 (68%)
Frame = +3
Query: 477 KGHNQLTAVHILVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSA 617
+G L+ + LVLDEAD+MLDMGF I +I+ + DR T+++SA
Sbjct: 147 QGLCDLSQLETLVLDEADQMLDMGFAKPIERIVATLPEDRHTVLFSA 193
Score = 35.5 bits (78), Expect = 1.2
Identities = 15/44 (34%), Positives = 26/44 (59%)
Frame = +3
Query: 60 QYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGV 191
Q F + + + + GY +PTPIQAQ P+ + G++L+G+
Sbjct: 7 QAFADLALAPTLLRALDEAGYVKPTPIQAQSIPLLLEGRDLLGL 50
>UniRef50_Q087U7 Cluster: DEAD/DEAH box helicase domain protein;
n=5; Gammaproteobacteria|Rep: DEAD/DEAH box helicase
domain protein - Shewanella frigidimarina (strain NCIMB
400)
Length = 421
Score = 70.1 bits (164), Expect = 5e-11
Identities = 38/87 (43%), Positives = 48/87 (55%), Gaps = 1/87 (1%)
Frame = +1
Query: 250 QPPPIRRGDGPI-ALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLER 426
QP PI ALVL PTRELAQQ+ + + S V + V+GG EQ R L
Sbjct: 73 QPDTQHINSTPITALVLVPTRELAQQVHSSIEQYAYGSSVTSVMVYGGVSIGEQIRQLAN 132
Query: 427 GVEIVIATPGRLIDFLEKGTTNLQRCT 507
G I++ATPGRL+D L K +L + T
Sbjct: 133 GTHILVATPGRLLDLLRKRALSLSQLT 159
Score = 47.2 bits (107), Expect = 4e-04
Identities = 21/38 (55%), Positives = 31/38 (81%)
Frame = +3
Query: 510 LVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSAYL 623
LV DEADRMLDMGF+ +I ++++++ RQTL++SA L
Sbjct: 161 LVFDEADRMLDMGFKDEIVEVLKRLPSTRQTLLFSATL 198
>UniRef50_A4EAF2 Cluster: Putative uncharacterized protein; n=1;
Collinsella aerofaciens ATCC 25986|Rep: Putative
uncharacterized protein - Collinsella aerofaciens ATCC
25986
Length = 749
Score = 70.1 bits (164), Expect = 5e-11
Identities = 37/80 (46%), Positives = 50/80 (62%), Gaps = 1/80 (1%)
Frame = +1
Query: 259 PIRRGDGPIALVLAPTRELAQQIQQVAADFGH-TSYVRNTCVFGGAPKREQARDLERGVE 435
P G GP+ LV+ PTRELAQQI +VA T +V T V GG + Q L+ G +
Sbjct: 132 PEGNGRGPVMLVITPTRELAQQIDEVAGKIADVTGHVAVTVV-GGVSYKPQTAALKYGCD 190
Query: 436 IVIATPGRLIDFLEKGTTNL 495
I++ATPGRL+D +E+G +L
Sbjct: 191 ILVATPGRLVDLIEQGACHL 210
Score = 57.6 bits (133), Expect = 3e-07
Identities = 27/52 (51%), Positives = 38/52 (73%)
Frame = +3
Query: 477 KGHNQLTAVHILVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSAYLAQK 632
+G L V +LVLDEADRMLDMGF P +R+I+ + +RQTL++SA L ++
Sbjct: 205 QGACHLDEVKVLVLDEADRMLDMGFLPAVRRIVRETPAERQTLLFSATLDEE 256
Score = 37.9 bits (84), Expect = 0.23
Identities = 13/40 (32%), Positives = 25/40 (62%)
Frame = +3
Query: 66 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLV 185
F+E D + + ++ +GY PTP+QA P+ + G++L+
Sbjct: 48 FDELGLSDEMLRAIENLGYTAPTPVQAGSIPVVLEGRDLL 87
>UniRef50_A4RW46 Cluster: Predicted protein; n=2; Ostreococcus|Rep:
Predicted protein - Ostreococcus lucimarinus CCE9901
Length = 654
Score = 70.1 bits (164), Expect = 5e-11
Identities = 34/81 (41%), Positives = 50/81 (61%)
Frame = +1
Query: 268 RGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIA 447
+G P+ +VLAPTRELA+Q+ G++ ++ CV+GG P REQ L G ++VI
Sbjct: 159 QGRRPMCVVLAPTRELAKQVFADFDWIGNSFGFKSVCVYGGTPYREQEMGLRGGCDVVIG 218
Query: 448 TPGRLIDFLEKGTTNLQRCTF 510
TPGR+ D LE+ T + + F
Sbjct: 219 TPGRMKDHLERKTLMMDKLKF 239
Score = 35.1 bits (77), Expect = 1.6
Identities = 19/37 (51%), Positives = 25/37 (67%)
Frame = +3
Query: 513 VLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSAYL 623
VLDEAD ML+MGF + I++ D QTL++SA L
Sbjct: 241 VLDEADEMLNMGFVDDVELILKS-SGDVQTLLFSATL 276
>UniRef50_Q6MN50 Cluster: ATP-dependent RNA helicase; n=1;
Bdellovibrio bacteriovorus|Rep: ATP-dependent RNA
helicase - Bdellovibrio bacteriovorus
Length = 656
Score = 69.7 bits (163), Expect = 6e-11
Identities = 35/71 (49%), Positives = 45/71 (63%)
Frame = +1
Query: 286 ALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLI 465
ALVL+PTRELA Q+ + G VR ++GGA R Q ++RG IV+ATPGRL+
Sbjct: 116 ALVLSPTRELALQVAEQLTLLGKKKGVRVVTIYGGASYRTQIDGIKRGAHIVVATPGRLV 175
Query: 466 DFLEKGTTNLQ 498
DFLE+ LQ
Sbjct: 176 DFLEQKMIKLQ 186
Score = 37.5 bits (83), Expect = 0.30
Identities = 18/42 (42%), Positives = 26/42 (61%)
Frame = +3
Query: 468 FLGKGHNQLTAVHILVLDEADRMLDMGFEPQIRKIIEQIRPD 593
FL + +L +V +VLDEAD ML MGF+ + I+ +PD
Sbjct: 177 FLEQKMIKLQSVKTVVLDEADEMLSMGFKEALETILSATQPD 218
Score = 33.1 bits (72), Expect = 6.5
Identities = 15/41 (36%), Positives = 20/41 (48%)
Frame = +3
Query: 57 IQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKN 179
+ FE V + MG+ PTPIQ Q PI ++G N
Sbjct: 43 VDNFESFGLSAPVMAAMADMGFTTPTPIQRQALPILLAGAN 83
>UniRef50_A0Z0M4 Cluster: ATP-dependent RNA helicase; n=1; marine
gamma proteobacterium HTCC2080|Rep: ATP-dependent RNA
helicase - marine gamma proteobacterium HTCC2080
Length = 582
Score = 69.7 bits (163), Expect = 6e-11
Identities = 34/73 (46%), Positives = 47/73 (64%), Gaps = 1/73 (1%)
Frame = +1
Query: 280 PIALVLAPTRELAQQIQQVAADFGH-TSYVRNTCVFGGAPKREQARDLERGVEIVIATPG 456
P ALVL PTRELAQQ+ + +G +R +FGGA R+Q + L G IV+ATPG
Sbjct: 78 PQALVLCPTRELAQQVAEAFRSYGRGMGGLRILSIFGGADMRQQLKSLREGTHIVVATPG 137
Query: 457 RLIDFLEKGTTNL 495
RL+D +E+ + +L
Sbjct: 138 RLLDHIERRSIDL 150
Score = 42.3 bits (95), Expect = 0.011
Identities = 15/42 (35%), Positives = 29/42 (69%)
Frame = +3
Query: 66 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGV 191
F PD++Q+ ++++GY+ TPIQA P+ + G+++VG+
Sbjct: 11 FNSLGLPDFLQENLQSLGYETATPIQAGTIPLLLEGRDVVGL 52
Score = 37.9 bits (84), Expect = 0.23
Identities = 17/47 (36%), Positives = 30/47 (63%)
Frame = +3
Query: 492 LTAVHILVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSAYLAQK 632
LT ++ +VLDEAD ML MGF + I+ + +R+ ++SA + ++
Sbjct: 150 LTGINAVVLDEADEMLRMGFIDDVDTILAKTPKERKVALFSATMPKR 196
>UniRef50_Q0G0P8 Cluster: Superfamily II DNA and RNA helicase; n=2;
Aurantimonadaceae|Rep: Superfamily II DNA and RNA
helicase - Fulvimarina pelagi HTCC2506
Length = 457
Score = 69.3 bits (162), Expect = 8e-11
Identities = 33/71 (46%), Positives = 48/71 (67%)
Frame = +1
Query: 286 ALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLI 465
AL+L+PTRELA QI + AD + + + VFGG R Q + L RGV+I++ATPGRL+
Sbjct: 80 ALILSPTRELAVQIAESIADLSEGTPISHCVVFGGVSVRPQIQALARGVDILVATPGRLL 139
Query: 466 DFLEKGTTNLQ 498
D +E+ +L+
Sbjct: 140 DLMEQRAIDLR 150
Score = 47.2 bits (107), Expect = 4e-04
Identities = 21/36 (58%), Positives = 28/36 (77%)
Frame = +3
Query: 510 LVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSA 617
L+LDEADRMLDMGF + KI+ + DRQ++M+SA
Sbjct: 155 LILDEADRMLDMGFVRDVMKIVGKCPDDRQSMMFSA 190
>UniRef50_Q01PH0 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Solibacter usitatus Ellin6076|Rep: DEAD/DEAH box
helicase domain protein - Solibacter usitatus (strain
Ellin6076)
Length = 422
Score = 69.3 bits (162), Expect = 8e-11
Identities = 34/76 (44%), Positives = 43/76 (56%)
Frame = +1
Query: 268 RGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIA 447
R G AL+L PTRELA QI + + +R GG +R Q RD+ G IV+A
Sbjct: 69 RQPGVRALILTPTRELALQINEALLQIARGTGIRAAVAVGGLNERSQLRDIRGGANIVVA 128
Query: 448 TPGRLIDFLEKGTTNL 495
TPGRL DF+ +G NL
Sbjct: 129 TPGRLYDFMSRGLINL 144
Score = 60.1 bits (139), Expect = 5e-08
Identities = 28/52 (53%), Positives = 39/52 (75%)
Frame = +3
Query: 468 FLGKGHNQLTAVHILVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSAYL 623
F+ +G LT V +L+LDE+DRMLDMGF P I++II + +RQTL++SA L
Sbjct: 136 FMSRGLINLTTVRMLILDESDRMLDMGFLPTIKRIIAAMPAERQTLLFSATL 187
>UniRef50_A7CSF3 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Opitutaceae bacterium TAV2|Rep: DEAD/DEAH box
helicase domain protein - Opitutaceae bacterium TAV2
Length = 343
Score = 69.3 bits (162), Expect = 8e-11
Identities = 34/71 (47%), Positives = 45/71 (63%)
Frame = +1
Query: 268 RGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIA 447
R GP LVL PTREL Q++ DFG + VR+T + GG +Q DL G +IVIA
Sbjct: 67 RPGGPRVLVLEPTRELGAQVETAFRDFGRFTDVRSTIIHGGVGYGKQRSDLRAGTDIVIA 126
Query: 448 TPGRLIDFLEK 480
T GRL+DF+++
Sbjct: 127 TVGRLMDFIKE 137
Score = 47.6 bits (108), Expect = 3e-04
Identities = 22/50 (44%), Positives = 33/50 (66%)
Frame = +3
Query: 468 FLGKGHNQLTAVHILVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSA 617
F+ + +L +V +L+LDE DRMLDMGF +++I+ RQTL +SA
Sbjct: 134 FIKEKEIRLDSVEVLILDEVDRMLDMGFINDVKRIVGLCPKQRQTLFFSA 183
Score = 41.9 bits (94), Expect = 0.014
Identities = 15/40 (37%), Positives = 27/40 (67%)
Frame = +3
Query: 66 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLV 185
F + P + +GV+ MGY +PTP+Q + P+ ++G++LV
Sbjct: 3 FSKLGLPSSLVRGVQAMGYVDPTPVQLRAIPVVLAGRDLV 42
>UniRef50_Q4Z5Q6 Cluster: ATP-dependent RNA helicase, putative; n=4;
Plasmodium (Vinckeia)|Rep: ATP-dependent RNA helicase,
putative - Plasmodium berghei
Length = 1312
Score = 69.3 bits (162), Expect = 8e-11
Identities = 37/98 (37%), Positives = 56/98 (57%), Gaps = 3/98 (3%)
Frame = +1
Query: 226 LASHCAHKQPPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKRE 405
L H H+ +R DGPI ++L PTREL+ Q++ A+ + ++ V+GG+
Sbjct: 627 LIRHVLHQDK--LRNNDGPIGIILTPTRELSIQVKNEASIYCKAVDLKILAVYGGSNIGA 684
Query: 406 QARDLERGVEIVIATPGRLIDFL---EKGTTNLQRCTF 510
Q L++GVEI++ TPGR+ID L TNL R +F
Sbjct: 685 QLNVLKKGVEIIVGTPGRIIDILTISNSKVTNLNRASF 722
Score = 49.6 bits (113), Expect = 7e-05
Identities = 23/42 (54%), Positives = 28/42 (66%)
Frame = +3
Query: 492 LTAVHILVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSA 617
L +VLDEADR+LD+GFE QI I+ R D+QT M SA
Sbjct: 717 LNRASFIVLDEADRLLDLGFESQIHSILNNCRKDKQTAMISA 758
>UniRef50_A4V6K8 Cluster: Putative RNA helicase protein; n=1;
Dugesia japonica|Rep: Putative RNA helicase protein -
Dugesia japonica (Planarian)
Length = 515
Score = 69.3 bits (162), Expect = 8e-11
Identities = 34/75 (45%), Positives = 44/75 (58%)
Frame = +1
Query: 280 PIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGR 459
P+ LVLAPTREL QI VA +++R+ V GG R Q D RG +IATPGR
Sbjct: 178 PLLLVLAPTRELVNQITSVAKTLLKLTHLRSVSVIGGVDARSQINDASRGCHALIATPGR 237
Query: 460 LIDFLEKGTTNLQRC 504
L D ++G +L+ C
Sbjct: 238 LKDLTDRGIFSLKYC 252
Score = 48.4 bits (110), Expect = 2e-04
Identities = 25/38 (65%), Positives = 29/38 (76%), Gaps = 2/38 (5%)
Frame = +3
Query: 510 LVLDEADRMLDMGFEPQIRKIIEQIR--PDRQTLMWSA 617
LV+DEADRMLDMGFEPQIR+II + R T M+SA
Sbjct: 255 LVIDEADRMLDMGFEPQIREIINNLPSVSKRHTSMFSA 292
>UniRef50_Q9C551 Cluster: DEAD-box ATP-dependent RNA helicase 5;
n=4; Magnoliophyta|Rep: DEAD-box ATP-dependent RNA
helicase 5 - Arabidopsis thaliana (Mouse-ear cress)
Length = 537
Score = 69.3 bits (162), Expect = 8e-11
Identities = 34/77 (44%), Positives = 45/77 (58%)
Frame = +1
Query: 280 PIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGR 459
P LVL+PTRELA QI V + G +++ CV+GG+ K Q + GV+IVI TPGR
Sbjct: 192 PTCLVLSPTRELAVQISDVLREAGEPCGLKSICVYGGSSKGPQISAIRSGVDIVIGTPGR 251
Query: 460 LIDFLEKGTTNLQRCTF 510
L D +E L +F
Sbjct: 252 LRDLIESNVLRLSDVSF 268
Score = 47.2 bits (107), Expect = 4e-04
Identities = 23/43 (53%), Positives = 30/43 (69%)
Frame = +3
Query: 489 QLTAVHILVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSA 617
+L+ V +VLDEADRMLDMGFE +R I+ RQ +M+SA
Sbjct: 262 RLSDVSFVVLDEADRMLDMGFEEPVRFILSNTNKVRQMVMFSA 304
Score = 44.8 bits (101), Expect = 0.002
Identities = 22/60 (36%), Positives = 37/60 (61%), Gaps = 2/60 (3%)
Frame = +3
Query: 24 VTVSGVEV--HNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVLK 197
VT GVE + ++ F E+N P+ V KT +++P+PIQ+ WP + G++L+G+ K
Sbjct: 102 VTGKGVEEAKYAALKTFAESNLPENVLDCCKT--FEKPSPIQSHTWPFLLDGRDLIGIAK 159
>UniRef50_Q5NN72 Cluster: DNA and RNA helicase; n=3;
Sphingomonadales|Rep: DNA and RNA helicase - Zymomonas
mobilis
Length = 492
Score = 68.9 bits (161), Expect = 1e-10
Identities = 32/75 (42%), Positives = 46/75 (61%)
Frame = +1
Query: 280 PIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGR 459
P +L+L PTRELA Q+ + +G + + + GG P EQ LE+GV+++IATPGR
Sbjct: 73 PRSLILEPTRELAAQVAENFEKYGKYHKLSMSLLIGGVPMAEQQAALEKGVDVLIATPGR 132
Query: 460 LIDFLEKGTTNLQRC 504
L+D E+G L C
Sbjct: 133 LLDLFERGKILLSSC 147
Score = 50.4 bits (115), Expect = 4e-05
Identities = 24/47 (51%), Positives = 33/47 (70%)
Frame = +3
Query: 477 KGHNQLTAVHILVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSA 617
+G L++ +LV+DEADRMLDMGF P I I ++ RQTL++SA
Sbjct: 139 RGKILLSSCEMLVIDEADRMLDMGFIPDIETICTKLPTSRQTLLFSA 185
Score = 33.5 bits (73), Expect = 4.9
Identities = 14/42 (33%), Positives = 23/42 (54%)
Frame = +3
Query: 66 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGV 191
F + + Q V +GY+EPTP+QA P + ++L+ V
Sbjct: 3 FADLGLSKELLQAVAELGYEEPTPVQAAAIPSVLMMRDLIAV 44
>UniRef50_Q2BP56 Cluster: Putative ATP-dependent RNA helicase; n=1;
Neptuniibacter caesariensis|Rep: Putative ATP-dependent
RNA helicase - Neptuniibacter caesariensis
Length = 427
Score = 68.9 bits (161), Expect = 1e-10
Identities = 32/75 (42%), Positives = 48/75 (64%)
Frame = +1
Query: 286 ALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLI 465
ALVLAPTRELA Q+ ++G +R V+GG P Q + L+RG +I++ATPGRL+
Sbjct: 79 ALVLAPTRELAIQVADNTLEYGRDLGMRVISVYGGVPVENQIKRLKRGTDILVATPGRLL 138
Query: 466 DFLEKGTTNLQRCTF 510
D L + +L++ +
Sbjct: 139 DLLRQKAISLEKLEY 153
Score = 48.4 bits (110), Expect = 2e-04
Identities = 23/42 (54%), Positives = 31/42 (73%)
Frame = +3
Query: 492 LTAVHILVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSA 617
L + LVLDEADRMLD+GF I+KI++ DRQTL+++A
Sbjct: 148 LEKLEYLVLDEADRMLDLGFIDPIQKIMDYAADDRQTLLFTA 189
Score = 35.5 bits (78), Expect = 1.2
Identities = 15/40 (37%), Positives = 25/40 (62%)
Frame = +3
Query: 66 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLV 185
F E +Q +K +GY++PTPIQ+Q P+ + G +L+
Sbjct: 6 FAELALCPELQFTLKNLGYEQPTPIQSQAIPLVLRGDDLL 45
>UniRef50_A5UZK3 Cluster: DEAD/DEAH box helicase domain protein;
n=12; Bacteria|Rep: DEAD/DEAH box helicase domain
protein - Roseiflexus sp. RS-1
Length = 467
Score = 68.9 bits (161), Expect = 1e-10
Identities = 32/71 (45%), Positives = 47/71 (66%)
Frame = +1
Query: 286 ALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLI 465
A+++ PTRELA+QIQ V G + +R+ ++GG + Q + L RGVEI + PGRL+
Sbjct: 73 AMIVTPTRELAEQIQGVIEALGKYTGLRSVTLYGGVGYQGQIQRLRRGVEIAVVCPGRLL 132
Query: 466 DFLEKGTTNLQ 498
D LE+GT L+
Sbjct: 133 DHLERGTLTLE 143
Score = 48.0 bits (109), Expect = 2e-04
Identities = 22/49 (44%), Positives = 33/49 (67%)
Frame = +3
Query: 471 LGKGHNQLTAVHILVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSA 617
L +G L + +L+LDEAD+M DMGF P +R+I+ RQT+++SA
Sbjct: 135 LERGTLTLEHLDMLILDEADQMFDMGFLPDVRRILRLAPAQRQTMLFSA 183
Score = 40.3 bits (90), Expect = 0.043
Identities = 15/42 (35%), Positives = 26/42 (61%)
Frame = +3
Query: 66 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGV 191
F+ F + G++ +GY PTPIQ Q P A+ G++++G+
Sbjct: 3 FDSFRFHPQITAGIRDLGYHTPTPIQEQVIPHALDGRDVIGI 44
>UniRef50_Q9FZ92 Cluster: Putative DEAD-box ATP-dependent RNA
helicase 44; n=1; Arabidopsis thaliana|Rep: Putative
DEAD-box ATP-dependent RNA helicase 44 - Arabidopsis
thaliana (Mouse-ear cress)
Length = 622
Score = 68.9 bits (161), Expect = 1e-10
Identities = 37/88 (42%), Positives = 51/88 (57%), Gaps = 3/88 (3%)
Frame = +1
Query: 256 PPIR---RGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLER 426
PP+R + +GP ALV+ PTRELA QI++ F + + G +QA L +
Sbjct: 276 PPMREENQTEGPYALVMVPTRELAHQIEEETVKFSRYLGFKAVSITGWESIEKQALKLSQ 335
Query: 427 GVEIVIATPGRLIDFLEKGTTNLQRCTF 510
G EIVIATPGRL+D LE+ L +C +
Sbjct: 336 GCEIVIATPGRLLDCLERRYVVLNQCNY 363
Score = 40.3 bits (90), Expect = 0.043
Identities = 16/29 (55%), Positives = 23/29 (79%)
Frame = +3
Query: 492 LTAVHILVLDEADRMLDMGFEPQIRKIIE 578
L + LVLDEADRM+DM FEPQ+ ++++
Sbjct: 358 LNQCNYLVLDEADRMIDMDFEPQVSEVLD 386
>UniRef50_Q81JK1 Cluster: ATP-dependent RNA helicase, DEAD/DEAH box
family; n=30; Firmicutes|Rep: ATP-dependent RNA
helicase, DEAD/DEAH box family - Bacillus anthracis
Length = 481
Score = 68.5 bits (160), Expect = 1e-10
Identities = 30/77 (38%), Positives = 49/77 (63%)
Frame = +1
Query: 280 PIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGR 459
P ALVL PTRELA Q+++ + G ++ ++G +P Q +L++ IV+ TPGR
Sbjct: 73 PQALVLTPTRELAVQVKEDITNIGRFKRIKAAAIYGKSPFARQKLELKQKTHIVVGTPGR 132
Query: 460 LIDFLEKGTTNLQRCTF 510
++D +EKGT +L+R +
Sbjct: 133 VLDHIEKGTLSLERLKY 149
Score = 46.4 bits (105), Expect = 7e-04
Identities = 23/55 (41%), Positives = 34/55 (61%)
Frame = +3
Query: 477 KGHNQLTAVHILVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSAYLAQKKXR 641
KG L + LV+DEAD ML+MGF Q+ II+++ R T+++SA L + R
Sbjct: 139 KGTLSLERLKYLVIDEADEMLNMGFIDQVEAIIDELPTKRMTMLFSATLPEDVER 193
>UniRef50_Q62IF8 Cluster: ATP-dependent RNA helicase RhlE; n=59;
Betaproteobacteria|Rep: ATP-dependent RNA helicase RhlE
- Burkholderia mallei (Pseudomonas mallei)
Length = 482
Score = 68.5 bits (160), Expect = 1e-10
Identities = 33/70 (47%), Positives = 45/70 (64%)
Frame = +1
Query: 286 ALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLI 465
AL+L PTRELA Q+ + + +R+ VFGG Q +L RGVEI+IATPGRL+
Sbjct: 90 ALILTPTRELADQVAANVHAYAKHTPLRSAVVFGGVDMNPQMAELRRGVEILIATPGRLL 149
Query: 466 DFLEKGTTNL 495
D +++ T NL
Sbjct: 150 DHVQQKTANL 159
Score = 53.6 bits (123), Expect = 4e-06
Identities = 25/42 (59%), Positives = 33/42 (78%)
Frame = +3
Query: 492 LTAVHILVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSA 617
