Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060862.seq
         (658 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    23   1.7  
EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D pro...    23   2.2  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    23   2.2  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    23   2.2  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    23   2.2  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    23   2.2  
AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory recept...    22   5.1  
EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B pro...    21   8.9  
AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory recept...    21   8.9  
AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory recept...    21   8.9  

>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 23.4 bits (48), Expect = 1.7
 Identities = 9/25 (36%), Positives = 13/25 (52%)
 Frame = -1

Query: 382  YYFQNVSSLETRLRKNHVFWCLDWC 308
            YY  N   L+ ++  N +FW  D C
Sbjct: 2252 YYLCNQGQLQLQVCPNGLFWNKDHC 2276


>EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D
           protein.
          Length = 255

 Score = 23.0 bits (47), Expect = 2.2
 Identities = 8/21 (38%), Positives = 9/21 (42%)
 Frame = +1

Query: 277 PSRSDDIGTQYTNPNTKRHGF 339
           P   DD      NP  K+H F
Sbjct: 218 PEEDDDSNIPQNNPKNKQHNF 238


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 23.0 bits (47), Expect = 2.2
 Identities = 8/30 (26%), Positives = 15/30 (50%)
 Frame = -1

Query: 520 VPVSIFLGKAGCWHCSLRHYSVVSLVNHSG 431
           +P++IFL   G W   +  +S +  +   G
Sbjct: 256 IPIAIFLVSLGWWENYISRHSPIPFIKKLG 285


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 23.0 bits (47), Expect = 2.2
 Identities = 8/30 (26%), Positives = 15/30 (50%)
 Frame = -1

Query: 520 VPVSIFLGKAGCWHCSLRHYSVVSLVNHSG 431
           +P++IFL   G W   +  +S +  +   G
Sbjct: 256 IPIAIFLVSLGWWENYISRHSPIPFIKKLG 285


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 23.0 bits (47), Expect = 2.2
 Identities = 8/30 (26%), Positives = 15/30 (50%)
 Frame = -1

Query: 520 VPVSIFLGKAGCWHCSLRHYSVVSLVNHSG 431
           +P++IFL   G W   +  +S +  +   G
Sbjct: 256 IPIAIFLVSLGWWENYISRHSPIPFIKKLG 285


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 23.0 bits (47), Expect = 2.2
 Identities = 8/30 (26%), Positives = 15/30 (50%)
 Frame = -1

Query: 520 VPVSIFLGKAGCWHCSLRHYSVVSLVNHSG 431
           +P++IFL   G W   +  +S +  +   G
Sbjct: 256 IPIAIFLVSLGWWENYISRHSPIPFIKKLG 285


>AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory receptor
           candidate 42 protein.
          Length = 347

 Score = 21.8 bits (44), Expect = 5.1
 Identities = 13/57 (22%), Positives = 26/57 (45%)
 Frame = -1

Query: 184 LTVPRVGLSTMNVCKPFKTRVRCDSVVVKKESNLNEQYLIRSLSKYRM*KVQEFLRI 14
           + V  VG++ M         + CD+V+ + ++ L   Y IR +       + EF+ +
Sbjct: 249 VVVANVGVAFMINVGTVTLILSCDAVLEEVKTTLLLAYKIRQVFPNEKKNISEFINV 305


>EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B
           protein.
          Length = 279

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 10/28 (35%), Positives = 15/28 (53%)
 Frame = +1

Query: 268 ITCPSRSDDIGTQYTNPNTKRHGFFANE 351
           I C SR      Q +    ++HG+FA+E
Sbjct: 90  IDCTSRPKLQEPQPSQHCPRKHGYFAHE 117


>AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory receptor
           candidate 49 protein.
          Length = 418

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 8/15 (53%), Positives = 9/15 (60%)
 Frame = -2

Query: 642 GFFMRINGPCLFFPF 598
           G F  I G  LF+PF
Sbjct: 164 GLFALITGNVLFYPF 178


>AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory receptor
           candidate 14 protein.
          Length = 374

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 8/15 (53%), Positives = 9/15 (60%)
 Frame = -2

Query: 642 GFFMRINGPCLFFPF 598
           G F  I G  LF+PF
Sbjct: 120 GLFALITGNVLFYPF 134


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 139,232
Number of Sequences: 336
Number of extensions: 2804
Number of successful extensions: 10
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16969115
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)