Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060966.seq
(685 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_18993| Best HMM Match : DEAD (HMM E-Value=9.3e-41) 119 3e-27
SB_16431| Best HMM Match : No HMM Matches (HMM E-Value=.) 91 6e-19
SB_25090| Best HMM Match : No HMM Matches (HMM E-Value=.) 78 8e-15
SB_3952| Best HMM Match : No HMM Matches (HMM E-Value=.) 77 1e-14
SB_56998| Best HMM Match : No HMM Matches (HMM E-Value=.) 70 2e-12
SB_37351| Best HMM Match : DEAD (HMM E-Value=0) 66 2e-11
SB_19958| Best HMM Match : No HMM Matches (HMM E-Value=.) 61 7e-10
SB_30826| Best HMM Match : No HMM Matches (HMM E-Value=.) 58 9e-09
SB_52320| Best HMM Match : DEAD (HMM E-Value=0) 56 4e-08
SB_52411| Best HMM Match : No HMM Matches (HMM E-Value=.) 55 5e-08
SB_44408| Best HMM Match : DEAD (HMM E-Value=6.8005e-42) 54 8e-08
SB_11691| Best HMM Match : No HMM Matches (HMM E-Value=.) 53 2e-07
SB_45898| Best HMM Match : DEAD (HMM E-Value=1.3e-36) 52 3e-07
SB_9558| Best HMM Match : DEAD (HMM E-Value=0) 52 3e-07
SB_59075| Best HMM Match : Helicase_C (HMM E-Value=1.3e-19) 52 6e-07
SB_55073| Best HMM Match : Helicase_C (HMM E-Value=1.3e-19) 52 6e-07
SB_45527| Best HMM Match : DEAD (HMM E-Value=0.0069) 51 8e-07
SB_34731| Best HMM Match : DEAD (HMM E-Value=3.8e-31) 51 1e-06
SB_18655| Best HMM Match : No HMM Matches (HMM E-Value=.) 50 1e-06
SB_37968| Best HMM Match : DEAD (HMM E-Value=3.6) 49 3e-06
SB_43842| Best HMM Match : RNB (HMM E-Value=0) 46 4e-05
SB_17563| Best HMM Match : DEAD (HMM E-Value=0) 46 4e-05
SB_2247| Best HMM Match : DEAD (HMM E-Value=0) 46 4e-05
SB_46680| Best HMM Match : Helicase_C (HMM E-Value=3.8e-22) 45 5e-05
SB_14524| Best HMM Match : DEAD (HMM E-Value=3.7e-17) 44 9e-05
SB_5994| Best HMM Match : zf-CCHC (HMM E-Value=2.2e-19) 42 4e-04
SB_29417| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 5e-04
SB_3229| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.004
SB_48046| Best HMM Match : DEAD (HMM E-Value=4e-38) 39 0.004
SB_28853| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.004
SB_57459| Best HMM Match : DEAD (HMM E-Value=1.50001e-40) 37 0.013
SB_32980| Best HMM Match : DEAD (HMM E-Value=0) 37 0.013
SB_40196| Best HMM Match : DEAD (HMM E-Value=3.5e-07) 36 0.023
SB_43466| Best HMM Match : DEAD (HMM E-Value=1.8) 34 0.12
SB_38262| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.12
SB_55048| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.22
SB_51015| Best HMM Match : DEAD (HMM E-Value=0.0057) 31 0.66
SB_49218| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.1
SB_41683| Best HMM Match : DEAD (HMM E-Value=1.5e-27) 30 1.5
SB_53656| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.5
SB_46597| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.6
SB_24613| Best HMM Match : Ctr (HMM E-Value=0.73) 28 8.1
>SB_18993| Best HMM Match : DEAD (HMM E-Value=9.3e-41)
Length = 690
Score = 119 bits (286), Expect = 3e-27
Identities = 57/92 (61%), Positives = 69/92 (75%)
Frame = +1
Query: 235 HCAHKQPPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQAR 414
H H+ P ++ GDGPI LVL PTRELAQQ+Q+VA G +R+TC++GGAPK Q R
Sbjct: 120 HINHQ--PLLQPGDGPIVLVLCPTRELAQQVQEVAYSVGKHCKLRSTCIYGGAPKGPQIR 177
Query: 415 DLERGVEIVIATPGRLIDFLEKGTTNLQRCTF 510
+LERGVEI IATPGRLID LE TNL+RCT+
Sbjct: 178 ELERGVEICIATPGRLIDMLESRKTNLRRCTY 209
Score = 74.5 bits (175), Expect = 7e-14
Identities = 34/36 (94%), Positives = 35/36 (97%)
Frame = +3
Query: 510 LVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSA 617
LVLDEADRMLDMGFEPQIR II+QIRPDRQTLMWSA
Sbjct: 210 LVLDEADRMLDMGFEPQIRTIIDQIRPDRQTLMWSA 245
Score = 49.6 bits (113), Expect = 2e-06
Identities = 22/43 (51%), Positives = 29/43 (67%)
Frame = +3
Query: 21 EVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQ 149
++TV+G V P+ FEE+ FPDY+Q K G+ EPT IQAQ
Sbjct: 70 DLTVNGRNVPKPVTTFEESAFPDYIQSYFKREGFTEPTMIQAQ 112
Score = 27.9 bits (59), Expect = 8.1
Identities = 11/20 (55%), Positives = 14/20 (70%)
Frame = +2
