BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= NV060964.seq (684 letters) Database: spombe 5004 sequences; 2,362,478 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SPBC25H2.12c |cct7||chaperonin-containing T-complex eta subunit ... 124 1e-29 SPBC106.06 |cct4||chaperonin-containing T-complex delta subunit ... 77 2e-15 SPBC1A4.08c |cct3||chaperonin-containing T-complex gamma subunit... 74 2e-14 SPAC1D4.04 |cct2||chaperonin-containing T-complex beta subunit C... 72 9e-14 SPBC12D12.03 |cct1||chaperonin-containing T-complex alpha subuni... 65 8e-12 SPBC337.05c |cct8||chaperonin-containing T-complex theta subunit... 64 2e-11 SPAC1420.02c |cct5||chaperonin-containing T-complex epsilon subu... 61 2e-10 SPBC646.11 |cct6||chaperonin-containing T-complex zeta subunit C... 52 8e-08 SPAC12G12.04 |hsp60|hsp60|mitochondrial heat shock protein Hsp60... 32 0.067 SPCC16A11.17 |cdc21|mcm4, SPCC24B10.01|MCM complex subunit Cdc21... 27 1.9 SPAC144.03 |ade2|min10, min3|adenylosuccinate synthetase Ade2|Sc... 27 3.3 SPBC530.02 |||membrane transporter|Schizosaccharomyces pombe|chr... 27 3.3 SPAC1250.01 |snf21|SPAC29A4.21|ATP-dependent DNA helicase Snf21|... 26 4.4 SPCC1620.14c |snf22|SPCC830.01c|ATP-dependent DNA helicase Snf22... 26 5.8 SPBC3E7.01 |fab1|ste12, SPBC6B1.11c|1-phosphatidylinositol-3-pho... 25 7.7 SPBC16H5.11c |skb1|rmt5|type II protein arginine N-methyltransfe... 25 7.7 SPAC1039.11c ||SPAC922.02c|alpha-glucosidase|Schizosaccharomyces... 25 7.7 SPBC1683.01 |||inorganic phosphate transporter |Schizosaccharomy... 25 7.7 >SPBC25H2.12c |cct7||chaperonin-containing T-complex eta subunit Cct7|Schizosaccharomyces pombe|chr 2|||Manual Length = 558 Score = 124 bits (299), Expect = 1e-29 Identities = 66/136 (48%), Positives = 85/136 (62%) Frame = +3 Query: 246 PCRKTLVDIAKSQDAEVGDGTTSVVILAGEILKRLKPFVEEGVHPRVLIRAVRTASRLAI 425 P KTLVDIA++QDAEVGDGTTSVV+ AGE+L+ + FVE+GV ++IR R A++LA+ Sbjct: 78 PAAKTLVDIARAQDAEVGDGTTSVVVFAGELLREARTFVEDGVSSHLIIRGYRKAAQLAV 137 Query: 426 EKIKEQAVKIDNKSPEEQRDLLLKCASTRCHRN*FINRRITSXXXXXXXXXXXXXHFLPL 605 KIKE A+ +D + RDLL KCAST + + L Sbjct: 138 NKIKEIAIHLDLSDEGKLRDLLTKCASTAMNSKLIRSNSTFFTKMVVDAVLTLDQEDLNE 197 Query: 606 DMIGIKKVPGGALEDS 653 +MIGIKKVPGGA+EDS Sbjct: 198 NMIGIKKVPGGAMEDS 213 Score = 111 bits (268), Expect = 7e-26 Identities = 52/77 (67%), Positives = 63/77 (81%) Frame = +1 Query: 34 