L V ILVLDEADRMLDMGF P +++I+ + +RQTL++SA
Sbjct: 159 LGQVQILVLDEADRMLDMGFLPDLQRILNLLPKERQTLLFSA 200
Score = 36.3 bits (80), Expect = 0.70
Identities = 13/41 (31%), Positives = 25/41 (60%)
Frame = +3
Query: 66 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVG 188
F++ + + + GY PTPIQA+ P+ +SG++++G
Sbjct: 13 FDQFGLAAEILKAIAEQGYTTPTPIQAKAIPVVLSGRDVMG 53
>UniRef50_Q1GJ43 Cluster: DEAD/DEAH box helicase-like protein; n=30;
cellular organisms|Rep: DEAD/DEAH box helicase-like
protein - Silicibacter sp. (strain TM1040)
Length = 710
Score = 68.5 bits (160), Expect = 1e-10
Identities = 36/77 (46%), Positives = 52/77 (67%), Gaps = 1/77 (1%)
Frame = +1
Query: 268 RGDGPIALVLAPTRELAQQIQ-QVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVI 444
R P+ALV+APTRELA Q++ +++ +G V +CV GG R++ R LERG IV+
Sbjct: 73 RAASPLALVIAPTRELALQVKRELSWLYGDAGAVLASCV-GGMDMRDERRALERGAHIVV 131
Query: 445 ATPGRLIDFLEKGTTNL 495
ATPGRL D + +G+ +L
Sbjct: 132 ATPGRLRDHITRGSIDL 148
Score = 49.6 bits (113), Expect = 7e-05
Identities = 23/51 (45%), Positives = 35/51 (68%)
Frame = +3
Query: 477 KGHNQLTAVHILVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSAYLAQ 629
+G L+ V +VLDEAD MLD+GF + I+E+ DRQTL++SA +++
Sbjct: 143 RGSIDLSGVAAVVLDEADEMLDLGFREDLEFILEETPEDRQTLLFSATVSK 193
>UniRef50_Q0BUS0 Cluster: ATP-dependent RNA helicase; n=3;
Rhodospirillales|Rep: ATP-dependent RNA helicase -
Granulobacter bethesdensis (strain ATCC BAA-1260 /
CGDNIH1)
Length = 731
Score = 68.5 bits (160), Expect = 1e-10
Identities = 35/74 (47%), Positives = 44/74 (59%)
Frame = +1
Query: 280 PIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGR 459
P+AL++APTRELA Q+QQ + R GG R +A+ LERG IV+ TPGR
Sbjct: 118 PLALIVAPTRELAMQVQQELLWLYGPAGARVVSCIGGMDARREAQALERGCHIVVGTPGR 177
Query: 460 LIDFLEKGTTNLQR 501
L D L +G NL R
Sbjct: 178 LCDHLGRGRLNLSR 191
Score = 52.0 bits (119), Expect = 1e-05
Identities = 22/54 (40%), Positives = 39/54 (72%)
Frame = +3
Query: 471 LGKGHNQLTAVHILVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSAYLAQK 632
LG+G L+ + +VLDEAD MLD+GF ++ +I++ +R+TL++SA +A++
Sbjct: 182 LGRGRLNLSRLRAVVLDEADEMLDLGFRDELEEILDATPAERRTLLFSATIARE 235
>UniRef50_A7CUH7 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Opitutaceae bacterium TAV2|Rep: DEAD/DEAH box
helicase domain protein - Opitutaceae bacterium TAV2
Length = 536
Score = 68.5 bits (160), Expect = 1e-10
Identities = 32/69 (46%), Positives = 46/69 (66%)
Frame = +1
Query: 289 LVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLID 468
LVL PTRELA Q+++ + + + T V+GG +Q DL+RGV++V ATPGRL+D
Sbjct: 205 LVLEPTRELALQVEEAFQKYSKYTDLTATVVYGGVGYGKQREDLQRGVDVVAATPGRLLD 264
Query: 469 FLEKGTTNL 495
+E+GT L
Sbjct: 265 HIEQGTMTL 273
Score = 55.2 bits (127), Expect = 1e-06
Identities = 27/49 (55%), Positives = 34/49 (69%)
Frame = +3
Query: 477 KGHNQLTAVHILVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSAYL 623
+G L V ILVLDE DRMLDMGF P +++I++Q RQTL +SA L
Sbjct: 268 QGTMTLADVEILVLDEVDRMLDMGFLPDVKRIVQQCPQARQTLFFSATL 316
Score = 41.1 bits (92), Expect = 0.024
Identities = 20/53 (37%), Positives = 29/53 (54%)
Frame = +3
Query: 30 VSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVG 188
V+ VE+ F + D + V MGY EPTPIQAQ P ++G+++ G
Sbjct: 123 VTPVEIPPQDTAFSKLGLNDALAFAVTEMGYTEPTPIQAQAVPAVLAGRDVTG 175
>UniRef50_A6W6A7 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Kineococcus radiotolerans SRS30216|Rep: DEAD/DEAH
box helicase domain protein - Kineococcus radiotolerans
SRS30216
Length = 590
Score = 68.5 bits (160), Expect = 1e-10
Identities = 35/93 (37%), Positives = 53/93 (56%)
Frame = +1
Query: 217 GLHLASHCAHKQPPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAP 396
GL + + A ++ P I P LVL PTRELA Q+ G + +R + V GG P
Sbjct: 201 GLPMLARLAQQKRPRIT--GAPRGLVLVPTRELAMQVADALRPLGDSLDLRLSVVVGGVP 258
Query: 397 KREQARDLERGVEIVIATPGRLIDFLEKGTTNL 495
Q L+RG++++IATPGRL+D +++ +L
Sbjct: 259 YGRQIAALQRGIDVLIATPGRLVDLIDRDAVSL 291
Score = 45.6 bits (103), Expect = 0.001
Identities = 21/44 (47%), Positives = 28/44 (63%)
Frame = +3
Query: 492 LTAVHILVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSAYL 623
L V + VLDEAD M D+GF P +R I+E +P Q + +SA L
Sbjct: 291 LAEVDVAVLDEADHMADLGFLPNVRAILEGTKPGGQRMFFSATL 334
>UniRef50_A6NSW7 Cluster: Putative uncharacterized protein; n=1;
Bacteroides capillosus ATCC 29799|Rep: Putative
uncharacterized protein - Bacteroides capillosus ATCC
29799
Length = 400
Score = 68.5 bits (160), Expect = 1e-10
Identities = 36/77 (46%), Positives = 49/77 (63%), Gaps = 1/77 (1%)
Frame = +1
Query: 274 DGPIALVLAPTRELAQQIQQVAADFGHTSY-VRNTCVFGGAPKREQARDLERGVEIVIAT 450
D ALVLAPTRELA QIQ D VR+ C++GGAP +Q L++ +IV+AT
Sbjct: 79 DAVQALVLAPTRELALQIQDELRDLCEFKEGVRSVCLYGGAPIEKQITTLKKHPQIVVAT 138
Query: 451 PGRLIDFLEKGTTNLQR 501
PGRL+D +++ T L +
Sbjct: 139 PGRLMDHMKRRTVKLDK 155
Score = 45.6 bits (103), Expect = 0.001
Identities = 23/58 (39%), Positives = 38/58 (65%)
Frame = +3
Query: 489 QLTAVHILVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSAYLAQKKXRNLLXITW 662
+L V +VLDEADRMLDMGF + +I++QI+ + ++SA ++ R ++ I+W
Sbjct: 152 KLDKVETVVLDEADRMLDMGFIHDVTRILDQIKSRKNLGLFSATIS----REVMDISW 205
>UniRef50_Q00T47 Cluster: Putative RNA helicase, DRH1; n=1;
Ostreococcus tauri|Rep: Putative RNA helicase, DRH1 -
Ostreococcus tauri
Length = 1118
Score = 68.5 bits (160), Expect = 1e-10
Identities = 34/66 (51%), Positives = 43/66 (65%)
Frame = +1
Query: 280 PIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGR 459
P +VLAPTRELA QI A F + R+ ++GGA K +Q R L G ++V+ATPGR
Sbjct: 173 PSVIVLAPTRELAIQIHDECAKFCPAAGCRSAVLYGGAAKGDQLRALRSGADVVVATPGR 232
Query: 460 LIDFLE 477
L DFLE
Sbjct: 233 LNDFLE 238
Score = 54.8 bits (126), Expect = 2e-06
Identities = 21/48 (43%), Positives = 32/48 (66%)
Frame = +3
Query: 54 PIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVLK 197
P F++A FP +++ +K GY PTPIQA+ WPI + GK++V + K
Sbjct: 84 PYVTFDDAKFPAALRKALKAQGYDAPTPIQAEAWPILLKGKDVVAIAK 131
Score = 52.0 bits (119), Expect = 1e-05
Identities = 24/36 (66%), Positives = 30/36 (83%)
Frame = +3
Query: 510 LVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSA 617
+VLDEADRMLDMGFEPQI+KI + RQT+M++A
Sbjct: 255 VVLDEADRMLDMGFEPQIKKIFKLCPSARQTVMFTA 290
>UniRef50_Q16T16 Cluster: DEAD box ATP-dependent RNA helicase; n=7;
Bilateria|Rep: DEAD box ATP-dependent RNA helicase -
Aedes aegypti (Yellowfever mosquito)
Length = 741
Score = 68.5 bits (160), Expect = 1e-10
Identities = 31/42 (73%), Positives = 37/42 (88%)
Frame = +3
Query: 492 LTAVHILVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSA 617
+T++ LVLDEADRMLDMGFEPQIRK++ IRPDRQT+M SA
Sbjct: 469 ITSITYLVLDEADRMLDMGFEPQIRKLLLDIRPDRQTIMTSA 510
Score = 67.7 bits (158), Expect = 2e-10
Identities = 35/92 (38%), Positives = 54/92 (58%), Gaps = 3/92 (3%)
Frame = +1
Query: 244 HKQPPPIRRGD---GPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQAR 414
H + P+ RG+ GP LV+APTRELA QI++ + ++ C++GG +R Q
Sbjct: 384 HIEGQPVPRGEARGGPNVLVMAPTRELALQIEKEVFKYQFRD-IKAICLYGGGDRRTQIN 442
Query: 415 DLERGVEIVIATPGRLIDFLEKGTTNLQRCTF 510
++ GVEI+IATPGRL D + ++ T+
Sbjct: 443 KVKGGVEIIIATPGRLNDLVAANVIDITSITY 474
Score = 54.0 bits (124), Expect = 3e-06
Identities = 20/51 (39%), Positives = 38/51 (74%), Gaps = 2/51 (3%)
Frame = +3
Query: 45 VHNPIQYFEEA--NFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGV 191
+ NP+Q FE+A +P+ +++ +K G+ +P+PIQAQ WP+ + G++L+G+
Sbjct: 317 IPNPVQTFEQAFHEYPELLEE-IKKQGFAKPSPIQAQAWPVLLKGEDLIGI 366
Score = 34.7 bits (76), Expect = 2.1
Identities = 13/18 (72%), Positives = 17/18 (94%)
Frame = +2
Query: 194 QTGSGKTLAYILPAIVHI 247
QTG+GKTLA++LPA +HI
Sbjct: 368 QTGTGKTLAFLLPAFIHI 385
>UniRef50_A7U5X1 Cluster: DEAD-box helicase 11; n=11;
Plasmodium|Rep: DEAD-box helicase 11 - Plasmodium
falciparum
Length = 941
Score = 68.5 bits (160), Expect = 1e-10
Identities = 35/77 (45%), Positives = 48/77 (62%)
Frame = +1
Query: 280 PIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGR 459
PI L+LAPTRELA QI A F + ++ ++GG + Q +L++G +I++ATPGR
Sbjct: 452 PICLILAPTRELAVQIFYDAKKFCFETGIKPVVLYGGNNIKTQLSNLDKGADIIVATPGR 511
Query: 460 LIDFLEKGTTNLQRCTF 510
L D LEKG L TF
Sbjct: 512 LNDILEKGKIKLFLTTF 528
Score = 48.8 bits (111), Expect = 1e-04
Identities = 24/39 (61%), Positives = 27/39 (69%)
Frame = +3
Query: 459 IN*FLGKGHNQLTAVHILVLDEADRMLDMGFEPQIRKII 575
+N L KG +L LVLDEADRMLDMGF PQIR I+
Sbjct: 512 LNDILEKGKIKLFLTTFLVLDEADRMLDMGFSPQIRSIV 550
>UniRef50_Q9LU46 Cluster: DEAD-box ATP-dependent RNA helicase 35;
n=2; Magnoliophyta|Rep: DEAD-box ATP-dependent RNA
helicase 35 - Arabidopsis thaliana (Mouse-ear cress)
Length = 591
Score = 68.5 bits (160), Expect = 1e-10
Identities = 37/90 (41%), Positives = 51/90 (56%), Gaps = 6/90 (6%)
Frame = +1
Query: 259 PIRRGDGPIALVLAPTRELAQQ----IQQVAADFGHTSY--VRNTCVFGGAPKREQARDL 420
PI G+GPI L++ P+RELA+Q ++Q A Y +R+ GG R Q +
Sbjct: 216 PIAAGEGPIGLIVCPSRELARQTYEVVEQFVAPLVEAGYPPLRSLLCIGGIDMRSQLEVV 275
Query: 421 ERGVEIVIATPGRLIDFLEKGTTNLQRCTF 510
+RGV IV+ATPGRL D L K +L C +
Sbjct: 276 KRGVHIVVATPGRLKDMLAKKKMSLDACRY 305
Score = 52.0 bits (119), Expect = 1e-05
Identities = 24/54 (44%), Positives = 34/54 (62%)
Frame = +3
Query: 471 LGKGHNQLTAVHILVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSAYLAQK 632
L K L A L LDEADR++D+GFE IR++ + + RQTL++SA + K
Sbjct: 293 LAKKKMSLDACRYLTLDEADRLVDLGFEDDIREVFDHFKSQRQTLLFSATMPTK 346
Score = 51.6 bits (118), Expect = 2e-05
Identities = 20/56 (35%), Positives = 37/56 (66%)
Frame = +3
Query: 24 VTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGV 191
+ V+G ++ PI+ F++ FP V +K G +PTPIQ QG P+ ++G++++G+
Sbjct: 134 IIVNGDDIPPPIKNFKDMKFPRPVLDTLKEKGIVQPTPIQVQGLPVILAGRDMIGI 189
>UniRef50_Q6APU7 Cluster: Related to ATP-dependent RNA helicase;
n=1; Desulfotalea psychrophila|Rep: Related to
ATP-dependent RNA helicase - Desulfotalea psychrophila
Length = 498
Score = 68.1 bits (159), Expect = 2e-10
Identities = 37/76 (48%), Positives = 45/76 (59%), Gaps = 1/76 (1%)
Frame = +1
Query: 280 PIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERG-VEIVIATPG 456
P AL+LAPTREL QI + A G + V V+GGA +Q L+RG +IV+ATPG
Sbjct: 169 PRALILAPTRELVMQIVKDAKKLGRYTGVNADAVYGGAEYEKQMELLKRGKTDIVVATPG 228
Query: 457 RLIDFLEKGTTNLQRC 504
RLIDF K N C
Sbjct: 229 RLIDFHNKRLVNFDNC 244
Score = 50.4 bits (115), Expect = 4e-05
Identities = 24/41 (58%), Positives = 33/41 (80%), Gaps = 2/41 (4%)
Frame = +3
Query: 510 LVLDEADRMLDMGFEPQIRKIIEQI--RPDRQTLMWSAYLA 626
LV+DEADRMLDMGF P +R+I+ + + DRQTLM+SA ++
Sbjct: 247 LVIDEADRMLDMGFIPDVRRIVSWMPKKRDRQTLMFSATIS 287
>UniRef50_A7BCL2 Cluster: Putative uncharacterized protein; n=1;
Actinomyces odontolyticus ATCC 17982|Rep: Putative
uncharacterized protein - Actinomyces odontolyticus ATCC
17982
Length = 722
Score = 68.1 bits (159), Expect = 2e-10
Identities = 35/71 (49%), Positives = 46/71 (64%), Gaps = 1/71 (1%)
Frame = +1
Query: 286 ALVLAPTRELAQQIQQVAADFG-HTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRL 462
ALVLAPTRELA Q Q DF T+ + V+GG+P Q L+RG ++V+ TPGR+
Sbjct: 116 ALVLAPTRELAMQSAQAIEDFAARTARLDVVPVYGGSPYGPQIGALKRGAQVVVGTPGRV 175
Query: 463 IDFLEKGTTNL 495
ID +EKG +L
Sbjct: 176 IDLIEKGALDL 186
Score = 41.9 bits (94), Expect = 0.014
Identities = 22/47 (46%), Positives = 27/47 (57%)
Frame = +3
Query: 477 KGHNQLTAVHILVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSA 617
KG L+ V +LVLDEAD ML MGF + I DR T ++SA
Sbjct: 181 KGALDLSHVRMLVLDEADEMLRMGFAEDVETIASSAPDDRLTALFSA 227
Score = 33.5 bits (73), Expect = 4.9
Identities = 14/42 (33%), Positives = 23/42 (54%)
Frame = +3
Query: 66 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGV 191
F P+ + V MG++ PTPIQA P + +++VG+
Sbjct: 47 FASLGLPEEILAAVTDMGFRVPTPIQAAAIPPLLELRDVVGI 88
>UniRef50_Q4QIG1 Cluster: ATP-dependent DEAD/H RNA helicase,
putative; n=7; Trypanosomatidae|Rep: ATP-dependent
DEAD/H RNA helicase, putative - Leishmania major
Length = 685
Score = 68.1 bits (159), Expect = 2e-10
Identities = 37/100 (37%), Positives = 55/100 (55%), Gaps = 3/100 (3%)
Frame = +1
Query: 220 LHLASHCAHKQPPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPK 399
L L HCA + P +G+GPI LVL PT+ELA Q+ + + G + +R +G
Sbjct: 103 LPLIRHCADQ--PRCEKGEGPIGLVLVPTQELAMQVFTLLDELGEAARLRCVASYGSTSL 160
Query: 400 REQARDLERGVEIVIATPGRLIDFLEKG---TTNLQRCTF 510
+ R + G E+++ATPGRL+D L T +L R +F
Sbjct: 161 SDNIRHAKVGCELMVATPGRLLDLLTVNGGKTLSLSRVSF 200
Score = 42.7 bits (96), Expect = 0.008
Identities = 19/47 (40%), Positives = 30/47 (63%)
Frame = +3
Query: 492 LTAVHILVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSAYLAQK 632
L+ V +++DEADR+ D GF + ++ IRPDR T M SA + ++
Sbjct: 195 LSRVSFVIVDEADRLFDSGFMEHVEAFLKNIRPDRVTGMISATMPKE 241
Score = 35.9 bits (79), Expect = 0.92
Identities = 18/52 (34%), Positives = 29/52 (55%)
Frame = +3
Query: 30 VSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLV 185
V G +V PI+ + PD V + ++ YK P +Q+ G P MSG++L+
Sbjct: 37 VRGQDVPRPIRSWHGTGLPDRVLEVLEEHEYKCPFAVQSLGVPALMSGRDLL 88
>UniRef50_Q9PA24 Cluster: ATP-dependent RNA helicase rhlB; n=87;
Proteobacteria|Rep: ATP-dependent RNA helicase rhlB -
Xylella fastidiosa
Length = 543
Score = 68.1 bits (159), Expect = 2e-10
Identities = 34/72 (47%), Positives = 46/72 (63%)
Frame = +1
Query: 265 RRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVI 444
R + P AL+LAPTRELA QI A FG +R ++GG +Q L +G ++VI
Sbjct: 80 RNPEDPRALILAPTRELAIQIYNDAVKFGGNLGLRFALIYGGVDYDKQREMLRKGADVVI 139
Query: 445 ATPGRLIDFLEK 480
ATPGRLID+L++
Sbjct: 140 ATPGRLIDYLKQ 151
Score = 44.0 bits (99), Expect = 0.003
Identities = 24/49 (48%), Positives = 32/49 (65%), Gaps = 2/49 (4%)
Frame = +3
Query: 492 LTAVHILVLDEADRMLDMGFEPQIRKIIEQI--RPDRQTLMWSAYLAQK 632
L I VLDEADRM D+GF IR I+ ++ R RQTL++SA L+ +
Sbjct: 157 LRVCEICVLDEADRMFDLGFIKDIRFILRRLPERCSRQTLLFSATLSHR 205
>UniRef50_UPI00003937F7 Cluster: COG0513: Superfamily II DNA and RNA
helicases; n=1; Bifidobacterium longum DJO10A|Rep:
COG0513: Superfamily II DNA and RNA helicases -
Bifidobacterium longum DJO10A
Length = 670
Score = 67.7 bits (158), Expect = 2e-10
Identities = 35/72 (48%), Positives = 41/72 (56%)
Frame = +1
Query: 280 PIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGR 459
P LVLAPTRELA QI V HT + T V+GG Q RDL+ G +IV+A PGR
Sbjct: 110 PRGLVLAPTRELANQINDVLMPLAHTFGMNTTTVYGGVKYIHQIRDLKAGADIVVACPGR 169
Query: 460 LIDFLEKGTTNL 495
L D L + L
Sbjct: 170 LEDLLRQQALTL 181
Score = 54.4 bits (125), Expect = 2e-06
Identities = 22/44 (50%), Positives = 35/44 (79%)
Frame = +3
Query: 492 LTAVHILVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSAYL 623
L++V ++V+DEAD M DMGF P +++++EQI PD Q +++SA L
Sbjct: 181 LSSVEVVVIDEADEMADMGFLPPVKRLLEQISPDAQHMLFSATL 224
Score = 38.7 bits (86), Expect = 0.13
Identities = 16/41 (39%), Positives = 26/41 (63%)
Frame = +2
Query: 152 LADSYVWKEFSWRTQTGSGKTLAYILPAIVHINNHRLFGEV 274
L DS ++ R +TGSGKTLA+ +P + + ++ FGE+
Sbjct: 41 LPDSLAGRDILGRGRTGSGKTLAFSIPLVTRLGSYDSFGEI 81
>UniRef50_UPI0000F3242A Cluster: Probable ATP-dependent RNA helicase
DDX43 (EC 3.6.1.-) (DEAD box protein 43) (DEAD box
protein HAGE) (Helical antigen).; n=1; Bos taurus|Rep:
Probable ATP-dependent RNA helicase DDX43 (EC 3.6.1.-)
(DEAD box protein 43) (DEAD box protein HAGE) (Helical
antigen). - Bos Taurus
Length = 597
Score = 67.7 bits (158), Expect = 2e-10
Identities = 33/87 (37%), Positives = 51/87 (58%)
Frame = +1
Query: 250 QPPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERG 429
QP R +GP LVL PTRELA Q+ +++ + +++ C++GG + Q +DL +G
Sbjct: 306 QPVLQRARNGPGMLVLTPTRELALQVDAECSEYSYRG-LKSVCIYGGGDRDGQIKDLSKG 364
Query: 430 VEIVIATPGRLIDFLEKGTTNLQRCTF 510
+I+IATPGRL D L+ T+
Sbjct: 365 ADIIIATPGRLHDLQMNNFVYLKSITY 391
Score = 61.7 bits (143), Expect = 2e-08
Identities = 28/41 (68%), Positives = 34/41 (82%)
Frame = +3
Query: 492 LTAVHILVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWS 614
L ++ LVLDEAD+MLDMGFEPQI KI+ +RPDRQT+M S
Sbjct: 386 LKSITYLVLDEADKMLDMGFEPQIMKILLDVRPDRQTVMTS 426
Score = 46.4 bits (105), Expect = 7e-04
Identities = 21/49 (42%), Positives = 34/49 (69%), Gaps = 2/49 (4%)
Frame = +3
Query: 51 NPIQYFEEAN--FPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGV 191
NP FE+A +P+ V + ++ G+++PTPIQ+Q WPI + G +L+GV
Sbjct: 237 NPTCNFEDAFHCYPE-VMRNIEKAGFQKPTPIQSQAWPIILQGIDLIGV 284
Score = 33.5 bits (73), Expect = 4.9
Identities = 11/20 (55%), Positives = 18/20 (90%)
Frame = +2
Query: 194 QTGSGKTLAYILPAIVHINN 253
QTG+GKTL+Y++P +HI++
Sbjct: 286 QTGTGKTLSYLMPGFIHIDS 305
>UniRef50_Q8YXJ0 Cluster: ATP-dependent RNA helicase; n=11;
Cyanobacteria|Rep: ATP-dependent RNA helicase - Anabaena
sp. (strain PCC 7120)
Length = 513
Score = 67.7 bits (158), Expect = 2e-10
Identities = 33/72 (45%), Positives = 43/72 (59%)
Frame = +1
Query: 286 ALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLI 465
A+VL PTRELA Q+ A F S +R ++GG Q L+RGV IV+ TPGR+I
Sbjct: 74 AIVLTPTRELAIQVHDAMAQFVGNSGLRTLAIYGGQSIDRQMLQLKRGVHIVVGTPGRVI 133
Query: 466 DFLEKGTTNLQR 501
D LE+G L +
Sbjct: 134 DLLERGNLKLDQ 145
Score = 47.6 bits (108), Expect = 3e-04
Identities = 24/49 (48%), Positives = 31/49 (63%)
Frame = +3
Query: 471 LGKGHNQLTAVHILVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSA 617
L +G+ +L V VLDEAD ML MGF + KI+ Q DRQT ++SA
Sbjct: 136 LERGNLKLDQVKWFVLDEADEMLSMGFIDDVEKILSQAPQDRQTALFSA 184
>UniRef50_Q8G5U3 Cluster: Possible ATP-dependent RNA helicase; n=3;
Bifidobacterium|Rep: Possible ATP-dependent RNA helicase
- Bifidobacterium longum
Length = 728
Score = 67.7 bits (158), Expect = 2e-10
Identities = 35/72 (48%), Positives = 41/72 (56%)
Frame = +1
Query: 280 PIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGR 459
P LVLAPTRELA QI V HT + T V+GG Q RDL+ G +IV+A PGR
Sbjct: 126 PRGLVLAPTRELANQINDVLMPLAHTFGMNTTTVYGGVKYIHQIRDLKAGADIVVACPGR 185
Query: 460 LIDFLEKGTTNL 495
L D L + L
Sbjct: 186 LEDLLRQQALTL 197
Score = 54.4 bits (125), Expect = 2e-06
Identities = 22/44 (50%), Positives = 35/44 (79%)
Frame = +3
Query: 492 LTAVHILVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSAYL 623
L++V ++V+DEAD M DMGF P +++++EQI PD Q +++SA L
Sbjct: 197 LSSVEVVVIDEADEMADMGFLPPVKRLLEQISPDAQHMLFSATL 240
Score = 38.7 bits (86), Expect = 0.13
Identities = 16/41 (39%), Positives = 26/41 (63%)
Frame = +2
Query: 152 LADSYVWKEFSWRTQTGSGKTLAYILPAIVHINNHRLFGEV 274
L DS ++ R +TGSGKTLA+ +P + + ++ FGE+
Sbjct: 57 LPDSLAGRDILGRGRTGSGKTLAFSIPLVTRLGSYDSFGEI 97
>UniRef50_A6DIU5 Cluster: Probable ATP dependent RNA helicase; n=1;
Lentisphaera araneosa HTCC2155|Rep: Probable ATP
dependent RNA helicase - Lentisphaera araneosa HTCC2155
Length = 537
Score = 67.7 bits (158), Expect = 2e-10
Identities = 32/72 (44%), Positives = 45/72 (62%)
Frame = +1
Query: 280 PIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGR 459
P AL+L PTRELA Q+ + F + ++GGAP +Q R L++GV++V+ATPGR
Sbjct: 72 PQALILCPTRELAIQVNEEIKSFCKGRGITTVTLYGGAPIMDQKRALKKGVDLVVATPGR 131
Query: 460 LIDFLEKGTTNL 495
I F+E G L
Sbjct: 132 CIHFIEDGKLEL 143
Score = 46.8 bits (106), Expect = 5e-04
Identities = 22/50 (44%), Positives = 32/50 (64%)
Frame = +3
Query: 468 FLGKGHNQLTAVHILVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSA 617
F+ G +L ++ LVLDEAD ML+MGF + K+++ DR LM+SA
Sbjct: 135 FIEDGKLELDSLEYLVLDEADEMLNMGFVEDVEKVLKASPDDRTVLMFSA 184
>UniRef50_A6CFZ8 Cluster: ATP-dependent RNA helicase; n=1;
Planctomyces maris DSM 8797|Rep: ATP-dependent RNA
helicase - Planctomyces maris DSM 8797
Length = 445
Score = 67.7 bits (158), Expect = 2e-10
Identities = 32/74 (43%), Positives = 47/74 (63%)
Frame = +1
Query: 280 PIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGR 459
P+ALVLAPTRELA QI +G +R+ ++GG + Q + L+RG I++ATPGR
Sbjct: 76 PLALVLAPTRELAIQIGDSFDAYGRHLKLRSVLIYGGVGQGNQVKALKRGAHILVATPGR 135
Query: 460 LIDFLEKGTTNLQR 501
L+D + +G L +
Sbjct: 136 LLDLMNQGHIKLNQ 149
Score = 61.7 bits (143), Expect = 2e-08
Identities = 28/54 (51%), Positives = 39/54 (72%)
Frame = +3
Query: 471 LGKGHNQLTAVHILVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSAYLAQK 632
+ +GH +L + + VLDEADRMLDMGF P +++II Q+ RQ+L +SA LA K
Sbjct: 140 MNQGHIKLNQLEVFVLDEADRMLDMGFLPDLKRIITQLPTQRQSLFFSATLAPK 193
Score = 36.3 bits (80), Expect = 0.70
Identities = 17/41 (41%), Positives = 25/41 (60%)
Frame = +3
Query: 66 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVG 188
F+E VQ+ + YK PTPIQAQ P A+ G++++G
Sbjct: 4 FQELKLIAPVQKALVEENYKIPTPIQAQTIPAALEGRDVLG 44
>UniRef50_Q9N5K1 Cluster: Putative uncharacterized protein; n=2;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 630
Score = 67.7 bits (158), Expect = 2e-10
Identities = 39/105 (37%), Positives = 55/105 (52%), Gaps = 8/105 (7%)
Frame = +1
Query: 220 LHLASHCAHKQPP-PIRRGDGPIALVLAPTRELAQQIQQVAADF-------GHTSYVRNT 375
L L C ++ P R +GP L++ P+RELA+QI + + G
Sbjct: 246 LPLVMFCLEQEMKLPFMRSEGPFGLIIVPSRELARQIFDLIIEMFDALGKAGLPEMRAGL 305
Query: 376 CVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTF 510
C+ GG P EQA+D+ G+ IV+ATPGRL D L K NL+ C +
Sbjct: 306 CI-GGVPIGEQAKDVRDGIHIVVATPGRLSDMLTKKIINLEVCRY 349
Score = 51.6 bits (118), Expect = 2e-05
Identities = 25/47 (53%), Positives = 32/47 (68%)
Frame = +3
Query: 492 LTAVHILVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSAYLAQK 632
L LVLDEADRMLDMGFE +I+ I + RQTL++SA + +K
Sbjct: 344 LEVCRYLVLDEADRMLDMGFEDEIKSIFYFFKAQRQTLLFSATMPRK 390
Score = 41.1 bits (92), Expect = 0.024
Identities = 20/57 (35%), Positives = 33/57 (57%), Gaps = 1/57 (1%)
Frame = +3
Query: 24 VTVSGVEVHNPIQYFEEANFPDYVQQGV-KTMGYKEPTPIQAQGWPIAMSGKNLVGV 191
++ G + PI F E FP + + + K G PT IQ QG P+A+SG++++G+
Sbjct: 177 ISCEGDHIPPPIGSFLEMKFPKSLLEFMQKQKGIVTPTAIQIQGIPVALSGRDMIGI 233
>UniRef50_A7RGX3 Cluster: Predicted protein; n=3; Eukaryota|Rep:
Predicted protein - Nematostella vectensis
Length = 487
Score = 67.7 bits (158), Expect = 2e-10
Identities = 35/91 (38%), Positives = 54/91 (59%), Gaps = 7/91 (7%)
Frame = +1
Query: 259 PIRRGDGPIALVLAPTRELAQQIQQVAADF-------GHTSYVRNTCVFGGAPKREQARD 417
P +R +GP +++ P+RELA+Q +V F G S N C+ GG+ +EQ+
Sbjct: 117 PFQRNEGPYGMIVVPSRELARQTFEVITHFSRALEAHGFPSLRTNLCI-GGSSIKEQSDA 175
Query: 418 LERGVEIVIATPGRLIDFLEKGTTNLQRCTF 510
++RGV +V+ATPGRL+D L+K L C +
Sbjct: 176 MKRGVHMVVATPGRLMDLLDKRIITLDVCRY 206
Score = 52.0 bits (119), Expect = 1e-05
Identities = 24/47 (51%), Positives = 31/47 (65%)
Frame = +3
Query: 492 LTAVHILVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSAYLAQK 632
L LVLDEADRM+DMGFE +R I + RQTL++SA + +K
Sbjct: 201 LDVCRYLVLDEADRMIDMGFEEDVRTIFSYFKSQRQTLLFSATMPKK 247
Score = 50.4 bits (115), Expect = 4e-05
Identities = 19/56 (33%), Positives = 34/56 (60%)
Frame = +3
Query: 24 VTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGV 191
+ V G ++ P++ F+E FP + +K G PTPIQ QG P ++G++++G+
Sbjct: 35 ILVEGDDIPPPVKTFKEMKFPRPILAALKKKGITHPTPIQVQGLPAVLTGRDMIGI 90
>UniRef50_Q82T78 Cluster: RhlE; ATP-dependent RNA helicase RhlE;
n=3; Nitrosomonadaceae|Rep: RhlE; ATP-dependent RNA
helicase RhlE - Nitrosomonas europaea
Length = 498
Score = 67.3 bits (157), Expect = 3e-10
Identities = 32/72 (44%), Positives = 44/72 (61%)
Frame = +1
Query: 286 ALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLI 465
AL++APTRELA QI + +G +R VFGG Q L+ GVEI++ATPGRL+
Sbjct: 84 ALIMAPTRELAMQIDESVRKYGKYLALRTAVVFGGINIEPQIAALQAGVEILVATPGRLL 143
Query: 466 DFLEKGTTNLQR 501
D +E+ N +
Sbjct: 144 DLVEQKAVNFSK 155
Score = 54.0 bits (124), Expect = 3e-06
Identities = 24/37 (64%), Positives = 31/37 (83%)
Frame = +3
Query: 507 ILVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSA 617
ILVLDEADRMLDMGF P I++++ + P RQ+LM+SA
Sbjct: 158 ILVLDEADRMLDMGFLPDIKRVMALLSPQRQSLMFSA 194
>UniRef50_A6PQ62 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Victivallis vadensis ATCC BAA-548|Rep: DEAD/DEAH
box helicase domain protein - Victivallis vadensis ATCC
BAA-548
Length = 542
Score = 67.3 bits (157), Expect = 3e-10
Identities = 36/79 (45%), Positives = 49/79 (62%)
Frame = +1
Query: 265 RRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVI 444
R+ P ALVLAPTRELA QIQ+ A + + + VFGG +Q R LE+ V++VI
Sbjct: 195 RKPGCPRALVLAPTRELAMQIQKDAEVLEIFTGLTSVVVFGGMDHEKQRRSLEQPVDLVI 254
Query: 445 ATPGRLIDFLEKGTTNLQR 501
TPGR+ID+ G+ L +
Sbjct: 255 GTPGRIIDYSRGGSLKLSK 273
Score = 55.6 bits (128), Expect = 1e-06
Identities = 26/50 (52%), Positives = 39/50 (78%), Gaps = 2/50 (4%)
Frame = +3
Query: 480 GHNQLTAVHILVLDEADRMLDMGFEPQIRKIIEQI--RPDRQTLMWSAYL 623
G +L+ V +LV+DEADRMLDMGF P +++I+ Q+ + +RQTL++SA L
Sbjct: 267 GSLKLSKVEVLVIDEADRMLDMGFIPDVKRIVSQLPRKGERQTLLFSATL 316
>UniRef50_Q2H4C0 Cluster: Putative uncharacterized protein; n=1;
Chaetomium globosum|Rep: Putative uncharacterized
protein - Chaetomium globosum (Soil fungus)
Length = 602
Score = 67.3 bits (157), Expect = 3e-10
Identities = 31/70 (44%), Positives = 47/70 (67%)
Frame = +1
Query: 280 PIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGR 459
P+ +++ PTRELA QI A F + + +R V+GG R+QA+ L++G +I+IA+PGR
Sbjct: 206 PLVVIICPTRELAVQIFNEARKFCYRTMLRPCVVYGGGALRDQAQQLQKGCDILIASPGR 265
Query: 460 LIDFLEKGTT 489
LI F+ K T
Sbjct: 266 LIHFINKPET 275
>UniRef50_A4RK80 Cluster: Pre-mRNA-splicing ATP-dependent RNA
helicase PRP28; n=1; Magnaporthe grisea|Rep:
Pre-mRNA-splicing ATP-dependent RNA helicase PRP28 -
Magnaporthe grisea (Rice blast fungus) (Pyricularia
grisea)
Length = 674
Score = 67.3 bits (157), Expect = 3e-10
Identities = 35/84 (41%), Positives = 47/84 (55%), Gaps = 1/84 (1%)
Frame = +1
Query: 262 IRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPK-REQARDLERGVEI 438
+ + +GP AL+LAPTRELA QIQ F C+ G E A L G EI
Sbjct: 328 VTKTEGPYALILAPTRELATQIQAEVIKFATRMGFTVVCLIGNKRTIEEDAFALRNGAEI 387
Query: 439 VIATPGRLIDFLEKGTTNLQRCTF 510
++ATPGRL+D LE+ L +C++
Sbjct: 388 IVATPGRLVDCLERHLLVLSQCSY 411
Score = 60.1 bits (139), Expect = 5e-08
Identities = 23/61 (37%), Positives = 40/61 (65%)
Frame = +3
Query: 15 NHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVL 194
N E+ G + NP++++EE+N P ++ +K +GY EPTP+Q PIA+ ++L+G+
Sbjct: 242 NLEIVTKGNNIPNPMRFWEESNLPHVLKDTIKQVGYTEPTPVQRAAIPIALQCRDLIGIS 301
Query: 195 K 197
K
Sbjct: 302 K 302
Score = 36.7 bits (81), Expect = 0.53
Identities = 17/33 (51%), Positives = 22/33 (66%)
Frame = +3
Query: 492 LTAVHILVLDEADRMLDMGFEPQIRKIIEQIRP 590
L+ +VLDEADRM+D GFE I KI+ + P
Sbjct: 406 LSQCSYVVLDEADRMVDGGFEDSIHKILAALPP 438
>UniRef50_Q1J0S9 Cluster: DEAD/DEAH box helicase-like protein; n=2;
Deinococcus|Rep: DEAD/DEAH box helicase-like protein -
Deinococcus geothermalis (strain DSM 11300)
Length = 591
Score = 66.9 bits (156), Expect = 4e-10
Identities = 35/76 (46%), Positives = 48/76 (63%)
Frame = +1
Query: 268 RGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIA 447
RG P A+V+APTRELA+Q+ + + G + V+GGA Q L RGV++V+
Sbjct: 73 RGRLPRAIVIAPTRELAKQVAEEFSKSG--PQLSTVTVYGGAAYGPQENALRRGVDVVVG 130
Query: 448 TPGRLIDFLEKGTTNL 495
TPGRLID LE+G +L
Sbjct: 131 TPGRLIDHLERGNLDL 146
Score = 46.8 bits (106), Expect = 5e-04
Identities = 23/51 (45%), Positives = 33/51 (64%)
Frame = +3
Query: 471 LGKGHNQLTAVHILVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSAYL 623
L +G+ L+A+ VLDEAD ML +GF I I++Q RQT+++SA L
Sbjct: 139 LERGNLDLSAIQYAVLDEADEMLSVGFADAIETILQQTPAARQTMLFSATL 189
Score = 34.7 bits (76), Expect = 2.1
Identities = 16/51 (31%), Positives = 26/51 (50%)
Frame = +2
Query: 95 ATRCKDNGLQRTDAYSSSRLADSYVWKEFSWRTQTGSGKTLAYILPAIVHI 247
A R + G+ + L + K+ R +TG+GKTLA+ LP I ++
Sbjct: 12 AARLAERGITEASPIQAESLPHTLAGKDLIGRARTGTGKTLAFALPIIQNL 62
>UniRef50_A6GPV2 Cluster: Helicase; n=1; Limnobacter sp. MED105|Rep:
Helicase - Limnobacter sp. MED105
Length = 539
Score = 66.9 bits (156), Expect = 4e-10
Identities = 32/70 (45%), Positives = 46/70 (65%)
Frame = +1
Query: 286 ALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLI 465
AL+L PTRELA Q+ + + +R+T V+GG Q + L RGVE+VIATPGRL+
Sbjct: 99 ALILTPTRELADQVAANVHTYAKFTPLRSTVVYGGVDINPQIQTLRRGVELVIATPGRLL 158
Query: 466 DFLEKGTTNL 495
D +++ + NL
Sbjct: 159 DHVQQKSINL 168
Score = 50.8 bits (116), Expect = 3e-05
Identities = 24/42 (57%), Positives = 31/42 (73%)
Frame = +3
Query: 492 LTAVHILVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSA 617
L V +LVLDEADRMLDMGF P +++II + RQ L++SA
Sbjct: 168 LGQVQVLVLDEADRMLDMGFLPDLQRIINLLPKTRQNLLFSA 209
Score = 39.5 bits (88), Expect = 0.075
Identities = 16/44 (36%), Positives = 29/44 (65%)
Frame = +3
Query: 57 IQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVG 188
+ + + A PD +Q+ + GY +PTPIQA+ P+ M+G +++G
Sbjct: 20 VTFADFALHPD-IQKAIDAQGYTQPTPIQAKAIPVVMTGVDVMG 62
>UniRef50_Q6T442 Cluster: Hel61; n=4; Leishmania|Rep: Hel61 -
Leishmania major
Length = 544
Score = 66.9 bits (156), Expect = 4e-10
Identities = 37/80 (46%), Positives = 49/80 (61%), Gaps = 1/80 (1%)
Frame = +1
Query: 274 DG-PIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIAT 450
DG P LVLAPTREL QQ +V + G VR +GGAP+ QAR L G + ++A
Sbjct: 160 DGTPSVLVLAPTRELVQQTTKVFQNLG-CGQVRVCEAYGGAPRDLQARHLRNGCDALVAC 218
Query: 451 PGRLIDFLEKGTTNLQRCTF 510
PGRL DFL+ G +++ +F
Sbjct: 219 PGRLKDFLDGGDVSIRNLSF 238
Score = 42.3 bits (95), Expect = 0.011
Identities = 22/52 (42%), Positives = 31/52 (59%), Gaps = 2/52 (3%)
Frame = +3
Query: 468 FLGKGHNQLTAVHILVLDEADRMLDMGFEPQIRKIIEQI--RPDRQTLMWSA 617
FL G + + LV DEADR+LDMGF+ + +I+ + QT+MWSA
Sbjct: 225 FLDGGDVSIRNLSFLVFDEADRLLDMGFQVHLDEIMAYLDSASHPQTMMWSA 276
>UniRef50_A3FQ46 Cluster: U5 snRNP 100 kD protein, putative; n=2;
Cryptosporidium|Rep: U5 snRNP 100 kD protein, putative -
Cryptosporidium parvum Iowa II
Length = 529
Score = 66.9 bits (156), Expect = 4e-10
Identities = 36/83 (43%), Positives = 51/83 (61%), Gaps = 4/83 (4%)
Frame = +1
Query: 274 DGPIALVLAPTRELAQQIQQVAADFGHTSY----VRNTCVFGGAPKREQARDLERGVEIV 441
+GP L+LAP RELA QI+ A + ++ +R + GG +QA L +GVEI+
Sbjct: 217 EGPYGLILAPARELALQIEDEAQKLLNKTHELKRIRTLSIVGGRNIDQQAFSLRKGVEII 276
Query: 442 IATPGRLIDFLEKGTTNLQRCTF 510
IATPGR+ D LEK T L +C++
Sbjct: 277 IATPGRMQDCLEKTLTVLVQCSY 299
Score = 45.6 bits (103), Expect = 0.001
Identities = 17/59 (28%), Positives = 39/59 (66%)
Frame = +3
Query: 15 NHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGV 191
++ + V G +V NPI+ +++ + + + ++ +GY++PTPIQ Q PI + ++++G+
Sbjct: 127 DYSINVRGKDVPNPIRNWKDCHVLEIQTELIRNIGYEKPTPIQMQCIPIGLKLRDMIGI 185
Score = 44.0 bits (99), Expect = 0.003
Identities = 22/48 (45%), Positives = 35/48 (72%), Gaps = 2/48 (4%)
Frame = +3
Query: 510 LVLDEADRMLDMGFEPQIRKIIEQIRPD--RQTLMWSAYLAQKKXRNL 647
++LDEADRM+D+GF+ + I++QI P+ R T M+SA + QK+ N+
Sbjct: 300 VILDEADRMIDLGFQDSLNFILDQIPPEIQRTTHMFSATM-QKELENI 346
>UniRef50_A0BDT5 Cluster: Chromosome undetermined scaffold_101,
whole genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_101,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 1238
Score = 66.9 bits (156), Expect = 4e-10
Identities = 33/83 (39%), Positives = 50/83 (60%), Gaps = 1/83 (1%)
Frame = +1
Query: 265 RRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKRE-QARDLERGVEIV 441
++ +GP L+L PTRELA QI+ F ++ C++GG R+ Q +L R I+
Sbjct: 168 KKQNGPQMLILVPTRELAMQIESEIQLFTQNYRLKTLCIYGGINNRKNQFYNLGRFPNIL 227
Query: 442 IATPGRLIDFLEKGTTNLQRCTF 510
+ATPGRL+DFL +G T L ++
Sbjct: 228 VATPGRLLDFLREGATTLANVSY 250
Score = 59.3 bits (137), Expect = 9e-08
Identities = 28/50 (56%), Positives = 38/50 (76%)
Frame = +3
Query: 468 FLGKGHNQLTAVHILVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSA 617
FL +G L V LV+DEADR+L++GFE IR+I++QIR DRQT+ +SA
Sbjct: 237 FLREGATTLANVSYLVIDEADRLLELGFEDTIREIVQQIRFDRQTVFFSA 286
Score = 35.1 bits (77), Expect = 1.6
Identities = 15/55 (27%), Positives = 31/55 (56%)
Frame = +3
Query: 27 TVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGV 191
T +V P + A FP + + ++ + +K PT IQ+ +PI ++G +++G+
Sbjct: 83 TFENQKVPPPFLSWASAGFPIPILESIEQLQFKSPTIIQSVVFPIILAGYDVIGI 137
Score = 33.9 bits (74), Expect = 3.7
Identities = 12/22 (54%), Positives = 18/22 (81%)
Frame = +2
Query: 194 QTGSGKTLAYILPAIVHINNHR 259
QTGSGKT+AY+LP ++ I + +
Sbjct: 139 QTGSGKTIAYLLPGLIQITSQK 160
>UniRef50_Q3EBD3 Cluster: DEAD-box ATP-dependent RNA helicase 41;
n=6; Magnoliophyta|Rep: DEAD-box ATP-dependent RNA
helicase 41 - Arabidopsis thaliana (Mouse-ear cress)
Length = 505
Score = 66.9 bits (156), Expect = 4e-10
Identities = 36/92 (39%), Positives = 52/92 (56%), Gaps = 2/92 (2%)
Frame = +1
Query: 226 LASHCA--HKQPPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPK 399
+ S C H + P +R + P+A+VLAPTREL Q++ A G + V GG P
Sbjct: 168 IISRCTTYHSEHPSDQRRN-PLAMVLAPTRELCVQVEDQAKMLGKGLPFKTALVVGGDPM 226
Query: 400 REQARDLERGVEIVIATPGRLIDFLEKGTTNL 495
Q +++GVE++I TPGR++D L K T L
Sbjct: 227 SGQLYRIQQGVELIIGTPGRVVDLLSKHTIEL 258
Score = 40.7 bits (91), Expect = 0.032
Identities = 25/78 (32%), Positives = 37/78 (47%)
Frame = +3
Query: 36 GVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVLKRVPAKR 215
G V P+ F P + ++T GY PTPIQ Q P A++GK+L+ K
Sbjct: 102 GSAVPPPVLTFTSCGLPPKLLLNLETAGYDFPTPIQMQAIPAALTGKSLLASADTGSGKT 161
Query: 216 WPTSCQPLCT*TTTAYSE 269
+ P+ + TT +SE
Sbjct: 162 -ASFLVPIISRCTTYHSE 178
>UniRef50_P42305 Cluster: ATP-dependent RNA helicase dbpA; n=9;
Firmicutes|Rep: ATP-dependent RNA helicase dbpA -
Bacillus subtilis
Length = 479
Score = 66.9 bits (156), Expect = 4e-10
Identities = 31/77 (40%), Positives = 49/77 (63%)
Frame = +1
Query: 280 PIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGR 459
P AL+L PTRELA Q+++ + G ++ T VFG + +Q +L++ IV+ TPGR
Sbjct: 71 PQALILTPTRELAVQVKEDITNIGRFKRIKATAVFGKSSFDKQKAELKQKSHIVVGTPGR 130
Query: 460 LIDFLEKGTTNLQRCTF 510
++D +EKGT L R ++
Sbjct: 131 VLDHIEKGTLPLDRLSY 147
Score = 46.4 bits (105), Expect = 7e-04
Identities = 23/51 (45%), Positives = 33/51 (64%)
Frame = +3
Query: 477 KGHNQLTAVHILVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSAYLAQ 629
KG L + LV+DEAD ML+MGF Q+ II+ + +R T+++SA L Q
Sbjct: 137 KGTLPLDRLSYLVIDEADEMLNMGFIEQVEAIIKHLPTERTTMLFSATLPQ 187
>UniRef50_Q44NG9 Cluster: Helicase, C-terminal:DEAD/DEAH box
helicase, N-terminal; n=9; Bacteroidetes/Chlorobi
group|Rep: Helicase, C-terminal:DEAD/DEAH box helicase,
N-terminal - Chlorobium limicola DSM 245
Length = 499
Score = 66.5 bits (155), Expect = 6e-10
Identities = 29/75 (38%), Positives = 49/75 (65%)
Frame = +1
Query: 286 ALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLI 465