Query: 626 PKEVXKLAXDYLGDYIQIHI 685
PKEV LA D+L DY+ I +
Sbjct: 248 PKEVQGLAHDFLSDYVHITV 267
>SB_16431| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 790
Score = 91.5 bits (217), Expect = 6e-19
Identities = 44/85 (51%), Positives = 55/85 (64%)
Frame = +1
Query: 256 PPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVE 435
P ++ GDGPI L+ APTREL QQI A FG + VFGG K EQ++ L+ G E
Sbjct: 583 PELQVGDGPIVLICAPTRELCQQIYTEARRFGKAYNIHVVAVFGGGNKYEQSKALQEGAE 642
Query: 436 IVIATPGRLIDFLEKGTTNLQRCTF 510
IV+ATPGRLID ++ TNL R T+
Sbjct: 643 IVVATPGRLIDHVKAKATNLHRVTY 667
Score = 46.0 bits (104), Expect = 3e-05
Identities = 22/70 (31%), Positives = 36/70 (51%), Gaps = 4/70 (5%)
Frame = +3
Query: 24 VTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVLK-- 197
+ VSG P F F + + ++ + Y +PT IQ Q PIA+SG++++G+ K
Sbjct: 505 IKVSGAMPARPCISFAHFGFDEQMMASIRKLEYTQPTQIQCQALPIALSGRDIIGIAKTG 564
Query: 198 --RVPAKRWP 221
+ A WP
Sbjct: 565 SGKTAAFLWP 574
Score = 31.1 bits (67), Expect = 0.87
Identities = 12/18 (66%), Positives = 16/18 (88%)
Frame = +2
Query: 194 QTGSGKTLAYILPAIVHI 247
+TGSGKT A++ PA+VHI
Sbjct: 562 KTGSGKTAAFLWPALVHI 579
Score = 29.9 bits (64), Expect = 2.0
Identities = 14/20 (70%), Positives = 14/20 (70%)
Frame = +3
Query: 492 LTAVHILVLDEADRMLDMGF 551
L V LV DEADRM DMGF
Sbjct: 662 LHRVTYLVFDEADRMFDMGF 681
>SB_25090| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1170
Score = 77.8 bits (183), Expect = 8e-15
Identities = 64/217 (29%), Positives = 98/217 (45%), Gaps = 10/217 (4%)
Frame = +3
Query: 21 EVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVLKR 200
EV VSG I FEEAN + V+ YK+PTP+Q PI ++G++++ +
Sbjct: 698 EVLVSGNNPVRHINSFEEANLYEAFLNNVRKAQYKKPTPVQKYSIPIVIAGRDVMACAQT 757
Query: 201 VPAKRWPTSCQPLCT*------TTTAYSER*WSDCFGLGAYQRVSTTNSASCCRFWTHIL 362
K P+ T T++++SE + + ++ +F +
Sbjct: 758 GSGKT-AAFLLPVMTSMMNAGLTSSSFSETQTPQAMCIAPTRELANQIYLEARKFAHGTM 816
Query: 363 CS*HVCVWWCS*KRASPGLGEGSRNSHCYSR*IN*FLGKGHNQLTAVHILVLDEADRMLD 542
VC S L G + F+ KG L + L+LDEADRMLD
Sbjct: 817 LRPVVCYGGVSVSHQLRQLQSGCNLLVGTPGRLTDFIEKGKVSLKGLQFLILDEADRMLD 876
Query: 543 MGFEPQIRKIIEQI----RPDRQTLMWSAYLAQKKXR 641
MGFEP IR+I+E + + +RQTLM+SA ++ R
Sbjct: 877 MGFEPAIRRIVESMGMPDKSERQTLMFSATFPEEIQR 913
Score = 70.1 bits (164), Expect = 2e-12
Identities = 33/77 (42%), Positives = 45/77 (58%)
Frame = +1
Query: 280 PIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGR 459
P A+ +APTRELA QI A F H + +R +GG Q R L+ G +++ TPGR
Sbjct: 789 PQAMCIAPTRELANQIYLEARKFAHGTMLRPVVCYGGVSVSHQLRQLQSGCNLLVGTPGR 848
Query: 460 LIDFLEKGTTNLQRCTF 510
L DF+EKG +L+ F
Sbjct: 849 LTDFIEKGKVSLKGLQF 865
Score = 28.3 bits (60), Expect = 6.1
Identities = 11/20 (55%), Positives = 15/20 (75%)
Frame = +2
Query: 194 QTGSGKTLAYILPAIVHINN 253
QTGSGKT A++LP + + N
Sbjct: 756 QTGSGKTAAFLLPVMTSMMN 775
>SB_3952| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 592
Score = 77.4 bits (182), Expect = 1e-14
Identities = 40/88 (45%), Positives = 52/88 (59%), Gaps = 3/88 (3%)
Frame = +1
Query: 256 PPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVE 435
P I G IA+V+ PTRELA QI + F + +R CV+GG EQ +L+RG E
Sbjct: 137 PVIMSGRDMIAIVMTPTRELAIQIHRECKKFCKPNNLRCVCVYGGTGISEQIAELKRGAE 196
Query: 436 IVIATPGRLIDFLEKG---TTNLQRCTF 510
I++ TPGR+ID L TN QRCT+
Sbjct: 197 IIVCTPGRMIDMLTANNGRVTNCQRCTY 224
Score = 54.4 bits (125), Expect = 8e-08
Identities = 30/44 (68%), Positives = 33/44 (75%), Gaps = 8/44 (18%)
Frame = +3
Query: 510 LVLDEADRMLDMGFEPQIRK--------IIEQIRPDRQTLMWSA 617
LVLDEADRM DMGFEPQI K II+ IRPDRQT+M+SA
Sbjct: 225 LVLDEADRMFDMGFEPQITKIRYPKVMRIIDCIRPDRQTVMFSA 268
Score = 39.9 bits (89), Expect = 0.002
Identities = 16/57 (28%), Positives = 32/57 (56%)
Frame = +3
Query: 24 VTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVL 194
+ V G P++ + + + +K Y++PTPIQAQ P+ MSG++++ ++
Sbjct: 93 IHVRGKNAPKPVKTWAQTGVQLKILDVLKKNSYEKPTPIQAQAIPVIMSGRDMIAIV 149
>SB_56998| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 478
Score = 70.1 bits (164), Expect = 2e-12