QPQILLLREGTDQTQGKPQLVSNINACQLVVDAVRTTLGPRGMDKLIVDHNGKAVISNDG 213 Q +++L+EGTD +QG+ QL+SNINAC V D +RTTLGP G DKL+VD G+ VISNDG Sbjct: 7 QIPVIVLKEGTDDSQGRGQLLSNINACVAVQDTIRTTLGPLGADKLMVDDRGEVVISNDG 66 Query: 214 ATIMKLLDIVHPAARLL 264 ATIMKLLDIVHPAA+ L Sbjct: 67 ATIMKLLDIVHPAAKTL 83 >SPBC106.06 |cct4||chaperonin-containing T-complex delta subunit Cct4|Schizosaccharomyces pombe|chr 2|||Manual Length = 527 Score = 77.0 bits (181), Expect = 2e-15 Identities = 37/72 (51%), Positives = 53/72 (73%), Gaps = 2/72 (2%) Frame = +1 Query: 70 QTQGKPQLV--SNINACQLVVDAVRTTLGPRGMDKLIVDHNGKAVISNDGATIMKLLDIV 243 Q + KPQ V SNI A + V DA+RT+LGP+GMDK+I G+ +++NDGATI+K L ++ Sbjct: 12 QDREKPQEVRLSNIMAARSVADAIRTSLGPKGMDKMIQTGKGEVILTNDGATILKHLSVL 71 Query: 244 HPAARLLWTLQS 279 HPAA++L L + Sbjct: 72 HPAAKMLVDLSA 83 Score = 69.7 bits (163), Expect = 4e-13 Identities = 35/88 (39%), Positives = 56/88 (63%) Frame = +3 Query: 246 PCRKTLVDIAKSQDAEVGDGTTSVVILAGEILKRLKPFVEEGVHPRVLIRAVRTASRLAI 425 P K LVD++ +QD E GDGTTSVVILAG +L + +++G+HP V+ + + A+ + Sbjct: 73 PAAKMLVDLSAAQDVEAGDGTTSVVILAGSMLACAEKLLKKGIHPTVIAESFQRAAGFTV 132 Query: 426 EKIKEQAVKIDNKSPEEQRDLLLKCAST 509 + +KE A+ I+ R+ LL+ A+T Sbjct: 133 DCMKENALAIE----LSDRESLLRAATT 156 >SPBC1A4.08c |cct3||chaperonin-containing T-complex gamma subunit Cct3|Schizosaccharomyces pombe|chr 2|||Manual Length = 528 Score = 74.1 bits (174), Expect = 2e-14 Identities = 35/89 (39%), Positives = 55/89 (61%) Frame = +3 Query: 246 PCRKTLVDIAKSQDAEVGDGTTSVVILAGEILKRLKPFVEEGVHPRVLIRAVRTASRLAI 425 P K+++++A++QD EVGDGTTSV+ILAGEIL P ++ +HP V+IR+ + A A+ Sbjct: 73 PAAKSMIELARTQDEEVGDGTTSVIILAGEILAAASPLLDRKIHPVVMIRSFKQALEDAL 132 Query: 426 EKIKEQAVKIDNKSPEEQRDLLLKCASTR 512 I E + ++ E L+ C T+ Sbjct: 133 SIIDEITLPVNVDDNAEMFRLIRTCIGTK 161 Score = 64.1 bits (149), Expect = 2e-11 Identities = 27/76 (35%), Positives = 47/76 (61%) Frame = +1 Query: 31 MQPQILLLREGTDQTQGKPQLVSNINACQLVVDAVRTTLGPRGMDKLIVDHNGKAVISND 210 MQ + ++ ++ G +SNI A + V D +RT LGPR M K+++D G +++ND Sbjct: 1 MQSPVFVMNTNGNRQVGHKAQMSNIQAAKAVADVIRTCLGPRAMLKMLLDPVGSVLLTND 60 Query: 211 GATIMKLLDIVHPAAR 258 G I++ +++ HPAA+ Sbjct: 61 GHAILREIEVAHPAAK 76 >SPAC1D4.04 |cct2||chaperonin-containing T-complex beta subunit Cct2|Schizosaccharomyces pombe|chr 1|||Manual Length = 527 Score = 71.7 bits (168), Expect = 9e-14 Identities = 49/135 (36%), Positives = 70/135 (51%), Gaps = 1/135 (0%) Frame = +3 Query: 255 