+L++ PTRELA QI + +G + + +T +FGG + Q L++G++I+IATPGRL+
Sbjct: 158 SLIITPTRELAIQIGESFKAYGRHTGLTSTVIFGGVNQNPQTASLQKGIDILIATPGRLL 217
Query: 466 DFLEKGTTNLQRCTF 510
D + +G +L+ F
Sbjct: 218 DLMNQGHLHLRNIEF 232
Score = 52.0 bits (119), Expect = 1e-05
Identities = 24/49 (48%), Positives = 33/49 (67%)
Frame = +3
Query: 471 LGKGHNQLTAVHILVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSA 617
+ +GH L + VLDEADRMLDMGF IRKI+ ++ +Q+L +SA
Sbjct: 220 MNQGHLHLRNIEFFVLDEADRMLDMGFIHDIRKILAELPKKKQSLFFSA 268
Score = 37.9 bits (84), Expect = 0.23
Identities = 18/61 (29%), Positives = 30/61 (49%), Gaps = 1/61 (1%)
Frame = +3
Query: 9 GNNHEVTVSGVEV-HNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLV 185
G+ H +T H F + + Q ++ GY+ PTPIQA+ P+ + G +L+
Sbjct: 64 GSIHPLTYRNQTTDHTDTMQFRSLAIIEPILQAIEEEGYQTPTPIQAEAIPLILDGNDLL 123
Query: 186 G 188
G
Sbjct: 124 G 124
>UniRef50_A7HKQ8 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Fervidobacterium nodosum Rt17-B1|Rep: DEAD/DEAH box
helicase domain protein - Fervidobacterium nodosum
Rt17-B1
Length = 571
Score = 66.5 bits (155), Expect = 6e-10
Identities = 31/75 (41%), Positives = 47/75 (62%)
Frame = +1
Query: 286 ALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLI 465
A+++ PTRELA QI + T V+ T ++GG +Q +DLE+GV+IV+ TPGR+I
Sbjct: 91 AIIVTPTRELALQIFEELKSLKGTKRVKITTLYGGQSLEKQFKDLEKGVDIVVGTPGRII 150
Query: 466 DFLEKGTTNLQRCTF 510
D L + T +L +
Sbjct: 151 DHLNRDTLDLSHVEY 165
Score = 44.8 bits (101), Expect = 0.002
Identities = 21/47 (44%), Positives = 34/47 (72%)
Frame = +3
Query: 492 LTAVHILVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSAYLAQK 632
L+ V LVLDEADRMLDMGF + +II++ +++T ++SA + ++
Sbjct: 160 LSHVEYLVLDEADRMLDMGFLDDVLEIIKRTGENKRTFLFSATMPKE 206
>UniRef50_A6NQG8 Cluster: Putative uncharacterized protein; n=2;
Bacteroidales|Rep: Putative uncharacterized protein -
Bacteroides capillosus ATCC 29799
Length = 636
Score = 66.5 bits (155), Expect = 6e-10
Identities = 31/72 (43%), Positives = 48/72 (66%)
Frame = +1
Query: 286 ALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLI 465
+L+L PTRELA QIQ+ +G +R+ +FGG ++ Q L++GV+I++ATPGRL+
Sbjct: 75 SLILTPTRELALQIQESFEAYGKHLPLRSAVIFGGVGQQPQVDKLKKGVDILVATPGRLL 134
Query: 466 DFLEKGTTNLQR 501
D +G +L R
Sbjct: 135 DLQGQGFVDLSR 146
Score = 50.0 bits (114), Expect = 5e-05
Identities = 23/48 (47%), Positives = 34/48 (70%)
Frame = +3
Query: 474 GKGHNQLTAVHILVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSA 617
G+G L+ + I VLDEADRMLDMGF +R++++ + +QTL +SA
Sbjct: 138 GQGFVDLSRLEIFVLDEADRMLDMGFLHDVRRVLKLLPAVKQTLFFSA 185
Score = 33.9 bits (74), Expect = 3.7
Identities = 12/41 (29%), Positives = 26/41 (63%)
Frame = +3
Query: 66 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVG 188
F E + + + +GY++P+PIQ + P A++G++++G
Sbjct: 3 FRELGLTQSILKALAELGYEKPSPIQEKAIPPALAGRDVLG 43
>UniRef50_A6GSW1 Cluster: Putative ATP-dependent RNA helicase; n=1;
Limnobacter sp. MED105|Rep: Putative ATP-dependent RNA
helicase - Limnobacter sp. MED105
Length = 617
Score = 66.5 bits (155), Expect = 6e-10
Identities = 39/84 (46%), Positives = 47/84 (55%), Gaps = 1/84 (1%)
Frame = +1
Query: 259 PIRRGDGPIALVLAPTRELAQQIQQVAADF-GHTSYVRNTCVFGGAPKREQARDLERGVE 435
P+ GP LVL PTRELAQQ+ Q A + T VR V GG P +Q L RG
Sbjct: 70 PMEMLAGPECLVLCPTRELAQQVSQDAINLVKFTKGVRVATVVGGMPYGKQMASL-RGAR 128
Query: 436 IVIATPGRLIDFLEKGTTNLQRCT 507
IV+ TPGRL+D ++G NL T
Sbjct: 129 IVVGTPGRLLDLAQQGKLNLSTVT 152
Score = 43.6 bits (98), Expect = 0.005
Identities = 24/53 (45%), Positives = 37/53 (69%), Gaps = 1/53 (1%)
Frame = +3
Query: 477 KGHNQLTAVHILVLDEADRMLDMGFEPQIRKIIEQIRPDR-QTLMWSAYLAQK 632
+G L+ V L++DEADRMLD+GF + + I+Q+ +R QTLM+SA A++
Sbjct: 143 QGKLNLSTVTTLIVDEADRMLDLGFSEDL-EAIDQLCGNRIQTLMFSATFAKR 194
>UniRef50_A1IIT4 Cluster: RNA helicase; n=1; Neobenedenia
girellae|Rep: RNA helicase - Neobenedenia girellae
Length = 548
Score = 66.5 bits (155), Expect = 6e-10
Identities = 33/75 (44%), Positives = 43/75 (57%)
Frame = +1
Query: 280 PIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGR 459
P ALVL PTREL QQI + + R V+GG + Q +L +G +IATPGR
Sbjct: 191 PSALVLVPTRELVQQILLEFNKMLYRCFPRAVGVYGGQNRSRQIHELSKGCHFMIATPGR 250
Query: 460 LIDFLEKGTTNLQRC 504
LIDFL++G + C
Sbjct: 251 LIDFLDEGMLRMDHC 265
Score = 48.8 bits (111), Expect = 1e-04
Identities = 23/36 (63%), Positives = 28/36 (77%)
Frame = +3
Query: 468 FLGKGHNQLTAVHILVLDEADRMLDMGFEPQIRKII 575
FL +G ++ H +VLDEADRMLDMGFE QIRKI+
Sbjct: 254 FLDEGMLRMDHCHSVVLDEADRMLDMGFEHQIRKIL 289
Score = 33.1 bits (72), Expect = 6.5
Identities = 14/21 (66%), Positives = 17/21 (80%)
Frame = +2
Query: 191 TQTGSGKTLAYILPAIVHINN 253
+QTGSGKTLAY+LP + I N
Sbjct: 151 SQTGSGKTLAYVLPIVNRILN 171
>UniRef50_A0D315 Cluster: Chromosome undetermined scaffold_36, whole
genome shotgun sequence; n=2; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_36,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 1127
Score = 66.5 bits (155), Expect = 6e-10
Identities = 32/81 (39%), Positives = 51/81 (62%)
Frame = +1
Query: 268 RGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIA 447
R +GP L+LAPTREL QI Q + F + + +GG + +QA+ ++R +I++A
Sbjct: 174 RINGPEILILAPTRELVMQIAQQVSLFMKPNNLTVATAYGGQNRDQQAQQIKRNPDILVA 233
Query: 448 TPGRLIDFLEKGTTNLQRCTF 510
PGRL DFL++G +L + T+
Sbjct: 234 CPGRLKDFLQEGILDLSKVTY 254
Score = 58.0 bits (134), Expect = 2e-07
Identities = 31/60 (51%), Positives = 41/60 (68%)
Frame = +3
Query: 468 FLGKGHNQLTAVHILVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSAYLAQKKXRNL 647
FL +G L+ V LV+DEADR+LDMGFE +R I+++ R DRQT+ +SA K RNL
Sbjct: 241 FLQEGILDLSKVTYLVIDEADRLLDMGFEDDVRFIVQRTRQDRQTVFFSA-TWPKAVRNL 299
Score = 37.9 bits (84), Expect = 0.23
Identities = 16/54 (29%), Positives = 29/54 (53%)
Frame = +3
Query: 30 VSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGV 191
+ G P + FP +Q + + ++ PTPIQ+ +P+ +SG +L+GV
Sbjct: 90 IDGQPCPYPFLTWGGTQFPPQIQNVIDGLNFRAPTPIQSVVFPLILSGYDLIGV 143
>UniRef50_O26305 Cluster: ATP-dependent RNA helicase, eIF-4A family;
n=1; Methanothermobacter thermautotrophicus str. Delta
H|Rep: ATP-dependent RNA helicase, eIF-4A family -
Methanobacterium thermoautotrophicum
Length = 425
Score = 66.5 bits (155), Expect = 6e-10
Identities = 31/72 (43%), Positives = 43/72 (59%)
Frame = +1
Query: 280 PIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGR 459
P AL++ PTREL Q+ + G V+ V+GG Q L RGV +++ATPGR
Sbjct: 72 PQALIICPTRELCLQVSEEIKRIGKYMKVKVLAVYGGQSIGNQIAQLRRGVHVIVATPGR 131
Query: 460 LIDFLEKGTTNL 495
LID +E+GT +L
Sbjct: 132 LIDHIERGTVDL 143
Score = 43.6 bits (98), Expect = 0.005
Identities = 20/51 (39%), Positives = 33/51 (64%)
Frame = +3
Query: 477 KGHNQLTAVHILVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSAYLAQ 629
+G L + +VLDEAD ML+MGF I +I+ + RQT+++SA +++
Sbjct: 138 RGTVDLGGISTVVLDEADEMLNMGFIDDIERILSHVPERRQTMLFSATVSK 188
>UniRef50_Q8YH70 Cluster: ATP-DEPENDENT RNA HELICASE RHLE; n=10;
Rhizobiales|Rep: ATP-DEPENDENT RNA HELICASE RHLE -
Brucella melitensis
Length = 535
Score = 66.1 bits (154), Expect = 8e-10
Identities = 31/79 (39%), Positives = 47/79 (59%)
Frame = +1
Query: 265 RRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVI 444
RR AL+LAPTRELA QI+Q + ++++ V GG K Q + + G++++I
Sbjct: 156 RRPKTARALILAPTRELAVQIEQTIRNVSKSAHISTALVLGGVSKLSQIKRIAPGIDVLI 215
Query: 445 ATPGRLIDFLEKGTTNLQR 501
ATPGRL D + G +L +
Sbjct: 216 ATPGRLTDLMRDGLVDLSQ 234
Score = 45.2 bits (102), Expect = 0.002
Identities = 21/47 (44%), Positives = 32/47 (68%)
Frame = +3
Query: 492 LTAVHILVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSAYLAQK 632
L+ LVLDEADRMLDMGF +++I + +RQT ++SA + ++
Sbjct: 232 LSQTRWLVLDEADRMLDMGFINDVKRIAKATHAERQTALFSATMPKE 278
>UniRef50_Q62J95 Cluster: ATP-dependent RNA helicase RhlE, putative;
n=58; Proteobacteria|Rep: ATP-dependent RNA helicase
RhlE, putative - Burkholderia mallei (Pseudomonas
mallei)
Length = 516
Score = 66.1 bits (154), Expect = 8e-10
Identities = 35/84 (41%), Positives = 50/84 (59%), Gaps = 1/84 (1%)
Frame = +1
Query: 247 KQPPPIRRGDGPIALVLAPTRELAQQIQQVAADFG-HTSYVRNTCVFGGAPKREQARDLE 423
++P P+ R P LVL PTRELA Q+ A+ +G H +R + GG +Q L
Sbjct: 130 RRPQPVAR---PGLLVLTPTRELAMQVTTAASTYGKHLRRLRTVSILGGVAYGQQLMLLA 186
Query: 424 RGVEIVIATPGRLIDFLEKGTTNL 495
+ EI++ATPGRL+D LE+G +L
Sbjct: 187 KNPEILVATPGRLLDHLERGRIDL 210
Score = 48.4 bits (110), Expect = 2e-04
Identities = 26/54 (48%), Positives = 34/54 (62%)
Frame = +3
Query: 471 LGKGHNQLTAVHILVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSAYLAQK 632
L +G L+ + +LVLDEADRMLDMGF I I+ RQT+++SA L K
Sbjct: 203 LERGRIDLSELKMLVLDEADRMLDMGFIDDIDTIVAATPATRQTMLFSATLDGK 256
>UniRef50_Q0HYG8 Cluster: DEAD/DEAH box helicase domain protein;
n=62; Proteobacteria|Rep: DEAD/DEAH box helicase domain
protein - Shewanella sp. (strain MR-7)
Length = 549
Score = 66.1 bits (154), Expect = 8e-10
Identities = 29/72 (40%), Positives = 44/72 (61%)
Frame = +1
Query: 286 ALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLI 465
ALVL PTRELA Q+ + +G +R+ VFGG P Q + L GV++++ATPGRL+
Sbjct: 76 ALVLTPTRELAAQVSESVETYGKYLPLRSAVVFGGVPINPQIQKLRHGVDVLVATPGRLL 135
Query: 466 DFLEKGTTNLQR 501
D +++ +
Sbjct: 136 DLVQQNVVKFNQ 147
Score = 48.4 bits (110), Expect = 2e-04
Identities = 24/39 (61%), Positives = 29/39 (74%)
Frame = +3
Query: 501 VHILVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSA 617
+ ILVLDEADRMLDMGF I+KI+ + RQ LM+SA
Sbjct: 148 LEILVLDEADRMLDMGFIRDIKKILALLPAKRQNLMFSA 186
Score = 34.3 bits (75), Expect = 2.8
Identities = 13/31 (41%), Positives = 21/31 (67%)
Frame = +3
Query: 93 VQQGVKTMGYKEPTPIQAQGWPIAMSGKNLV 185
+Q+ V GY P+PIQAQ P ++GK+++
Sbjct: 12 IQKAVTEQGYDTPSPIQAQAIPAVLTGKDVM 42
>UniRef50_A5G1U8 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Acidiphilium cryptum JF-5|Rep: DEAD/DEAH box
helicase domain protein - Acidiphilium cryptum (strain
JF-5)
Length = 525
Score = 66.1 bits (154), Expect = 8e-10
Identities = 34/70 (48%), Positives = 43/70 (61%)
Frame = +1
Query: 286 ALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLI 465
ALVLAPTRELA QI A +G + V GGA QAR +E GV++++ATPGRL+
Sbjct: 133 ALVLAPTRELATQIADAARTYGKFTRPSVAVVIGGAKPGPQARRMESGVDLLVATPGRLL 192
Query: 466 DFLEKGTTNL 495
D + G L
Sbjct: 193 DHVAAGVIRL 202
Score = 49.2 bits (112), Expect = 9e-05
Identities = 23/43 (53%), Positives = 33/43 (76%)
Frame = +3
Query: 489 QLTAVHILVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSA 617
+L AV +VLDEAD+MLD+GF P IR+I+ ++ RQ +M+SA
Sbjct: 201 RLDAVETVVLDEADQMLDLGFIPAIRQIMAKLPRQRQAVMFSA 243
Score = 33.9 bits (74), Expect = 3.7
Identities = 12/31 (38%), Positives = 20/31 (64%)
Frame = +3
Query: 99 QGVKTMGYKEPTPIQAQGWPIAMSGKNLVGV 191
+ + Y+ PTPIQA+ P+ + G +LVG+
Sbjct: 70 RAISEQSYETPTPIQARSIPVMLEGHDLVGI 100
>UniRef50_Q0UN57 Cluster: Pre-mRNA-processing ATP-dependent RNA
helicase PRP5; n=1; Phaeosphaeria nodorum|Rep:
Pre-mRNA-processing ATP-dependent RNA helicase PRP5 -
Phaeosphaeria nodorum (Septoria nodorum)
Length = 1149
Score = 66.1 bits (154), Expect = 8e-10
Identities = 33/77 (42%), Positives = 47/77 (61%), Gaps = 1/77 (1%)
Frame = +1
Query: 259 PIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLER-GVE 435
P++ DGPI L+LAPTREL+ QI F + S + C +GG P +Q ++R G+
Sbjct: 576 PLKPADGPIGLILAPTRELSLQIVNELKPFLNASGITIKCAYGGQPISDQIAMIKRGGIH 635
Query: 436 IVIATPGRLIDFLEKGT 486
I+ AT GRLID L+ +
Sbjct: 636 ILCATAGRLIDLLQSNS 652
Score = 61.3 bits (142), Expect = 2e-08
Identities = 26/36 (72%), Positives = 32/36 (88%)
Frame = +3
Query: 510 LVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSA 617
+VLDEADRM DMGFEPQ+ KI+ IRPDRQT+++SA
Sbjct: 664 VVLDEADRMFDMGFEPQVMKILASIRPDRQTILFSA 699
Score = 39.9 bits (89), Expect = 0.056
Identities = 20/58 (34%), Positives = 29/58 (50%)
Frame = +3
Query: 24 VTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVLK 197
+ V +V P+ + + +GY PT IQAQ PIA SG++L+GV K
Sbjct: 497 IKVKPDDVPRPVTKWAQMGLLQQTMDVFTRVGYARPTAIQAQAIPIAESGRDLIGVAK 554
>UniRef50_P0A9P8 Cluster: Cold-shock DEAD box protein A; n=54;
Gammaproteobacteria|Rep: Cold-shock DEAD box protein A -
Shigella flexneri
Length = 629
Score = 66.1 bits (154), Expect = 8e-10
Identities = 34/75 (45%), Positives = 46/75 (61%), Gaps = 1/75 (1%)
Frame = +1
Query: 280 PIALVLAPTRELAQQIQQVAADFG-HTSYVRNTCVFGGAPKREQARDLERGVEIVIATPG 456
P LVLAPTRELA Q+ + DF H V ++GG Q R L +G +IV+ TPG
Sbjct: 75 PQILVLAPTRELAVQVAEAMTDFSKHMRGVNVVALYGGQRYDVQLRALRQGPQIVVGTPG 134
Query: 457 RLIDFLEKGTTNLQR 501
RL+D L++GT +L +
Sbjct: 135 RLLDHLKRGTLDLSK 149
Score = 40.3 bits (90), Expect = 0.043
Identities = 22/53 (41%), Positives = 31/53 (58%)
Frame = +3
Query: 471 LGKGHNQLTAVHILVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSAYLAQ 629
L +G L+ + LVLDEAD ML MGF + I+ QI QT ++SA + +
Sbjct: 140 LKRGTLDLSKLSGLVLDEADEMLRMGFIEDVETIMAQIPEGHQTALFSATMPE 192
>UniRef50_Q11039 Cluster: Cold-shock DEAD box protein A homolog;
n=31; Bacteria|Rep: Cold-shock DEAD box protein A
homolog - Mycobacterium tuberculosis
Length = 563
Score = 66.1 bits (154), Expect = 8e-10
Identities = 33/78 (42%), Positives = 47/78 (60%), Gaps = 1/78 (1%)
Frame = +1
Query: 280 PIALVLAPTRELAQQIQQVAADFG-HTSYVRNTCVFGGAPKREQARDLERGVEIVIATPG 456
P ALVL PTRELA Q+ + +G + S + ++GG+ Q L RG ++V+ TPG
Sbjct: 82 PQALVLVPTRELALQVAEAFGRYGAYLSQLNVLPIYGGSSYAVQLAGLRRGAQVVVGTPG 141
Query: 457 RLIDFLEKGTTNLQRCTF 510
R+ID LE+ T +L R F
Sbjct: 142 RMIDHLERATLDLSRVDF 159
Score = 38.7 bits (86), Expect = 0.13
Identities = 18/42 (42%), Positives = 26/42 (61%)
Frame = +3
Query: 492 LTAVHILVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSA 617
L+ V LVLDEAD ML MGF + +I+ + +Q ++SA
Sbjct: 154 LSRVDFLVLDEADEMLTMGFADDVERILSETPEYKQVALFSA 195
>UniRef50_Q5KHB7 Cluster: ATP-dependent RNA helicase DBP3; n=2;
Filobasidiella neoformans|Rep: ATP-dependent RNA
helicase DBP3 - Cryptococcus neoformans (Filobasidiella
neoformans)
Length = 605
Score = 66.1 bits (154), Expect = 8e-10
Identities = 31/75 (41%), Positives = 47/75 (62%), Gaps = 1/75 (1%)
Frame = +1
Query: 289 LVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDL-ERGVEIVIATPGRLI 465
LVLAPTRELAQQ + + FG +++ C+FGG K QAR+L ++ +V+ TPGR +
Sbjct: 258 LVLAPTRELAQQSHEHLSAFGEQVGLKSVCIFGGVGKDGQARELSQKDTRVVVGTPGRTL 317
Query: 466 DFLEKGTTNLQRCTF 510
D + G +L ++
Sbjct: 318 DLADSGELDLSSVSY 332
Score = 48.4 bits (110), Expect = 2e-04
Identities = 27/49 (55%), Positives = 33/49 (67%), Gaps = 3/49 (6%)
Frame = +3
Query: 480 GHNQLTAVHILVLDEADRMLDMGFEPQIRKIIEQI---RPDRQTLMWSA 617
G L++V LVLDEADRMLD GFE IR+II + RQT+M+SA
Sbjct: 323 GELDLSSVSYLVLDEADRMLDAGFENDIRRIIAHTPGHKEGRQTVMFSA 371
Score = 33.9 bits (74), Expect = 3.7
Identities = 12/24 (50%), Positives = 19/24 (79%)
Frame = +3
Query: 120 YKEPTPIQAQGWPIAMSGKNLVGV 191
+++PTPIQA WP +S K++VG+
Sbjct: 193 FEKPTPIQACSWPALLSKKDVVGI 216
>UniRef50_Q0C4R1 Cluster: ATP-dependent RNA helicase, DEAD/DEAH box
family; n=1; Hyphomonas neptunium ATCC 15444|Rep:
ATP-dependent RNA helicase, DEAD/DEAH box family -
Hyphomonas neptunium (strain ATCC 15444)
Length = 708
Score = 65.7 bits (153), Expect = 1e-09
Identities = 35/91 (38%), Positives = 56/91 (61%), Gaps = 1/91 (1%)
Frame = +1
Query: 217 GLHLASHCAHKQPPPIRRGDGPIALVLAPTRELAQQI-QQVAADFGHTSYVRNTCVFGGA 393
GL +A+ + + R P+ L++APTRELA Q+ +++ + +T+ TCV GG
Sbjct: 55 GLAIANELLGGEDTFLIRAATPLGLIIAPTRELALQVARELRWLYANTNAEIATCV-GGM 113
Query: 394 PKREQARDLERGVEIVIATPGRLIDFLEKGT 486
R++ R LERG IV+ TPGRL+D + +G+
Sbjct: 114 DMRDERRALERGAHIVVGTPGRLVDHINRGS 144
Score = 48.4 bits (110), Expect = 2e-04
Identities = 21/49 (42%), Positives = 33/49 (67%)
Frame = +3
Query: 471 LGKGHNQLTAVHILVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSA 617
+ +G +A+ +VLDEAD MLD+GF ++ I+E +R+TLM+SA
Sbjct: 140 INRGSFDTSAIRAVVLDEADEMLDLGFREELELILEDTPKERRTLMFSA 188
>UniRef50_Q9GV12 Cluster: Vasa-related protein CnVAS2; n=14;
Eumetazoa|Rep: Vasa-related protein CnVAS2 - Hydra
magnipapillata (Hydra)
Length = 890
Score = 65.7 bits (153), Expect = 1e-09
Identities = 30/77 (38%), Positives = 45/77 (58%)
Frame = +1
Query: 280 PIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGR 459
P+A +LAPTREL Q+ A F + S ++ ++GG QA L G +++ATPGR
Sbjct: 530 PLAAILAPTRELVVQLFTEARKFSYNSSLKPVVLYGGVAVAHQADRLRMGCHLLVATPGR 589
Query: 460 LIDFLEKGTTNLQRCTF 510
L DF+++G N Q +
Sbjct: 590 LEDFIKRGKVNFQNLKY 606
Score = 44.8 bits (101), Expect = 0.002
Identities = 26/54 (48%), Positives = 34/54 (62%), Gaps = 4/54 (7%)
Frame = +3
Query: 468 FLGKGHNQLTAVHILVLDEADRMLDMGFEPQIRKIIE--QIRPD--RQTLMWSA 617
F+ +G + L+LDEAD+M+DMGF PQI IIE + P R TLM+SA
Sbjct: 593 FIKRGKVNFQNLKYLILDEADKMIDMGFGPQIEHIIEFSGMPPKGIRNTLMFSA 646
Score = 37.9 bits (84), Expect = 0.23
Identities = 18/54 (33%), Positives = 28/54 (51%)
Frame = +3
Query: 24 VTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLV 185
+ +SG PIQ F EAN + + YKEPTPIQ P ++ ++++
Sbjct: 438 IELSGTNRPKPIQSFSEANLHPVCLKNLDLAKYKEPTPIQKYAIPAILAKRDVM 491
>UniRef50_Q4W7T7 Cluster: VASA RNA helicase; n=3; Daphniidae|Rep:
VASA RNA helicase - Moina macrocopa
Length = 843
Score = 65.7 bits (153), Expect = 1e-09
Identities = 30/77 (38%), Positives = 44/77 (57%)
