Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060965.seq
(691 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical pr... 71 1e-12
Z81449-4|CAB03765.1| 811|Caenorhabditis elegans Hypothetical pr... 67 1e-11
U13070-1|AAK67224.1| 730|Caenorhabditis elegans Hypothetical pr... 66 2e-11
AF045641-1|AAK68386.1| 970|Caenorhabditis elegans Hypothetical ... 57 1e-08
AC024859-14|AAY43989.1| 643|Caenorhabditis elegans Hypothetical... 52 4e-07
AC024810-3|AAU20831.1| 660|Caenorhabditis elegans Vasa- and bel... 51 9e-07
AC024810-2|AAK68520.1| 644|Caenorhabditis elegans Vasa- and bel... 51 9e-07
AC024810-1|AAF60764.1| 641|Caenorhabditis elegans Vasa- and bel... 51 9e-07
AL034488-3|CAA22456.1| 504|Caenorhabditis elegans Hypothetical ... 48 8e-06
AC006665-5|AAF39907.1| 630|Caenorhabditis elegans Hypothetical ... 46 3e-05
AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA ... 44 1e-04
AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line hel... 44 1e-04
U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase pr... 44 1e-04
L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase pr... 44 1e-04
AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line hel... 44 1e-04
AC025726-23|AAK73934.1| 763|Caenorhabditis elegans Hypothetical... 40 0.002
U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein. 39 0.004
U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GL... 39 0.004
AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line he... 39 0.004
AC024876-4|AAU05555.1| 825|Caenorhabditis elegans Hypothetical ... 37 0.012
AC024876-3|AAU05556.1| 871|Caenorhabditis elegans Hypothetical ... 37 0.012
Z75546-3|CAA99891.1| 581|Caenorhabditis elegans Hypothetical pr... 36 0.027
U80447-1|AAB37806.1| 746|Caenorhabditis elegans Hypothetical pr... 31 0.59
AC091124-2|AAK27879.2| 1114|Caenorhabditis elegans Hypothetical ... 31 0.59
AC006714-20|AAK29723.2| 281|Caenorhabditis elegans Serpentine r... 31 0.59
AC006714-16|AAK29721.3| 281|Caenorhabditis elegans Serpentine r... 31 0.59
AC006661-5|AAF39890.2| 488|Caenorhabditis elegans Hypothetical ... 31 0.78
AC006661-4|ABB88208.1| 561|Caenorhabditis elegans Hypothetical ... 31 0.78
Z12116-1|CAA78102.1| 402|Caenorhabditis elegans protein ( C.ele... 30 1.8
U93847-1|AAB58269.1| 760|Caenorhabditis elegans elongation fact... 30 1.8
U93846-1|AAB58268.1| 768|Caenorhabditis elegans elongation fact... 30 1.8
U13876-3|AAA21170.1| 402|Caenorhabditis elegans Initiation fact... 30 1.8
U10414-7|AAN63383.1| 768|Caenorhabditis elegans Elongation fact... 30 1.8
U10414-6|AAN63384.1| 760|Caenorhabditis elegans Elongation fact... 30 1.8
EU051652-1|ABS85191.1| 973|Caenorhabditis elegans MEL-46 protein. 29 2.4
CU457744-1|CAM36366.2| 973|Caenorhabditis elegans Hypothetical ... 29 2.4
AC006605-1|AAK85443.1| 430|Caenorhabditis elegans Conserved ger... 29 2.4
Z29115-1|CAA82362.1| 489|Caenorhabditis elegans Hypothetical pr... 29 3.1
AF079508-1|AAC28387.1| 1156|Caenorhabditis elegans germline RNA ... 29 3.1
AF039718-2|AAB96745.2| 1156|Caenorhabditis elegans Germ-line hel... 29 3.1
Z68220-9|CAL64002.1| 312|Caenorhabditis elegans Hypothetical pr... 29 4.1
Z68220-8|CAA92487.1| 221|Caenorhabditis elegans Hypothetical pr... 29 4.1
AF067608-1|AAC17654.2| 544|Caenorhabditis elegans Hypothetical ... 29 4.1
AC024753-1|AAF60456.1| 732|Caenorhabditis elegans Hypothetical ... 28 5.5
Z81103-2|CAB03213.1| 403|Caenorhabditis elegans Hypothetical pr... 28 7.2
Z81103-1|CAB03208.2| 457|Caenorhabditis elegans Hypothetical pr... 28 7.2
Z99710-10|CAN99659.1| 222|Caenorhabditis elegans Hypothetical p... 27 9.6
>Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical
protein F58E10.3a protein.