KTLVDIAKSQDAEVGDGTTSVVILAGEILKRLKPFVEEGVHPRVLIRAVRTASRLAIEKI 434 K LV+I+K QD EVGDGTTSV + A E+L++ + V +HP+V+I R A++ AI+ + Sbjct: 78 KVLVNISKVQDDEVGDGTTSVCVFAAELLRQAEIMVNAKIHPQVIIDGYRIATKTAIDAL 137 Query: 435 KEQAVKIDNKS-PEEQRDLLLKCASTRCHRN*FINRRITSXXXXXXXXXXXXXHFLPLDM 611 + A IDN S P + R L A T +++ LD Sbjct: 138 R--ASSIDNSSDPAKFRSDLENIARTTLSSK-ILSQNKNHFAQLAVDAVLRLKGSTNLDN 194 Query: 612 IGIKKVPGGALEDSF 656 I I K+ GG L+DSF Sbjct: 195 IQIIKILGGKLDDSF 209 Score = 53.6 bits (123), Expect = 3e-08 Identities = 27/80 (33%), Positives = 50/80 (62%), Gaps = 1/80 (1%) Frame = +1 Query: 49 LLREGTDQTQGKPQLVSNINACQLVVDAVRTTLGPRGMDKLIVDH-NGKAVISNDGATIM 225 + E Q +G+ +S+ V D V++TLGP+GMDK++ + +G V++NDGATI+ Sbjct: 8 IFNESGIQERGENARLSSFVGAIAVGDLVKSTLGPKGMDKILQSNSSGDIVVTNDGATIL 67 Query: 226 KLLDIVHPAARLLWTLQSLK 285 K + + + AA++L + ++ Sbjct: 68 KSIALDNAAAKVLVNISKVQ 87 >SPBC12D12.03 |cct1||chaperonin-containing T-complex alpha subunit Cct1|Schizosaccharomyces pombe|chr 2|||Manual Length = 556 Score = 65.3 bits (152), Expect = 8e-12 Identities = 30/61 (49%), Positives = 41/61 (67%) Frame = +3 Query: 246 PCRKTLVDIAKSQDAEVGDGTTSVVILAGEILKRLKPFVEEGVHPRVLIRAVRTASRLAI 425 P K LV++A+ QD EVGDGTTSVVI+A E+L+R V+ +HP +I R A R A+ Sbjct: 75 PAGKVLVELAQQQDKEVGDGTTSVVIIAAELLRRANELVKNKIHPTTIITGYRLAIREAV 134 Query: 426 E 428 + Sbjct: 135 K 135 Score = 62.9 bits (146), Expect = 4e-11 Identities = 26/66 (39%), Positives = 44/66 (66%) Frame = +1 Query: 67 DQTQGKPQLVSNINACQLVVDAVRTTLGPRGMDKLIVDHNGKAVISNDGATIMKLLDIVH 246 ++ G+ N+ A + + V+++LGP G+DK++VD G ++NDGATI+ LLD+ H Sbjct: 15 EKISGEDVRNQNVLATTAIANVVKSSLGPVGLDKMLVDDIGDVTVTNDGATILSLLDVEH 74 Query: 247 PAARLL 264 PA ++L Sbjct: 75 PAGKVL 80 Score = 35.1 bits (77), Expect = 0.010 Identities = 18/37 (48%), Positives = 23/37 (62%) Frame = +2 Query: 479 KRSPIEVCINAMSSKLIHQQKDHFSKIVVDAVLSLDT 589 K S I V +MSSK+I D FS + VDA+LS+ T Sbjct: 150 KESLINVAKTSMSSKIIGNDSDFFSTMAVDAMLSVKT 186 >SPBC337.05c |cct8||chaperonin-containing T-complex theta subunit Cct8 |Schizosaccharomyces pombe|chr 2|||Manual Length = 546 Score = 63.7 bits (148), Expect = 2e-11 Identities = 29/73 (39%), Positives = 50/73 (68%), Gaps = 1/73 (1%) Frame = +1 Query: 49 LLREGTDQTQG-KPQLVSNINACQLVVDAVRTTLGPRGMDKLIVDHNGKAVISNDGATIM 225 L REG QG + ++ N NA + + + RT+LGP G +K++V+H + ++ND ATI+ Sbjct: 13 LFREGYRIMQGVEDAVIRNCNAIRELSEITRTSLGPNGKNKIVVNHLQQTFLTNDAATII 72 Query: 226 KLLDIVHPAARLL 264 + L+++HPAA+L+ Sbjct: 73 RELEVIHPAAKLV 85 Score = 42.7 bits (96), Expect = 5e-05 Identities = 26/95 (27%), Positives = 48/95 (50%), Gaps = 2/95 (2%) Frame = +3 Query: 246 PCRKTLVDIAKSQDAEVGDGTTSVVILAGEILKRLKPFVEEGVHPRVLIRAVRTASRLAI 425 P K +VD + Q+ E+GD VV+ GE+L + + + G+ P + + A + Sbjct: 80 PAAKLVVDATQQQENELGDAANFVVVFTGELLAKAENMIRMGLTPLEIAKGYEMALSHTM 139 Query: 426 EKIKE-QAVKIDN-KSPEEQRDLLLKCASTRCHRN 524 E ++E A KI+ +S +E + C S++ + N Sbjct: 140 EVLEEICADKIETVESEKELIKAIRTCISSKQYGN 174 >SPAC1420.02c |cct5||chaperonin-containing T-complex epsilon subunit Cct5|Schizosaccharomyces pombe|chr 1|||Manual Length = 546 Score = 60.9 bits (141), Expect = 2e-10 Identities = 27/70 (38%), Positives = 47/70 (67%) Frame = +1 Query: 55 REGTDQTQGKPQLVSNINACQLVVDAVRTTLGPRGMDKLIVDHNGKAVISNDGATIMKLL 234 +E + G + S+I A + V + VRT+LGPRG+DK+++ +G+ ++NDGATI+ + Sbjct: 24 QEKKRRLHGIDAVKSHILATKTVANIVRTSLGPRGLDKILISPDGEITVTNDGATILDQM 83 Query: 235 DIVHPAARLL 264 ++ H A+LL Sbjct: 84 EVEHQIAKLL 93 Score = 60.5 bits (140), Expect = 2e-10 Identities = 29/78 (37%), Positives = 50/78 (64%) Frame = +3 Query: 255 KTLVDIAKSQDAEVGDGTTSVVILAGEILKRLKPFVEEGVHPRVLIRAVRTASRLAIEKI 434 K LV ++KSQD E+GDGTT VV+LAG +L++ + +++G+HP + A ++A++ + Sbjct: 91 KLLVQLSKSQDDEIGDGTTGVVVLAGALLEQAEALIDKGIHPIRIADGYEKACQVAVKHL 150 Query: 435 KEQAVKIDNKSPEEQRDL 488 + +D SPE +L Sbjct: 151 DAISDVVD-FSPENTTNL 167 Score = 30.7 bits (66), Expect = 0.20 Identities = 12/25 (48%), Positives = 19/25 (76%) Frame = +2 Query: 509 AMSSKLIHQQKDHFSKIVVDAVLSL 583 ++ SK++ + DHF+ I VDAVLS+ Sbjct: 174 SLGSKVVSKAHDHFANIAVDAVLSV 198 >SPBC646.11 |cct6||chaperonin-containing T-complex zeta subunit Cct6|Schizosaccharomyces pombe|chr 2|||Manual Length = 535 Score = 52.0 bits (119), Expect = 8e-08 Identities = 30/90 (33%), Positives = 48/90 (53%) Frame = +3 Query: 240 RSPCRKTLVDIAKSQDAEVGDGTTSVVILAGEILKRLKPFVEEGVHPRVLIRAVRTASRL 419 ++P + A +QD GDGTTSV +L GE+LK+ + ++ EG+HP ++ A Sbjct: 68 QNPTASCIAKAATAQDDATGDGTTSVCLLVGELLKQAELYIREGLHPSLISDGFNLAKNE 127 Query: 420 AIEKIKEQAVKIDNKSPEEQRDLLLKCAST 509 A+ + + K D E R++LL A T Sbjct: 128 ALTFL--DSFKTDF---EVDREVLLNVAKT 152 Score = 40.3 bits (90), Expect = 3e-04 Identities = 21/69 (30%), Positives = 35/69 (50%) Frame = +1 Query: 49 LLREGTDQTQGKPQLVSNINACQLVVDAVRTTLGPRGMDKLIVDHNGKAVISNDGATIMK 228 LL + Q L NI+A + D +++ LGP G K++VD G ++ DG ++ Sbjct: 4 LLNPKAESIQRAQALQVNISAAIGLQDVLKSNLGPTGTTKMLVDGAGAIKLTKDGKVLLT 63 