Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060966.seq
         (685 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein ...    63   9e-12
AY263175-1|AAP78790.1|  814|Anopheles gambiae TmcA-like protein ...    23   9.0  
AJ441131-8|CAD29637.1|  756|Anopheles gambiae putative 5-oxoprol...    23   9.0  
AJ439398-7|CAD28130.1| 1344|Anopheles gambiae putative 5-oxoprol...    23   9.0  

>AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein
           protein.
          Length = 596

 Score = 62.9 bits (146), Expect = 9e-12
 Identities = 30/97 (30%), Positives = 50/97 (51%)
 Frame = +1

Query: 220 LHLASHCAHKQPPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPK 399
           L +  H   K+     R   P  +++APTRELA QI      F H + ++    +GG   
Sbjct: 230 LPMIHHLLDKEDSLELRTRNPYIVIVAPTRELAIQIHDEGRKFAHGTKLKVCVSYGGTAV 289

Query: 400 REQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTF 510
           + Q + +  G  +++ATPGRL+DF+++G    +   F
Sbjct: 290 QHQLQLMRGGCHVLVATPGRLLDFIDRGYVTFENVNF 326



 Score = 49.6 bits (113), Expect = 9e-08
 Identities = 26/54 (48%), Positives = 35/54 (64%), Gaps = 4/54 (7%)
 Frame = +3

Query: 468 FLGKGHNQLTAVHILVLDEADRMLDMGFEPQIRKIIEQI----RPDRQTLMWSA 617
           F+ +G+     V+ +VLDEADRMLDMGF P I K++       +  RQTLM+SA
Sbjct: 313 FIDRGYVTFENVNFVVLDEADRMLDMGFLPSIEKVMGHATMPEKQQRQTLMFSA 366



 Score = 39.9 bits (89), Expect = 7e-05
 Identities = 18/55 (32%), Positives = 31/55 (56%)
 Frame = +3

Query: 21  EVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLV 185
           +V VSG    + ++ FE +   + V   V+   Y +PTPIQ    PI ++G++L+
Sbjct: 161 QVRVSGENPPDHVESFERSGLREEVMTNVRKSSYTKPTPIQRYAIPIILNGRDLM 215



 Score = 29.9 bits (64), Expect = 0.078
 Identities = 12/18 (66%), Positives = 15/18 (83%)
 Frame = +2

Query: 194 QTGSGKTLAYILPAIVHI 247
           QTGSGKT A++LP I H+
Sbjct: 219 QTGSGKTAAFMLPMIHHL 236


>AY263175-1|AAP78790.1|  814|Anopheles gambiae TmcA-like protein
           protein.
          Length = 814

 Score = 23.0 bits (47), Expect = 9.0
 Identities = 8/19 (42%), Positives = 10/19 (52%)
 Frame = +1

Query: 514 FLMRLIVCWIWDLNHKSEK 570
           F+  +  CW WDL  K  K
Sbjct: 515 FVRYMNSCWCWDLEKKFPK 533


>AJ441131-8|CAD29637.1|  756|Anopheles gambiae putative
           5-oxoprolinase protein.
          Length = 756

 Score = 23.0 bits (47), Expect = 9.0
 Identities = 9/25 (36%), Positives = 15/25 (60%)
 Frame = -1

Query: 382 THTCYEHKMCVQNLQQLAEFVVLTL 308
           ++ C EH++CV  + Q   F  +TL
Sbjct: 199 SYACPEHELCVGRIAQELGFQHVTL 223


>AJ439398-7|CAD28130.1| 1344|Anopheles gambiae putative
           5-oxoprolinase protein.
          Length = 1344

 Score = 23.0 bits (47), Expect = 9.0
 Identities = 9/25 (36%), Positives = 15/25 (60%)
 Frame = -1

Query: 382 THTCYEHKMCVQNLQQLAEFVVLTL 308
           ++ C EH++CV  + Q   F  +TL
Sbjct: 199 SYACPEHELCVGRIAQELGFQHVTL 223


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 765,966
Number of Sequences: 2352
Number of extensions: 16743
Number of successful extensions: 28
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 68995575
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)