Length = 561
Score = 70.5 bits (165), Expect = 1e-12
Identities = 34/101 (33%), Positives = 61/101 (60%)
Frame = +3
Query: 258 SLQPFNKNFYDPHPTVLKRSPYEVEEYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGV 437
+L P K+FY + V +R YE++++ + ++VT+ G V P+ F EA P + + +
Sbjct: 86 NLTPIEKDFYHENAAVSRREQYEIDQWVSANQVTLEGRGVPRPVFEFNEAPLPGQIHE-L 144
Query: 438 KTMGYKEPTPIQAQGWPIAMSGKN*LA*PQTGSGQNVGLHL 560
+++PT IQ+ WPIAMSG++ ++ +TGSG+ + L
Sbjct: 145 LYGKFQKPTVIQSISWPIAMSGRDIISIAKTGSGKTLAFML 185
Score = 61.7 bits (143), Expect = 5e-10
Identities = 28/47 (59%), Positives = 36/47 (76%)
Frame = +1
Query: 541 KTLAYILPAIVHINNQPPIRRGDGPIALVLAXTRXLAQQIQQVAADF 681
KTLA++LPA+VHI Q +RG+GP LVL TR LAQQ+Q+V+ DF
Sbjct: 179 KTLAFMLPALVHITKQAHRQRGEGPAVLVLLPTRELAQQVQEVSIDF 225
>Z81449-4|CAB03765.1| 811|Caenorhabditis elegans Hypothetical
protein C46F11.4 protein.
Length = 811
Score = 66.9 bits (156), Expect = 1e-11
Identities = 31/96 (32%), Positives = 53/96 (55%)
Frame = +3
Query: 255 VSLQPFNKNFYDPHPTVLKRSPYEVEEYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQG 434
+ Q FNKNFY+ H + + +V +N + V G++ P+ F +F + +
Sbjct: 220 IQYQKFNKNFYEEHEDIKRLHYMDVIRLQNTMNLRVGGLKPPRPVCSFAHFSFDKLLMEA 279
Query: 435 VKTMGYKEPTPIQAQGWPIAMSGKN*LA*PQTGSGQ 542
++ Y++PTPIQA P A+SG++ L +TGSG+
Sbjct: 280 IRKSEYEQPTPIQAMAIPSALSGRDVLGIAKTGSGK 315
Score = 54.8 bits (126), Expect = 6e-08
Identities = 24/47 (51%), Positives = 34/47 (72%)
Frame = +1
Query: 541 KTLAYILPAIVHINNQPPIRRGDGPIALVLAXTRXLAQQIQQVAADF 681
KT AY+ PAIVHI +QP ++ G+GP+A+++ TR LA Q+ Q A F
Sbjct: 315 KTAAYLWPAIVHIMDQPDLKAGEGPVAVIVVPTRELAIQVFQEAKKF 361
>U13070-1|AAK67224.1| 730|Caenorhabditis elegans Hypothetical
protein F01F1.7 protein.
Length = 730
Score = 66.1 bits (154), Expect = 2e-11
Identities = 30/75 (40%), Positives = 44/75 (58%)
Frame = +3
Query: 336 YRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKN*L 515
+R +++ G V P++ +EEA FPD V Q VK +GY EPTPIQ Q PI + ++ +
Sbjct: 283 FREDFNISIKGGRVPRPLRNWEEAGFPDEVYQAVKEIGYLEPTPIQRQAIPIGLQNRDVI 342
Query: 516 A*PQTGSGQNVGLHL 560
+TGSG+ L
Sbjct: 343 GVAETGSGKTAAFLL 357
Score = 43.6 bits (98), Expect = 1e-04
Identities = 22/52 (42%), Positives = 33/52 (63%), Gaps = 4/52 (7%)
Frame = +1
Query: 541 KTLAYILPAIVHINNQPPIRRGD----GPIALVLAXTRXLAQQIQQVAADFG 684
KT A++LP +V I + P + R + GP A+++A TR LAQQI++ FG
Sbjct: 351 KTAAFLLPLLVWITSLPKMERQEHRDLGPYAIIMAPTRELAQQIEEETNKFG 402
>AF045641-1|AAK68386.1| 970|Caenorhabditis elegans Hypothetical
protein F53H1.1 protein.
Length = 970
Score = 56.8 bits (131), Expect = 1e-08
Identities = 32/103 (31%), Positives = 54/103 (52%), Gaps = 1/103 (0%)
Frame = +3
Query: 255 VSLQPFNKNFYDPHPTVLKRSPYEVEEYRNKHE-VTVSGVEVHNPIQYFEEANFPDYVQQ 431
V + F KNFY + + + EV+ YR + + +TV G++ PI+ + + +
Sbjct: 258 VYYRKFKKNFYIETEEIRRMTKAEVKAYREELDSITVKGIDCPKPIKTWAQCGVNLKMMN 317
Query: 432 GVKTMGYKEPTPIQAQGWPIAMSGKN*LA*PQTGSGQNVGLHL 560
+K Y +PT IQAQ P MSG++ + +TGSG+ + L
Sbjct: 318 VLKKFEYSKPTSIQAQAIPSIMSGRDVIGIAKTGSGKTLAFLL 360
Score = 53.6 bits (123), Expect = 1e-07
Identities = 25/47 (53%), Positives = 32/47 (68%)
Frame = +1
Query: 541 KTLAYILPAIVHINNQPPIRRGDGPIALVLAXTRXLAQQIQQVAADF 681
KTLA++LP HI +QP + GDGPIA++LA TR LA Q + A F
Sbjct: 354 KTLAFLLPMFRHILDQPELEEGDGPIAVILAPTRELAMQTYKEANKF 400
>AC024859-14|AAY43989.1| 643|Caenorhabditis elegans Hypothetical
protein Y71H2AM.19 protein.
