Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060864.seq
         (673 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014134-756|AAN10358.4| 23015|Drosophila melanogaster CG33196-P...    32   0.62 
AY118397-1|AAM48426.1|  150|Drosophila melanogaster RE57454p pro...    31   1.9  
AE014134-1598|AAF52740.2|  150|Drosophila melanogaster CG13102-P...    31   1.9  

>AE014134-756|AAN10358.4| 23015|Drosophila melanogaster CG33196-PB
             protein.
          Length = 23015

 Score = 32.3 bits (70), Expect = 0.62
 Identities = 16/56 (28%), Positives = 27/56 (48%)
 Frame = -3

Query: 485   SCLKFLIGYDDSIIVSIRISNKCCYKTSTMKCVTCKTSRQCAK*CSVNSVCEVYSH 318
             SC++  IG   +      ++ +C    S   C   + +  CAK C +N+ CEV +H
Sbjct: 12326 SCMETFIGAPPNCKPECTVNAEC---PSNRACHKFRCANPCAKTCGLNAKCEVINH 12378



 Score = 32.3 bits (70), Expect = 0.62
 Identities = 18/57 (31%), Positives = 26/57 (45%)
 Frame = -3

Query: 485   SCLKFLIGYDDSIIVSIRISNKCCYKTSTMKCVTCKTSRQCAK*CSVNSVCEVYSHT 315
             SCL   IG   +      I+++C    S + C+  K    C   C  N+VC V +HT
Sbjct: 13714 SCLVNFIGQAPNCRPECTINSEC---PSQLACINQKCRDPCPGACGQNAVCSVINHT 13767



 Score = 30.3 bits (65), Expect = 2.5
 Identities = 17/57 (29%), Positives = 27/57 (47%)
 Frame = -3

Query: 485   SCLKFLIGYDDSIIVSIRISNKCCYKTSTMKCVTCKTSRQCAK*CSVNSVCEVYSHT 315
             SCL+  IG          +S++C   ++   CV  K    CA  C + + CEV +H+
Sbjct: 12007 SCLEGYIGAPPQCRPECVVSSEC---SALQACVNKKCVDPCAAACGLEARCEVINHS 12060



 Score = 30.3 bits (65), Expect = 2.5
 Identities = 11/32 (34%), Positives = 16/32 (50%)
 Frame = -3

Query: 404   STMKCVTCKTSRQCAK*CSVNSVCEVYSHTLA 309
             ST  C+  K S  C + C  N+ C V  H ++
Sbjct: 12141 STQACINNKCSNPCPESCGTNAECRVIGHAVS 12172



 Score = 30.3 bits (65), Expect = 2.5
 Identities = 17/57 (29%), Positives = 25/57 (43%)
 Frame = -3

Query: 485   SCLKFLIGYDDSIIVSIRISNKCCYKTSTMKCVTCKTSRQCAK*CSVNSVCEVYSHT 315
             SCL   IG   +     RI+ +C    S+  C+  K    C   C   ++C V +HT
Sbjct: 14985 SCLVGYIGAPPNCRPECRINAEC---PSSQACINEKCRDPCPGSCGYGAICNVINHT 15038



 Score = 29.1 bits (62), Expect = 5.8
 Identities = 17/57 (29%), Positives = 25/57 (43%)
 Frame = -3

Query: 485   SCLKFLIGYDDSIIVSIRISNKCCYKTSTMKCVTCKTSRQCAK*CSVNSVCEVYSHT 315
             SCL   +G   +      ISN  C   +   C+  K    C   C  N++C V+SH+
Sbjct: 14027 SCLPEFVGAPPNCRPEC-ISNSEC--PTNQACINQKCVDPCPGLCGQNAICRVFSHS 14080



 Score = 28.7 bits (61), Expect = 7.6
 Identities = 14/57 (24%), Positives = 26/57 (45%)
 Frame = -3

Query: 485   SCLKFLIGYDDSIIVSIRISNKCCYKTSTMKCVTCKTSRQCAK*CSVNSVCEVYSHT 315
             SCL+  IG   +      +S +C    +   C++ +    C   C +N+ C V +H+
Sbjct: 12967 SCLELYIGLPPNCRPECVLSTEC---PTDKACISQRCQDPCPGTCGINAECRVRNHS 13020


>AY118397-1|AAM48426.1|  150|Drosophila melanogaster RE57454p
           protein.
          Length = 150

 Score = 30.7 bits (66), Expect = 1.9
 Identities = 12/33 (36%), Positives = 19/33 (57%)
 Frame = -3

Query: 461 YDDSIIVSIRISNKCCYKTSTMKCVTCKTSRQC 363
           Y  ++IVSI ++  C     ++KC TC T + C
Sbjct: 2   YMKALIVSILVAFVCVQIADSLKCYTCVTPKDC 34


>AE014134-1598|AAF52740.2|  150|Drosophila melanogaster CG13102-PA
           protein.
          Length = 150

 Score = 30.7 bits (66), Expect = 1.9
 Identities = 12/33 (36%), Positives = 19/33 (57%)
 Frame = -3

Query: 461 YDDSIIVSIRISNKCCYKTSTMKCVTCKTSRQC 363
           Y  ++IVSI ++  C     ++KC TC T + C
Sbjct: 2   YMKALIVSILVAFVCVQIADSLKCYTCVTPKDC 34


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,474,272
Number of Sequences: 53049
Number of extensions: 452796
Number of successful extensions: 997
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 912
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 997
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2910007350
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)