Frame = +1
Query: 280 PIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGR 459
P ++++PTRELA QI + A F H S +++ V+GG Q L G I++ TPGR
Sbjct: 487 PEVVIISPTRELAIQIHREARKFSHNSVLKSVIVYGGTQVSHQKSSLMNGCNILVGTPGR 546
Query: 460 LIDFLEKGTTNLQRCTF 510
L DF++KG + F
Sbjct: 547 LKDFVDKGFIDFSNVQF 563
Score = 41.9 bits (94), Expect = 0.014
Identities = 21/61 (34%), Positives = 32/61 (52%)
Frame = +3
Query: 3 ARGNNHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNL 182
A N + V+G V N I FE A D V Q +K GY +PTP+Q + ++ ++L
Sbjct: 390 ANFENAILQVTGNNVPNYITSFETAGLRDLVLQNIKASGYTKPTPVQKGAIAVVLARRDL 449
Query: 183 V 185
+
Sbjct: 450 I 450
Score = 39.9 bits (89), Expect = 0.056
Identities = 25/54 (46%), Positives = 31/54 (57%), Gaps = 4/54 (7%)
Frame = +3
Query: 468 FLGKGHNQLTAVHILVLDEADRMLDMGFEPQIRKIIEQ--IRP--DRQTLMWSA 617
F+ KG + V +LDEADRMLDMGF I I + + P R TLM+SA
Sbjct: 550 FVDKGFIDFSNVQFFILDEADRMLDMGFGSDIEFIAQHPTMTPVGRRVTLMFSA 603
>UniRef50_Q4UE18 Cluster: RNA helicase, putative; n=2;
Theileria|Rep: RNA helicase, putative - Theileria
annulata
Length = 620
Score = 65.7 bits (153), Expect = 1e-09
Identities = 37/92 (40%), Positives = 50/92 (54%), Gaps = 8/92 (8%)
Frame = +1
Query: 259 PIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRN--------TCVFGGAPKREQAR 414
PI +GP LV+ P+RELA QI + F T Y+ N +CV GG ++Q
Sbjct: 259 PIESREGPFGLVICPSRELASQISDITKYF--TGYIYNYGGPKLYCSCVIGGTDIKDQEF 316
Query: 415 DLERGVEIVIATPGRLIDFLEKGTTNLQRCTF 510
++ GV +VIATPGRL FL NL +C +
Sbjct: 317 TIKSGVHMVIATPGRLNYFLNSRIINLTQCRY 348
Score = 43.2 bits (97), Expect = 0.006
Identities = 22/58 (37%), Positives = 31/58 (53%)
Frame = +3
Query: 459 IN*FLGKGHNQLTAVHILVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSAYLAQK 632
+N FL LT L DEADR +D+GF+ +I I QTL++SA ++ K
Sbjct: 332 LNYFLNSRIINLTQCRYLCFDEADRTIDLGFDTEINGIFNHFNNQHQTLLFSATMSIK 389
Score = 38.7 bits (86), Expect = 0.13
Identities = 19/56 (33%), Positives = 30/56 (53%)
Frame = +3
Query: 24 VTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGV 191
+ VSG +V PI FE+ P + + + EPT IQ Q P + G++++GV
Sbjct: 177 IDVSGDQVPPPILNFEDMKLPKPILKALNHKKIFEPTKIQMQALPSVLLGRDVIGV 232
>UniRef50_A7SE71 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 411
Score = 65.7 bits (153), Expect = 1e-09
Identities = 32/84 (38%), Positives = 45/84 (53%)
Frame = +1
Query: 259 PIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEI 438
P GD P+AL+L PTREL QQ+ ++ V GG P Q L G ++
Sbjct: 107 PSNPGDTPVALILTPTRELMQQVFMNVSEMLDVIRCPGNPVCGGVPVSTQTIALREGADV 166
Query: 439 VIATPGRLIDFLEKGTTNLQRCTF 510
V+ATPGRL+D ++G L + T+
Sbjct: 167 VVATPGRLLDLCKRGALCLDKITY 190
Score = 46.8 bits (106), Expect = 5e-04
Identities = 26/53 (49%), Positives = 32/53 (60%), Gaps = 3/53 (5%)
Frame = +3
Query: 492 LTAVHILVLDEADRMLDMGFEPQIRKII---EQIRPDRQTLMWSAYLAQKKXR 641
L + LV+DEADRML MG E Q+RKI+ RQTL+WSA L + R
Sbjct: 185 LDKITYLVMDEADRMLGMGMEEQLRKIVGLATGTSRARQTLLWSATLPESLER 237
Score = 42.7 bits (96), Expect = 0.008
Identities = 21/73 (28%), Positives = 36/73 (49%)
Frame = +3
Query: 24 VTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVLKRV 203
+ + G + PI+ F + N P + + ++ PTPIQ Q MSG++++G+ +
Sbjct: 28 IHIEGEDCPKPIESFHDLNLPPELSTYLAKKNFQVPTPIQMQSLSCVMSGRDIIGLAETG 87
Query: 204 PAKRWPTSCQPLC 242
K S PLC
Sbjct: 88 SGKTLAYSL-PLC 99
>UniRef50_A7TRT2 Cluster: Putative uncharacterized protein; n=1;
Vanderwaltozyma polyspora DSM 70294|Rep: Putative
uncharacterized protein - Vanderwaltozyma polyspora DSM
70294
Length = 605
Score = 65.7 bits (153), Expect = 1e-09
Identities = 35/81 (43%), Positives = 51/81 (62%), Gaps = 5/81 (6%)
Frame = +1
Query: 250 QPPPIRRGDGPIALVLAPTRELAQQIQQ-----VAADFGHTSYVRNTCVFGGAPKREQAR 414
+P ++ +GP AL+LAPTRELAQQIQ ++ + + + C+ GG E +
Sbjct: 257 RPLSLKVIEGPKALILAPTRELAQQIQAEIKKILSLSSNELTKITSICIVGGHSIEEISY 316
Query: 415 DLERGVEIVIATPGRLIDFLE 477
DL +G +I++ATPGRLID LE
Sbjct: 317 DLSKGCDILVATPGRLIDCLE 337
Score = 37.1 bits (82), Expect = 0.40
Identities = 14/29 (48%), Positives = 23/29 (79%)
Frame = +3
Query: 501 VHILVLDEADRMLDMGFEPQIRKIIEQIR 587
V+ +VLDEAD+M+D GFE Q+ I+ +++
Sbjct: 346 VNTIVLDEADKMIDFGFEDQVTTILSKLQ 374
>UniRef50_Q9V3C0 Cluster: ATP-dependent RNA helicase abstrakt; n=7;
Eukaryota|Rep: ATP-dependent RNA helicase abstrakt -
Drosophila melanogaster (Fruit fly)
Length = 619
Score = 65.7 bits (153), Expect = 1e-09
Identities = 33/90 (36%), Positives = 48/90 (53%), Gaps = 6/90 (6%)
Frame = +1
Query: 259 PIRRGDGPIALVLAPTRELAQQIQQVAADFG-HTSY-----VRNTCVFGGAPKREQARDL 420
P R +GP L++ P+RELA+Q ++ + H +R+ GG P E +
Sbjct: 247 PFERNEGPYGLIICPSRELAKQTHEIIQHYSKHLQACGMPEIRSCLAMGGLPVSEALDVI 306
Query: 421 ERGVEIVIATPGRLIDFLEKGTTNLQRCTF 510
RGV IV+ATPGRL+D L+K L C +
Sbjct: 307 SRGVHIVVATPGRLMDMLDKKILTLDMCRY 336
Score = 52.4 bits (120), Expect = 1e-05
Identities = 22/56 (39%), Positives = 32/56 (57%)
Frame = +3
Query: 24 VTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGV 191
+ V G PI+ F E FP + G+ G K PTPIQ QG P ++G++L+G+
Sbjct: 165 ILVEGETPSPPIRSFREMKFPKGILNGLAAKGIKNPTPIQVQGLPTVLAGRDLIGI 220
Score = 47.6 bits (108), Expect = 3e-04
Identities = 21/41 (51%), Positives = 29/41 (70%)
Frame = +3
Query: 510 LVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSAYLAQK 632
L +DEADRM+DMGFE +R I + RQTL++SA + +K
Sbjct: 337 LCMDEADRMIDMGFEEDVRTIFSFFKGQRQTLLFSATMPKK 377
>UniRef50_Q480Z7 Cluster: ATP-dependent RNA helicase, DEAD box
family; n=2; Alteromonadales|Rep: ATP-dependent RNA
helicase, DEAD box family - Colwellia psychrerythraea
(strain 34H / ATCC BAA-681) (Vibriopsychroerythus)
Length = 399
Score = 65.3 bits (152), Expect = 1e-09
Identities = 29/71 (40%), Positives = 45/71 (63%)
Frame = +1
Query: 286 ALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLI 465
+L+L PTRELA QI Q D+ ++ V+GG ++ Q +E G++I++ATPGRL+
Sbjct: 78 SLILTPTRELASQIMQNIDDYSDGLGLKTKVVYGGVGRQAQVDSIELGLDILVATPGRLL 137
Query: 466 DFLEKGTTNLQ 498
D +E G N +
Sbjct: 138 DLIETGDINFK 148
Score = 47.2 bits (107), Expect = 4e-04
Identities = 22/46 (47%), Positives = 30/46 (65%)
Frame = +3
Query: 480 GHNQLTAVHILVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSA 617
G A+ + VLDEAD MLDMGF ++ II ++ RQTL++SA
Sbjct: 143 GDINFKALEVFVLDEADTMLDMGFFKDVQSIISKLPKSRQTLLFSA 188
Score = 33.5 bits (73), Expect = 4.9
Identities = 13/29 (44%), Positives = 20/29 (68%)
Frame = +3
Query: 105 VKTMGYKEPTPIQAQGWPIAMSGKNLVGV 191
V GYK+PTPIQ + P ++G +L+G+
Sbjct: 17 VNLKGYKQPTPIQKECIPALINGNDLLGI 45
>UniRef50_Q185X0 Cluster: ATP-dependent RNA helicase; n=3;
Clostridium difficile|Rep: ATP-dependent RNA helicase -
Clostridium difficile (strain 630)
Length = 497
Score = 65.3 bits (152), Expect = 1e-09
Identities = 28/75 (37%), Positives = 48/75 (64%)
Frame = +1
Query: 286 ALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLI 465
AL++ PTRELA Q++ +D G VR + +FG ++Q +L++ V IV+ATPGR++
Sbjct: 74 ALIVVPTRELALQVKDEISDIGRLKKVRCSAIFGKQSIKDQIAELKQRVHIVVATPGRIL 133
Query: 466 DFLEKGTTNLQRCTF 510
D + +G+ L+ +
Sbjct: 134 DHINRGSIKLENVKY 148
Score = 36.7 bits (81), Expect = 0.53
Identities = 17/54 (31%), Positives = 33/54 (61%)
Frame = +3
Query: 471 LGKGHNQLTAVHILVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSAYLAQK 632
+ +G +L V LV+DEAD+M + GF Q+ KI+ + ++ ++SA + ++
Sbjct: 136 INRGSIKLENVKYLVIDEADKMFNKGFVEQMEKILLNLPKEKIVSLFSATIDEE 189
>UniRef50_Q6FML5 Cluster: Pre-mRNA-processing ATP-dependent RNA
helicase PRP5; n=1; Candida glabrata|Rep:
Pre-mRNA-processing ATP-dependent RNA helicase PRP5 -
Candida glabrata (Yeast) (Torulopsis glabrata)
Length = 816
Score = 65.3 bits (152), Expect = 1e-09
Identities = 36/84 (42%), Positives = 47/84 (55%), Gaps = 1/84 (1%)
Frame = +1
Query: 247 KQPPPIRRGD-GPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLE 423
K +R G+ GPIA++ APTRELA QI + + + C GG+ ++Q L+
Sbjct: 315 KAQKKLRNGETGPIAVIFAPTRELAVQINEEVQKLISDLDISSICCTGGSDLKKQIDKLK 374
Query: 424 RGVEIVIATPGRLIDFLEKGTTNL 495
GVEI IATPGR ID L NL
Sbjct: 375 TGVEIAIATPGRFIDLLSLNGGNL 398
Score = 53.6 bits (123), Expect = 4e-06
Identities = 21/44 (47%), Positives = 31/44 (70%)
Frame = +3
Query: 501 VHILVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSAYLAQK 632
+ +V+DEADR+ D GFEPQI ++ +RPDRQ +++SA K
Sbjct: 404 ISFVVMDEADRLFDFGFEPQIASVLRTVRPDRQCVLFSATFPSK 447
Score = 37.1 bits (82), Expect = 0.40
Identities = 17/59 (28%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
Frame = +3
Query: 24 VTVSGVEVHNPIQYFEEANFPDYVQQGVKTM-GYKEPTPIQAQGWPIAMSGKNLVGVLK 197
+ + G + P+ + + P + + +K + YK TPIQ Q P MSG++++G+ K
Sbjct: 239 IKIEGKDCPRPVTKWSQLGIPYDIIRFIKDVFSYKSLTPIQTQTIPAIMSGRDVIGISK 297
>UniRef50_Q5KNF8 Cluster: Pre-mRNA-splicing ATP-dependent RNA
helicase PRP28; n=1; Filobasidiella neoformans|Rep:
Pre-mRNA-splicing ATP-dependent RNA helicase PRP28 -
Cryptococcus neoformans (Filobasidiella neoformans)
Length = 738
Score = 65.3 bits (152), Expect = 1e-09
Identities = 33/78 (42%), Positives = 44/78 (56%)
Frame = +1
Query: 277 GPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPG 456
GP AL++APTRELAQQI+ F + + GG EQ L G EI+IATPG
Sbjct: 391 GPYALIMAPTRELAQQIETETRRFALPLGYKCVSIVGGRSVEEQQFALRDGAEIIIATPG 450
Query: 457 RLIDFLEKGTTNLQRCTF 510
RL D ++K + +C +
Sbjct: 451 RLKDMVDKSILVMSQCRY 468
Score = 49.6 bits (113), Expect = 7e-05
Identities = 20/58 (34%), Positives = 35/58 (60%)
Frame = +3
Query: 24 VTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVLK 197
+ G + +P++ + E+ P + ++ +GYKEP+PIQ Q PI M ++L+GV K
Sbjct: 303 IAARGGGIPHPLRNWRESAIPSQILDIIEEIGYKEPSPIQRQAIPIGMQNRDLIGVAK 360
>UniRef50_Q89IS2 Cluster: Cold-shock dead-box protein A; n=28;
Alphaproteobacteria|Rep: Cold-shock dead-box protein A -
Bradyrhizobium japonicum
Length = 650
Score = 64.9 bits (151), Expect = 2e-09
Identities = 35/77 (45%), Positives = 49/77 (63%), Gaps = 1/77 (1%)
Frame = +1
Query: 268 RGDGPIALVLAPTRELAQQIQ-QVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVI 444
R P+AL++APTRELA Q+Q ++A + H +CV G P+REQ R+L G IV+
Sbjct: 70 RAGAPLALIVAPTRELALQVQRELAWLYEHADGRVVSCVGGMDPRREQ-RELAAGAHIVV 128
Query: 445 ATPGRLIDFLEKGTTNL 495
TPGRL D L +G ++
Sbjct: 129 GTPGRLCDHLRRGRLDI 145
Score = 40.3 bits (90), Expect = 0.043
Identities = 19/49 (38%), Positives = 31/49 (63%)
Frame = +3
Query: 471 LGKGHNQLTAVHILVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSA 617
L +G ++ + +VLDEAD ML++GF + I+E R+TL++SA
Sbjct: 138 LRRGRLDISELKAVVLDEADEMLNLGFREDMEFILETTPETRRTLLFSA 186
>UniRef50_Q6A6U7 Cluster: ATP-dependent RNA helicase; n=3;
Actinomycetales|Rep: ATP-dependent RNA helicase -
Propionibacterium acnes
Length = 700
Score = 64.9 bits (151), Expect = 2e-09
Identities = 31/77 (40%), Positives = 45/77 (58%)
Frame = +1
Query: 265 RRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVI 444
R + P AL+L+PTRELA QI + + + + GG Q + +RGV++V+
Sbjct: 296 REDNRPRALILSPTRELAMQIADALSSLASSMGLSTILIAGGMSYGPQTKAFKRGVDLVV 355
Query: 445 ATPGRLIDFLEKGTTNL 495
ATPGRL+D LE G +L
Sbjct: 356 ATPGRLVDLLETGDADL 372
Score = 41.1 bits (92), Expect = 0.024
Identities = 21/51 (41%), Positives = 30/51 (58%)
Frame = +3
Query: 471 LGKGHNQLTAVHILVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSAYL 623
L G L+ V + VLDEAD M ++GF + I++ I D Q L++SA L
Sbjct: 365 LETGDADLSGVAVTVLDEADHMAELGFMEAVGSILDAIPADGQRLLFSATL 415
>UniRef50_Q5NML9 Cluster: DNA and RNA helicase; n=28;
Alphaproteobacteria|Rep: DNA and RNA helicase -
Zymomonas mobilis
Length = 458
Score = 64.9 bits (151), Expect = 2e-09
Identities = 32/75 (42%), Positives = 45/75 (60%)
Frame = +1
Query: 256 PPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVE 435
P R G L+L+PTRELA QI + D+ + VFGG P Q R L+RG +
Sbjct: 72 PQARPQRGCRMLILSPTRELASQIARACNDYTRHLRMSVNAVFGGVPIGRQMRMLDRGTD 131
Query: 436 IVIATPGRLIDFLEK 480
I++ATPGRL+D +++
Sbjct: 132 ILVATPGRLLDLIDQ 146
Score = 54.8 bits (126), Expect = 2e-06
Identities = 49/186 (26%), Positives = 80/186 (43%), Gaps = 2/186 (1%)
Frame = +3
Query: 66 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVLKRVPAKRWPTSCQPLCT 245
F+ + Q + +GY +PTPIQAQ P + GK+L G+ + K P
Sbjct: 8 FKTLGLDSSLVQALDGLGYSKPTPIQAQAIPHLLEGKDLCGIAQTGTGKT-AAFALPSIH 66
Query: 246 *TTTAYSER*WSDC--FGLGAYQRVSTTNSASCCRFWTHILCS*HVCVWWCS*KRASPGL 419
T R C L + +++ + +C + H+ S + R L
Sbjct: 67 YLATNPQARPQRGCRMLILSPTRELASQIARACNDYTRHLRMSVNAVFGGVPIGRQMRML 126
Query: 420 GEGSRNSHCYSR*IN*FLGKGHNQLTAVHILVLDEADRMLDMGFEPQIRKIIEQIRPDRQ 599
G+ + + + L V + VLDEAD+MLD+GF +R+I + + +RQ
Sbjct: 127 DRGTDILVATPGRLLDLIDQRALVLKDVEVFVLDEADQMLDLGFIHALRRIDKLLPKNRQ 186
Query: 600 TLMWSA 617
TL +SA
Sbjct: 187 TLFFSA 192
>UniRef50_O54116 Cluster: Probable DEAD-box RNA helicase; n=10;
Streptomyces|Rep: Probable DEAD-box RNA helicase -
Streptomyces coelicolor
Length = 498
Score = 64.9 bits (151), Expect = 2e-09
Identities = 36/95 (37%), Positives = 51/95 (53%)
Frame = +1
Query: 217 GLHLASHCAHKQPPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAP 396
GL L + A ++ P + P+ LVL PTRELAQQ+ + + +R V GG
Sbjct: 124 GLALLARTAGRRAEPRQ----PLGLVLVPTRELAQQVTDALTPYARSVKLRLATVVGGMS 179
Query: 397 KREQARDLERGVEIVIATPGRLIDFLEKGTTNLQR 501
QA L G E+V+ATPGRL D +++G L +
Sbjct: 180 IGRQASALRGGAEVVVATPGRLKDLIDRGDCRLNQ 214
Score = 55.2 bits (127), Expect = 1e-06
Identities = 23/51 (45%), Positives = 37/51 (72%)
Frame = +3
Query: 471 LGKGHNQLTAVHILVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSAYL 623
+ +G +L V + VLDEAD+M DMGF PQ+ +++Q+RP+ Q +++SA L
Sbjct: 205 IDRGDCRLNQVSVTVLDEADQMADMGFMPQVTALLDQVRPEGQRMLFSATL 255
>UniRef50_Q26CN9 Cluster: ATP-dependent RNA helicase; n=1;
Flavobacteria bacterium BBFL7|Rep: ATP-dependent RNA
helicase - Flavobacteria bacterium BBFL7
Length = 644
Score = 64.9 bits (151), Expect = 2e-09
Identities = 34/71 (47%), Positives = 45/71 (63%), Gaps = 1/71 (1%)
Frame = +1
Query: 286 ALVLAPTRELAQQI-QQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRL 462
AL+LAPTRELAQQI Q+ H + VFGGA Q RD+ RG +I++ATPGRL
Sbjct: 85 ALILAPTRELAQQICGQMEQMSKHLGKLNVVPVFGGANIMNQIRDIRRGAQIIVATPGRL 144
Query: 463 IDFLEKGTTNL 495
+D +++ L
Sbjct: 145 MDLMKRREVKL 155
Score = 38.3 bits (85), Expect = 0.17
Identities = 20/51 (39%), Positives = 32/51 (62%)
Frame = +3
Query: 489 QLTAVHILVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSAYLAQKKXR 641
+L A+ +VLDEAD ML+MGF+ I I+ + R ++SA +A++ R
Sbjct: 154 KLDALKYMVLDEADEMLNMGFKEDIDFILSKSDTGRNIWLFSATMAREIKR 204
>UniRef50_Q0AR94 Cluster: DEAD/DEAH box helicase domain protein;
n=4; Proteobacteria|Rep: DEAD/DEAH box helicase domain
protein - Maricaulis maris (strain MCS10)
Length = 787
Score = 64.9 bits (151), Expect = 2e-09
Identities = 35/79 (44%), Positives = 51/79 (64%), Gaps = 1/79 (1%)
Frame = +1
Query: 268 RGDGPIALVLAPTRELAQQIQ-QVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVI 444
R D P+AL++APTRELA Q+Q ++A +G +CV GG R + + LERG IV+
Sbjct: 71 RPDLPMALIVAPTRELALQVQRELAWLYGEARGQIASCV-GGMDPRAERKALERGCHIVV 129
Query: 445 ATPGRLIDFLEKGTTNLQR 501
TPGRL D +E+G ++ +
Sbjct: 130 GTPGRLRDHIERGALDMSQ 148
Score = 39.9 bits (89), Expect = 0.056
Identities = 18/47 (38%), Positives = 29/47 (61%)
Frame = +3
Query: 477 KGHNQLTAVHILVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSA 617
+G ++ + +VLDEAD MLD GF + I++ R+TL++SA
Sbjct: 141 RGALDMSQLKAVVLDEADEMLDFGFREDLEYILDAAPASRRTLLFSA 187
>UniRef50_A6TUK6 Cluster: DEAD/DEAH box helicase domain protein;
n=2; Firmicutes|Rep: DEAD/DEAH box helicase domain
protein - Alkaliphilus metalliredigens QYMF
Length = 484
Score = 64.9 bits (151), Expect = 2e-09
Identities = 30/69 (43%), Positives = 45/69 (65%)
Frame = +1
Query: 280 PIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGR 459
P ALVL PTRELA Q+++ + G ++ V+G AP Q ++L++ +V+ TPGR
Sbjct: 73 PQALVLVPTRELAIQVKEDMFNIGRFKRLKVAAVYGKAPFYHQEKELKQKTHVVVGTPGR 132
Query: 460 LIDFLEKGT 486
+ID +EKGT
Sbjct: 133 IIDHMEKGT 141
Score = 40.7 bits (91), Expect = 0.032
Identities = 20/47 (42%), Positives = 28/47 (59%)
Frame = +3
Query: 477 KGHNQLTAVHILVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSA 617
KG + + LV+DEAD M +MGF QI II+ + R T++ SA
Sbjct: 139 KGTFDTSQIKYLVIDEADEMFNMGFVDQIETIIKDLSKKRVTMLLSA 185
>UniRef50_A2U4F0 Cluster: Putative ATP-dependent RNA helicase; n=2;
Polaribacter|Rep: Putative ATP-dependent RNA helicase -
Polaribacter dokdonensis MED152
Length = 411
Score = 64.9 bits (151), Expect = 2e-09
Identities = 33/72 (45%), Positives = 45/72 (62%)
Frame = +1
Query: 286 ALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLI 465
ALV+ PTRELA QI + + S +R+T VFGG Q L +GV+I++ATPGRLI
Sbjct: 78 ALVITPTRELAIQILENFKSYSKYSNLRSTAVFGGVSLEPQKEILAKGVDILVATPGRLI 137
Query: 466 DFLEKGTTNLQR 501
D +G +L +
Sbjct: 138 DLQMQGNIDLSQ 149
Score = 46.8 bits (106), Expect = 5e-04
Identities = 24/52 (46%), Positives = 35/52 (67%)
Frame = +3
Query: 477 KGHNQLTAVHILVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSAYLAQK 632
+G+ L+ + I VLDEAD MLDMGF I+KI + +QTL++SA + +K
Sbjct: 142 QGNIDLSQLEIFVLDEADLMLDMGFINDIKKIEKLCPRKKQTLLFSATIPEK 193
>UniRef50_A1SQH8 Cluster: DEAD/DEAH box helicase domain protein
precursor; n=2; Actinomycetales|Rep: DEAD/DEAH box
helicase domain protein precursor - Nocardioides sp.
