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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060964.seq
         (684 letters)

Database: spombe 
           5004 sequences; 2,362,478 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SPBC25H2.12c |cct7||chaperonin-containing T-complex eta subunit ...   124   1e-29
SPBC106.06 |cct4||chaperonin-containing T-complex delta subunit ...    77   2e-15
SPBC1A4.08c |cct3||chaperonin-containing T-complex gamma subunit...    74   2e-14
SPAC1D4.04 |cct2||chaperonin-containing T-complex beta subunit C...    72   9e-14
SPBC12D12.03 |cct1||chaperonin-containing T-complex alpha subuni...    65   8e-12
SPBC337.05c |cct8||chaperonin-containing T-complex theta subunit...    64   2e-11
SPAC1420.02c |cct5||chaperonin-containing T-complex epsilon subu...    61   2e-10
SPBC646.11 |cct6||chaperonin-containing T-complex zeta subunit C...    52   8e-08
SPAC12G12.04 |hsp60|hsp60|mitochondrial heat shock protein Hsp60...    32   0.067
SPCC16A11.17 |cdc21|mcm4, SPCC24B10.01|MCM complex subunit Cdc21...    27   1.9  
SPAC144.03 |ade2|min10, min3|adenylosuccinate synthetase Ade2|Sc...    27   3.3  
SPBC530.02 |||membrane transporter|Schizosaccharomyces pombe|chr...    27   3.3  
SPAC1250.01 |snf21|SPAC29A4.21|ATP-dependent DNA helicase Snf21|...    26   4.4  
SPCC1620.14c |snf22|SPCC830.01c|ATP-dependent DNA helicase Snf22...    26   5.8  
SPBC3E7.01 |fab1|ste12, SPBC6B1.11c|1-phosphatidylinositol-3-pho...    25   7.7  
SPBC16H5.11c |skb1|rmt5|type II protein arginine N-methyltransfe...    25   7.7  
SPAC1039.11c ||SPAC922.02c|alpha-glucosidase|Schizosaccharomyces...    25   7.7  
SPBC1683.01 |||inorganic phosphate transporter |Schizosaccharomy...    25   7.7  

>SPBC25H2.12c |cct7||chaperonin-containing T-complex eta subunit
           Cct7|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 558

 Score =  124 bits (299), Expect = 1e-29
 Identities = 66/136 (48%), Positives = 85/136 (62%)
 Frame = +3

Query: 246 PCRKTLVDIAKSQDAEVGDGTTSVVILAGEILKRLKPFVEEGVHPRVLIRAVRTASRLAI 425
           P  KTLVDIA++QDAEVGDGTTSVV+ AGE+L+  + FVE+GV   ++IR  R A++LA+
Sbjct: 78  PAAKTLVDIARAQDAEVGDGTTSVVVFAGELLREARTFVEDGVSSHLIIRGYRKAAQLAV 137

Query: 426 EKIKEQAVKIDNKSPEEQRDLLLKCASTRCHRN*FINRRITSXXXXXXXXXXXXXHFLPL 605
            KIKE A+ +D     + RDLL KCAST  +     +                    L  
Sbjct: 138 NKIKEIAIHLDLSDEGKLRDLLTKCASTAMNSKLIRSNSTFFTKMVVDAVLTLDQEDLNE 197

Query: 606 DMIGIKKVPGGALEDS 653
           +MIGIKKVPGGA+EDS
Sbjct: 198 NMIGIKKVPGGAMEDS 213



 Score =  111 bits (268), Expect = 7e-26
 Identities = 52/77 (67%), Positives = 63/77 (81%)
 Frame = +1

Query: 34  QPQILLLREGTDQTQGKPQLVSNINACQLVVDAVRTTLGPRGMDKLIVDHNGKAVISNDG 213
           Q  +++L+EGTD +QG+ QL+SNINAC  V D +RTTLGP G DKL+VD  G+ VISNDG
Sbjct: 7   QIPVIVLKEGTDDSQGRGQLLSNINACVAVQDTIRTTLGPLGADKLMVDDRGEVVISNDG 66