Query: 229 LLDIVHPAA 255 + I +P A Sbjct: 64 EMQIQNPTA 72 >SPAC12G12.04 |hsp60|hsp60|mitochondrial heat shock protein Hsp60|Schizosaccharomyces pombe|chr 1|||Manual Length = 582 Score = 32.3 bits (70), Expect = 0.067 Identities = 22/70 (31%), Positives = 32/70 (45%) Frame = +3 Query: 267 DIAKSQDAEVGDGTTSVVILAGEILKRLKPFVEEGVHPRVLIRAVRTASRLAIEKIKEQA 446 D+A + GDGTT+ +L I V G +P L R ++ A +E + QA Sbjct: 107 DVASKTNEVAGDGTTTATVLTRAIFSETVRNVAAGCNPMDLRRGIQLAVDNVVEFL--QA 164 Query: 447 VKIDNKSPEE 476 K D + EE Sbjct: 165 NKRDITTSEE 174 Score = 30.3 bits (65), Expect = 0.27 Identities = 14/37 (37%), Positives = 21/37 (56%) Frame = +1 Query: 130 AVRTTLGPRGMDKLIVDHNGKAVISNDGATIMKLLDI 240 AV TLGP+G + LI G I+ DG T+ + + + Sbjct: 57 AVSVTLGPKGRNVLIDQPFGSPKITKDGVTVARSVSL 93 >SPCC16A11.17 |cdc21|mcm4, SPCC24B10.01|MCM complex subunit Cdc21|Schizosaccharomyces pombe|chr 3|||Manual Length = 911 Score = 27.5 bits (58), Expect = 1.9 Identities = 9/21 (42%), Positives = 15/21 (71%) Frame = -1 Query: 282 ETLQCPQESCGRVNDIQ*LHD 220 E ++CP+E CG N +Q +H+ Sbjct: 344 EPIKCPREVCGATNAMQLIHN 364 >SPAC144.03 |ade2|min10, min3|adenylosuccinate synthetase Ade2|Schizosaccharomyces pombe|chr 1|||Manual Length = 434 Score = 26.6 bits (56), Expect = 3.3 Identities = 19/69 (27%), Positives = 34/69 (49%) Frame = +3 Query: 252 RKTLVDIAKSQDAEVGDGTTSVVILAGEILKRLKPFVEEGVHPRVLIRAVRTASRLAIEK 431 RK + D+ K A D + +I E+ +RLKPFV + V + A+++ R+ +E Sbjct: 175 RKNVADLQKRYGAFEYD-VEAELIRYKELAQRLKPFVIDAV--AFMYEALQSKKRILVEG 231 Query: 432 IKEQAVKID 458 + +D Sbjct: 232 ANALMLDLD 240 >SPBC530.02 |||membrane transporter|Schizosaccharomyces pombe|chr 2|||Manual Length = 541 Score = 26.6 bits (56), Expect = 3.3 Identities = 21/78 (26%), Positives = 38/78 (48%), Gaps = 2/78 (2%) Frame = -3 Query: 613 IMSRGRKWSVQRQDSINNNLREV--ILLLMNQFR*HRVDAHFNRRSLCSSGDLLSIFTAC 440 +++ GRK+ V + D I+NN V + +N+ +DA R+ + S G ++ C Sbjct: 5 LLASGRKFGVVKSDCISNNGVNVKDVGNALNEGVVGAIDA--TRKMVVSLGTVMPEIQKC 62 Query: 439 SLIFSMASLDAVLTALIR 386 + F +S D L+R Sbjct: 63 GVTFEESSEDVSDFYLVR 80 >SPAC1250.01 |snf21|SPAC29A4.21|ATP-dependent DNA helicase Snf21|Schizosaccharomyces pombe|chr 1|||Manual Length = 1199 Score = 26.2 bits (55), Expect = 4.4 Identities = 17/45 (37%), Positives = 24/45 (53%) Frame = +3 Query: 363 EEGVHPRVLIRAVRTASRLAIEKIKEQAVKIDNKSPEEQRDLLLK 497 E+ V +L RA +L I+ QA K DNKS E+R+ L+ Sbjct: 863 EKSVEENILARA---QYKLDIDGKVIQAGKFDNKSTPEEREAFLR 