Identities = 34/69 (49%), Positives = 42/69 (60%)
Frame = +1
Query: 286 ALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLI 465
ALVLAPTRELAQQIQ+V G +V+ GG RE LE GV +V+ TPGR+
Sbjct: 162 ALVLAPTRELAQQIQKVVLALGDYMHVKCHACIGGTNVREDRMKLEEGVHVVVGTPGRVF 221
Query: 466 DFLEKGTTN 492
D + +G N
Sbjct: 222 DMINRGVLN 230
Score = 33.1 bits (72), Expect = 0.22
Identities = 15/39 (38%), Positives = 23/39 (58%)
Frame = +3
Query: 501 VHILVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSA 617
+ + VLDEAD ML GF+ QI + ++ Q ++ SA
Sbjct: 234 IKLFVLDEADEMLSRGFKDQIYDVFTRLPTSVQVVLLSA 272
>SB_37351| Best HMM Match : DEAD (HMM E-Value=0)
Length = 688
Score = 66.1 bits (154), Expect = 2e-11
Identities = 29/79 (36%), Positives = 49/79 (62%)
Frame = +1
Query: 265 RRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVI 444
+RG P LV+APTRELA+Q+ + S + C++GG P Q + G+++++
Sbjct: 143 KRGRAPKVLVMAPTRELAKQVGNEFENL--KSNLEVYCIYGGMPYEPQENAINSGLDVLV 200
Query: 445 ATPGRLIDFLEKGTTNLQR 501
TPGR++DF+ +GT +L +
Sbjct: 201 GTPGRILDFMRQGTLDLSK 219
Score = 39.5 bits (88), Expect = 0.002
Identities = 23/57 (40%), Positives = 36/57 (63%), Gaps = 5/57 (8%)
Frame = +3
Query: 468 FLGKGHNQLTAVHILVLDEADRMLDMGFEPQIRKII----EQIRPDR-QTLMWSAYL 623
F+ +G L+ + +VLDE DRMLDMGF + +++ + R D+ QTL++SA L
Sbjct: 209 FMRQGTLDLSKLKHVVLDEVDRMLDMGFAESVEEVLAASYAEDREDKPQTLLFSATL 265
>SB_19958| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 797
Score = 61.3 bits (142), Expect = 7e-10
Identities = 54/201 (26%), Positives = 83/201 (41%), Gaps = 5/201 (2%)
Frame = +3
Query: 30 VSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVLKRVPA 209
VSG I F E F + + + GY+ PTP+Q PI M+G++L+ +
Sbjct: 469 VSGENQPPKITSFNELPFGEQLMANISRAGYRRPTPVQKAALPIVMAGRDLMACAQTGSG 528
Query: 210 KRWPTSCQPLCT*TTTAYSER*WSD-CFGLGAYQRVSTTNSASCCRFWTHILCS*HVCVW 386
K L + + S + + ++ +F H VC
Sbjct: 529 KTAAYMLPVLTSLIKQGLNAPPRSPLALCVAPTRELAKQIYIEARKFSDHTPIKVCVCYG 588
Query: 387 WCS*KRASPGLGEGSRNSHCYSR*IN*FLGKGHNQLTAVHILVLDEADRMLDMGFEPQIR 566
S + L G + F+ + L ++ L+LDEADRMLD+GF P I
Sbjct: 589 GVSVPYQASQLERGCHFLVGTPGRLQDFVSREKIYLGSIQHLILDEADRMLDLGFGPDIH 648
Query: 567 KIIEQ----IRPDRQTLMWSA 617
K+IE+ + RQTLM+SA
Sbjct: 649 KLIEESNMTAKESRQTLMFSA 669
Score = 58.4 bits (135), Expect = 5e-09
Identities = 29/67 (43%), Positives = 40/67 (59%)
Frame = +1
Query: 280 PIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGR 459
P+AL +APTRELA+QI A F + ++ +GG QA LERG ++ TPGR
Sbjct: 553 PLALCVAPTRELAKQIYIEARKFSDHTPIKVCVCYGGVSVPYQASQLERGCHFLVGTPGR 612
Query: 460 LIDFLEK 480
L DF+ +
Sbjct: 613 LQDFVSR 619
Score = 28.7 bits (61), Expect = 4.6
Identities = 11/18 (61%), Positives = 14/18 (77%)
Frame = +2
Query: 194 QTGSGKTLAYILPAIVHI 247
QTGSGKT AY+LP + +
Sbjct: 524 QTGSGKTAAYMLPVLTSL 541
>SB_30826| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1375
Score = 57.6 bits (133), Expect = 9e-09
Identities = 31/53 (58%), Positives = 39/53 (73%), Gaps = 4/53 (7%)
Frame = +3
Query: 471 LGKGHNQLTAVHILVLDEADRMLDMGFEPQIRKIIEQ-IRPD---RQTLMWSA 617
+ +G L ++ LVLDEADRMLDMGFEPQIR+I++Q P RQTLM+SA
Sbjct: 990 MDRGRVGLDSIRFLVLDEADRMLDMGFEPQIRRIVDQDSMPKTGIRQTLMFSA 1042
Score = 52.8 bits (121), Expect = 2e-07
Identities = 27/81 (33%), Positives = 40/81 (49%), Gaps = 1/81 (1%)
Frame = +1
Query: 271 GDGPIALVLAPT-RELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIA 447
G G A L P + + DF + S R V+GGA Q R+L+R +++A
Sbjct: 922 GSGKTAAFLIPILSRIYMEGPPAPPDFSYRSLCRPCVVYGGADIGSQLRELDRNCHLLVA 981
Query: 448 TPGRLIDFLEKGTTNLQRCTF 510
TPGRL+D +++G L F
Sbjct: 982 TPGRLVDMMDRGRVGLDSIRF 1002
Score = 32.3 bits (70), Expect = 0.38
Identities = 14/43 (32%), Positives = 23/43 (53%)
Frame = +3
Query: 57 IQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLV 185
I FE+ + + + V GYK+PTP+Q PI ++L+
Sbjct: 874 ILQFEDVDLGEILLHNVGLAGYKKPTPVQKYAIPIVKGKRDLM 916
>SB_52320| Best HMM Match : DEAD (HMM E-Value=0)
Length = 340
Score = 55.6 bits (128), Expect = 4e-08
Identities = 25/41 (60%), Positives = 33/41 (80%)
Frame = +3
