Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060962.seq
         (728 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659249-1|ABG47447.1|  383|Tribolium castaneum chitinase 9 prot...    23   2.5  
AY873915-1|AAW67571.2|  384|Tribolium castaneum chitinase 16 pro...    23   2.5  
AY873914-1|AAW67570.1|  384|Tribolium castaneum chitinase 3 prot...    23   2.5  
AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembran...    23   3.3  
AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembran...    23   3.3  
AM292349-1|CAL23161.1|  248|Tribolium castaneum gustatory recept...    22   4.4  
X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.       21   7.7  
AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head orthol...    21   7.7  

>DQ659249-1|ABG47447.1|  383|Tribolium castaneum chitinase 9
           protein.
          Length = 383

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = -2

Query: 514 IGYNHIQHLFSEW 476
           IGYN +  L+S+W
Sbjct: 298 IGYNEVCELYSDW 310


>AY873915-1|AAW67571.2|  384|Tribolium castaneum chitinase 16
           protein.
          Length = 384

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = -2

Query: 514 IGYNHIQHLFSEW 476
           IGYN +  L+S+W
Sbjct: 299 IGYNEVCELYSDW 311


>AY873914-1|AAW67570.1|  384|Tribolium castaneum chitinase 3
           protein.
          Length = 384

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = -2

Query: 514 IGYNHIQHLFSEW 476
           IGYN +  L+S+W
Sbjct: 299 IGYNEVCELYSDW 311


>AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembrane
           transporter protein.
          Length = 669

 Score = 22.6 bits (46), Expect = 3.3
 Identities = 10/33 (30%), Positives = 19/33 (57%)
 Frame = +1

Query: 253 HASEPDYILKKGDLAKIDLGAHIDGFIAVVAHT 351
           H SE D+++    LA + +G  +  F+A++  T
Sbjct: 633 HFSEADFVMDVVMLAVLIVGFRLVAFLALLVKT 665


>AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembrane
           transporter white protein.
          Length = 669

 Score = 22.6 bits (46), Expect = 3.3
 Identities = 10/33 (30%), Positives = 19/33 (57%)
 Frame = +1

Query: 253 HASEPDYILKKGDLAKIDLGAHIDGFIAVVAHT 351
           H SE D+++    LA + +G  +  F+A++  T
Sbjct: 633 HFSEADFVMDVVMLAVLIVGFRLVAFLALLVKT 665


>AM292349-1|CAL23161.1|  248|Tribolium castaneum gustatory receptor
           candidate 28 protein.
          Length = 248

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 9/28 (32%), Positives = 13/28 (46%)
 Frame = +3

Query: 195 KALHFQHAFL*TTAFVTFRPCERTGLHS 278
           K    +H      AF+T + CE   L+S
Sbjct: 190 KVFPVEHLLFIANAFITSQSCENATLYS 217


>X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.
          Length = 524

 Score = 21.4 bits (43), Expect = 7.7
 Identities = 7/28 (25%), Positives = 14/28 (50%)
 Frame = +1

Query: 196 RHCIFNMRFCEQLHLSLFAHASEPDYIL 279
           R C +  ++C  L + L  +   P+ +L
Sbjct: 290 RDCSYATKYCHSLKIHLRRYGHTPNVVL 317


>AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head
           orthologue protein.
          Length = 431

 Score = 21.4 bits (43), Expect = 7.7
 Identities = 7/18 (38%), Positives = 12/18 (66%)
 Frame = +1

Query: 580 IHQKHSVKNMKKQHLKSM 633
           +HQ+H  +NM  + L +M
Sbjct: 313 MHQQHHQQNMSHEELSAM 330


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 169,483
Number of Sequences: 336
Number of extensions: 3418
Number of successful extensions: 12
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19467635
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)