Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060965.seq
         (691 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicas...    50   1e-08
AJ850290-1|CAH64510.1|  533|Tribolium castaneum putative esteras...    22   4.1  
AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    22   5.4  
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    22   5.4  
AY769607-1|AAV40983.1|  196|Tribolium castaneum heat shock cogna...    21   7.2  
AY769606-1|AAV40982.1|  196|Tribolium castaneum heat shock prote...    21   7.2  
AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory recept...    21   7.2  
AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory recept...    21   7.2  
U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse ...    21   9.5  

>AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicase
           protein.
          Length = 580

 Score = 50.4 bits (115), Expect = 1e-08
 Identities = 25/70 (35%), Positives = 39/70 (55%)
 Frame = +3

Query: 351 EVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKN*LA*PQT 530
           EV V+G +   PI  FE +    ++ + VK  GY +PT IQ    P+ +SG++ ++  QT
Sbjct: 145 EVKVTGNDAPPPITSFETSGLRPHLLENVKKSGYTKPTAIQKYAIPVILSGRDLMSCAQT 204

Query: 531 GSGQNVGLHL 560
           GSG+     L
Sbjct: 205 GSGKTAAFML 214


>AJ850290-1|CAH64510.1|  533|Tribolium castaneum putative esterase
           protein.
          Length = 533

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = +3

Query: 9   DPASERIHSLNKHLQLNPKN 68
           DP SER+    + L++NP N
Sbjct: 512 DPDSERMAFWQRILKINPNN 531


>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 21.8 bits (44), Expect = 5.4
 Identities = 8/22 (36%), Positives = 12/22 (54%)
 Frame = -2

Query: 588 LVIYVHNCWQDVGQRFDRNPFV 523
           + ++ H  WQ   Q +D  PFV
Sbjct: 197 VTLHWHGVWQRGSQYYDGVPFV 218


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 21.8 bits (44), Expect = 5.4
 Identities = 8/22 (36%), Positives = 12/22 (54%)
 Frame = -2

Query: 588 LVIYVHNCWQDVGQRFDRNPFV 523
           + ++ H  WQ   Q +D  PFV
Sbjct: 197 VTLHWHGVWQRGSQYYDGVPFV 218


>AY769607-1|AAV40983.1|  196|Tribolium castaneum heat shock cognate
           70 protein.
          Length = 196

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 10/53 (18%), Positives = 23/53 (43%)
 Frame = -2

Query: 201 TKASRSSKSIATVAKPRRIIAEFVASSKFGTTVSTAIIPVTRHDYFSDLVEDV 43
           T+  R+ +++++  +    I        + TT++ A       DYF   ++ V
Sbjct: 93  TQCERAKRTLSSATQASIEIDSLFDGIDYSTTITRARFEDINMDYFKKCIDPV 145


>AY769606-1|AAV40982.1|  196|Tribolium castaneum heat shock protein
           70 protein.
          Length = 196

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 10/53 (18%), Positives = 23/53 (43%)
 Frame = -2

Query: 201 TKASRSSKSIATVAKPRRIIAEFVASSKFGTTVSTAIIPVTRHDYFSDLVEDV 43
           T+  R+ +++++  +    I        + TT++ A       DYF   ++ V
Sbjct: 93  TQCERAKRTLSSATQASIEIDSLFDGIDYSTTITRARFEDINMDYFKKCIDPV 145


>AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory
          receptor candidate 50 protein.
          Length = 350

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = -2

Query: 96 AIIPVTRHDYFSDLVEDVYL 37
          A++PV +H     LV  VYL
Sbjct: 18 ALLPVKKHHRLEKLVPCVYL 37


>AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory receptor
           candidate 42 protein.
          Length = 347

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 10/31 (32%), Positives = 14/31 (45%)
 Frame = +3

Query: 549 GLHLASNCAHK*PTAYSER*WSDCFGLGXYQ 641
           G  LA N  +     YS   W+D  G G ++
Sbjct: 113 GRFLAPNLTYLLVALYSGYVWTDILGFGYFR 143


>U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse
           transcriptase andRNase H protein.
          Length = 712

 Score = 21.0 bits (42), Expect = 9.5
 Identities = 10/28 (35%), Positives = 14/28 (50%)
 Frame = -2

Query: 99  TAIIPVTRHDYFSDLVEDVYLNYGFFLT 16
           T  IP    DY  DLV  + +N+   +T
Sbjct: 215 TTEIPPEPEDYVEDLVGHIEVNHSAPIT 242


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 151,375
Number of Sequences: 336
Number of extensions: 3336
Number of successful extensions: 9
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18114270
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)