Query: 495 TAVHILVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSA 617
T++ ILVLDEADR+LDMGF P + IIE + +RQTL++SA
Sbjct: 195 TSLQILVLDEADRILDMGFAPTLNAIIENLPSERQTLLYSA 235
Score = 46.4 bits (105), Expect = 2e-05
Identities = 31/79 (39%), Positives = 44/79 (55%), Gaps = 1/79 (1%)
Frame = +1
Query: 274 DGPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAP-KREQARDLERGVEIVIAT 450
DG ALV++PTRELA Q +V G+ + + GG K EQ R ++ IV+ T
Sbjct: 121 DGLGALVISPTRELAYQTFEVLVKIGNKHDLSAGLIIGGKDLKNEQKRIMK--TNIVVCT 178
Query: 451 PGRLIDFLEKGTTNLQRCT 507
PGRL+ +++ T N CT
Sbjct: 179 PGRLLQHMDE-TPNFD-CT 195
Score = 35.9 bits (79), Expect = 0.031
Identities = 15/47 (31%), Positives = 26/47 (55%)
Frame = +3
Query: 57 IQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVLK 197
++ F + G+ G+ PT IQ QG P+A+SG++++G K
Sbjct: 49 VEKFSDFPISKRTLDGLMKAGFVTPTDIQKQGIPVALSGRDVLGAAK 95
>SB_52411| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 370
Score = 55.2 bits (127), Expect = 5e-08
Identities = 30/67 (44%), Positives = 37/67 (55%)
Frame = +1
Query: 280 PIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGR 459
P ALVL+PTRELA QIQ+V G V+ GG E R L+ G IV TPGR
Sbjct: 66 PQALVLSPTRELANQIQKVVLALGDYMSVQCHACIGGTNIGEDIRKLDYGQHIVSGTPGR 125
Query: 460 LIDFLEK 480
+ D + +
Sbjct: 126 VFDMIRR 132
Score = 38.3 bits (85), Expect = 0.006
Identities = 18/42 (42%), Positives = 27/42 (64%)
Frame = +3
Query: 498 AVHILVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSAYL 623
++ +LVLDEAD ML+ GF+ QI + + P Q ++ SA L
Sbjct: 139 SIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVVLLSATL 180
>SB_44408| Best HMM Match : DEAD (HMM E-Value=6.8005e-42)
Length = 238
Score = 54.4 bits (125), Expect = 8e-08
Identities = 37/105 (35%), Positives = 52/105 (49%)
Frame = +1
Query: 286 ALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLI 465
AL+L PTRELA QI + G V+ + GG QA L + I+IATPGRLI
Sbjct: 35 ALILTPTRELAFQISEQCEALGSGIGVKCAVIVGGIDMMSQALMLAKKPHIIIATPGRLI 94
Query: 466 DFLEKGTTNLQRCTF*FLMRLIVCWIWDLNHKSEKSLSKYAQTDR 600
D LE T T +L+ I +++ + E + + +T R
Sbjct: 95 DHLE-NTKGFSLRTLKYLVMDEADRILNMDFEKEDYIHRVGRTAR 138
>SB_11691| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1448
Score = 53.2 bits (122), Expect = 2e-07
Identities = 28/71 (39%), Positives = 42/71 (59%)
Frame = +1
Query: 265 RRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVI 444
R G G I +++PTREL+ Q VA D + GG ++ +A L++GV ++I
Sbjct: 642 RNGTGVI--IISPTRELSLQTYGVARDLLKHHNFTYGIIMGGVNRKAEAERLQKGVNLLI 699
Query: 445 ATPGRLIDFLE 477
ATPGRL+D L+
Sbjct: 700 ATPGRLLDHLQ 710
Score = 44.0 bits (99), Expect = 1e-04
Identities = 19/36 (52%), Positives = 30/36 (83%)
Frame = +3
Query: 510 LVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSA 617
LV+DEADR+L++GFE ++R+II + RQT+++SA
Sbjct: 723 LVIDEADRILEIGFEEEMRQIIRILPSKRQTVLFSA 758
Score = 28.3 bits (60), Expect = 6.1
Identities = 13/44 (29%), Positives = 21/44 (47%)
Frame = +2
Query: 107 KDNGLQRTDAYSSSRLADSYVWKEFSWRTQTGSGKTLAYILPAI 238
KD G +A ++ +TGSGKTLA+++P +
Sbjct: 588 KDMGFTTMTEIQHKSIAPLLKGRDLLGAAKTGSGKTLAFLVPVV 631
>SB_45898| Best HMM Match : DEAD (HMM E-Value=1.3e-36)
Length = 428
Score = 52.4 bits (120), Expect = 3e-07
Identities = 21/56 (37%), Positives = 36/56 (64%)
Frame = +3
Query: 24 VTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGV 191
++ G + PI+ ++EA PD + + V +GYK+PTPIQ Q PI + ++++GV
Sbjct: 89 ISTKGGRIPFPIRKWKEAQIPDSILEIVDKLGYKDPTPIQRQAIPIGLQNRDIIGV 144
Score = 47.6 bits (108), Expect = 9e-06
Identities = 22/41 (53%), Positives = 27/41 (65%)
Frame = +1
Query: 277 GPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPK 399
GP AL+LAPTRELAQQI++ FG +R V GGA +
Sbjct: 178 GPYALILAPTRELAQQIEEEILKFGRPLGIRTVSVIGGADR 218
Score = 38.3 bits (85), Expect = 0.006
Identities = 14/26 (53%), Positives = 22/26 (84%)
Frame = +3
Query: 507 ILVLDEADRMLDMGFEPQIRKIIEQI 584
+ V+ ADRM+DMGFEP+++KI+E +
Sbjct: 210 VSVIGGADRMIDMGFEPEVQKILEHL 235
>SB_9558| Best HMM Match : DEAD (HMM E-Value=0)
Length = 436