Query: 214 ATIMKLLDIVHPAARLL 264
           ATIMKLLDIVHPAA+ L
Sbjct: 67  ATIMKLLDIVHPAAKTL 83


>SPBC106.06 |cct4||chaperonin-containing T-complex delta subunit
           Cct4|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 527

 Score = 77.0 bits (181), Expect = 2e-15
 Identities = 37/72 (51%), Positives = 53/72 (73%), Gaps = 2/72 (2%)
 Frame = +1

Query: 70  QTQGKPQLV--SNINACQLVVDAVRTTLGPRGMDKLIVDHNGKAVISNDGATIMKLLDIV 243
           Q + KPQ V  SNI A + V DA+RT+LGP+GMDK+I    G+ +++NDGATI+K L ++
Sbjct: 12  QDREKPQEVRLSNIMAARSVADAIRTSLGPKGMDKMIQTGKGEVILTNDGATILKHLSVL 71

Query: 244 HPAARLLWTLQS 279
           HPAA++L  L +
Sbjct: 72  HPAAKMLVDLSA 83



 Score = 69.7 bits (163), Expect = 4e-13
 Identities = 35/88 (39%), Positives = 56/88 (63%)
 Frame = +3

Query: 246 PCRKTLVDIAKSQDAEVGDGTTSVVILAGEILKRLKPFVEEGVHPRVLIRAVRTASRLAI 425
           P  K LVD++ +QD E GDGTTSVVILAG +L   +  +++G+HP V+  + + A+   +
Sbjct: 73  PAAKMLVDLSAAQDVEAGDGTTSVVILAGSMLACAEKLLKKGIHPTVIAESFQRAAGFTV 132

Query: 426 EKIKEQAVKIDNKSPEEQRDLLLKCAST 509
           + +KE A+ I+       R+ LL+ A+T
Sbjct: 133 DCMKENALAIE----LSDRESLLRAATT 156


>SPBC1A4.08c |cct3||chaperonin-containing T-complex gamma subunit
           Cct3|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 528

 Score = 74.1 bits (174), Expect = 2e-14
 Identities = 35/89 (39%), Positives = 55/89 (61%)
 Frame = +3

Query: 246 PCRKTLVDIAKSQDAEVGDGTTSVVILAGEILKRLKPFVEEGVHPRVLIRAVRTASRLAI 425
           P  K+++++A++QD EVGDGTTSV+ILAGEIL    P ++  +HP V+IR+ + A   A+
Sbjct: 73  PAAKSMIELARTQDEEVGDGTTSVIILAGEILAAASPLLDRKIHPVVMIRSFKQALEDAL 132

Query: 426 EKIKEQAVKIDNKSPEEQRDLLLKCASTR 512
             I E  + ++     E   L+  C  T+
Sbjct: 133 SIIDEITLPVNVDDNAEMFRLIRTCIGTK 161



 Score = 64.1 bits (149), Expect = 2e-11
 Identities = 27/76 (35%), Positives = 47/76 (61%)
 Frame = +1

Query: 31  MQPQILLLREGTDQTQGKPQLVSNINACQLVVDAVRTTLGPRGMDKLIVDHNGKAVISND 210
           MQ  + ++    ++  G    +SNI A + V D +RT LGPR M K+++D  G  +++ND
Sbjct: 1   MQSPVFVMNTNGNRQVGHKAQMSNIQAAKAVADVIRTCLGPRAMLKMLLDPVGSVLLTND 60

Query: 211 GATIMKLLDIVHPAAR 258
           G  I++ +++ HPAA+
Sbjct: 61  GHAILREIEVAHPAAK 76


>SPAC1D4.04 |cct2||chaperonin-containing T-complex beta subunit
           Cct2|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 527

 Score = 71.7 bits (168), Expect = 9e-14
 Identities = 49/135 (36%), Positives = 70/135 (51%), Gaps = 1/135 (0%)
 Frame = +3