Length = 643
Score = 52.0 bits (119), Expect = 4e-07
Identities = 21/63 (33%), Positives = 37/63 (58%)
Frame = +3
Query: 354 VTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKN*LA*PQTG 533
V +G +V PI F + + +++++ +KT GY PTP+Q P G++ ++ QTG
Sbjct: 154 VEATGDDVPQPISLFSDLSLHEWIEENIKTAGYDRPTPVQKYSIPALQGGRDLMSCAQTG 213
Query: 534 SGQ 542
SG+
Sbjct: 214 SGK 216
>AC024810-3|AAU20831.1| 660|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform c protein.
Length = 660
Score = 50.8 bits (116), Expect = 9e-07
Identities = 27/77 (35%), Positives = 41/77 (53%)
Frame = +3
Query: 330 EEYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKN 509
++Y N V VSG V I++F EA F V + V GY +PTP+Q P ++ ++
Sbjct: 120 DKYENI-PVEVSGDSVPAAIEHFNEAGFGPAVMENVNRSGYSKPTPVQKHSIPTLLANRD 178
Query: 510 *LA*PQTGSGQNVGLHL 560
++ QTGSG+ L
Sbjct: 179 LMSCAQTGSGKTAAFLL 195
>AC024810-2|AAK68520.1| 644|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform b protein.
Length = 644
Score = 50.8 bits (116), Expect = 9e-07
Identities = 27/77 (35%), Positives = 41/77 (53%)
Frame = +3
Query: 330 EEYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKN 509
++Y N V VSG V I++F EA F V + V GY +PTP+Q P ++ ++
Sbjct: 104 DKYENI-PVEVSGDSVPAAIEHFNEAGFGPAVMENVNRSGYSKPTPVQKHSIPTLLANRD 162
Query: 510 *LA*PQTGSGQNVGLHL 560
++ QTGSG+ L
Sbjct: 163 LMSCAQTGSGKTAAFLL 179
>AC024810-1|AAF60764.1| 641|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform a protein.
Length = 641
Score = 50.8 bits (116), Expect = 9e-07
Identities = 27/77 (35%), Positives = 41/77 (53%)
Frame = +3
Query: 330 EEYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKN 509
++Y N V VSG V I++F EA F V + V GY +PTP+Q P ++ ++
Sbjct: 101 DKYENI-PVEVSGDSVPAAIEHFNEAGFGPAVMENVNRSGYSKPTPVQKHSIPTLLANRD 159
Query: 510 *LA*PQTGSGQNVGLHL 560
++ QTGSG+ L
Sbjct: 160 LMSCAQTGSGKTAAFLL 176
>AL034488-3|CAA22456.1| 504|Caenorhabditis elegans Hypothetical
protein Y54G11A.3 protein.
Length = 504
Score = 47.6 bits (108), Expect = 8e-06
Identities = 23/67 (34%), Positives = 42/67 (62%), Gaps = 1/67 (1%)
Frame = +3
Query: 363 SGVEVHNPIQYFEEANFPDYVQQG-VKTMGYKEPTPIQAQGWPIAMSGKN*LA*PQTGSG 539
S V++ P+ FE+A + G ++ G+++P+PIQ+Q WP+ +SG++ + QTGSG
Sbjct: 74 STVKIPPPVNSFEQAFGSNASIMGEIRKNGFEKPSPIQSQMWPLLLSGQDCIGVSQTGSG 133
Query: 540 QNVGLHL 560
+ + L
Sbjct: 134 KTLAFLL 140
Score = 37.9 bits (84), Expect = 0.007
Identities = 22/47 (46%), Positives = 30/47 (63%), Gaps = 6/47 (12%)
Frame = +1
Query: 541 KTLAYILPAIVHINNQ-PPIRRGD-----GPIALVLAXTRXLAQQIQ 663
KTLA++LPA++HI+ Q + D P LVL+ TR LAQQI+
Sbjct: 134 KTLAFLLPALLHIDAQLAQYEKNDEEQKPSPFVLVLSPTRELAQQIE 180
>AC006665-5|AAF39907.1| 630|Caenorhabditis elegans Hypothetical
protein H27M09.1 protein.