(strain BAA-499 / JS614)
Length = 507
Score = 64.9 bits (151), Expect = 2e-09
Identities = 32/74 (43%), Positives = 44/74 (59%)
Frame = +1
Query: 280 PIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGR 459
P ALVLAPTREL QI++ T+ + VFGG + Q + L RG +IV+A PGR
Sbjct: 82 PRALVLAPTRELVNQIEEALKPLARTAGLTTQTVFGGVGQNPQVQGLRRGADIVLACPGR 141
Query: 460 LIDFLEKGTTNLQR 501
L D + +G +L +
Sbjct: 142 LEDLIGQGHCDLSQ 155
Score = 54.0 bits (124), Expect = 3e-06
Identities = 25/51 (49%), Positives = 36/51 (70%)
Frame = +3
Query: 471 LGKGHNQLTAVHILVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSAYL 623
+G+GH L+ V I VLDEAD M D+GF P +R+I+++ D Q L++SA L
Sbjct: 146 IGQGHCDLSQVEITVLDEADHMADLGFLPGVRRIMDRTPRDGQRLLFSATL 196
Score = 35.1 bits (77), Expect = 1.6
Identities = 15/46 (32%), Positives = 26/46 (56%)
Frame = +2
Query: 110 DNGLQRTDAYSSSRLADSYVWKEFSWRTQTGSGKTLAYILPAIVHI 247
D G+ + ++ L DS ++ R +TGSGKT A++LP + +
Sbjct: 25 DRGIVQPTPIQAATLPDSLAGRDVLGRGRTGSGKTYAFLLPLVARL 70
>UniRef50_Q4UBV5 Cluster: DEAD-box family (RNA) helicase, putative;
n=2; Theileria|Rep: DEAD-box family (RNA) helicase,
putative - Theileria annulata
Length = 797
Score = 64.9 bits (151), Expect = 2e-09
Identities = 30/67 (44%), Positives = 43/67 (64%)
Frame = +1
Query: 280 PIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGR 459
P+ LVL+PTRELA Q + F + +R ++GG+ R Q +LERG +I +ATPGR
Sbjct: 330 PVCLVLSPTRELAVQTYTESRKFNFGTGIRTVVLYGGSEVRRQLIELERGCDICVATPGR 389
Query: 460 LIDFLEK 480
L D +E+
Sbjct: 390 LTDLVER 396
Score = 42.7 bits (96), Expect = 0.008
Identities = 18/27 (66%), Positives = 22/27 (81%)
Frame = +3
Query: 495 TAVHILVLDEADRMLDMGFEPQIRKII 575
+ + LVLDEADRMLDMGF PQI+ I+
Sbjct: 402 SCIKYLVLDEADRMLDMGFSPQIKSIL 428
>UniRef50_Q978T9 Cluster: ATP-dependent RNA helicase; n=3;
Thermoplasma|Rep: ATP-dependent RNA helicase -
Thermoplasma volcanium
Length = 373
Score = 64.9 bits (151), Expect = 2e-09
Identities = 28/75 (37%), Positives = 45/75 (60%)
Frame = +1
Query: 286 ALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLI 465
AL+L PTRELA Q+ +V+ G S +R V+GG +Q + RG I++ TPGR +
Sbjct: 72 ALILLPTRELAVQVAKVSEALGKRSGIRTVVVYGGVSINKQIELILRGANIIVGTPGRTL 131
Query: 466 DFLEKGTTNLQRCTF 510
D +++G N + ++
Sbjct: 132 DLIDRGILNFDKVSY 146
Score = 44.0 bits (99), Expect = 0.003
Identities = 22/49 (44%), Positives = 30/49 (61%)
Frame = +3
Query: 471 LGKGHNQLTAVHILVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSA 617
+ +G V VLDEAD MLDMGF I+KII + +RQ+ ++SA
Sbjct: 134 IDRGILNFDKVSYFVLDEADEMLDMGFIEDIKKIINVLPVERQSFLFSA 182
Score = 39.1 bits (87), Expect = 0.099
Identities = 16/40 (40%), Positives = 26/40 (65%)
Frame = +3
Query: 66 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLV 185
FEE N + + + ++ GY EPT +Q+ PIA++G +LV
Sbjct: 4 FEEFNLRNELIESIRGTGYSEPTEVQSMAIPIALAGSDLV 43
>UniRef50_Q7A4G0 Cluster: Probable DEAD-box ATP-dependent RNA
helicase SA1885; n=13; Staphylococcus|Rep: Probable
DEAD-box ATP-dependent RNA helicase SA1885 -
Staphylococcus aureus (strain N315)
Length = 506
Score = 64.9 bits (151), Expect = 2e-09
Identities = 31/70 (44%), Positives = 44/70 (62%)
Frame = +1
Query: 277 GPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPG 456
G +L+LAPTRELA Q+ + +F V+ VFGG P Q + L++G +IV+ TPG
Sbjct: 69 GVQSLILAPTRELAMQVAEQLREFSRGQGVQVVTVFGGMPIERQIKALKKGPQIVVGTPG 128
Query: 457 RLIDFLEKGT 486
R+ID L + T
Sbjct: 129 RVIDHLNRRT 138
Score = 43.2 bits (97), Expect = 0.006
Identities = 18/44 (40%), Positives = 28/44 (63%)
Frame = +3
Query: 57 IQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVG 188
+Q F+E D Q +++MG+KEPTPIQ P A+ G +++G
Sbjct: 1 MQNFKELGISDNTVQSLESMGFKEPTPIQKDSIPYALQGIDILG 44
Score = 41.1 bits (92), Expect = 0.024
Identities = 19/40 (47%), Positives = 30/40 (75%), Gaps = 1/40 (2%)
Frame = +3
Query: 501 VHILVLDEADRMLDMGFEPQIRKIIEQI-RPDRQTLMWSA 617
+H L+LDEAD M++MGF +R I+++I RQT+++SA
Sbjct: 144 IHTLILDEADEMMNMGFIDDMRFIMDKIPAVQRQTMLFSA 183
>UniRef50_Q0UHM7 Cluster: ATP-dependent RNA helicase DBP7; n=1;
Phaeosphaeria nodorum|Rep: ATP-dependent RNA helicase
DBP7 - Phaeosphaeria nodorum (Septoria nodorum)
Length = 831
Score = 64.9 bits (151), Expect = 2e-09
Identities = 32/79 (40%), Positives = 47/79 (59%), Gaps = 1/79 (1%)
Frame = +1
Query: 244 HKQPPPIRRGDGPIALVLAPTRELAQQIQQVAADF-GHTSYVRNTCVFGGAPKREQARDL 420
HK ++R G A+++APTREL++QI V G ++ T V GG K+ + L
Sbjct: 259 HKDDDAVQRNSGLFAIIMAPTRELSKQIALVLEKLLGCAHWLVATTVIGGEKKKSEKARL 318
Query: 421 ERGVEIVIATPGRLIDFLE 477
+G+ I++ATPGRL D LE
Sbjct: 319 RKGINILVATPGRLADHLE 337
Score = 35.5 bits (78), Expect = 1.2
Identities = 14/25 (56%), Positives = 21/25 (84%)
Frame = +3
Query: 501 VHILVLDEADRMLDMGFEPQIRKII 575
V LVLDE DR++++GFE +I+KI+
Sbjct: 347 VRWLVLDEGDRLMELGFEQEIQKIV 371
>UniRef50_Q64VR8 Cluster: ATP-dependent RNA helicase DeaD; n=14;
Bacteria|Rep: ATP-dependent RNA helicase DeaD -
Bacteroides fragilis
Length = 427
Score = 64.5 bits (150), Expect = 2e-09
Identities = 30/75 (40%), Positives = 47/75 (62%)
Frame = +1
Query: 286 ALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLI 465
ALVL PTRELA QI + +G + +++ +FGG ++ Q L G++I++ATPGRL+
Sbjct: 74 ALVLTPTRELAIQIGESFEAYGRYTGLKHAVIFGGVGQKPQTDALRSGIQILVATPGRLL 133
Query: 466 DFLEKGTTNLQRCTF 510
D + +G +L F
Sbjct: 134 DLISQGFISLSSLDF 148
Score = 48.4 bits (110), Expect = 2e-04
Identities = 23/49 (46%), Positives = 34/49 (69%)
Frame = +3
Query: 471 LGKGHNQLTAVHILVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSA 617
+ +G L+++ VLDEADRMLDMGF I++I++ + RQTL +SA
Sbjct: 136 ISQGFISLSSLDFFVLDEADRMLDMGFIHDIKRILKLLPARRQTLFFSA 184
Score = 40.3 bits (90), Expect = 0.043
Identities = 17/41 (41%), Positives = 25/41 (60%)
Frame = +3
Query: 66 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVG 188
FE N + + + ++ GY PTPIQ Q PI + GK+L+G
Sbjct: 3 FENLNLIEPILKALRQEGYTSPTPIQEQSIPILLQGKDLLG 43
>UniRef50_Q0AVQ9 Cluster: ATP-dependent RNA helicase; n=1;
Syntrophomonas wolfei subsp. wolfei str. Goettingen|Rep:
ATP-dependent RNA helicase - Syntrophomonas wolfei
subsp. wolfei (strain Goettingen)
Length = 530
Score = 64.5 bits (150), Expect = 2e-09
Identities = 30/76 (39%), Positives = 45/76 (59%)
Frame = +1
Query: 268 RGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIA 447
+G+G ALVL PTRELA Q+ + + ++ ++GG Q R L R EI++
Sbjct: 68 KGEGLQALVLCPTRELAVQVTEEISSLSRRMRIQVLAIYGGQSIELQLRSLRRNPEIIVG 127
Query: 448 TPGRLIDFLEKGTTNL 495
TPGRL+D + +GT +L
Sbjct: 128 TPGRLMDHMNRGTISL 143
Score = 52.4 bits (120), Expect = 1e-05
Identities = 25/51 (49%), Positives = 35/51 (68%)
Frame = +3
Query: 471 LGKGHNQLTAVHILVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSAYL 623
+ +G L+ + +VLDEAD MLDMGF P I+KI+ Q +RQT ++SA L
Sbjct: 136 MNRGTISLSPLKYVVLDEADEMLDMGFLPDIQKILSQCPRERQTFLFSATL 186
Score = 34.7 bits (76), Expect = 2.1
Identities = 14/30 (46%), Positives = 22/30 (73%)
Frame = +3
Query: 99 QGVKTMGYKEPTPIQAQGWPIAMSGKNLVG 188
Q + G+++PTPIQ + PIAM+G +L+G
Sbjct: 17 QMIDEKGFEKPTPIQVKSIPIAMAGLDLMG 46
>UniRef50_A3PFY9 Cluster: DEAD/DEAH box helicase domain protein;
n=10; Alphaproteobacteria|Rep: DEAD/DEAH box helicase
domain protein - Rhodobacter sphaeroides (strain ATCC
17029 / ATH 2.4.9)
Length = 793
Score = 64.5 bits (150), Expect = 2e-09
Identities = 35/75 (46%), Positives = 48/75 (64%), Gaps = 1/75 (1%)
Frame = +1
Query: 274 DGPIALVLAPTRELAQQI-QQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIAT 450
D PIAL +APTRELA Q+ +++ +G TCV GG R + R L+RG IV+ T
Sbjct: 88 DTPIALAIAPTRELALQVARELGWLYGEAGAHIATCV-GGMDYRTERRALDRGAHIVVGT 146
Query: 451 PGRLIDFLEKGTTNL 495
PGRL D +E+G+ +L
Sbjct: 147 PGRLRDHIERGSLDL 161
Score = 43.2 bits (97), Expect = 0.006
Identities = 20/47 (42%), Positives = 30/47 (63%)
Frame = +3
Query: 477 KGHNQLTAVHILVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSA 617
+G L+ + +VLDEAD MLD+GF + I+ +R+TLM+SA
Sbjct: 156 RGSLDLSGLRAVVLDEADEMLDLGFREDLEFILGSAPEERRTLMFSA 202
>UniRef50_P25888 Cluster: Putative ATP-dependent RNA helicase rhlE;
n=122; cellular organisms|Rep: Putative ATP-dependent
RNA helicase rhlE - Escherichia coli (strain K12)
Length = 454
Score = 64.5 bits (150), Expect = 2e-09
Identities = 36/95 (37%), Positives = 51/95 (53%), Gaps = 1/95 (1%)
Frame = +1
Query: 220 LHLASHCAHKQPPPIRRGDGPI-ALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAP 396
L L H +QP +G P+ AL+L PTRELA QI + D+ +R+ VFGG
Sbjct: 57 LPLLQHLITRQPHA--KGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVS 114
Query: 397 KREQARDLERGVEIVIATPGRLIDFLEKGTTNLQR 501
Q L GV++++ATPGRL+D + L +
Sbjct: 115 INPQMMKLRGGVDVLVATPGRLLDLEHQNAVKLDQ 149
Score = 50.4 bits (115), Expect = 4e-05
Identities = 24/43 (55%), Positives = 32/43 (74%)
Frame = +3
Query: 489 QLTAVHILVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSA 617
+L V ILVLDEADRMLDMGF IR+++ ++ RQ L++SA
Sbjct: 146 KLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAKRQNLLFSA 188
Score = 35.1 bits (77), Expect = 1.6
Identities = 15/34 (44%), Positives = 22/34 (64%)
Frame = +3
Query: 84 PDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLV 185
PD + + V GY+EPTPIQ Q P + G++L+
Sbjct: 10 PD-ILRAVAEQGYREPTPIQQQAIPAVLEGRDLM 42
>UniRef50_Q28T45 Cluster: DEAD/DEAH box helicase-like protein; n=18;
Alphaproteobacteria|Rep: DEAD/DEAH box helicase-like
protein - Jannaschia sp. (strain CCS1)
Length = 644
Score = 64.1 bits (149), Expect = 3e-09
Identities = 50/196 (25%), Positives = 89/196 (45%)
Frame = +3
Query: 54 PIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVLKRVPAKRWPTSCQ 233
P+ F + + VQ+ + GY+ PTPIQA P A++G++++G+ + K +
Sbjct: 9 PMTTFADLDLNPKVQKAIVEAGYESPTPIQAGAIPPALAGRDVLGIAQTGTGKT-ASFTL 67
Query: 234 PLCT*TTTAYSER*WSDCFGLGAYQRVSTTNSASCCRFWTHILCS*HVCVWWCS*KRASP 413
P+ T + L + ++ + + + H+ + + + S K
Sbjct: 68 PMITMLARGRARARMPRSLVLCPTRELAAQVAENFDIYAKHVKLTKALLIGGVSFKEQEQ 127
Query: 414 GLGEGSRNSHCYSR*IN*FLGKGHNQLTAVHILVLDEADRMLDMGFEPQIRKIIEQIRPD 593
+ +G + +G L V ++V+DEADRMLDMGF P I +I +
Sbjct: 128 AIDKGVDVLIATPGRLLDHFERGKLILNDVKVMVVDEADRMLDMGFIPDIERIFGLVPFT 187
Query: 594 RQTLMWSAYLAQKKXR 641
RQTL +SA +A + R
Sbjct: 188 RQTLFFSATMAPEIER 203
Score = 58.8 bits (136), Expect = 1e-07
Identities = 27/68 (39%), Positives = 43/68 (63%)
Frame = +1
Query: 280 PIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGR 459
P +LVL PTRELA Q+ + + + + GG +EQ + +++GV+++IATPGR
Sbjct: 83 PRSLVLCPTRELAAQVAENFDIYAKHVKLTKALLIGGVSFKEQEQAIDKGVDVLIATPGR 142
Query: 460 LIDFLEKG 483
L+D E+G
Sbjct: 143 LLDHFERG 150
>UniRef50_Q1MY97 Cluster: DEAD/DEAH box helicase-like protein; n=2;
Gammaproteobacteria|Rep: DEAD/DEAH box helicase-like
protein - Oceanobacter sp. RED65
Length = 614
Score = 64.1 bits (149), Expect = 3e-09
Identities = 31/74 (41%), Positives = 46/74 (62%), Gaps = 1/74 (1%)
Frame = +1
Query: 280 PIALVLAPTRELAQQIQQVAADFG-HTSYVRNTCVFGGAPKREQARDLERGVEIVIATPG 456
P LVLAPTRELAQQ+ + H S V+ ++GG+ Q R L++G + V+ TPG
Sbjct: 75 PQVLVLAPTRELAQQVAMAVESYSKHESNVKVASIYGGSDFGSQFRALKQGPQWVVGTPG 134
Query: 457 RLIDFLEKGTTNLQ 498
R++D + +GT L+
Sbjct: 135 RVMDHIRRGTLKLE 148
Score = 39.5 bits (88), Expect = 0.075
Identities = 18/52 (34%), Positives = 32/52 (61%)
Frame = +3
Query: 477 KGHNQLTAVHILVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSAYLAQK 632
+G +L + +VLDEAD ML MGF + +++Q+ RQ ++SA + ++
Sbjct: 142 RGTLKLEGIRAVVLDEADEMLRMGFIDDVDWVLDQVPEKRQIALFSATMPKQ 193
Score = 34.7 bits (76), Expect = 2.1
Identities = 13/42 (30%), Positives = 25/42 (59%)
Frame = +3
Query: 66 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGV 191
F P + + ++ GY++P+PIQ Q P + GK+++G+
Sbjct: 8 FASLGLPFNLLRAIEEQGYEQPSPIQEQSIPHLLEGKDVLGL 49
>UniRef50_A3EUK2 Cluster: Superfamily II DNA and RNA helicase; n=1;
Leptospirillum sp. Group II UBA|Rep: Superfamily II DNA
and RNA helicase - Leptospirillum sp. Group II UBA
Length = 444
Score = 64.1 bits (149), Expect = 3e-09
Identities = 35/84 (41%), Positives = 46/84 (54%)
Frame = +1
Query: 244 HKQPPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLE 423
HK R G ALVL+PTRELA QI Q A D+ + + GG Q R+L+
Sbjct: 61 HKIAEGRRHGIRNRALVLSPTRELATQIHQAAKDYAKYLHTNAVLLVGGVDFIRQERNLK 120
Query: 424 RGVEIVIATPGRLIDFLEKGTTNL 495
R +IV+ATPGRL+D + + L
Sbjct: 121 RNWDIVVATPGRLLDHVRRNNLTL 144
Score = 48.8 bits (111), Expect = 1e-04
Identities = 23/46 (50%), Positives = 33/46 (71%), Gaps = 2/46 (4%)
Frame = +3
Query: 486 NQLTAVH--ILVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSA 617
N LT + ++++DEADRMLDMGF P I I+ Q+ RQ+L++SA
Sbjct: 140 NNLTLANTSLVIIDEADRMLDMGFLPDINTIVRQLPKGRQSLLFSA 185
Score = 33.5 bits (73), Expect = 4.9
Identities = 13/42 (30%), Positives = 23/42 (54%)
Frame = +3
Query: 66 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGV 191
FE + + + +G+ PTPIQ Q P + G++L+G+
Sbjct: 3 FEALGLSPEILRALNDLGHASPTPIQKQSIPHVIDGRDLLGI 44
>UniRef50_A0KTC9 Cluster: DEAD/DEAH box helicase domain protein;
n=132; Bacteria|Rep: DEAD/DEAH box helicase domain
protein - Shewanella sp. (strain ANA-3)
Length = 578
Score = 64.1 bits (149), Expect = 3e-09
Identities = 29/61 (47%), Positives = 40/61 (65%)
Frame = +1
Query: 286 ALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLI 465
ALVL PTRELA Q+ + +G +R+ VFGG P Q + L GV++++ATPGRL+
Sbjct: 76 ALVLTPTRELAAQVSESVETYGKYLPLRSAVVFGGVPINPQIQKLRHGVDVLVATPGRLL 135
Query: 466 D 468
D
Sbjct: 136 D 136
Score = 48.8 bits (111), Expect = 1e-04
Identities = 23/39 (58%), Positives = 29/39 (74%)
Frame = +3
Query: 501 VHILVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSA 617
+ +LVLDEADRMLDMGF I+KI+ + RQ LM+SA
Sbjct: 148 LEVLVLDEADRMLDMGFIRDIKKILAMLPAKRQNLMFSA 186
Score = 34.3 bits (75), Expect = 2.8
Identities = 13/31 (41%), Positives = 21/31 (67%)
Frame = +3
Query: 93 VQQGVKTMGYKEPTPIQAQGWPIAMSGKNLV 185
+Q+ V GY P+PIQAQ P ++GK+++
Sbjct: 12 IQKAVTEQGYDTPSPIQAQAIPAVLTGKDVM 42
>UniRef50_Q0E3X4 Cluster: DEAD-box ATP-dependent RNA helicase 35A;
n=50; Eukaryota|Rep: DEAD-box ATP-dependent RNA helicase
35A - Oryza sativa subsp. japonica (Rice)
Length = 627
Score = 64.1 bits (149), Expect = 3e-09
Identities = 35/90 (38%), Positives = 48/90 (53%), Gaps = 6/90 (6%)
Frame = +1
Query: 259 PIRRGDGPIALVLAPTRELAQQ----IQQVAADFGHTSY--VRNTCVFGGAPKREQARDL 420
PI G+GP +++ P+RELA+Q I+Q Y +R GG R Q +
Sbjct: 252 PIVPGEGPFGMIICPSRELAKQTYDVIEQFLVPLKEAGYPEIRPLLCIGGVDMRAQLDVV 311
Query: 421 ERGVEIVIATPGRLIDFLEKGTTNLQRCTF 510
++GV IV+ATPGRL D L K NL C +
Sbjct: 312 KKGVHIVVATPGRLKDLLAKKKMNLDNCRY 341
Score = 50.4 bits (115), Expect = 4e-05
Identities = 23/54 (42%), Positives = 34/54 (62%)
Frame = +3
Query: 471 LGKGHNQLTAVHILVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSAYLAQK 632
L K L L LDEADR++D+GFE IR++ + + RQTL++SA + +K
Sbjct: 329 LAKKKMNLDNCRYLTLDEADRLVDLGFEDDIREVFDHFKAQRQTLLFSATMPKK 382