Query: 255 KTLVDIAKSQDAEVGDGTTSVVILAGEILKRLKPFVEEGVHPRVLIRAVRTASRLAIEKI 434
           K LV+I+K QD EVGDGTTSV + A E+L++ +  V   +HP+V+I   R A++ AI+ +
Sbjct: 78  KVLVNISKVQDDEVGDGTTSVCVFAAELLRQAEIMVNAKIHPQVIIDGYRIATKTAIDAL 137

Query: 435 KEQAVKIDNKS-PEEQRDLLLKCASTRCHRN*FINRRITSXXXXXXXXXXXXXHFLPLDM 611
           +  A  IDN S P + R  L   A T       +++                     LD 
Sbjct: 138 R--ASSIDNSSDPAKFRSDLENIARTTLSSK-ILSQNKNHFAQLAVDAVLRLKGSTNLDN 194

Query: 612 IGIKKVPGGALEDSF 656
           I I K+ GG L+DSF
Sbjct: 195 IQIIKILGGKLDDSF 209



 Score = 53.6 bits (123), Expect = 3e-08
 Identities = 27/80 (33%), Positives = 50/80 (62%), Gaps = 1/80 (1%)
 Frame = +1

Query: 49  LLREGTDQTQGKPQLVSNINACQLVVDAVRTTLGPRGMDKLIVDH-NGKAVISNDGATIM 225
           +  E   Q +G+   +S+      V D V++TLGP+GMDK++  + +G  V++NDGATI+
Sbjct: 8   IFNESGIQERGENARLSSFVGAIAVGDLVKSTLGPKGMDKILQSNSSGDIVVTNDGATIL 67

Query: 226 KLLDIVHPAARLLWTLQSLK 285
           K + + + AA++L  +  ++
Sbjct: 68  KSIALDNAAAKVLVNISKVQ 87


>SPBC12D12.03 |cct1||chaperonin-containing T-complex alpha subunit
           Cct1|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 556

 Score = 65.3 bits (152), Expect = 8e-12
 Identities = 30/61 (49%), Positives = 41/61 (67%)
 Frame = +3

Query: 246 PCRKTLVDIAKSQDAEVGDGTTSVVILAGEILKRLKPFVEEGVHPRVLIRAVRTASRLAI 425
           P  K LV++A+ QD EVGDGTTSVVI+A E+L+R    V+  +HP  +I   R A R A+
Sbjct: 75  PAGKVLVELAQQQDKEVGDGTTSVVIIAAELLRRANELVKNKIHPTTIITGYRLAIREAV 134

Query: 426 E 428
           +
Sbjct: 135 K 135



 Score = 62.9 bits (146), Expect = 4e-11
 Identities = 26/66 (39%), Positives = 44/66 (66%)
 Frame = +1

Query: 67  DQTQGKPQLVSNINACQLVVDAVRTTLGPRGMDKLIVDHNGKAVISNDGATIMKLLDIVH 246
           ++  G+     N+ A   + + V+++LGP G+DK++VD  G   ++NDGATI+ LLD+ H
Sbjct: 15  EKISGEDVRNQNVLATTAIANVVKSSLGPVGLDKMLVDDIGDVTVTNDGATILSLLDVEH 74

Query: 247 PAARLL 264
           PA ++L
Sbjct: 75  PAGKVL 80



 Score = 35.1 bits (77), Expect = 0.010
 Identities = 18/37 (48%), Positives = 23/37 (62%)
 Frame = +2

Query: 479 KRSPIEVCINAMSSKLIHQQKDHFSKIVVDAVLSLDT 589
           K S I V   +MSSK+I    D FS + VDA+LS+ T
Sbjct: 150 KESLINVAKTSMSSKIIGNDSDFFSTMAVDAMLSVKT 186


>SPBC337.05c |cct8||chaperonin-containing T-complex theta subunit
           Cct8 |Schizosaccharomyces pombe|chr 2|||Manual
          Length = 546

 Score = 63.7 bits (148), Expect = 2e-11
 Identities = 29/73 (39%), Positives = 50/73 (68%), Gaps = 1/73 (1%)
 Frame = +1