Length = 630
Score = 46.0 bits (104), Expect = 3e-05
Identities = 27/87 (31%), Positives = 45/87 (51%), Gaps = 1/87 (1%)
Frame = +3
Query: 291 PHPTVLKRSPYEVEEYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGV-KTMGYKEPTP 467
P + ++S + E R + ++ G + PI F E FP + + + K G PT
Sbjct: 156 PPGHIRRQSQEDYEIQRKRLGISCEGDHIPPPIGSFLEMKFPKSLLEFMQKQKGIVTPTA 215
Query: 468 IQAQGWPIAMSGKN*LA*PQTGSGQNV 548
IQ QG P+A+SG++ + TGSG+ +
Sbjct: 216 IQIQGIPVALSGRDMIGIASTGSGKTM 242
>AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA
helicase-3 protein.
Length = 720
Score = 44.0 bits (99), Expect = 1e-04
Identities = 21/59 (35%), Positives = 32/59 (54%)
Frame = +3
Query: 384 PIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKN*LA*PQTGSGQNVGLHL 560
P + F +++ P +++ V+ GY TPIQ P+ GK+ LA QTGSG+ L
Sbjct: 296 PCKSFSDSDIPQSMRRNVERAGYTRTTPIQQYTLPLVADGKDILACAQTGSGKTAAFLL 354
>AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line
helicase protein 3 protein.
Length = 720
Score = 44.0 bits (99), Expect = 1e-04
Identities = 21/59 (35%), Positives = 32/59 (54%)
Frame = +3
Query: 384 PIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKN*LA*PQTGSGQNVGLHL 560
P + F +++ P +++ V+ GY TPIQ P+ GK+ LA QTGSG+ L
Sbjct: 296 PCKSFSDSDIPQSMRRNVERAGYTRTTPIQQYTLPLVADGKDILACAQTGSGKTAAFLL 354
>U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 43.6 bits (98), Expect = 1e-04
Identities = 22/59 (37%), Positives = 31/59 (52%)
Frame = +3
Query: 384 PIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKN*LA*PQTGSGQNVGLHL 560
P + F EAN + +Q+ V GY + TPIQ P+ G + +A QTGSG+ L
Sbjct: 339 PCKTFAEANLTETMQKNVAHAGYSKTTPIQQYALPLVHQGYDIMACAQTGSGKTAAFLL 397
>L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 43.6 bits (98), Expect = 1e-04
Identities = 22/59 (37%), Positives = 31/59 (52%)
Frame = +3
Query: 384 PIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKN*LA*PQTGSGQNVGLHL 560
P + F EAN + +Q+ V GY + TPIQ P+ G + +A QTGSG+ L
Sbjct: 339 PCKTFAEANLTETMQKNVAHAGYSKTTPIQQYALPLVHQGYDIMACAQTGSGKTAAFLL 397
>AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line
helicase protein 1 protein.
Length = 763
Score = 43.6 bits (98), Expect = 1e-04
Identities = 22/59 (37%), Positives = 31/59 (52%)
Frame = +3
Query: 384 PIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKN*LA*PQTGSGQNVGLHL 560
P + F EAN + +Q+ V GY + TPIQ P+ G + +A QTGSG+ L
Sbjct: 339 PCKTFAEANLTETMQKNVAHAGYSKTTPIQQYALPLVHQGYDIMACAQTGSGKTAAFLL 397
>AC025726-23|AAK73934.1| 763|Caenorhabditis elegans Hypothetical
protein Y71G12B.8 protein.
Length = 763
Score = 39.9 bits (89), Expect = 0.002
Identities = 19/55 (34%), Positives = 29/55 (52%)
Frame = +3
Query: 396 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKN*LA*PQTGSGQNVGLHL 560
FE+ N + + GY +PTPIQ P+A++GK+ A TG+G+ L
Sbjct: 150 FEQMNLSRQILKACSGAGYSDPTPIQQACIPVALTGKDICACAATGTGKTAAFVL 204
>U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein.
Length = 974
Score = 38.7 bits (86), Expect = 0.004
Identities = 20/55 (36%), Positives = 29/55 (52%)
Frame = +3
Query: 396 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKN*LA*PQTGSGQNVGLHL 560
F EAN + +++ V GY + TPIQ P+ G + +A QTGSG+ L
Sbjct: 554 FSEANLGETMKKNVAHAGYTKTTPIQQYTLPLIHQGHDIMACAQTGSGKTAAFLL 608
>U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GLH-2
protein.
Length = 974
Score = 38.7 bits (86), Expect = 0.004
Identities = 20/55 (36%), Positives = 29/55 (52%)
Frame = +3
Query: 396 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKN*LA*PQTGSGQNVGLHL 560
F EAN + +++ V GY + TPIQ P+ G + +A QTGSG+ L
Sbjct: 554 FSEANLGETMKKNVAHAGYTKTTPIQQYTLPLIHQGHDIMACAQTGSGKTAAFLL 608
>AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line
helicase protein 2 protein.