Score = 52.4 bits (120), Expect = 3e-07
Identities = 31/79 (39%), Positives = 41/79 (51%), Gaps = 1/79 (1%)
Frame = +1
Query: 277 GPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPG 456
G A+VL PTRELA QI G ++ + GG +QA L +VIATPG
Sbjct: 75 GIFAVVLTPTRELAFQIADQFKVLGRPIGLKEAVIVGGLDMMKQALSLANKPHVVIATPG 134
Query: 457 RLIDFLEK-GTTNLQRCTF 510
RL D ++ T NL++ F
Sbjct: 135 RLADHIKSTDTLNLKKIQF 153
Score = 41.9 bits (94), Expect = 5e-04
Identities = 20/44 (45%), Positives = 28/44 (63%)
Frame = +3
Query: 492 LTAVHILVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSAYL 623
L + LVLDEADR+LD F ++ I + + RQTL++SA L
Sbjct: 148 LKKIQFLVLDEADRLLDPSFGDDLKVIFDAVPEKRQTLLFSATL 191
>SB_59075| Best HMM Match : Helicase_C (HMM E-Value=1.3e-19)
Length = 445
Score = 51.6 bits (118), Expect = 6e-07
Identities = 23/41 (56%), Positives = 30/41 (73%)
Frame = +3
Query: 510 LVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSAYLAQK 632
LVLDEADRM+DMGFE +R I + RQTL++SA + +K
Sbjct: 20 LVLDEADRMIDMGFEEDVRTIFSYFKSQRQTLLFSATMPKK 60
>SB_55073| Best HMM Match : Helicase_C (HMM E-Value=1.3e-19)
Length = 212
Score = 51.6 bits (118), Expect = 6e-07
Identities = 23/41 (56%), Positives = 30/41 (73%)
Frame = +3
Query: 510 LVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSAYLAQK 632
LVLDEADRM+DMGFE +R I + RQTL++SA + +K
Sbjct: 20 LVLDEADRMIDMGFEEDVRTIFSYFKSQRQTLLFSATMPKK 60
>SB_45527| Best HMM Match : DEAD (HMM E-Value=0.0069)
Length = 120
Score = 51.2 bits (117), Expect = 8e-07
Identities = 29/61 (47%), Positives = 34/61 (55%)
Frame = +1
Query: 280 PIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGR 459
P ALVL+PTRELA QIQ+V G V+ GG E R L+ G IV TPGR
Sbjct: 4 PQALVLSPTRELANQIQKVVLALGDYMSVQCHACIGGTNIGEDIRKLDYGQHIVSGTPGR 63
Query: 460 L 462
+
Sbjct: 64 V 64
>SB_34731| Best HMM Match : DEAD (HMM E-Value=3.8e-31)
Length = 978
Score = 50.8 bits (116), Expect = 1e-06
Identities = 24/67 (35%), Positives = 39/67 (58%)
Frame = +1
Query: 280 PIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGR 459
P A ++ P RELA QI + A H + R+ + GG ++ DLE V++++ATPG
Sbjct: 456 PRACIVVPARELATQILKTAKSLCHHARFRSVGLIGGRKQKWMRDDLESPVDLLVATPGT 515
Query: 460 LIDFLEK 480
L+ + +K
Sbjct: 516 LLKYRQK 522
Score = 29.5 bits (63), Expect = 2.7
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = +2
Query: 194 QTGSGKTLAYILPAIVHINNHRLFGEVMVRL 286
QTGSGKTLAY+ P + + ++ RL
Sbjct: 423 QTGSGKTLAYLAPLVHRLREDEERHGILARL 453
>SB_18655| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 697
Score = 50.4 bits (115), Expect = 1e-06
Identities = 26/70 (37%), Positives = 42/70 (60%)
Frame = +1
Query: 283 IALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRL 462
+AL++APTRELA Q++ + V+ + GG +Q R L++ EIV+ATPGRL
Sbjct: 220 LALIMAPTRELALQVKDHLVKAAKYTSVKVAAIVGGMAAPKQQRLLKQRPEIVVATPGRL 279
Query: 463 IDFLEKGTTN 492
+ + + T+
Sbjct: 280 WELISQVFTH 289
Score = 30.7 bits (66), Expect = 1.1
Identities = 15/51 (29%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Frame = +2
Query: 110 DNGLQRTDAYSSSRLADSYVW-KEFSWRTQTGSGKTLAYILPAIVHINNHR 259
D G + S + + ++ ++ +TGSGKTLA+ +P I HI ++
Sbjct: 147 DQGFSKPTPIQSLSIPPALLYHRDIIGAAETGSGKTLAFGIPIIQHIEAYK 197
Score = 29.5 bits (63), Expect = 2.7
Identities = 12/33 (36%), Positives = 21/33 (63%)
Frame = +3
Query: 486 NQLTAVHILVLDEADRMLDMGFEPQIRKIIEQI 584
+ + + LV+DEADRM++ G ++ I+E I
Sbjct: 335 SNIQLLRYLVIDEADRMVEQGHYEELSSILELI 367
>SB_37968| Best HMM Match : DEAD (HMM E-Value=3.6)
Length = 127
Score = 49.2 bits (112), Expect = 3e-06
Identities = 23/39 (58%), Positives = 30/39 (76%)
Frame = +3
Query: 501 VHILVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSA 617
V ILVLDEADRMLDMGF IR+++ ++ RQ L++SA
Sbjct: 4 VEILVLDEADRMLDMGFIHDIRRVLTKLPAKRQNLLFSA 42
>SB_43842| Best HMM Match : RNB (HMM E-Value=0)
Length = 1238
Score = 45.6 bits (103), Expect = 4e-05
Identities = 33/92 (35%), Positives = 42/92 (45%), Gaps = 22/92 (23%)
Frame = +1
Query: 259 PIRRGDGPIALVLAPTRELAQQI---------------------QQVAADFGH-TSYVRN 372