Query: 49  LLREGTDQTQG-KPQLVSNINACQLVVDAVRTTLGPRGMDKLIVDHNGKAVISNDGATIM 225
           L REG    QG +  ++ N NA + + +  RT+LGP G +K++V+H  +  ++ND ATI+
Sbjct: 13  LFREGYRIMQGVEDAVIRNCNAIRELSEITRTSLGPNGKNKIVVNHLQQTFLTNDAATII 72

Query: 226 KLLDIVHPAARLL 264
           + L+++HPAA+L+
Sbjct: 73  RELEVIHPAAKLV 85



 Score = 42.7 bits (96), Expect = 5e-05
 Identities = 26/95 (27%), Positives = 48/95 (50%), Gaps = 2/95 (2%)
 Frame = +3

Query: 246 PCRKTLVDIAKSQDAEVGDGTTSVVILAGEILKRLKPFVEEGVHPRVLIRAVRTASRLAI 425
           P  K +VD  + Q+ E+GD    VV+  GE+L + +  +  G+ P  + +    A    +
Sbjct: 80  PAAKLVVDATQQQENELGDAANFVVVFTGELLAKAENMIRMGLTPLEIAKGYEMALSHTM 139

Query: 426 EKIKE-QAVKIDN-KSPEEQRDLLLKCASTRCHRN 524
           E ++E  A KI+  +S +E    +  C S++ + N
Sbjct: 140 EVLEEICADKIETVESEKELIKAIRTCISSKQYGN 174


>SPAC1420.02c |cct5||chaperonin-containing T-complex epsilon subunit
           Cct5|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 546

 Score = 60.9 bits (141), Expect = 2e-10
 Identities = 27/70 (38%), Positives = 47/70 (67%)
 Frame = +1

Query: 55  REGTDQTQGKPQLVSNINACQLVVDAVRTTLGPRGMDKLIVDHNGKAVISNDGATIMKLL 234
           +E   +  G   + S+I A + V + VRT+LGPRG+DK+++  +G+  ++NDGATI+  +
Sbjct: 24  QEKKRRLHGIDAVKSHILATKTVANIVRTSLGPRGLDKILISPDGEITVTNDGATILDQM 83

Query: 235 DIVHPAARLL 264
           ++ H  A+LL
Sbjct: 84  EVEHQIAKLL 93



 Score = 60.5 bits (140), Expect = 2e-10
 Identities = 29/78 (37%), Positives = 50/78 (64%)
 Frame = +3

Query: 255 KTLVDIAKSQDAEVGDGTTSVVILAGEILKRLKPFVEEGVHPRVLIRAVRTASRLAIEKI 434
           K LV ++KSQD E+GDGTT VV+LAG +L++ +  +++G+HP  +      A ++A++ +
Sbjct: 91  KLLVQLSKSQDDEIGDGTTGVVVLAGALLEQAEALIDKGIHPIRIADGYEKACQVAVKHL 150

Query: 435 KEQAVKIDNKSPEEQRDL 488
              +  +D  SPE   +L
Sbjct: 151 DAISDVVD-FSPENTTNL 167



 Score = 30.7 bits (66), Expect = 0.20
 Identities = 12/25 (48%), Positives = 19/25 (76%)
 Frame = +2

Query: 509 AMSSKLIHQQKDHFSKIVVDAVLSL 583
           ++ SK++ +  DHF+ I VDAVLS+
Sbjct: 174 SLGSKVVSKAHDHFANIAVDAVLSV 198


>SPBC646.11 |cct6||chaperonin-containing T-complex zeta subunit
           Cct6|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 535

 Score = 52.0 bits (119), Expect = 8e-08
 Identities = 30/90 (33%), Positives = 48/90 (53%)
 Frame = +3

Query: 240 RSPCRKTLVDIAKSQDAEVGDGTTSVVILAGEILKRLKPFVEEGVHPRVLIRAVRTASRL 419
           ++P    +   A +QD   GDGTTSV +L GE+LK+ + ++ EG+HP ++      A   
Sbjct: 68  QNPTASCIAKAATAQDDATGDGTTSVCLLVGELLKQAELYIREGLHPSLISDGFNLAKNE 127