Length = 974
Score = 38.7 bits (86), Expect = 0.004
Identities = 20/55 (36%), Positives = 29/55 (52%)
Frame = +3
Query: 396 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKN*LA*PQTGSGQNVGLHL 560
F EAN + +++ V GY + TPIQ P+ G + +A QTGSG+ L
Sbjct: 554 FSEANLGETMKKNVAHAGYTKTTPIQQYTLPLIHQGHDIMACAQTGSGKTAAFLL 608
>AC024876-4|AAU05555.1| 825|Caenorhabditis elegans Hypothetical
protein Y94H6A.5a protein.
Length = 825
Score = 37.1 bits (82), Expect = 0.012
Identities = 17/55 (30%), Positives = 30/55 (54%)
Frame = +3
Query: 378 HNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKN*LA*PQTGSGQ 542
H +++ V + ++ G+ +PTPIQ + P M GK+ +A +TGSG+
Sbjct: 20 HKKAGGWQQIGLDHSVYKAIEKKGFNQPTPIQRKTIPCIMDGKDVVAMSRTGSGK 74
>AC024876-3|AAU05556.1| 871|Caenorhabditis elegans Hypothetical
protein Y94H6A.5b protein.
Length = 871
Score = 37.1 bits (82), Expect = 0.012
Identities = 17/55 (30%), Positives = 30/55 (54%)
Frame = +3
Query: 378 HNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKN*LA*PQTGSGQ 542
H +++ V + ++ G+ +PTPIQ + P M GK+ +A +TGSG+
Sbjct: 20 HKKAGGWQQIGLDHSVYKAIEKKGFNQPTPIQRKTIPCIMDGKDVVAMSRTGSGK 74
>Z75546-3|CAA99891.1| 581|Caenorhabditis elegans Hypothetical
protein R05D11.4 protein.
Length = 581
Score = 35.9 bits (79), Expect = 0.027
Identities = 22/86 (25%), Positives = 39/86 (45%)
Frame = +3
Query: 303 VLKRSPYEVEEYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQG 482
V KR +++ R + + G + N I F +++ + + ++P+PIQ Q
Sbjct: 97 VEKRMQKLLDDIRRTNRIFTWGDHLPNIILRFSDSSMSPSLLNRLSENSIRQPSPIQMQS 156
Query: 483 WPIAMSGKN*LA*PQTGSGQNVGLHL 560
P +N LA TGSG+ + L
Sbjct: 157 IPFMTERRNVLASAPTGSGKTLAFAL 182
>U80447-1|AAB37806.1| 746|Caenorhabditis elegans Hypothetical
protein F55F8.2a protein.
Length = 746
Score = 31.5 bits (68), Expect = 0.59
Identities = 16/46 (34%), Positives = 28/46 (60%), Gaps = 1/46 (2%)
Frame = +3
Query: 414 PDYVQQGVKTMGYKEPTPIQAQGWPIAMSGK-N*LA*PQTGSGQNV 548
P+ V + ++ MG+ EPT IQ+ P A+ + + L +TGSG+ +
Sbjct: 163 PNEVLEAIEQMGFSEPTEIQSAVLPAAVRDRQDVLGAAETGSGKTL 208
>AC091124-2|AAK27879.2| 1114|Caenorhabditis elegans Hypothetical
protein Y47A7.1 protein.
Length = 1114
Score = 31.5 bits (68), Expect = 0.59
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = +3
Query: 3 ARDPASERIHSLNKHLQLNPKNNHVW 80
A PAS ++H L++ LQLN N+ W
Sbjct: 770 AEQPASHQLHCLSRALQLNKANDSAW 795
>AC006714-20|AAK29723.2| 281|Caenorhabditis elegans Serpentine
receptor, class z protein9 protein.
Length = 281
Score = 31.5 bits (68), Expect = 0.59
Identities = 19/76 (25%), Positives = 40/76 (52%), Gaps = 3/76 (3%)
Frame = -3
Query: 545 VLTGTRLWLRQLILX---RHSYRPALSLNGRRFFVTHCLYTLLHIIRKICFFKVLNRIMN 375
+++G L++ +IL R +YR N + + + Y + +I + F + + ++N
Sbjct: 11 LISGVFLFIANIILFLVYRKAYRFNSERNTATYPIVNSFYKKVALINALYFIESILIVVN 70
Query: 374 LNATYSYLVFISILFD 327
LN T +L I+I+F+
Sbjct: 71 LNVTNEWLNKIAIIFN 86
>AC006714-16|AAK29721.3| 281|Caenorhabditis elegans Serpentine
receptor, class z protein8 protein.
Length = 281
Score = 31.5 bits (68), Expect = 0.59
Identities = 19/76 (25%), Positives = 40/76 (52%), Gaps = 3/76 (3%)
Frame = -3
Query: 545 VLTGTRLWLRQLILX---RHSYRPALSLNGRRFFVTHCLYTLLHIIRKICFFKVLNRIMN 375
+++G L++ +IL R +YR N + + + Y + +I + F + + ++N
Sbjct: 11 LISGVFLFIANIILFLVYRKAYRFNSERNTATYPIVNSFYKKVALINALYFIESILIVVN 70
Query: 374 LNATYSYLVFISILFD 327
LN T +L I+I+F+
Sbjct: 71 LNVTNEWLNKIAIIFN 86
>AC006661-5|AAF39890.2| 488|Caenorhabditis elegans Hypothetical
protein H20J04.4a protein.