Score = 47.6 bits (108), Expect = 3e-04
Identities = 18/56 (32%), Positives = 35/56 (62%)
Frame = +3
Query: 24 VTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGV 191
+ V G +V P + F + P+ + + ++ G +PTPIQ QG P+ +SG++++G+
Sbjct: 170 ILVDGDDVPPPARDFRDLRLPEPMLRKLREKGIVQPTPIQVQGLPVVLSGRDMIGI 225
>UniRef50_Q8D7D0 Cluster: Superfamily II DNA and RNA helicase; n=20;
Gammaproteobacteria|Rep: Superfamily II DNA and RNA
helicase - Vibrio vulnificus
Length = 418
Score = 63.7 bits (148), Expect = 4e-09
Identities = 33/74 (44%), Positives = 45/74 (60%)
Frame = +1
Query: 280 PIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGR 459
P AL+LAPTRELAQQ+ + + + V+GG R Q L +GV+I+IATPGR
Sbjct: 78 PRALILAPTRELAQQVFDNLKQYAQHTELAIVTVYGGTSIRVQQEQLAKGVDILIATPGR 137
Query: 460 LIDFLEKGTTNLQR 501
L+D L T+L +
Sbjct: 138 LLDHLFTKKTSLNQ 151
Score = 53.6 bits (123), Expect = 4e-06
Identities = 24/42 (57%), Positives = 35/42 (83%)
Frame = +3
Query: 492 LTAVHILVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSA 617
L + +LVLDEADRMLDMGF P I++I++++ +RQTL++SA
Sbjct: 149 LNQLQMLVLDEADRMLDMGFLPDIQRIMKRMPEERQTLLFSA 190
>UniRef50_Q725W5 Cluster: ATP-dependent RNA helicase, DEAD/DEAH
family; n=2; Desulfovibrio vulgaris subsp. vulgaris|Rep:
ATP-dependent RNA helicase, DEAD/DEAH family -
Desulfovibrio vulgaris (strain Hildenborough / ATCC
29579 / NCIMB8303)
Length = 532
Score = 63.7 bits (148), Expect = 4e-09
Identities = 33/71 (46%), Positives = 43/71 (60%), Gaps = 1/71 (1%)
Frame = +1
Query: 286 ALVLAPTRELAQQIQQ-VAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRL 462
ALVL PTRELA Q+ + A H VR V+GG P QA L RG ++V+ TPGR+
Sbjct: 76 ALVLCPTRELALQVANGLTALAKHLRGVRILSVYGGQPIEPQASALRRGAQVVVGTPGRI 135
Query: 463 IDFLEKGTTNL 495
+D + +GT L
Sbjct: 136 LDHINRGTLQL 146
Score = 42.3 bits (95), Expect = 0.011
Identities = 21/49 (42%), Positives = 30/49 (61%)
Frame = +3
Query: 471 LGKGHNQLTAVHILVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSA 617
+ +G QL V + VLDEAD MLDMGF I +I+ ++ Q+ +SA
Sbjct: 139 INRGTLQLGVVRMTVLDEADEMLDMGFREDIERILSEMPEWVQSAFFSA 187
>UniRef50_Q67NW1 Cluster: ATP-dependent RNA helicase; n=5;
Firmicutes|Rep: ATP-dependent RNA helicase -
Symbiobacterium thermophilum
Length = 526
Score = 63.7 bits (148), Expect = 4e-09
Identities = 30/72 (41%), Positives = 43/72 (59%)
Frame = +1
Query: 286 ALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLI 465
ALVL PTRELA Q+ + G + V+ ++GG Q R L GV++VI TPGR++
Sbjct: 77 ALVLTPTRELAIQVAEEITKIGRHARVKTIAIYGGQSIERQIRSLRFGVDVVIGTPGRIL 136
Query: 466 DFLEKGTTNLQR 501
D L + T +L +
Sbjct: 137 DHLGRSTLDLSQ 148
Score = 52.0 bits (119), Expect = 1e-05
Identities = 25/49 (51%), Positives = 34/49 (69%)
Frame = +3
Query: 471 LGKGHNQLTAVHILVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSA 617
LG+ L+ V ++VLDEAD MLDMGF I KI++ +RQTL++SA
Sbjct: 139 LGRSTLDLSQVRMVVLDEADEMLDMGFIEDIEKILQNTPAERQTLLFSA 187
Score = 38.3 bits (85), Expect = 0.17
Identities = 15/41 (36%), Positives = 26/41 (63%)
Frame = +3
Query: 66 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVG 188
F + + V + + MG++EP+PIQAQ P + GK+++G
Sbjct: 8 FRDLALSEKVLKALDDMGFEEPSPIQAQAIPALLQGKDVIG 48
>UniRef50_Q08Q14 Cluster: HeliCase, c-terminal:dead/deah box
helicase, n-terminal; n=3; Bacteria|Rep: HeliCase,
c-terminal:dead/deah box helicase, n-terminal -
Stigmatella aurantiaca DW4/3-1
Length = 608
Score = 63.7 bits (148), Expect = 4e-09
Identities = 30/72 (41%), Positives = 46/72 (63%)
Frame = +1
Query: 286 ALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLI 465
ALVL PTRELA Q+ + +G + ++GG +Q R L+RGV++V+ATPGR +
Sbjct: 110 ALVLVPTRELAMQVAEAIHRYGQKLGISVVPLYGGQVISQQLRVLKRGVDVVVATPGRAL 169
Query: 466 DFLEKGTTNLQR 501
D L++ T L++
Sbjct: 170 DHLQRKTLKLEQ 181
Score = 44.0 bits (99), Expect = 0.003
Identities = 21/45 (46%), Positives = 28/45 (62%)
Frame = +3
Query: 489 QLTAVHILVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSAYL 623
+L V ++VLDEAD MLDMGF + I+ RQT ++SA L
Sbjct: 178 KLEQVRVVVLDEADEMLDMGFAEDLEAILSSTPEKRQTALFSATL 222
Score = 36.7 bits (81), Expect = 0.53
Identities = 15/42 (35%), Positives = 24/42 (57%)
Frame = +3
Query: 66 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGV 191
FE + + + +GY+EPTPIQ P + GK+L+G+
Sbjct: 38 FESLGLLPPLVEALSALGYEEPTPIQRAALPPLLEGKDLLGI 79
>UniRef50_A3ZWP8 Cluster: ATP-dependent RNA helicase; n=1;
Blastopirellula marina DSM 3645|Rep: ATP-dependent RNA
helicase - Blastopirellula marina DSM 3645
Length = 428
Score = 63.7 bits (148), Expect = 4e-09
Identities = 30/73 (41%), Positives = 41/73 (56%)
Frame = +1
Query: 280 PIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGR 459
P AL+L PTRELA Q++ A H + V+GG P R Q L+R IV+ TPGR
Sbjct: 75 PQALILTPTRELAVQVRDEIAKLTHGQRINVVAVYGGKPLRSQMEKLKRAPHIVVGTPGR 134
Query: 460 LIDFLEKGTTNLQ 498
+ID + + L+
Sbjct: 135 VIDLMTRRALQLE 147
Score = 51.6 bits (118), Expect = 2e-05
Identities = 24/43 (55%), Positives = 31/43 (72%)
Frame = +3
Query: 489 QLTAVHILVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSA 617
QL + +VLDEADRMLD+GF P I KI+ + +RQTL+ SA
Sbjct: 145 QLEMLRTVVLDEADRMLDIGFRPDIEKILRRCPEERQTLLLSA 187
>UniRef50_A0K1H7 Cluster: DEAD/DEAH box helicase domain protein;
n=12; Actinobacteria (class)|Rep: DEAD/DEAH box helicase
domain protein - Arthrobacter sp. (strain FB24)
Length = 635
Score = 63.7 bits (148), Expect = 4e-09
Identities = 33/91 (36%), Positives = 47/91 (51%)
Frame = +1
Query: 226 LASHCAHKQPPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKRE 405
L + A ++ R+ P+ LVLAPTRELA QI + T ++GG +
Sbjct: 60 LVARLAEREAKHFRKPGRPMGLVLAPTRELATQINATIEPMAKAMGLNTTVIYGGISQAR 119
Query: 406 QARDLERGVEIVIATPGRLIDFLEKGTTNLQ 498
Q + L GV+IVIA PGRL D + + L+
Sbjct: 120 QEKALRAGVDIVIACPGRLEDLIRQRILTLE 150
Score = 43.6 bits (98), Expect = 0.005
Identities = 20/44 (45%), Positives = 29/44 (65%)
Frame = +3
Query: 492 LTAVHILVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSAYL 623
L AV + VLDEAD M D+GF P ++K+++ Q L++SA L
Sbjct: 149 LEAVEVTVLDEADHMADLGFLPVVKKLMDMTPSQGQRLLFSATL 192
>UniRef50_Q8L7S8 Cluster: DEAD-box ATP-dependent RNA helicase 3;
n=13; Magnoliophyta|Rep: DEAD-box ATP-dependent RNA
helicase 3 - Arabidopsis thaliana (Mouse-ear cress)
Length = 748
Score = 63.7 bits (148), Expect = 4e-09
Identities = 32/71 (45%), Positives = 44/71 (61%)
Frame = +1
Query: 265 RRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVI 444
R G P LVLAPTRELA+Q+++ + Y+ CV+GG Q L RGV++V+
Sbjct: 176 RSGRLPKFLVLAPTRELAKQVEKEIKE--SAPYLSTVCVYGGVSYTIQQSALTRGVDVVV 233
Query: 445 ATPGRLIDFLE 477
TPGR+ID +E
Sbjct: 234 GTPGRIIDLIE 244
Score = 43.6 bits (98), Expect = 0.005
Identities = 20/43 (46%), Positives = 30/43 (69%)
Frame = +3
Query: 489 QLTAVHILVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSA 617
+L V LVLDEAD+ML +GFE + I+E + RQ++++SA
Sbjct: 249 KLGEVEYLVLDEADQMLAVGFEEAVESILENLPTKRQSMLFSA 291
>UniRef50_Q6CCZ1 Cluster: Pre-mRNA-processing ATP-dependent RNA
helicase PRP5; n=1; Yarrowia lipolytica|Rep:
Pre-mRNA-processing ATP-dependent RNA helicase PRP5 -
Yarrowia lipolytica (Candida lipolytica)
Length = 974
Score = 63.7 bits (148), Expect = 4e-09
Identities = 28/47 (59%), Positives = 37/47 (78%)
Frame = +3
Query: 492 LTAVHILVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSAYLAQK 632
L+ V LV+DEADRM DMGFEPQ+ K+ + IRPDRQT+++SA +K
Sbjct: 534 LSRVTFLVIDEADRMFDMGFEPQVLKLTQSIRPDRQTVLFSATFPKK 580
Score = 58.0 bits (134), Expect = 2e-07
Identities = 28/80 (35%), Positives = 45/80 (56%), Gaps = 3/80 (3%)
Frame = +1
Query: 280 PIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGR 459
P+ +++ PTREL QI + F + C +GG+P ++Q L++G I++ TPGR
Sbjct: 460 PLGVIITPTRELCVQIYRDLRPFLAALELTAVCAYGGSPIKDQIAALKKGTHIIVCTPGR 519
Query: 460 LIDFL---EKGTTNLQRCTF 510
+ID L + +L R TF
Sbjct: 520 MIDLLAANQGRVLSLSRVTF 539
Score = 37.9 bits (84), Expect = 0.23
Identities = 17/58 (29%), Positives = 29/58 (50%)
Frame = +3
Query: 24 VTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVLK 197
+ + G + PI + + P + + Y +PT IQAQ P MSG++++ V K
Sbjct: 366 IKIRGKDCPKPISKWTQLGLPGPTMGVLNDLRYDKPTSIQAQAIPAVMSGRDVISVAK 423
>UniRef50_A5DU73 Cluster: Pre-mRNA-splicing ATP-dependent RNA
helicase PRP28; n=3; Saccharomycetales|Rep:
Pre-mRNA-splicing ATP-dependent RNA helicase PRP28 -
Lodderomyces elongisporus (Yeast) (Saccharomyces
elongisporus)
Length = 597
Score = 63.7 bits (148), Expect = 4e-09
Identities = 35/82 (42%), Positives = 46/82 (56%), Gaps = 5/82 (6%)
Frame = +1
Query: 280 PIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLE-----RGVEIVI 444
P+ALVLAPTRELA QI Q A FG + GG +E ++ RGV IV+
Sbjct: 264 PLALVLAPTRELALQITQEAEKFGKQLGFNVLSIIGGRQYQETMDQIDNMIVGRGVHIVV 323
Query: 445 ATPGRLIDFLEKGTTNLQRCTF 510
TPGRL+D +E+ N +C +
Sbjct: 324 GTPGRLLDSVERKILNFSKCYY 345
Score = 39.5 bits (88), Expect = 0.075
Identities = 14/59 (23%), Positives = 36/59 (61%)
Frame = +3
Query: 15 NHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGV 191
++ +T G ++ + + ++E+ + +K+ G+++PTP+Q PI++ +++VGV
Sbjct: 170 DYGITTKGKKIPHATRSWDESGLDPKILASLKSFGFRQPTPVQRASIPISLELRDVVGV 228
Score = 37.9 bits (84), Expect = 0.23
Identities = 15/24 (62%), Positives = 20/24 (83%)
Frame = +3
Query: 504 HILVLDEADRMLDMGFEPQIRKII 575
+ LV+DEADRM+DMGFE + K+I
Sbjct: 344 YYLVMDEADRMIDMGFEKDLNKLI 367
>UniRef50_Q8F0Q7 Cluster: ATP-dependent RNA helicase; n=4;
Leptospira|Rep: ATP-dependent RNA helicase - Leptospira
interrogans
Length = 540
Score = 63.3 bits (147), Expect = 5e-09
Identities = 33/79 (41%), Positives = 47/79 (59%), Gaps = 1/79 (1%)
Frame = +1
Query: 277 GPIALVLAPTRELAQQIQQVAADF-GHTSYVRNTCVFGGAPKREQARDLERGVEIVIATP 453
G ALVLAPTREL QI + A H+ +R+ + GG + Q +DLE I++ATP
Sbjct: 70 GIAALVLAPTRELTMQIAEEAKKLLKHSEGIRSVPIIGGTDYKSQNKDLEGLNGIIVATP 129
Query: 454 GRLIDFLEKGTTNLQRCTF 510
GRLID ++ G+ ++ F
Sbjct: 130 GRLIDMIKSGSIDISNVEF 148
Score = 48.0 bits (109), Expect = 2e-04
Identities = 24/54 (44%), Positives = 35/54 (64%)
Frame = +3
Query: 480 GHNQLTAVHILVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSAYLAQKKXR 641
G ++ V VLDEADRMLDMGF IR ++ + + +QTL++SA L+ + R
Sbjct: 139 GSIDISNVEFFVLDEADRMLDMGFIQDIRWLLHKCKNRKQTLLYSATLSVEVMR 192
Score = 33.5 bits (73), Expect = 4.9
Identities = 14/42 (33%), Positives = 24/42 (57%)
Frame = +3
Query: 66 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGV 191
FEE + + ++ +GY E TPIQ + P + GK++ G+
Sbjct: 3 FEELSIHPKLLSAIQEIGYTELTPIQEKSIPHGLEGKDITGL 44
>UniRef50_O07897 Cluster: Heat resistant RNA dependent ATPase; n=3;
Thermus thermophilus|Rep: Heat resistant RNA dependent
ATPase - Thermus thermophilus
Length = 510
Score = 63.3 bits (147), Expect = 5e-09
Identities = 39/95 (41%), Positives = 51/95 (53%), Gaps = 1/95 (1%)
Frame = +1
Query: 220 LHLASHCAHKQPPPIRRGDGPIALVLAPTRELAQQI-QQVAADFGHTSYVRNTCVFGGAP 396
L A A + P RG P ALVL PTRELA Q+ ++ A H V V+GG
Sbjct: 53 LAFALPIAERLAPSQERGRKPRALVLTPTRELALQVASELTAVAPHLKVV---AVYGGTG 109
Query: 397 KREQARDLERGVEIVIATPGRLIDFLEKGTTNLQR 501
+Q L RG + V+ATPGR +D+L +G +L R
Sbjct: 110 YGKQKEALLRGADAVVATPGRALDYLRQGVLDLSR 144
Score = 51.6 bits (118), Expect = 2e-05
Identities = 24/52 (46%), Positives = 34/52 (65%)
Frame = +3
Query: 468 FLGKGHNQLTAVHILVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSAYL 623
+L +G L+ V + VLDEAD ML MGFE ++ ++ P RQTL++SA L
Sbjct: 134 YLRQGVLDLSRVEVAVLDEADEMLSMGFEEEVEALLSATPPSRQTLLFSATL 185
Score = 33.5 bits (73), Expect = 4.9
Identities = 14/41 (34%), Positives = 23/41 (56%)
Frame = +3
Query: 66 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVG 188
F++ + + + G PTPIQA P+A+ GK+L+G
Sbjct: 3 FKDFPLKPEILEALHGRGLTTPTPIQAAALPLALEGKDLIG 43
>UniRef50_A5FST0 Cluster: DEAD/DEAH box helicase domain protein;
n=8; Bacteria|Rep: DEAD/DEAH box helicase domain protein
- Dehalococcoides sp. BAV1
Length = 561
Score = 63.3 bits (147), Expect = 5e-09
Identities = 29/69 (42%), Positives = 43/69 (62%)
Frame = +1
Query: 289 LVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLID 468
LV+APTRELA QI G + +R ++GG +Q R L GV++V+A PGRL+D
Sbjct: 74 LVIAPTRELACQISDSFRSLGQRARIRECSIYGGVNMDQQIRRLRSGVDVVVACPGRLLD 133
Query: 469 FLEKGTTNL 495
+ +GT ++
Sbjct: 134 HIWRGTIDV 142
Score = 50.0 bits (114), Expect = 5e-05
Identities = 22/42 (52%), Positives = 28/42 (66%)
Frame = +3
Query: 66 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGV 191
FE NF V GV+ GYKEPTPIQAQ P M+G +++G+
Sbjct: 3 FESFNFDPAVMAGVRACGYKEPTPIQAQAIPPIMAGHDVIGL 44
Score = 48.0 bits (109), Expect = 2e-04
Identities = 21/47 (44%), Positives = 32/47 (68%)
Frame = +3
Query: 477 KGHNQLTAVHILVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSA 617
+G + V L++DEADRM DMGF+P I+ I++ + QTL++SA
Sbjct: 137 RGTIDVCGVETLIIDEADRMFDMGFQPDIQSILKCLVQPHQTLLFSA 183
>UniRef50_A3TJG3 Cluster: ATP-dependent RNA helicase; n=5;
Actinomycetales|Rep: ATP-dependent RNA helicase -
Janibacter sp. HTCC2649
Length = 514
Score = 63.3 bits (147), Expect = 5e-09
Identities = 31/73 (42%), Positives = 43/73 (58%)
Frame = +1
Query: 265 RRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVI 444
R+ P AL+LAPTRELA QI + A + + VFGG + Q + RGV++V+
Sbjct: 87 RQAKRPRALILAPTRELAIQIDEALAPLAQPLGITSKTVFGGVGQGPQVNAITRGVDVVV 146
Query: 445 ATPGRLIDFLEKG 483
A PGRL D + +G
Sbjct: 147 ACPGRLEDLMNQG 159
Score = 47.6 bits (108), Expect = 3e-04
Identities = 21/51 (41%), Positives = 35/51 (68%)
Frame = +3
Query: 471 LGKGHNQLTAVHILVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSAYL 623
+ +GH L AV I +LDEAD M D+GF P +++I+++ + Q +++SA L
Sbjct: 156 MNQGHVILDAVEITILDEADHMADLGFLPVVKRILDKTPRNGQRMLFSATL 206
>UniRef50_Q019E9 Cluster: ATP-dependent RNA helicase; n=2;
Ostreococcus|Rep: ATP-dependent RNA helicase -
Ostreococcus tauri
Length = 683
Score = 63.3 bits (147), Expect = 5e-09
Identities = 31/77 (40%), Positives = 45/77 (58%)
Frame = +1
Query: 280 PIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGR 459
P +VLAPTRELA+Q++ F + CV+GG P +Q L RGV+IV+ TPGR
Sbjct: 102 PKCIVLAPTRELAKQVENEI--FITAPTLDTACVYGGTPIGQQESKLRRGVDIVVGTPGR 159
Query: 460 LIDFLEKGTTNLQRCTF 510
++D + + +L F
Sbjct: 160 IMDLMNRRALDLSEIEF 176
Score = 43.6 bits (98), Expect = 0.005
Identities = 19/46 (41%), Positives = 30/46 (65%)
Frame = +3
Query: 492 LTAVHILVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSAYLAQ 629
L+ + +VLDEAD+ML++GFE + I+ RQT ++SA + Q
Sbjct: 171 LSEIEFVVLDEADQMLNVGFEEDVEAILHDCPAGRQTFLFSATMPQ 216
>UniRef50_Q7QTB0 Cluster: GLP_15_15676_17025; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_15_15676_17025 - Giardia lamblia
ATCC 50803
Length = 449
Score = 63.3 bits (147), Expect = 5e-09
Identities = 33/73 (45%), Positives = 47/73 (64%)
Frame = +1
Query: 280 PIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGR 459
P+A++L+PTREL QQI + + + V+GG REQ L++G +IVIATPGR