Query: 420 AIEKIKEQAVKIDNKSPEEQRDLLLKCAST 509
           A+  +   + K D    E  R++LL  A T
Sbjct: 128 ALTFL--DSFKTDF---EVDREVLLNVAKT 152



 Score = 40.3 bits (90), Expect = 3e-04
 Identities = 21/69 (30%), Positives = 35/69 (50%)
 Frame = +1

Query: 49  LLREGTDQTQGKPQLVSNINACQLVVDAVRTTLGPRGMDKLIVDHNGKAVISNDGATIMK 228
           LL    +  Q    L  NI+A   + D +++ LGP G  K++VD  G   ++ DG  ++ 
Sbjct: 4   LLNPKAESIQRAQALQVNISAAIGLQDVLKSNLGPTGTTKMLVDGAGAIKLTKDGKVLLT 63

Query: 229 LLDIVHPAA 255
            + I +P A
Sbjct: 64  EMQIQNPTA 72


>SPAC12G12.04 |hsp60|hsp60|mitochondrial heat shock protein
           Hsp60|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 582

 Score = 32.3 bits (70), Expect = 0.067
 Identities = 22/70 (31%), Positives = 32/70 (45%)
 Frame = +3

Query: 267 DIAKSQDAEVGDGTTSVVILAGEILKRLKPFVEEGVHPRVLIRAVRTASRLAIEKIKEQA 446
           D+A   +   GDGTT+  +L   I       V  G +P  L R ++ A    +E +  QA
Sbjct: 107 DVASKTNEVAGDGTTTATVLTRAIFSETVRNVAAGCNPMDLRRGIQLAVDNVVEFL--QA 164

Query: 447 VKIDNKSPEE 476
            K D  + EE
Sbjct: 165 NKRDITTSEE 174



 Score = 30.3 bits (65), Expect = 0.27
 Identities = 14/37 (37%), Positives = 21/37 (56%)
 Frame = +1

Query: 130 AVRTTLGPRGMDKLIVDHNGKAVISNDGATIMKLLDI 240
           AV  TLGP+G + LI    G   I+ DG T+ + + +
Sbjct: 57  AVSVTLGPKGRNVLIDQPFGSPKITKDGVTVARSVSL 93


>SPCC16A11.17 |cdc21|mcm4, SPCC24B10.01|MCM complex subunit
           Cdc21|Schizosaccharomyces pombe|chr 3|||Manual
          Length = 911

 Score = 27.5 bits (58), Expect = 1.9
 Identities = 9/21 (42%), Positives = 15/21 (71%)
 Frame = -1

Query: 282 ETLQCPQESCGRVNDIQ*LHD 220
           E ++CP+E CG  N +Q +H+
Sbjct: 344 EPIKCPREVCGATNAMQLIHN 364


>SPAC144.03 |ade2|min10, min3|adenylosuccinate synthetase
           Ade2|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 434

 Score = 26.6 bits (56), Expect = 3.3
 Identities = 19/69 (27%), Positives = 34/69 (49%)
 Frame = +3

Query: 252 RKTLVDIAKSQDAEVGDGTTSVVILAGEILKRLKPFVEEGVHPRVLIRAVRTASRLAIEK 431
           RK + D+ K   A   D   + +I   E+ +RLKPFV + V    +  A+++  R+ +E 
Sbjct: 175 RKNVADLQKRYGAFEYD-VEAELIRYKELAQRLKPFVIDAV--AFMYEALQSKKRILVEG 231

Query: 432 IKEQAVKID 458
                + +D
Sbjct: 232 ANALMLDLD 240


>SPBC530.02 |||membrane transporter|Schizosaccharomyces pombe|chr
           2|||Manual
          Length = 541

 Score = 26.6 bits (56), Expect = 3.3
 Identities = 21/78 (26%), Positives = 38/78 (48%), Gaps = 2/78 (2%)
 Frame = -3

Query: 613 IMSRGRKWSVQRQDSINNNLREV--ILLLMNQFR*HRVDAHFNRRSLCSSGDLLSIFTAC 440
           +++ GRK+ V + D I+NN   V  +   +N+     +DA   R+ + S G ++     C
Sbjct: 5   LLASGRKFGVVKSDCISNNGVNVKDVGNALNEGVVGAIDA--TRKMVVSLGTVMPEIQKC 62