Length = 488
Score = 31.1 bits (67), Expect = 0.78
Identities = 15/51 (29%), Positives = 27/51 (52%)
Frame = +3
Query: 396 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKN*LA*PQTGSGQNV 548
F + ++ Q ++TM K TP+QA P + G + L +TG+G+ +
Sbjct: 91 FSQLGVCSWITQQLQTMQIKTATPVQAACIPKILEGSDILGCARTGTGKTL 141
>AC006661-4|ABB88208.1| 561|Caenorhabditis elegans Hypothetical
protein H20J04.4b protein.
Length = 561
Score = 31.1 bits (67), Expect = 0.78
Identities = 15/51 (29%), Positives = 27/51 (52%)
Frame = +3
Query: 396 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKN*LA*PQTGSGQNV 548
F + ++ Q ++TM K TP+QA P + G + L +TG+G+ +
Sbjct: 91 FSQLGVCSWITQQLQTMQIKTATPVQAACIPKILEGSDILGCARTGTGKTL 141
>Z12116-1|CAA78102.1| 402|Caenorhabditis elegans protein (
C.elegans mRNA for eIF-4A homologue. ).
Length = 402
Score = 29.9 bits (64), Expect = 1.8
Identities = 12/52 (23%), Positives = 31/52 (59%)
Frame = +3
Query: 387 IQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKN*LA*PQTGSGQ 542
++ F++ + + +G+ G+++P+ IQ + +GK+ +A Q+G+G+
Sbjct: 28 VESFDDMELKEELLRGIYGFGFEKPSAIQKRAIVPCTTGKDVIAQAQSGTGK 79
Score = 29.5 bits (63), Expect = 2.4
Identities = 14/24 (58%), Positives = 18/24 (75%)
Frame = +1
Query: 619 ALVLAXTRXLAQQIQQVAADFGTH 690
ALV+A TR LAQQIQ+V + G +
Sbjct: 100 ALVMAPTRELAQQIQKVMSALGEY 123
>U93847-1|AAB58269.1| 760|Caenorhabditis elegans elongation
factor-2 kinase EFK-1B isoform protein.
Length = 760
Score = 29.9 bits (64), Expect = 1.8
Identities = 20/86 (23%), Positives = 37/86 (43%)
Frame = -2
Query: 270 KVGVKRIPXWASHVLPSREXFXPTKASRSSKSIATVAKPRRIIAEFVASSKFGTTVSTAI 91
++G K + +H + + P + + KSI + E S G T ++
Sbjct: 639 EMGDKGAMLYMAHAYETGQHLGPNRRTDYKKSIDWYQRVVGFQEEEELDSDCGKTTFSSF 698
Query: 90 IPVTRHDYFSDLVEDVYLNYGFFLTQ 13
P+TRH+ + + E +Y G+ L Q
Sbjct: 699 APLTRHEILAKMAE-MYKEGGYGLNQ 723
>U93846-1|AAB58268.1| 768|Caenorhabditis elegans elongation
factor-2 kinase EFK-1A isoform protein.
Length = 768
Score = 29.9 bits (64), Expect = 1.8
Identities = 20/86 (23%), Positives = 37/86 (43%)
Frame = -2
Query: 270 KVGVKRIPXWASHVLPSREXFXPTKASRSSKSIATVAKPRRIIAEFVASSKFGTTVSTAI 91
++G K + +H + + P + + KSI + E S G T ++
Sbjct: 647 EMGDKGAMLYMAHAYETGQHLGPNRRTDYKKSIDWYQRVVGFQEEEELDSDCGKTTFSSF 706
Query: 90 IPVTRHDYFSDLVEDVYLNYGFFLTQ 13
P+TRH+ + + E +Y G+ L Q
Sbjct: 707 APLTRHEILAKMAE-MYKEGGYGLNQ 731
>U13876-3|AAA21170.1| 402|Caenorhabditis elegans Initiation factor
protein 1, isoforma protein.
Length = 402
Score = 29.9 bits (64), Expect = 1.8
Identities = 12/52 (23%), Positives = 31/52 (59%)
Frame = +3
Query: 387 IQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKN*LA*PQTGSGQ 542
++ F++ + + +G+ G+++P+ IQ + +GK+ +A Q+G+G+
Sbjct: 28 VESFDDMELKEELLRGIYGFGFEKPSAIQKRAIVPCTTGKDVIAQAQSGTGK 79
Score = 29.5 bits (63), Expect = 2.4
Identities = 14/24 (58%), Positives = 18/24 (75%)
Frame = +1
Query: 619 ALVLAXTRXLAQQIQQVAADFGTH 690
ALV+A TR LAQQIQ+V + G +
Sbjct: 100 ALVMAPTRELAQQIQKVMSALGEY 123
>U10414-7|AAN63383.1| 768|Caenorhabditis elegans Elongation factor
kinase protein1, isoform a protein.