P GD P+AL+L PTREL QQ+ Q V D T+ +
Sbjct: 139 PSNPGDTPVALILTPTRELMQQVFMNVSEMLDVIRCPGNPGPSNQSVIYDTQQFTARYKA 198
Query: 373 TCVFGGAPKREQARDLERGVEIVIATPGRLID 468
V GG P Q L G ++V+ATPGRL+D
Sbjct: 199 VAVCGGVPVSTQTIALREGADVVVATPGRLLD 230
Score = 44.4 bits (100), Expect = 9e-05
Identities = 25/53 (47%), Positives = 31/53 (58%), Gaps = 3/53 (5%)
Frame = +3
Query: 492 LTAVHILVLDEADRMLDMGFEPQIRKII---EQIRPDRQTLMWSAYLAQKKXR 641
L + LV+DE DRML MG E Q+RKI+ RQTL+WSA L + R
Sbjct: 231 LYKITYLVMDEPDRMLGMGMEEQLRKIVGLATGTSRARQTLLWSATLPESLER 283
Score = 42.7 bits (96), Expect = 3e-04
Identities = 21/73 (28%), Positives = 36/73 (49%)
Frame = +3
Query: 24 VTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVLKRV 203
+ + G + PI+ F + N P + + ++ PTPIQ Q MSG++++G+ +
Sbjct: 60 IHIEGEDCPKPIESFHDLNLPPELSTYLAKKNFQVPTPIQMQSLSCVMSGRDIIGLAETG 119
Query: 204 PAKRWPTSCQPLC 242
K S PLC
Sbjct: 120 SGKTLAYSL-PLC 131
>SB_17563| Best HMM Match : DEAD (HMM E-Value=0)
Length = 439
Score = 45.6 bits (103), Expect = 4e-05
Identities = 25/80 (31%), Positives = 40/80 (50%), Gaps = 7/80 (8%)
Frame = +1
Query: 286 ALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERG-------VEIVI 444
ALVL PTRELA Q Q+ + G + GG ++ L V +++
Sbjct: 118 ALVLVPTRELALQTSQICIELGKHMGAQVMVTTGGTSLKDDILRLYNKDIFVHVVVHVIV 177
Query: 445 ATPGRLIDFLEKGTTNLQRC 504
ATPGR++D ++K ++ +C
Sbjct: 178 ATPGRVLDLMKKKLADMSKC 197
Score = 39.1 bits (87), Expect = 0.003
Identities = 16/42 (38%), Positives = 30/42 (71%)
Frame = +3
Query: 492 LTAVHILVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSA 617
++ +LV+DEAD++L M F+ + +II+ + +RQ L++SA
Sbjct: 194 MSKCQMLVMDEADKLLSMDFKKMLEQIIKHLPENRQILLFSA 235
Score = 31.5 bits (68), Expect = 0.66
Identities = 13/49 (26%), Positives = 27/49 (55%)
Frame = +3
Query: 66 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVLKRVPAK 212
FE+ + G+ G+ +P+PIQ + P+A++G++++ K K
Sbjct: 49 FEDYCLKRELLMGIFEKGFDKPSPIQEESIPVALAGRDILARAKNGTGK 97
>SB_2247| Best HMM Match : DEAD (HMM E-Value=0)
Length = 439
Score = 45.6 bits (103), Expect = 4e-05
Identities = 25/80 (31%), Positives = 40/80 (50%), Gaps = 7/80 (8%)
Frame = +1
Query: 286 ALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERG-------VEIVI 444
ALVL PTRELA Q Q+ + G + GG ++ L V +++
Sbjct: 118 ALVLVPTRELALQTSQICIELGKHMGAQVMVTTGGTSLKDDILRLYNKDIFVHVVVHVIV 177
Query: 445 ATPGRLIDFLEKGTTNLQRC 504
ATPGR++D ++K ++ +C
Sbjct: 178 ATPGRVLDLMKKKLADMSKC 197
Score = 39.1 bits (87), Expect = 0.003
Identities = 16/42 (38%), Positives = 30/42 (71%)
Frame = +3
Query: 492 LTAVHILVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSA 617
++ +LV+DEAD++L M F+ + +II+ + +RQ L++SA
Sbjct: 194 MSKCQMLVMDEADKLLSMDFKKMLEQIIKHLPENRQILLFSA 235
Score = 31.5 bits (68), Expect = 0.66
Identities = 13/49 (26%), Positives = 27/49 (55%)
Frame = +3
Query: 66 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVLKRVPAK 212
FE+ + G+ G+ +P+PIQ + P+A++G++++ K K
Sbjct: 49 FEDYCLKRELLMGIFEKGFDKPSPIQEESIPVALAGRDILARAKNGTGK 97
>SB_46680| Best HMM Match : Helicase_C (HMM E-Value=3.8e-22)
Length = 1058
Score = 45.2 bits (102), Expect = 5e-05
Identities = 22/63 (34%), Positives = 31/63 (49%), Gaps = 4/63 (6%)
Frame = +3
Query: 12 NNHEVTVSGVEVHNPIQYF----EEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKN 179
+ + V G +V +P++ F E FPDY+ V+ GY PTPIQ Q P+ G
Sbjct: 143 HEQHIYVKGADVPDPVETFSQLIERYGFPDYIIHNVQERGYTTPTPIQMQATPLMAHGPK 202
Query: 180 LVG 188
G
Sbjct: 203 KSG 205
Score = 29.9 bits (64), Expect = 2.0
Identities = 19/64 (29%), Positives = 29/64 (45%), Gaps = 1/64 (1%)
Frame = +1
Query: 286 ALVLAPTRELAQQIQQVAADFGHTSYVR-NTCVFGGAPKREQARDLERGVEIVIATPGRL 462
A+V++PTRELAQQI + R + A + +I++ TP RL
Sbjct: 208 AVVVSPTRELAQQIYREFCHLAKGCAFRIHVLTKANASTNTFGAKSSKRFDILVTTPNRL 267
Query: 463 IDFL 474
+ L
Sbjct: 268 VHLL 271
>SB_14524| Best HMM Match : DEAD (HMM E-Value=3.7e-17)
Length = 500
Score = 44.4 bits (100), Expect = 9e-05
Identities = 21/69 (30%), Positives = 36/69 (52%)
Frame = +3
Query: 21 EVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVLKR 200