904 >SPCC1620.14c |snf22|SPCC830.01c|ATP-dependent DNA helicase Snf22|Schizosaccharomyces pombe|chr 3|||Manual Length = 1680 Score = 25.8 bits (54), Expect = 5.8 Identities = 16/50 (32%), Positives = 26/50 (52%) Frame = +3 Query: 348 LKPFVEEGVHPRVLIRAVRTASRLAIEKIKEQAVKIDNKSPEEQRDLLLK 497 L+ E+ + +L RA +L ++ QA K DNKS E+R+ L+ Sbjct: 1309 LRLITEKSIEENILSRA---QYKLDLDGKVIQAGKFDNKSTPEEREAFLR 1355 >SPBC3E7.01 |fab1|ste12, SPBC6B1.11c|1-phosphatidylinositol-3-phosphate 5-kinase Fab1 |Schizosaccharomyces pombe|chr 2|||Manual Length = 1932 Score = 25.4 bits (53), Expect = 7.7 Identities = 8/15 (53%), Positives = 13/15 (86%) Frame = +3 Query: 612 IGIKKVPGGALEDSF 656 + IKK+PGG+++D F Sbjct: 525 VKIKKIPGGSIQDCF 539 >SPBC16H5.11c |skb1|rmt5|type II protein arginine N-methyltransferase Skb1|Schizosaccharomyces pombe|chr 2|||Manual Length = 645 Score = 25.4 bits (53), Expect = 7.7 Identities = 17/52 (32%), Positives = 25/52 (48%) Frame = -3 Query: 628 TFLIPIMSRGRKWSVQRQDSINNNLREVILLLMNQFR*HRVDAHFNRRSLCS 473 +++ PIMS + WS R + N ++LMN F D F +SL S Sbjct: 458 SYVTPIMSP-KLWSEARNMNDPNAFERQYVVLMNSFDFLAADDEFRFQSLWS 508 >SPAC1039.11c ||SPAC922.02c|alpha-glucosidase|Schizosaccharomyces pombe|chr 1|||Manual Length = 995 Score = 25.4 bits (53), Expect = 7.7 Identities = 13/28 (46%), Positives = 18/28 (64%) Frame = -1 Query: 528 ISFDDIALMHTSIGDLFVPQATYYQFSQ 445 +SFD I +H SI DL+ Q +QFS+ Sbjct: 116 VSFDSIDRLHVSIQDLYGAQ---FQFSK 140 >SPBC1683.01 |||inorganic phosphate transporter |Schizosaccharomyces pombe|chr 2|||Manual Length = 573 Score = 25.4 bits (53), Expect = 7.7 Identities = 7/15 (46%), Positives = 11/15 (73%) Frame = +3 Query: 159 DGQADCRSQWKGGYI 203 DG+ +C S+WK Y+ Sbjct: 555 DGKVECNSKWKSWYV 569 Database: spombe Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 2,362,478 Number of sequences in database: 5004 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 2,906,945 Number of Sequences: 5004 Number of extensions: 58686 Number of successful extensions: 205 Number of sequences better than 10.0: 18 Number of HSP's better than 10.0 without gapping: 184 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 201 length of database: 2,362,478 effective HSP length: 70 effective length of database: 2,012,198 effective search space used: 315915086 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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