Length = 768
Score = 29.9 bits (64), Expect = 1.8
Identities = 20/86 (23%), Positives = 37/86 (43%)
Frame = -2
Query: 270 KVGVKRIPXWASHVLPSREXFXPTKASRSSKSIATVAKPRRIIAEFVASSKFGTTVSTAI 91
++G K + +H + + P + + KSI + E S G T ++
Sbjct: 647 EMGDKGAMLYMAHAYETGQHLGPNRRTDYKKSIDWYQRVVGFQEEEELDSDCGKTTFSSF 706
Query: 90 IPVTRHDYFSDLVEDVYLNYGFFLTQ 13
P+TRH+ + + E +Y G+ L Q
Sbjct: 707 APLTRHEILAKMAE-MYKEGGYGLNQ 731
>U10414-6|AAN63384.1| 760|Caenorhabditis elegans Elongation factor
kinase protein1, isoform b protein.
Length = 760
Score = 29.9 bits (64), Expect = 1.8
Identities = 20/86 (23%), Positives = 37/86 (43%)
Frame = -2
Query: 270 KVGVKRIPXWASHVLPSREXFXPTKASRSSKSIATVAKPRRIIAEFVASSKFGTTVSTAI 91
++G K + +H + + P + + KSI + E S G T ++
Sbjct: 639 EMGDKGAMLYMAHAYETGQHLGPNRRTDYKKSIDWYQRVVGFQEEEELDSDCGKTTFSSF 698
Query: 90 IPVTRHDYFSDLVEDVYLNYGFFLTQ 13
P+TRH+ + + E +Y G+ L Q
Sbjct: 699 APLTRHEILAKMAE-MYKEGGYGLNQ 723
>EU051652-1|ABS85191.1| 973|Caenorhabditis elegans MEL-46 protein.
Length = 973
Score = 29.5 bits (63), Expect = 2.4
Identities = 12/51 (23%), Positives = 27/51 (52%)
Frame = +3
Query: 396 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKN*LA*PQTGSGQNV 548
FE + +K + P+P+QA+ P+ + G++ L ++G+G+ +
Sbjct: 24 FESLMIGQKTLERLKNSQFDRPSPVQARAIPVGLLGRDMLVQAKSGTGKTL 74
>CU457744-1|CAM36366.2| 973|Caenorhabditis elegans Hypothetical
protein T06A10.1 protein.
Length = 973
Score = 29.5 bits (63), Expect = 2.4
Identities = 12/51 (23%), Positives = 27/51 (52%)
Frame = +3
Query: 396 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKN*LA*PQTGSGQNV 548
FE + +K + P+P+QA+ P+ + G++ L ++G+G+ +
Sbjct: 24 FESLMIGQKTLERLKNSQFDRPSPVQARAIPVGLLGRDMLVQAKSGTGKTL 74
>AC006605-1|AAK85443.1| 430|Caenorhabditis elegans Conserved
germline helicase protein1 protein.
Length = 430
Score = 29.5 bits (63), Expect = 2.4
Identities = 12/37 (32%), Positives = 25/37 (67%)
Frame = +3
Query: 432 GVKTMGYKEPTPIQAQGWPIAMSGKN*LA*PQTGSGQ 542
G+ G+++P+PIQ +A++G++ LA + G+G+
Sbjct: 57 GIFEKGWEKPSPIQEASIGVALTGQDILARAKNGTGK 93
>Z29115-1|CAA82362.1| 489|Caenorhabditis elegans Hypothetical
protein T26G10.1 protein.
Length = 489
Score = 29.1 bits (62), Expect = 3.1
Identities = 14/49 (28%), Positives = 25/49 (51%)
Frame = +3
Query: 396 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKN*LA*PQTGSGQ 542
F E + + +G+ +P+ IQ P A+ GK+ + +TGSG+
Sbjct: 46 FAELGVSQPLCDACQRLGWMKPSKIQQAALPHALQGKDVIGLAETGSGK 94
>AF079508-1|AAC28387.1| 1156|Caenorhabditis elegans germline RNA
helicase-4 protein.
Length = 1156
Score = 29.1 bits (62), Expect = 3.1
Identities = 18/72 (25%), Positives = 31/72 (43%)
Frame = +3
Query: 333 EYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKN* 512
++ K + VE+ + + P + +K M PTPIQ + M G +
Sbjct: 717 DFDQKVVASTGKVEIPDMASFDGFKILPQDLHDNLKRMKMNRPTPIQRASFFPIMHGNDV 776
Query: 513 LA*PQTGSGQNV 548
+A TGSG+ +
Sbjct: 777 VACAHTGSGKTL 788
>AF039718-2|AAB96745.2| 1156|Caenorhabditis elegans Germ-line
helicase protein 4 protein.