E+ V G V +P+ F +F + + + + GY PTPIQ Q P+ +SG++++
Sbjct: 183 EIKVKGEHVVSPVLEFFHCSFNESLSKNLSNHGYHSPTPIQMQVLPVLLSGRDVMVCAST 242
Query: 201 VPAKRWPTS 227
K P+S
Sbjct: 243 GSGKLLPSS 251
Score = 43.6 bits (98), Expect = 2e-04
Identities = 20/42 (47%), Positives = 31/42 (73%)
Frame = +3
Query: 492 LTAVHILVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSA 617
LT V V+DE D ML +GFE Q+++I+E++ RQT+++SA
Sbjct: 277 LTHVIGCVVDEVDTMLQLGFEQQVQQILERLSNRRQTMLFSA 318
Score = 30.7 bits (66), Expect = 1.1
Identities = 9/25 (36%), Positives = 19/25 (76%)
Frame = +1
Query: 421 ERGVEIVIATPGRLIDFLEKGTTNL 495
E GV++++ATPGR+++ + + +L
Sbjct: 253 EMGVQVIVATPGRMVEIISRQAVDL 277
>SB_5994| Best HMM Match : zf-CCHC (HMM E-Value=2.2e-19)
Length = 185
Score = 42.3 bits (95), Expect = 4e-04
Identities = 21/55 (38%), Positives = 31/55 (56%)
Frame = +3
Query: 21 EVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLV 185
EV VSG I FEEAN + V+ YK+PTP+Q PI ++G++++
Sbjct: 121 EVLVSGNNPVRHINSFEEANLYEAFLNNVRKAQYKKPTPVQKYSIPIVIAGRDVM 175
>SB_29417| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 268
Score = 41.9 bits (94), Expect = 5e-04
Identities = 18/25 (72%), Positives = 22/25 (88%)
Frame = +3
Query: 543 MGFEPQIRKIIEQIRPDRQTLMWSA 617
MGFEP+I+KI+ IRPDRQT+M SA
Sbjct: 1 MGFEPEIKKILLDIRPDRQTVMTSA 25
>SB_3229| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 45
Score = 38.7 bits (86), Expect = 0.004
Identities = 16/38 (42%), Positives = 23/38 (60%)
Frame = +1
Query: 370 NTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKG 483
+ C+ GG RE LE GV +V+ TPGR+ D + +G
Sbjct: 6 HACI-GGTNVREDRMKLEEGVHVVVGTPGRVFDMINRG 42
>SB_48046| Best HMM Match : DEAD (HMM E-Value=4e-38)
Length = 475
Score = 38.7 bits (86), Expect = 0.004
Identities = 26/78 (33%), Positives = 42/78 (53%), Gaps = 3/78 (3%)
Frame = +1
Query: 274 DGPIA-LVLAPTRELAQQIQQVAADF-GHTSYVRNTCVFGGAPKREQARDLERGV-EIVI 444
DG ++ LV+ TRELA QI + F + S ++ FGG ++ + L+ IV+
Sbjct: 113 DGQVSVLVMCHTRELAFQIHKEYERFCKYMSNIKIAVFFGGINIKKDQQTLKTNCPHIVV 172
Query: 445 ATPGRLIDFLEKGTTNLQ 498
TPGR++ + T NL+
Sbjct: 173 GTPGRILALTREKTLNLK 190
>SB_28853| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 208
Score = 38.7 bits (86), Expect = 0.004
Identities = 26/78 (33%), Positives = 42/78 (53%), Gaps = 3/78 (3%)
Frame = +1
Query: 274 DGPIA-LVLAPTRELAQQIQQVAADF-GHTSYVRNTCVFGGAPKREQARDLERGV-EIVI 444
DG ++ LV+ TRELA QI + F + S ++ FGG ++ + L+ IV+
Sbjct: 113 DGQVSVLVMCHTRELAFQIHKEYERFCKYMSNIKIAVFFGGINIKKDQQTLKTNCPHIVV 172
Query: 445 ATPGRLIDFLEKGTTNLQ 498
TPGR++ + T NL+
Sbjct: 173 GTPGRILALTREKTLNLK 190
>SB_57459| Best HMM Match : DEAD (HMM E-Value=1.50001e-40)
Length = 490
Score = 37.1 bits (82), Expect = 0.013
Identities = 25/70 (35%), Positives = 39/70 (55%), Gaps = 3/70 (4%)
Frame = +1
Query: 280 PIALVLAPTRELAQQIQQVAADFG-HTSYVR-NTCVFGGA-PKREQARDLERGVEIVIAT 450
P + L+PT ELA+Q +VA G H +++ N V G P+ ++ D I+I T
Sbjct: 174 PQVICLSPTYELARQTGKVAEAMGKHCPHIKINYAVRGNQFPRGQKCTD-----HIIIGT 228
Query: 451 PGRLIDFLEK 480
PG L+D++ K
Sbjct: 229 PGTLLDWIRK 238
Score = 29.1 bits (62), Expect = 3.5
Identities = 16/54 (29%), Positives = 29/54 (53%), Gaps = 3/54 (5%)
Frame = +3
Query: 18 HEVTVSGVEVHNPI---QYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMS 170
HEV V + +P+ + FEE +++GV MG+ +P+ IQ P+ ++
Sbjct: 86 HEVEVLRSDPSSPLYSAKSFEELPLSANLRRGVYDMGFNKPSKIQETALPMLLA 139
>SB_32980| Best HMM Match : DEAD (HMM E-Value=0)
Length = 985
Score = 37.1 bits (82), Expect = 0.013
Identities = 19/59 (32%), Positives = 32/59 (54%)
Frame = +3
Query: 498 AVHILVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSAYLAQKKXRNLLXITWEITF 674
+V + +LDEAD++LD F+ QI I + ++Q + +SA + +L E TF
Sbjct: 155 SVRMFILDEADKLLDESFQQQINWIFSALPENKQMMAFSATYPEVLANHLKKYMTEPTF 213
Score = 35.5 bits (78), Expect = 0.040
Identities = 21/65 (32%), Positives = 33/65 (50%), Gaps = 1/65 (1%)
Frame = +1
Query: 289 LVLAPTRELAQQIQQVAADFGHTSYVRNTC-VFGGAPKREQARDLERGVEIVIATPGRLI 465