Sbjct: 48 PLAVILSPTRELTQQIAFMCYQLTFKTNLIVRLVYGGEGAREQRGLLKKGCDIVIATPGR 107
Query: 460 LIDFLEKGTTNLQ 498
L DFLE+ +L+
Sbjct: 108 LKDFLERRCLSLK 120
Score = 49.6 bits (113), Expect = 7e-05
Identities = 28/57 (49%), Positives = 37/57 (64%), Gaps = 7/57 (12%)
Frame = +3
Query: 468 FLGKGHNQLTAVHILVLDEADRMLDMGFEPQIRKIIEQI-------RPDRQTLMWSA 617
FL + L V ++VLDEAD+MLDMGFEPQIR ++ + +RQTLM+SA
Sbjct: 111 FLERRCLSLKYVRVMVLDEADKMLDMGFEPQIRDLVYKFDMPGNGPNGNRQTLMFSA 167
>UniRef50_P09052 Cluster: ATP-dependent RNA helicase vasa; n=5;
Eukaryota|Rep: ATP-dependent RNA helicase vasa -
Drosophila melanogaster (Fruit fly)
Length = 661
Score = 63.3 bits (147), Expect = 5e-09
Identities = 30/67 (44%), Positives = 43/67 (64%)
Frame = +1
Query: 280 PIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGR 459
P ++++PTRELA QI A F SY++ V+GG R Q + RG +VIATPGR
Sbjct: 319 PQVVIVSPTRELAIQIFNEARKFAFESYLKIGIVYGGTSFRHQNECITRGCHVVIATPGR 378
Query: 460 LIDFLEK 480
L+DF+++
Sbjct: 379 LLDFVDR 385
Score = 52.0 bits (119), Expect = 1e-05
Identities = 25/58 (43%), Positives = 34/58 (58%)
Frame = +3
Query: 12 NNHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLV 185
NN V V+G +V PIQ+F A+ D + V GYK PTPIQ P+ SG++L+
Sbjct: 229 NNIPVKVTGSDVPQPIQHFTSADLRDIIIDNVNKSGYKIPTPIQKCSIPVISSGRDLM 286
Score = 48.8 bits (111), Expect = 1e-04
Identities = 24/46 (52%), Positives = 33/46 (71%), Gaps = 2/46 (4%)
Frame = +3
Query: 510 LVLDEADRMLDMGFEPQIRKIIEQI--RPDRQTLMWSAYLAQKKXR 641
+VLDEADRMLDMGF +R+I+ + RP+ QTLM+SA ++ R
Sbjct: 396 VVLDEADRMLDMGFSEDMRRIMTHVTMRPEHQTLMFSATFPEEIQR 441
>UniRef50_Q7S5R1 Cluster: ATP-dependent RNA helicase dbp-3; n=10;
Pezizomycotina|Rep: ATP-dependent RNA helicase dbp-3 -
Neurospora crassa
Length = 614
Score = 63.3 bits (147), Expect = 5e-09
Identities = 32/79 (40%), Positives = 46/79 (58%), Gaps = 2/79 (2%)
Frame = +1
Query: 280 PIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDL--ERGVEIVIATP 453
P A++++PTRELA Q + + C+FGG+ K EQ L GV+I+ ATP
Sbjct: 258 PRAVIVSPTRELAMQTHAALSGLASLVGLSAVCIFGGSDKNEQRNLLYKNNGVDIITATP 317
Query: 454 GRLIDFLEKGTTNLQRCTF 510
GRL DFL +G+ +L +F
Sbjct: 318 GRLKDFLSEGSISLANVSF 336
Score = 46.4 bits (105), Expect = 7e-04
Identities = 26/52 (50%), Positives = 31/52 (59%), Gaps = 2/52 (3%)
Frame = +3
Query: 468 FLGKGHNQLTAVHILVLDEADRMLDMGFEPQIRKIIEQIRP--DRQTLMWSA 617
FL +G L V VLDEADRMLD GF I+ I+ P RQTLM++A
Sbjct: 323 FLSEGSISLANVSFAVLDEADRMLDRGFSEDIKLILSGCPPKEQRQTLMFTA 374
Score = 36.7 bits (81), Expect = 0.53
Identities = 11/24 (45%), Positives = 19/24 (79%)
Frame = +3
Query: 120 YKEPTPIQAQGWPIAMSGKNLVGV 191
Y PTPIQ+ WP ++SG++++G+
Sbjct: 199 YTNPTPIQSASWPFSLSGRDVIGI 222
>UniRef50_UPI00015B4D1B Cluster: PREDICTED: similar to DEAD box
ATP-dependent RNA helicase; n=1; Nasonia
vitripennis|Rep: PREDICTED: similar to DEAD box
ATP-dependent RNA helicase - Nasonia vitripennis
Length = 594
Score = 62.9 bits (146), Expect = 7e-09
Identities = 32/90 (35%), Positives = 46/90 (51%), Gaps = 6/90 (6%)
Frame = +1
Query: 259 PIRRGDGPIALVLAPTRELAQQIQQVAADFG------HTSYVRNTCVFGGAPKREQARDL 420
P R +GP L++ P+RELA+Q + + H +R GG P E +
Sbjct: 249 PFGRNEGPYGLIICPSRELAKQTYDIIQHYTNSLRHHHCPEIRCCLAIGGVPVSESLDVI 308
Query: 421 ERGVEIVIATPGRLIDFLEKGTTNLQRCTF 510
RGV I++ATPGRL+D L+K L C +
Sbjct: 309 SRGVHIMVATPGRLMDMLDKKMVKLGVCRY 338
Score = 51.6 bits (118), Expect = 2e-05
Identities = 21/56 (37%), Positives = 36/56 (64%)
Frame = +3
Query: 24 VTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGV 191
+TV G +V P++ F+E F + G++ G +PTPIQ QG P +SG++++G+
Sbjct: 167 ITVEGEDVPPPLRSFKEMKFHKGILLGLEQKGITKPTPIQVQGIPAVLSGRDIIGI 222
Score = 47.6 bits (108), Expect = 3e-04
Identities = 24/54 (44%), Positives = 32/54 (59%)
Frame = +3
Query: 471 LGKGHNQLTAVHILVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSAYLAQK 632
L K +L L +DEADRM+DMGFE +R I RQTL++SA + +K
Sbjct: 326 LDKKMVKLGVCRYLCMDEADRMIDMGFEEDVRTIFSFFEGQRQTLLFSATMPKK 379
>UniRef50_Q3AFI3 Cluster: ATP-dependent RNA helicase, DEAD box
family; n=1; Carboxydothermus hydrogenoformans
Z-2901|Rep: ATP-dependent RNA helicase, DEAD box family
- Carboxydothermus hydrogenoformans (strain Z-2901 / DSM
6008)
Length = 430
Score = 62.9 bits (146), Expect = 7e-09
Identities = 30/75 (40%), Positives = 43/75 (57%)
Frame = +1
Query: 262 IRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIV 441
I+RG L++ PTRELA Q+ A G VR V+GG Q R L +GVE++
Sbjct: 64 IQRGKKAQVLIVTPTRELALQVADEVAKLGKYLKVRALAVYGGQAIERQIRGLRQGVEVI 123
Query: 442 IATPGRLIDFLEKGT 486
+ TPGR++D + + T
Sbjct: 124 VGTPGRILDHIGRKT 138
Score = 42.7 bits (96), Expect = 0.008
Identities = 20/41 (48%), Positives = 28/41 (68%)
Frame = +3
Query: 501 VHILVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSAYL 623
+ I++LDEAD MLDMGF I I+ + +QTL++SA L
Sbjct: 144 IKIVILDEADEMLDMGFIDDIEAILNTLTNRQQTLLFSATL 184
Score = 34.3 bits (75), Expect = 2.8
Identities = 13/30 (43%), Positives = 20/30 (66%)
Frame = +3
Query: 99 QGVKTMGYKEPTPIQAQGWPIAMSGKNLVG 188
+ V +G++ PTPIQ + P+ + G NLVG
Sbjct: 15 KAVNDLGFEMPTPIQKEAIPLILEGHNLVG 44
>UniRef50_A1USG3 Cluster: DEAD/DEAH box helicase domain/helicase
conserved C-terminal domain protein; n=2;
Rhizobiales|Rep: DEAD/DEAH box helicase domain/helicase
conserved C-terminal domain protein - Bartonella
bacilliformis (strain ATCC 35685 / KC583)
Length = 462
Score = 62.9 bits (146), Expect = 7e-09
Identities = 30/69 (43%), Positives = 42/69 (60%)
Frame = +1
Query: 280 PIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGR 459
P L+L PTRELA Q+++ +G + + GG Q R LERG +++IATPGR
Sbjct: 78 PRTLILEPTRELAAQVKENFDKYGINHRLNVALLIGGVSFDHQDRKLERGADVLIATPGR 137
Query: 460 LIDFLEKGT 486
L+D E+GT
Sbjct: 138 LLDHFERGT 146
Score = 50.8 bits (116), Expect = 3e-05
Identities = 27/50 (54%), Positives = 33/50 (66%)
Frame = +3
Query: 477 KGHNQLTAVHILVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSAYLA 626
+G L V ILV+DEADRMLDMGF P I +I + RQTL +SA +A
Sbjct: 144 RGTLLLMGVEILVIDEADRMLDMGFIPDIERICKLTPFTRQTLFFSATMA 193
Score = 33.1 bits (72), Expect = 6.5
Identities = 14/46 (30%), Positives = 25/46 (54%)
Frame = +3
Query: 54 PIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGV 191
P+ F+ V + V+ GY PTPIQ++ P + K+++G+
Sbjct: 4 PLNNFDNLGLSAKVIKAVQLAGYTAPTPIQSETIPHVLQHKDVLGI 49
>UniRef50_A0LLL9 Cluster: DEAD/DEAH box helicase domain protein;
n=2; Deltaproteobacteria|Rep: DEAD/DEAH box helicase
domain protein - Syntrophobacter fumaroxidans (strain
DSM 10017 / MPOB)
Length = 533
Score = 62.9 bits (146), Expect = 7e-09
Identities = 35/83 (42%), Positives = 49/83 (59%), Gaps = 1/83 (1%)
Frame = +1
Query: 256 PPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLE-RGV 432
P RR P ALVLAPTRELA QI++ + ++ +FGG +Q R L +
Sbjct: 184 PEGRRKGTPRALVLAPTRELALQIEKETHLLSRHTPFKSVAIFGGMDYEKQKRRLTGEVI 243
Query: 433 EIVIATPGRLIDFLEKGTTNLQR 501
+IV+ATPGRL+DF +G +L +
Sbjct: 244 DIVVATPGRLLDFKRQGDLHLSK 266
Score = 54.4 bits (125), Expect = 2e-06
Identities = 29/60 (48%), Positives = 39/60 (65%), Gaps = 2/60 (3%)
Frame = +3
Query: 468 FLGKGHNQLTAVHILVLDEADRMLDMGFEPQIRKIIEQIRP--DRQTLMWSAYLAQKKXR 641
F +G L+ V ILV+DEADRMLDMGF P +++II P RQT+++SA L + R
Sbjct: 256 FKRQGDLHLSKVEILVIDEADRMLDMGFIPDVQRIIHYTPPKAQRQTMLFSATLTAEVTR 315
>UniRef50_A7PDS5 Cluster: Chromosome chr11 scaffold_13, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr11 scaffold_13, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 563
Score = 62.9 bits (146), Expect = 7e-09
Identities = 32/85 (37%), Positives = 48/85 (56%), Gaps = 1/85 (1%)
Frame = +1
Query: 244 HKQPPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHT-SYVRNTCVFGGAPKREQARDL 420
HK P I R G ALVL PTREL Q+ ++ H ++ V GG + ++ L
Sbjct: 94 HKYDPRIERSAGTFALVLVPTRELCMQVYEILQKLLHRFHWIVPGYVMGGENRSKEKARL 153
Query: 421 ERGVEIVIATPGRLIDFLEKGTTNL 495
+G+ I++ATPGRL+D L+ ++ L
Sbjct: 154 RKGISILVATPGRLLDHLKNTSSFL 178
Score = 34.3 bits (75), Expect = 2.8
Identities = 18/49 (36%), Positives = 31/49 (63%), Gaps = 3/49 (6%)
Frame = +3
Query: 495 TAVHILVLDEADRMLDMGFEPQIRKIIEQI---RPDRQTLMWSAYLAQK 632
T + ++ DEADR+L++GF +I +I++ + RQ L+ SA L +K
Sbjct: 180 TNLRWIIFDEADRILELGFGKEIEEILDLLVTSEFQRQNLLLSATLNEK 228
>UniRef50_Q3ZDP1 Cluster: Vasa-like protein; n=7; Neoptera|Rep:
Vasa-like protein - Anopheles gambiae (African malaria
mosquito)
Length = 596
Score = 62.9 bits (146), Expect = 7e-09
Identities = 30/97 (30%), Positives = 50/97 (51%)
Frame = +1
Query: 220 LHLASHCAHKQPPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPK 399
L + H K+ R P +++APTRELA QI F H + ++ +GG
Sbjct: 230 LPMIHHLLDKEDSLELRTRNPYIVIVAPTRELAIQIHDEGRKFAHGTKLKVCVSYGGTAV 289
Query: 400 REQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTF 510
+ Q + + G +++ATPGRL+DF+++G + F
Sbjct: 290 QHQLQLMRGGCHVLVATPGRLLDFIDRGYVTFENVNF 326
Score = 49.6 bits (113), Expect = 7e-05
Identities = 26/54 (48%), Positives = 35/54 (64%), Gaps = 4/54 (7%)
Frame = +3
Query: 468 FLGKGHNQLTAVHILVLDEADRMLDMGFEPQIRKIIEQI----RPDRQTLMWSA 617
F+ +G+ V+ +VLDEADRMLDMGF P I K++ + RQTLM+SA
Sbjct: 313 FIDRGYVTFENVNFVVLDEADRMLDMGFLPSIEKVMGHATMPEKQQRQTLMFSA 366
Score = 39.9 bits (89), Expect = 0.056
Identities = 18/55 (32%), Positives = 31/55 (56%)
Frame = +3
Query: 21 EVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLV 185
+V VSG + ++ FE + + V V+ Y +PTPIQ PI ++G++L+
Sbjct: 161 QVRVSGENPPDHVESFERSGLREEVMTNVRKSSYTKPTPIQRYAIPIILNGRDLM 215
>UniRef50_A0EA02 Cluster: Chromosome undetermined scaffold_85, whole
genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_85,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 957
Score = 62.9 bits (146), Expect = 7e-09
Identities = 28/49 (57%), Positives = 37/49 (75%)
Frame = +3
Query: 471 LGKGHNQLTAVHILVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSA 617
+ +G L + +L+LDEADRMLDMGFEPQ+R I+ IR DRQT++ SA
Sbjct: 214 IDEGMVNLNKITMLILDEADRMLDMGFEPQVRDIVSTIREDRQTILLSA 262
Score = 54.0 bits (124), Expect = 3e-06
Identities = 32/104 (30%), Positives = 55/104 (52%), Gaps = 17/104 (16%)
Frame = +1
Query: 247 KQPPPIRRGDGPIALVLAPTRELAQQI-----QQVAADFGHTSY-----------VRNTC 378
+Q I P L+L PTREL QI Q + +G+ ++ C
Sbjct: 122 EQHAMIMESPQPKLLILVPTRELGVQIYDQLLQLIEFYYGNKKQNEKENSPNLTNLKIVC 181
Query: 379 VFGGAP-KREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCT 507
++GG P K++Q +++G+ +++ATPGRLI+ +++G NL + T
Sbjct: 182 IYGGNPNKKQQVELIQKGIHVIVATPGRLIELIDEGMVNLNKIT 225
Score = 42.3 bits (95), Expect = 0.011
Identities = 17/26 (65%), Positives = 21/26 (80%)
Frame = +2
Query: 194 QTGSGKTLAYILPAIVHINNHRLFGE 271
QTGSGKTLAY+LPA+VH+ H + E
Sbjct: 104 QTGSGKTLAYLLPALVHLEQHAMIME 129
>UniRef50_Q9NR30 Cluster: Nucleolar RNA helicase 2; n=51;
Euteleostomi|Rep: Nucleolar RNA helicase 2 - Homo
sapiens (Human)
Length = 783
Score = 62.9 bits (146), Expect = 7e-09
Identities = 30/79 (37%), Positives = 46/79 (58%)
Frame = +1
Query: 265 RRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVI 444
+RG P LVLAPTRELA Q+ + +D T + C +GG P Q + G++I++
Sbjct: 256 KRGRAPQVLVLAPTRELANQVSKDFSDI--TKKLSVACFYGGTPYGGQFERMRNGIDILV 313
Query: 445 ATPGRLIDFLEKGTTNLQR 501
TPGR+ D ++ G +L +
Sbjct: 314 GTPGRIKDHIQNGKLDLTK 332
Score = 37.1 bits (82), Expect = 0.40
Identities = 21/51 (41%), Positives = 31/51 (60%), Gaps = 5/51 (9%)
Frame = +3
Query: 480 GHNQLTAVHILVLDEADRMLDMGFEPQIRKII-----EQIRPDRQTLMWSA 617
G LT + +VLDE D+MLDMGF Q+ +I+ + + QTL++SA
Sbjct: 326 GKLDLTKLKHVVLDEVDQMLDMGFADQVEEILSVAYKKDSEDNPQTLLFSA 376
>UniRef50_Q4SWK6 Cluster: Chromosome 12 SCAF13614, whole genome
shotgun sequence; n=1; Tetraodon nigroviridis|Rep:
Chromosome 12 SCAF13614, whole genome shotgun sequence -
Tetraodon nigroviridis (Green puffer)
Length = 1027
Score = 62.5 bits (145), Expect = 9e-09
Identities = 31/77 (40%), Positives = 49/77 (63%), Gaps = 4/77 (5%)
Frame = +1
Query: 256 PPIRRGDGPIALVLAPTRELAQQ----IQQVAADFGHTSYVRNTCVFGGAPKREQARDLE 423
P + RGDGP+AL+L PTRELAQQ Q++ F ++V + GG ++ + L
Sbjct: 147 PKVSRGDGPLALILVPTRELAQQTFVTFQKLLKPF---TWVVPGVLMGGEKRKAEKARLR 203
Query: 424 RGVEIVIATPGRLIDFL 474
+G+ I+++TPGRL+D +
Sbjct: 204 KGINILVSTPGRLVDHI 220
Score = 35.9 bits (79), Expect = 0.92
Identities = 16/30 (53%), Positives = 21/30 (70%)
Frame = +3
Query: 495 TAVHILVLDEADRMLDMGFEPQIRKIIEQI 584
+AV LVLDEADR LD+GFE + I+ +
Sbjct: 229 SAVRWLVLDEADRTLDLGFEKDLSVILNSV 258
>UniRef50_Q9RKJ0 Cluster: ATP-dependent RNA helicase; n=2;
Streptomyces|Rep: ATP-dependent RNA helicase -
Streptomyces coelicolor
Length = 740
Score = 62.5 bits (145), Expect = 9e-09
Identities = 29/73 (39%), Positives = 43/73 (58%)
Frame = +1
Query: 280 PIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGR 459
P A++L PTRELA Q+ +G ++ V GG Q LERGV++++ATPGR
Sbjct: 133 PRAVILTPTRELAMQVADALQPYGDVLGLKMKVVCGGTSMGNQIYALERGVDVLVATPGR 192
Query: 460 LIDFLEKGTTNLQ 498
L D + +G +L+
Sbjct: 193 LRDIINRGACSLE 205
Score = 44.4 bits (100), Expect = 0.003
Identities = 19/49 (38%), Positives = 33/49 (67%)
Frame = +3
Query: 471 LGKGHNQLTAVHILVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSA 617
+ +G L V I VLDEAD+M D+GF P++ ++++Q+ Q +++SA
Sbjct: 197 INRGACSLENVQIAVLDEADQMSDLGFLPEVTELLDQVPAGGQRMLFSA 245
>UniRef50_Q6AMK6 Cluster: Probable ATP-dependent RNA helicase; n=1;
Desulfotalea psychrophila|Rep: Probable ATP-dependent
RNA helicase - Desulfotalea psychrophila
Length = 632
Score = 62.5 bits (145), Expect = 9e-09
Identities = 30/72 (41%), Positives = 42/72 (58%)
Frame = +1
Query: 286 ALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLI 465
ALVLAPTRELAQQ+ A + V+GG+ + Q L RG +V+ TPGRL+
Sbjct: 126 ALVLAPTRELAQQVGDALATYSGDDGRNVLVVYGGSSYQAQVGGLRRGARVVVGTPGRLL 185
Query: 466 DFLEKGTTNLQR 501
D + +G+ L +
Sbjct: 186 DLIRQGSLKLDQ 197
Score = 48.0 bits (109), Expect = 2e-04
Identities = 24/52 (46%), Positives = 33/52 (63%)
Frame = +3
Query: 477 KGHNQLTAVHILVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSAYLAQK 632
+G +L + LVLDEAD ML MGF I I+ Q DRQT+++SA L+ +
Sbjct: 190 QGSLKLDQLKTLVLDEADEMLSMGFIDDIETILSQTPKDRQTMLFSATLSSR 241
Score = 33.9 bits (74), Expect = 3.7
Identities = 13/45 (28%), Positives = 25/45 (55%)
Frame = +3
Query: 54 PIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVG 188
P F + N + + +G+ +PTPIQ + P+ ++G +L+G
Sbjct: 53 PAVSFTDFNLKSDLVANLVKLGFSQPTPIQEKAIPLLLAGSDLIG 97
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 728,685,814
Number of Sequences: 1657284
Number of extensions: 15655307
Number of successful extensions: 44170
Number of sequences better than 10.0: 500
Number of HSP's better than 10.0 without gapping: 39852
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 43704
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 53305790091
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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