Query: 439 SLIFSMASLDAVLTALIR 386
            + F  +S D     L+R
Sbjct: 63  GVTFEESSEDVSDFYLVR 80


>SPAC1250.01 |snf21|SPAC29A4.21|ATP-dependent DNA helicase
           Snf21|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 1199

 Score = 26.2 bits (55), Expect = 4.4
 Identities = 17/45 (37%), Positives = 24/45 (53%)
 Frame = +3

Query: 363 EEGVHPRVLIRAVRTASRLAIEKIKEQAVKIDNKSPEEQRDLLLK 497
           E+ V   +L RA     +L I+    QA K DNKS  E+R+  L+
Sbjct: 863 EKSVEENILARA---QYKLDIDGKVIQAGKFDNKSTPEEREAFLR 904


>SPCC1620.14c |snf22|SPCC830.01c|ATP-dependent DNA helicase
            Snf22|Schizosaccharomyces pombe|chr 3|||Manual
          Length = 1680

 Score = 25.8 bits (54), Expect = 5.8
 Identities = 16/50 (32%), Positives = 26/50 (52%)
 Frame = +3

Query: 348  LKPFVEEGVHPRVLIRAVRTASRLAIEKIKEQAVKIDNKSPEEQRDLLLK 497
            L+   E+ +   +L RA     +L ++    QA K DNKS  E+R+  L+
Sbjct: 1309 LRLITEKSIEENILSRA---QYKLDLDGKVIQAGKFDNKSTPEEREAFLR 1355


>SPBC3E7.01 |fab1|ste12,
           SPBC6B1.11c|1-phosphatidylinositol-3-phosphate 5-kinase
           Fab1 |Schizosaccharomyces pombe|chr 2|||Manual
          Length = 1932

 Score = 25.4 bits (53), Expect = 7.7
 Identities = 8/15 (53%), Positives = 13/15 (86%)
 Frame = +3

Query: 612 IGIKKVPGGALEDSF 656
           + IKK+PGG+++D F
Sbjct: 525 VKIKKIPGGSIQDCF 539


>SPBC16H5.11c |skb1|rmt5|type II protein arginine
           N-methyltransferase Skb1|Schizosaccharomyces pombe|chr
           2|||Manual
          Length = 645

 Score = 25.4 bits (53), Expect = 7.7
 Identities = 17/52 (32%), Positives = 25/52 (48%)
 Frame = -3

Query: 628 TFLIPIMSRGRKWSVQRQDSINNNLREVILLLMNQFR*HRVDAHFNRRSLCS 473
           +++ PIMS  + WS  R  +  N      ++LMN F     D  F  +SL S
Sbjct: 458 SYVTPIMSP-KLWSEARNMNDPNAFERQYVVLMNSFDFLAADDEFRFQSLWS 508


>SPAC1039.11c ||SPAC922.02c|alpha-glucosidase|Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 995

 Score = 25.4 bits (53), Expect = 7.7
 Identities = 13/28 (46%), Positives = 18/28 (64%)
 Frame = -1

Query: 528 ISFDDIALMHTSIGDLFVPQATYYQFSQ 445
           +SFD I  +H SI DL+  Q   +QFS+
Sbjct: 116 VSFDSIDRLHVSIQDLYGAQ---FQFSK 140


>SPBC1683.01 |||inorganic phosphate transporter |Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 573

 Score = 25.4 bits (53), Expect = 7.7
 Identities = 7/15 (46%), Positives = 11/15 (73%)
 Frame = +3

Query: 159 DGQADCRSQWKGGYI 203
           DG+ +C S+WK  Y+
Sbjct: 555 DGKVECNSKWKSWYV 569


  Database: spombe
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 2,362,478
  Number of sequences in database:  5004
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,906,945
Number of Sequences: 5004
Number of extensions: 58686
Number of successful extensions: 205
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 184
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 201
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 315915086
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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