++L PTRE+A Q++ V G Y C VF G E+ + + I + TPGR+
Sbjct: 85 IILTPTREIAVQVKDVICAIG-CHYDGLACKVFIGGISLEEDKKALKSCHIAVGTPGRVK 143
Query: 466 DFLEK 480
+E+
Sbjct: 144 YLIEQ 148
>SB_40196| Best HMM Match : DEAD (HMM E-Value=3.5e-07)
Length = 456
Score = 36.3 bits (80), Expect = 0.023
Identities = 20/77 (25%), Positives = 38/77 (49%), Gaps = 1/77 (1%)
Frame = +1
Query: 274 DGPIALVLAPTRELAQQIQQVAADF-GHTSYVRNTCVFGGAPKREQARDLERGVEIVIAT 450
+GP+ L+L + ++ V D + R +FGG + ++ L G E+++AT
Sbjct: 262 NGPLVLILCTNWQNTARVYGVCEDLIRNRRRTRVQMIFGGGAEEDRIVPLINGCEVLVAT 321
Query: 451 PGRLIDFLEKGTTNLQR 501
P + L++ T+L R
Sbjct: 322 PPCFLRMLKRCYTSLDR 338
>SB_43466| Best HMM Match : DEAD (HMM E-Value=1.8)
Length = 210
Score = 33.9 bits (74), Expect = 0.12
Identities = 15/34 (44%), Positives = 22/34 (64%)
Frame = +3
Query: 498 AVHILVLDEADRMLDMGFEPQIRKIIEQIRPDRQ 599
++ +LVLDEAD ML+ GF+ QI + + P Q
Sbjct: 35 SIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQ 68
>SB_38262| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1039
Score = 33.9 bits (74), Expect = 0.12
Identities = 14/35 (40%), Positives = 24/35 (68%)
Frame = +1
Query: 286 ALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGG 390
AL+L+PTRELA Q Q+ + G + ++++ + GG
Sbjct: 354 ALILSPTRELALQTQKFIKELGRFTGLKSSVILGG 388
>SB_55048| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 27
Score = 33.1 bits (72), Expect = 0.22
Identities = 12/20 (60%), Positives = 17/20 (85%)
Frame = +1
Query: 415 DLERGVEIVIATPGRLIDFL 474
+L+RG EI++ TPGR+ID L
Sbjct: 3 ELKRGAEIIVCTPGRMIDML 22
>SB_51015| Best HMM Match : DEAD (HMM E-Value=0.0057)
Length = 96
Score = 31.5 bits (68), Expect = 0.66
Identities = 12/28 (42%), Positives = 19/28 (67%)
Frame = +3
Query: 99 QGVKTMGYKEPTPIQAQGWPIAMSGKNL 182
+ V +G+ PTPIQA P+A+ GK++
Sbjct: 23 RAVNELGFLHPTPIQASTIPVALMGKDV 50
>SB_49218| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 480
Score = 30.7 bits (66), Expect = 1.1
Identities = 11/38 (28%), Positives = 17/38 (44%)
Frame = +3
Query: 42 EVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGW 155
++H P++ + FP Y + Y P P QA W
Sbjct: 6 DIHGPVRKLHKHGFPGYEEDYAAVFKYPTPWPEQAMEW 43
>SB_41683| Best HMM Match : DEAD (HMM E-Value=1.5e-27)
Length = 559
Score = 30.3 bits (65), Expect = 1.5
Identities = 24/79 (30%), Positives = 39/79 (49%), Gaps = 2/79 (2%)
Frame = +1
Query: 271 GDGPIALVLAPTRELA-QQIQQVAADFGHTSYVRNTCVFGGAPKREQ-ARDLERGVEIVI 444
G G +++ PTRELA Q + +V+ G S V + ++E+ +D IVI
Sbjct: 223 GRGYGTIIVVPTRELASQMLYEVSRLLGDKSIVASFVSGVDLSRQEKLLKDSLHPPRIVI 282
Query: 445 ATPGRLIDFLEKGTTNLQR 501
TP RL + +++ QR
Sbjct: 283 GTPKRLWEIVQEHEHLFQR 301
>SB_53656| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 51
Score = 29.1 bits (62), Expect = 3.5
Identities = 12/25 (48%), Positives = 18/25 (72%)
Frame = +3
Query: 510 LVLDEADRMLDMGFEPQIRKIIEQI 584
LV+DEADRM++ G ++ I+E I
Sbjct: 14 LVIDEADRMVEQGHYEELSSILELI 38
>SB_46597| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 285
Score = 28.7 bits (61), Expect = 4.6
Identities = 14/53 (26%), Positives = 24/53 (45%)
Frame = +3
Query: 510 LVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSAYLAQKKXRNLLXITWEI 668
L ++E R L + K++ +P W AYL Q++ R + TW +
Sbjct: 179 LDVEEGQRALPTSIAIALWKLVFSKKPPLVLEKWFAYLGQREVRGISRDTWNM 231
>SB_24613| Best HMM Match : Ctr (HMM E-Value=0.73)
Length = 895
Score = 27.9 bits (59), Expect = 8.1
Identities = 11/24 (45%), Positives = 17/24 (70%)
Frame = +3
Query: 516 LDEADRMLDMGFEPQIRKIIEQIR 587
LDEAD+M+D F R+++E I+
Sbjct: 388 LDEADKMIDAYFREMQRRLMEDIK 411
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,792,276
Number of Sequences: 59808
Number of extensions: 510273
Number of successful extensions: 1149
Number of sequences better than 10.0: 42
Number of HSP's better than 10.0 without gapping: 1016
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1137
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1769412099
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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