Length = 1156
Score = 29.1 bits (62), Expect = 3.1
Identities = 18/72 (25%), Positives = 31/72 (43%)
Frame = +3
Query: 333 EYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKN* 512
++ K + VE+ + + P + +K M PTPIQ + M G +
Sbjct: 717 DFDQKVVASTGKVEIPDMASFDGFKILPQDLHDNLKRMKMNRPTPIQRASFFPIMHGNDV 776
Query: 513 LA*PQTGSGQNV 548
+A TGSG+ +
Sbjct: 777 VACAHTGSGKTL 788
>Z68220-9|CAL64002.1| 312|Caenorhabditis elegans Hypothetical
protein T20D3.5b protein.
Length = 312
Score = 28.7 bits (61), Expect = 4.1
Identities = 11/24 (45%), Positives = 17/24 (70%)
Frame = -2
Query: 153 RRIIAEFVASSKFGTTVSTAIIPV 82
+++I +FVA S G T+STA P+
Sbjct: 220 QQLIGDFVAGSLLGATISTAFFPL 243
>Z68220-8|CAA92487.1| 221|Caenorhabditis elegans Hypothetical
protein T20D3.5a protein.
Length = 221
Score = 28.7 bits (61), Expect = 4.1
Identities = 11/24 (45%), Positives = 17/24 (70%)
Frame = -2
Query: 153 RRIIAEFVASSKFGTTVSTAIIPV 82
+++I +FVA S G T+STA P+
Sbjct: 129 QQLIGDFVAGSLLGATISTAFFPL 152
>AF067608-1|AAC17654.2| 544|Caenorhabditis elegans Hypothetical
protein B0511.6 protein.
Length = 544
Score = 28.7 bits (61), Expect = 4.1
Identities = 18/52 (34%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
Frame = +3
Query: 429 QGVKTMGYKEPTPIQAQGWPIAMSGKN*LA*PQTGSGQNVGLHL-ASNCAHK 581
+ V+ +G+ T IQA+ + GK+ LA +TGSG+ + L A HK
Sbjct: 81 KAVQGLGFTTMTEIQAKSIDPLLEGKDVLASAKTGSGKTLAFLLPAIELLHK 132
>AC024753-1|AAF60456.1| 732|Caenorhabditis elegans Hypothetical
protein Y23H5B.6 protein.
Length = 732
Score = 28.3 bits (60), Expect = 5.5
Identities = 13/42 (30%), Positives = 24/42 (57%)
Frame = +3
Query: 429 QGVKTMGYKEPTPIQAQGWPIAMSGKN*LA*PQTGSGQNVGL 554
+G+K Y +PT IQ +++G + + +TGSG+ + L
Sbjct: 89 EGLKDNDYTKPTEIQRDTIAYSLTGSDVVGAAKTGSGKTLAL 130
>Z81103-2|CAB03213.1| 403|Caenorhabditis elegans Hypothetical
protein M04G12.1b protein.
Length = 403
Score = 27.9 bits (59), Expect = 7.2
Identities = 17/56 (30%), Positives = 26/56 (46%), Gaps = 3/56 (5%)
Frame = +3
Query: 291 PHPTVLKRSPYEVEEYRNKHEVTVSGVEVHNPIQYFEEAN---FPDYVQQGVKTMG 449
P PTVL SP+ V N +V H + +AN D +QQ ++++G
Sbjct: 144 PQPTVLPTSPFHVPTMNNLEQVL-----THQRLLQMTQANPRAVDDLIQQSLRSLG 194
>Z81103-1|CAB03208.2| 457|Caenorhabditis elegans Hypothetical
protein M04G12.1a protein.
Length = 457
Score = 27.9 bits (59), Expect = 7.2
Identities = 17/56 (30%), Positives = 26/56 (46%), Gaps = 3/56 (5%)
Frame = +3
Query: 291 PHPTVLKRSPYEVEEYRNKHEVTVSGVEVHNPIQYFEEAN---FPDYVQQGVKTMG 449
P PTVL SP+ V N +V H + +AN D +QQ ++++G
Sbjct: 171 PQPTVLPTSPFHVPTMNNLEQVL-----THQRLLQMTQANPRAVDDLIQQSLRSLG 221
>Z99710-10|CAN99659.1| 222|Caenorhabditis elegans Hypothetical
protein F08A8.8 protein.
Length = 222
Score = 27.5 bits (58), Expect = 9.6
Identities = 16/39 (41%), Positives = 21/39 (53%)
Frame = +2
Query: 98 VETVVPNLEEATNSAIIRLGLATVAIDLEDLEALVGXXN 214
+ETV+ LE N +RL A VA E LE++ G N
Sbjct: 71 IETVILALEAGMNLEDVRLEFAHVATREEILESVFGKLN 109
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,552,305
Number of Sequences: 27780
Number of extensions: 303687
Number of successful extensions: 847
Number of sequences better than 10.0: 47
Number of HSP's better than 10.0 without gapping: 809
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 843
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1581836700
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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